HEADER VIRAL PROTEIN,HYDROLASE/INHIBITOR 01-JUL-22 8DJV TITLE THE N-TERMINAL DOMAIN OF PA ENDONUCLEASE FROM THE INFLUENZA H1N1 VIRAL TITLE 2 POLYMERASE IN COMPLEX WITH 6-BROMO-3-HYDROXY-N-METHOXY-4-OXO-1,4- TITLE 3 DIHYDROPYRIDINE-2-CARBOXAMIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: POLYMERASE ACIDIC PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PROTEIN PA-X; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS; SOURCE 3 ORGANISM_TAXID: 641501; SOURCE 4 STRAIN: A/CALIFORNIA/04/2009(H1N1); SOURCE 5 GENE: PA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693 KEYWDS DRUG DISCOVERY, METAL-BINDING PHARMACOPHORE, ISOSTERES, INFLUENZA KEYWDS 2 ENDONUCLEASE, VIRAL PROTEIN-INHIBITOR COMPLEX, ANTIVIRAL PROTEIN, KEYWDS 3 VIRAL PROTEIN, HYDROLASE-INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.J.KOHLBRAND,R.W.STOKES,J.KARGES,H.SEO,B.SANKARAN,S.M.COHEN REVDAT 3 25-OCT-23 8DJV 1 REMARK REVDAT 2 01-FEB-23 8DJV 1 JRNL REVDAT 1 21-DEC-22 8DJV 0 JRNL AUTH R.W.STOKES,A.J.KOHLBRAND,H.SEO,B.SANKARAN,J.KARGES,S.M.COHEN JRNL TITL CARBOXYLIC ACID ISOSTERE DERIVATIVES OF HYDROXYPYRIDINONES JRNL TITL 2 AS CORE SCAFFOLDS FOR INFLUENZA ENDONUCLEASE INHIBITORS. JRNL REF ACS MED.CHEM.LETT. V. 14 75 2023 JRNL REFN ISSN 1948-5875 JRNL PMID 36655124 JRNL DOI 10.1021/ACSMEDCHEMLETT.2C00434 REMARK 2 REMARK 2 RESOLUTION. 2.08 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.08 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.23 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 22176 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.265 REMARK 3 R VALUE (WORKING SET) : 0.263 REMARK 3 FREE R VALUE : 0.291 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.020 REMARK 3 FREE R VALUE TEST SET COUNT : 2222 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.2300 - 5.2400 1.00 1272 138 0.2113 0.2271 REMARK 3 2 5.2300 - 4.1600 1.00 1266 131 0.1950 0.2182 REMARK 3 3 4.1600 - 3.6300 1.00 1268 139 0.2038 0.2341 REMARK 3 4 3.6300 - 3.3000 1.00 1261 142 0.2507 0.2798 REMARK 3 5 3.3000 - 3.0700 1.00 1256 137 0.2942 0.3215 REMARK 3 6 3.0700 - 2.8800 1.00 1258 137 0.3035 0.3264 REMARK 3 7 2.8800 - 2.7400 1.00 1262 145 0.3301 0.3589 REMARK 3 8 2.7400 - 2.6200 1.00 1249 140 0.3300 0.3879 REMARK 3 9 2.6200 - 2.5200 1.00 1264 145 0.3611 0.3645 REMARK 3 10 2.5200 - 2.4300 1.00 1256 141 0.3315 0.3928 REMARK 3 11 2.4300 - 2.3600 1.00 1256 140 0.3615 0.4077 REMARK 3 12 2.3600 - 2.2900 1.00 1265 147 0.3420 0.3848 REMARK 3 13 2.2900 - 2.2300 1.00 1264 142 0.3230 0.3658 REMARK 3 14 2.2300 - 2.1700 1.00 1243 138 0.3404 0.3430 REMARK 3 15 2.1700 - 2.1300 1.00 1258 143 0.3540 0.3538 REMARK 3 16 2.1300 - 2.0800 0.84 1056 117 0.3495 0.3978 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.364 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 33.897 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 37.58 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 48.51 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 1528 REMARK 3 ANGLE : 1.208 2051 REMARK 3 CHIRALITY : 0.063 217 REMARK 3 PLANARITY : 0.010 262 REMARK 3 DIHEDRAL : 19.471 577 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -1 THROUGH 31 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.5116 7.0933 -20.4140 REMARK 3 T TENSOR REMARK 3 T11: 0.5061 T22: 0.5643 REMARK 3 T33: 0.5062 T12: 0.1677 REMARK 3 T13: 0.0750 T23: -0.1596 REMARK 3 L TENSOR REMARK 3 L11: 1.4876 L22: 3.0617 REMARK 3 L33: 5.7187 L12: 