HEADER VIRAL PROTEIN 29-JUN-22 8DIP TITLE THE CRYSTAL STRUCTURE OF I38T MUTANT PA ENDONUCLEASE TITLE 2 (2009/H1N1/CALIFORNIA) IN COMPLEX WITH COMPOUND SJ001023030 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN PA-X; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS; SOURCE 3 ORGANISM_TAXID: 11320; SOURCE 4 GENE: PA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NUCLEASE, INFLUENZA, INHIBITOR RESISTANCE, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.G.CUYPERS,J.P.SLAVISH,Z.RANKOVIC,S.W.WHITE REVDAT 2 25-OCT-23 8DIP 1 REMARK REVDAT 1 29-MAR-23 8DIP 0 JRNL AUTH P.J.SLAVISH,M.G.CUYPERS,M.A.RIMMER,A.ABDOLVAHABI,T.JEEVAN, JRNL AUTH 2 G.KUMAR,J.A.JARUSIEWICZ,S.VAITHIYALINGAM,J.C.JONES, JRNL AUTH 3 J.J.BOWLING,J.E.PRICE,R.M.DUBOIS,J.MIN,R.J.WEBBY,Z.RANKOVIC, JRNL AUTH 4 S.W.WHITE JRNL TITL CHEMICAL SCAFFOLD RECYCLING: STRUCTURE-GUIDED CONVERSION OF JRNL TITL 2 AN HIV INTEGRASE INHIBITOR INTO A POTENT INFLUENZA VIRUS JRNL TITL 3 RNA-DEPENDENT RNA POLYMERASE INHIBITOR DESIGNED TO MINIMIZE JRNL TITL 4 RESISTANCE POTENTIAL. JRNL REF EUR.J.MED.CHEM. V. 247 15035 2023 JRNL REFN ISSN 0223-5234 JRNL PMID 36603507 JRNL DOI 10.1016/J.EJMECH.2022.115035 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.98 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 9590 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.230 REMARK 3 R VALUE (WORKING SET) : 0.228 REMARK 3 FREE R VALUE : 0.270 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.260 REMARK 3 FREE R VALUE TEST SET COUNT : 504 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.9800 - 3.9700 0.97 2349 125 0.1919 0.2268 REMARK 3 2 3.9700 - 3.1500 0.98 2243 145 0.2412 0.2909 REMARK 3 3 3.1500 - 2.7500 0.99 2246 118 0.3014 0.3852 REMARK 3 4 2.7500 - 2.5000 0.99 2248 116 0.3570 0.3993 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.523 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 37.199 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 61.01 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 87.19 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 1546 REMARK 3 ANGLE : 0.642 2092 REMARK 3 CHIRALITY : 0.039 218 REMARK 3 PLANARITY : 0.004 265 REMARK 3 DIHEDRAL : 12.437 224 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -1 THROUGH 23 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.8242 22.7883 4.4133 REMARK 3 T TENSOR REMARK 3 T11: 0.9599 T22: 0.6356 REMARK 3 T33: 0.6879 T12: -0.1498 REMARK 3 T13: -0.2416 T23: 0.0213 REMARK 3 L TENSOR REMARK 3 L11: 4.2986 L22: 3.1233 REMARK 3 L33: 4.3420 L12: -0.6691 REMARK 3 L13: -3.6500 L23: 1.3879 REMARK 3 S TENSOR REMARK 3 S11: 0.3087 S12: 1.7316 S13: -0.6165 REMARK 3 S21: -0.3862 S22: -0.5726 S23: 0.1879 REMARK 3 S31: -1.0115 S32: -0.1804 S33: 0.1403 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 24 THROUGH 31 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.8176 33.1971 3.4188 REMARK 3 T TENSOR REMARK 3 T11: 1.5129 T22: 1.1079 REMARK 3 T33: 1.1145 T12: -0.0063 REMARK 3 T13: -0.3694 T23: 0.0776 REMARK 3 L TENSOR REMARK 3 L11: 0.9250 L22: 8.4886 REMARK 3 L33: 6.3617 L12: 1.1205 REMARK 3 L13: -1.3181 L23: 2.1950 REMARK 3 S TENSOR REMARK 3 S11: -0.4988 S12: -0.3857 S13: 1.8868 REMARK 3 S21: -0.1126 S22: 0.2323 S23: 0.5983 REMARK 3 S31: -2.2271 S32: -0.1517 S33: 0.2837 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 32 THROUGH 98 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.7783 21.8016 17.2187 REMARK 