1.9918 REMARK 3 L13: 0.7225 L23: -0.4981 REMARK 3 S TENSOR REMARK 3 S11: -0.0845 S12: 0.1243 S13: -0.1031 REMARK 3 S21: -0.0982 S22: -0.1038 S23: 0.2637 REMARK 3 S31: 0.1996 S32: 0.0134 S33: 0.1640 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 32 THROUGH 126 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.8440 12.3551 -8.3713 REMARK 3 T TENSOR REMARK 3 T11: 0.3042 T22: 0.4811 REMARK 3 T33: 0.4252 T12: 0.0559 REMARK 3 T13: 0.1055 T23: -0.0831 REMARK 3 L TENSOR REMARK 3 L11: 4.7827 L22: 1.5165 REMARK 3 L33: 2.2618 L12: -0.0416 REMARK 3 L13: -0.5946 L23: 0.6592 REMARK 3 S TENSOR REMARK 3 S11: 0.0841 S12: -0.4392 S13: -0.3579 REMARK 3 S21: 0.0943 S22: -0.3338 S23: 0.5278 REMARK 3 S31: 0.0990 S32: -0.5075 S33: 0.2272 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 127 THROUGH 198 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.1477 19.2622 -5.6414 REMARK 3 T TENSOR REMARK 3 T11: 0.2238 T22: 0.3712 REMARK 3 T33: 0.3499 T12: 0.0449 REMARK 3 T13: 0.0612 T23: -0.0323 REMARK 3 L TENSOR REMARK 3 L11: 3.3845 L22: 3.3567 REMARK 3 L33: 3.5331 L12: -0.1919 REMARK 3 L13: 0.5050 L23: -0.1273 REMARK 3 S TENSOR REMARK 3 S11: 0.1660 S12: -0.2357 S13: 0.4048 REMARK 3 S21: 0.0323 S22: -0.2109 S23: 0.1796 REMARK 3 S31: -0.1959 S32: -0.1310 S33: 0.0420 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8DJV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-AUG-22. REMARK 100 THE DEPOSITION ID IS D_1000266813. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-AUG-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : BRUKER AXS MICROSTAR REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : APEX II CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : APEX 2 REMARK 200 DATA SCALING SOFTWARE : APEX 2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22176 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.080 REMARK 200 RESOLUTION RANGE LOW (A) : 37.240 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 17.70 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.08 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.15 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.77500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6E6V REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 32% PEG4000, 100 MM TRIS, PH 8.35, 200 REMARK 280 -220 MM SODIUM ACETATE, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 62 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+2/3 REMARK 290 6555 X-Y,X,Z+1/3 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+2/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 80.17267 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 40.08633 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 80.17267 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 40.08633 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 80.17267 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 40.08633 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 80.17267 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 40.08633 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 428 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 454 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -5 REMARK 465 GLY A -4 REMARK 465 SER A -3 REMARK 465 GLY A -2 REMARK 465 SER A 65 REMARK 465 GLY A 66 REMARK 465 ASP A 67 REMARK 465 PRO A 68 REMARK 465 ASN A 69 REMARK 465 ALA A 70 REMARK 465 LEU A 71 REMARK 465 LEU A 72 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 23 CG CD OE1 OE2 REMARK 470 HIS A 74 CG ND1 CD2 CE1 NE2 REMARK 470 GLU A 165 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 10 157.18 -49.56 REMARK 500 GLU A 23 13.35 -66.98 REMARK 500 TYR A 24 14.64 -140.44 REMARK 500 LYS A 139 28.07 48.96 REMARK 500 GLU A 141 8.48 -64.03 REMARK 500 THR A 157 129.30 -37.90 REMARK 500 THR A 162 -57.98 65.