3 T TENSOR REMARK 3 T11: 0.7566 T22: 0.6621 REMARK 3 T33: 0.6990 T12: 0.0077 REMARK 3 T13: -0.2053 T23: -0.1359 REMARK 3 L TENSOR REMARK 3 L11: 4.1160 L22: 1.8547 REMARK 3 L33: 2.8472 L12: 0.2800 REMARK 3 L13: -1.4114 L23: 0.4510 REMARK 3 S TENSOR REMARK 3 S11: -0.1805 S12: -0.0597 S13: -0.0465 REMARK 3 S21: 0.4736 S22: -0.1946 S23: 0.0155 REMARK 3 S31: -0.4932 S32: -0.6932 S33: 0.3866 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 99 THROUGH 115 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.4158 24.7854 25.8256 REMARK 3 T TENSOR REMARK 3 T11: 0.9823 T22: 0.7596 REMARK 3 T33: 0.7302 T12: -0.0687 REMARK 3 T13: -0.1619 T23: -0.2412 REMARK 3 L TENSOR REMARK 3 L11: 5.1548 L22: 3.4358 REMARK 3 L33: 2.5529 L12: -2.8060 REMARK 3 L13: -2.0451 L23: 1.6698 REMARK 3 S TENSOR REMARK 3 S11: -0.0908 S12: -1.0540 S13: 0.3212 REMARK 3 S21: 0.9108 S22: -0.3181 S23: 0.0609 REMARK 3 S31: -1.1970 S32: 1.4085 S33: -0.1154 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 116 THROUGH 137 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.2363 30.4092 25.5528 REMARK 3 T TENSOR REMARK 3 T11: 1.4126 T22: 0.7947 REMARK 3 T33: 0.8420 T12: -0.2735 REMARK 3 T13: -0.3159 T23: -0.2010 REMARK 3 L TENSOR REMARK 3 L11: 4.4022 L22: 2.2731 REMARK 3 L33: 4.6133 L12: -1.6829 REMARK 3 L13: -1.8329 L23: 1.5369 REMARK 3 S TENSOR REMARK 3 S11: 0.5526 S12: -0.8494 S13: 0.6884 REMARK 3 S21: 0.9586 S22: -0.2066 S23: -0.4385 REMARK 3 S31: -1.1818 S32: 0.5505 S33: -0.3355 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 138 THROUGH 195 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.0298 22.7464 22.3233 REMARK 3 T TENSOR REMARK 3 T11: 0.8205 T22: 0.6941 REMARK 3 T33: 0.7666 T12: -0.2118 REMARK 3 T13: -0.3196 T23: -0.0410 REMARK 3 L TENSOR REMARK 3 L11: 5.5695 L22: 0.8409 REMARK 3 L33: 3.4394 L12: -0.8758 REMARK 3 L13: -1.3312 L23: 0.3703 REMARK 3 S TENSOR REMARK 3 S11: -0.0108 S12: -0.5870 S13: 0.2778 REMARK 3 S21: 0.3998 S22: -0.1354 S23: -0.3594 REMARK 3 S31: -0.9870 S32: 0.4196 S33: 0.2268 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8DIP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-JUN-22. REMARK 100 THE DEPOSITION ID IS D_1000266731. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-APR-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9604 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 74.340 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.10 REMARK 200 R MERGE FOR SHELL (I) : 0.68400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 5VPT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.89 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES PH 7.8, 1 M AMMONIUM REMARK 280 SULFATE, 10 MM MNCL2, 10 MM MGCL2, 0.5% PVP K15, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 44.65800 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 44.65800 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 67.06050 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 44.65800 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 44.65800 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 67.06050 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 44.65800 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 44.65800 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 67.06050 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 44.65800 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 44.65800 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 67.06050 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 44.65800 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 44.65800 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 67.06050 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 44.65800 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 44.65800 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 67.06050 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 44.65800 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 44.65800 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 67.06050 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 44.65800 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 44.65800 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 67.06050 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A 196 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A -3 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 15 CD OE1 OE2 REMARK 470 LYS A 19 CD CE NZ REMARK 470 LYS A 34 NZ REMARK 470 LYS A 73 CG CD CE NZ REMARK 470 ARG A 84 NE CZ NH1 NH2 REMARK 470 LYS A 104 CG CD CE NZ REMARK 470 LEU A 132 CG CD1 CD2 REMARK 470 LYS A 134 CG CD CE NZ REMARK 470 ASN A 136 CG OD1 ND2 REMARK 470 LYS A 137 NZ REMARK 470 ILE A 138 CG1 CG2 CD1 REMARK 470 LYS A 139 CG CD CE NZ REMARK 470 SER A 140 OG REMARK 470 GLU A 141 CG CD OE1 OE2 REMARK 470 LYS A 142 CG CD CE NZ REMARK 470 ARG A 170 CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 104 -73.22 -61.50 REMARK 500 ILE A 138 75.28 -116.04 REMARK 500 SER A 140 85.16 -69.29 REMARK 500 GLU A 141 35.18 -74.06 REMARK 500 MET A 155 114.80 -169.73 REMARK 500 ALA A 159 16.73 56.46 REMARK 500 THR A 162 -65.42 66.57 REMARK 500 SER A 194 -26.78 -147.25 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 QQ4 A 203 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 201 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 41 NE2 REMARK 620 2 ASP A 108 OD2 100.8 REMARK 620 3 GLU A 119 OE2 168.0 87.5 REMARK 620 4 ILE A 120 O 89.6 95.5 80.8 REMARK 620 5 SE9 A 204 O13 102.3 107.0 83.3 151.8 REMARK 620 6 SE9 A 204 O15 71.4 170.1 99.4 78.7 81.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 202 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 80 OE1 REMARK 620 2 ASP A 108 OD1 82.8 REMARK 620 3 SE9 A 204 O10 107.2 157.6 REMARK 620 4 SE9 A 204 O13 124.1 86.2 71.5 REMARK 620 N 1 2 3 DBREF 8DIP A 1 50 UNP C6H0Y9 C6H0Y9_9INFA 1 50 DBREF 8DIP A 73 196 UNP C6H0Y9 C6H0Y9_9INFA 73 196 SEQADV 8DIP MET A -19 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DIP GLY A -18 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DIP SER A -17 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DIP SER A -16 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DIP HIS A -15 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DIP HIS A -14 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DIP HIS A -13 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DIP HIS A -12 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DIP HIS A -11 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DIP HIS A -10 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DIP SER A -9 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DIP SER A -8 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DIP GLY A -7 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DIP LEU A -6 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DIP VAL A -5 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DIP PRO A -4 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DIP ARG A -3 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DIP GLY A -2 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DIP SER A -1 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DIP HIS A 0 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DIP THR A 38 UNP C6H0Y9 ILE 38 ENGINEERED MUTATION SEQADV 8DIP GLY A 51 UNP C6H0Y9 LINKER SEQADV 8DIP GLY A 52 UNP C6H0Y9 LINKER SEQADV 8DIP SER A 53 UNP C6H0Y9 LINKER SEQRES 1 A 197 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 197 LEU VAL PRO ARG GLY SER HIS MET GLU ASP PHE VAL ARG SEQRES 3 A 197 GLN CYS PHE ASN PRO MET ILE VAL GLU LEU ALA GLU LYS SEQRES 4 A 197 ALA MET LYS GLU TYR GLY GLU ASP PRO LYS ILE GLU THR SEQRES 5 A 197 ASN LYS PHE ALA ALA THR CYS THR HIS LEU GLU VAL CYS SEQRES 6 A 197 PHE MET TYR SER ASP GLY GLY SER LYS HIS ARG PHE GLU SEQRES 7 A 197 ILE ILE GLU GLY ARG ASP ARG ILE MET ALA TRP THR VAL SEQRES 8 A 197 VAL ASN SER ILE CYS ASN THR THR GLY VAL GLU LYS PRO SEQRES 9 A 197 LYS PHE LEU PRO ASP LEU TYR ASP TYR LYS GLU ASN ARG SEQRES 10 A 197 PHE ILE GLU ILE GLY VAL THR ARG ARG GLU VAL HIS ILE SEQRES 11 A 197 TYR TYR LEU GLU LYS ALA ASN LYS ILE LYS SER GLU LYS SEQRES 12 A 197 THR HIS ILE HIS ILE PHE SER PHE THR GLY GLU GLU MET SEQRES 13 A 197 ALA THR LYS ALA ASP TYR THR LEU ASP GLU GLU SER ARG SEQRES 14 A 197 ALA ARG ILE LYS THR ARG LEU PHE THR ILE ARG GLN GLU SEQRES 15 A 197 MET ALA SER ARG SER LEU TRP ASP SER PHE ARG GLN SER SEQRES 16 A 197 GLU ARG HET MN A 201 1 HET MN A 202 1 HET QQ4 A 203 41 HET SE9 A 204 31 HET SO4 A 205 5 HETNAM MN MANGANESE (II) ION HETNAM QQ4 HEXA VINYLPYRROLIDONE K15 HETNAM SE9 (2P)-5-HYDROXY-N-[2-(2-METHOXYPYRIDIN-4-YL)ETHYL]-6- HETNAM 2 SE9 OXO-2-[3-(TRIFLUOROMETHYL)PHENYL]-1,6- HETNAM 3 SE9 DIHYDROPYRIMIDINE-4-CARBOXAMIDE HETNAM SO4 SULFATE ION HETSYN QQ4 1,1',1'',1''',1'''',1'''''-[(3R,5R,7R,9S,11R)-DODECANE- HETSYN 2 QQ4 1,3,5,7,9,11-HEXAYL]HEXA(PYRROLIDIN-2-ONE) FORMUL 2 MN 2(MN 2+) FORMUL 4 QQ4 C36 H56 N6 O6 FORMUL 5 SE9 C20 H17 F3 N4 O4 FORMUL 6 SO4 O4 S 2- FORMUL 7 HOH *25(H2 O) HELIX 1 AA1 SER A -1 PHE A 9 1 11 HELIX 2 AA2 ASN A 10 TYR A 24 1 15 HELIX 3 AA3 GLU A 31 ASP A 50 1 20 HELIX 4 AA4 ASP A 83 GLY A 99 1 17 HELIX 5 AA5 GLU A 126 LYS A 137 1 12 HELIX 6 AA6 LYS A 158 ASP A 160 5 3 HELIX 7 AA7 ASP A 164 ARG A 185 1 22 HELIX 8 AA8 LEU A 187 GLN A 193 1 7 SHEET 1 AA1 5 PHE A 76 ILE A 78 0 SHEET 2 AA1 5 LEU A 109 ASP A 111 -1 O TYR A 110 N GLU A 77 SHEET 3 AA1 5 ARG A 116 THR A 123 -1 O ARG A 116 N ASP A 111 SHEET 4 AA1 5 HIS A 144 SER A 149 1 O PHE A 148 N GLY A 121 SHEET 5 AA1 5 GLU A 154 ALA A 156 -1 O MET A 155 N ILE A 147 LINK NE2 HIS A 41 MN MN A 201 1555 1555 2.37 LINK OE1 GLU A 80 MN MN A 202 1555 1555 2.49 LINK OD2 ASP A 108 MN MN A 201 1555 1555 2.06 LINK OD1 ASP A 108 MN MN A 202 1555 1555 2.18 LINK OE2 GLU A 119 MN MN A 201 1555 1555 2.19 LINK O ILE A 120 MN MN A 201 1555 1555 2.19 LINK MN MN A 201 O13 SE9 A 204 1555 1555 2.27 LINK MN MN A 201 O15 SE9 A 204 1555 1555 2.03 LINK MN MN A 202 O10 SE9 A 204 1555 1555 2.42 LINK MN MN A 202 O13 SE9 A 204 1555 1555 2.26 CRYST1 89.316 89.316 134.121 90.00 90.00 90.00 I 4 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011196 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011196 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007456 0.00000