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 459 DISTANCE = 5.92 ANGSTROMS REMARK 525 HOH A 460 DISTANCE = 7.32 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 301 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 41 NE2 REMARK 620 2 ASP A 108 OD2 88.5 REMARK 620 3 GLU A 119 OE2 176.3 88.2 REMARK 620 4 ILE A 120 O 87.1 83.8 90.8 REMARK 620 5 U3U A 303 O01 86.6 100.5 95.8 172.3 REMARK 620 6 U3U A 303 O14 84.0 172.3 99.2 94.0 80.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 302 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 80 OE2 REMARK 620 2 ASP A 108 OD1 90.2 REMARK 620 3 U3U A 303 O01 100.0 83.4 REMARK 620 4 U3U A 303 O08 84.2 174.1 95.7 REMARK 620 5 HOH A 430 O 77.1 89.9 172.8 90.6 REMARK 620 N 1 2 3 4 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 8CTF RELATED DB: PDB REMARK 900 RELATED ID: 8DDB RELATED DB: PDB REMARK 900 RELATED ID: 7V04 RELATED DB: PDB REMARK 900 RELATED ID: 8DDE RELATED DB: PDB REMARK 900 RELATED ID: 8DHN RELATED DB: PDB REMARK 900 RELATED ID: 8DAL RELATED DB: PDB DBREF 8DJV A 1 198 UNP C6Y817 C6Y817_9INFA 1 198 SEQADV 8DJV MET A -5 UNP C6Y817 INITIATING METHIONINE SEQADV 8DJV GLY A -4 UNP C6Y817 EXPRESSION TAG SEQADV 8DJV SER A -3 UNP C6Y817 EXPRESSION TAG SEQADV 8DJV GLY A -2 UNP C6Y817 EXPRESSION TAG SEQADV 8DJV SER A -1 UNP C6Y817 EXPRESSION TAG SEQADV 8DJV ALA A 0 UNP C6Y817 EXPRESSION TAG SEQADV 8DJV GLY A 52 UNP C6Y817 HIS 52 CONFLICT SEQADV 8DJV A UNP C6Y817 PHE 53 DELETION SEQADV 8DJV A UNP C6Y817 ILE 54 DELETION SEQADV 8DJV A UNP C6Y817 ASP 55 DELETION SEQADV 8DJV A UNP C6Y817 GLU 56 DELETION SEQADV 8DJV A UNP C6Y817 ARG 57 DELETION SEQADV 8DJV A UNP C6Y817 GLY 58 DELETION SEQADV 8DJV A UNP C6Y817 GLU 59 DELETION SEQADV 8DJV A UNP C6Y817 SER 60 DELETION SEQADV 8DJV A UNP C6Y817 ILE 61 DELETION SEQADV 8DJV A UNP C6Y817 ILE 62 DELETION SEQADV 8DJV A UNP C6Y817 VAL 63 DELETION SEQADV 8DJV A UNP C6Y817 GLU 64 DELETION SEQRES 1 A 192 MET GLY SER GLY SER ALA MET GLU ASP PHE VAL ARG GLN SEQRES 2 A 192 CYS PHE ASN PRO MET ILE VAL GLU LEU ALA GLU LYS ALA SEQRES 3 A 192 MET LYS GLU TYR GLY GLU ASP PRO LYS ILE GLU THR ASN SEQRES 4 A 192 LYS PHE ALA ALA ILE CYS THR HIS LEU GLU VAL CYS PHE SEQRES 5 A 192 MET TYR SER ASP PHE GLY SER GLY ASP PRO ASN ALA LEU SEQRES 6 A 192 LEU LYS HIS ARG PHE GLU ILE ILE GLU GLY ARG ASP ARG SEQRES 7 A 192 ILE MET ALA TRP THR VAL VAL ASN SER ILE CYS ASN THR SEQRES 8 A 192 THR GLY VAL GLU LYS PRO LYS PHE LEU PRO ASP LEU TYR SEQRES 9 A 192 ASP TYR LYS GLU ASN ARG PHE ILE GLU ILE GLY VAL THR SEQRES 10 A 192 ARG ARG GLU VAL HIS ILE TYR TYR LEU GLU LYS ALA ASN SEQRES 11 A 192 LYS ILE LYS SER GLU LYS THR HIS ILE HIS ILE PHE SER SEQRES 12 A 192 PHE THR GLY GLU GLU MET ALA THR LYS ALA ASP TYR THR SEQRES 13 A 192 LEU ASP GLU GLU SER ARG ALA ARG ILE LYS THR ARG LEU SEQRES 14 A 192 PHE THR ILE ARG GLN GLU MET ALA SER ARG SER LEU TRP SEQRES 15 A 192 ASP SER PHE ARG GLN SER GLU ARG GLY GLU HET MN A 301 1 HET MN A 302 1 HET U3U A 303 19 HETNAM MN MANGANESE (II) ION HETNAM U3U 6-BROMO-3-HYDROXY-N-METHOXY-4-OXO-1,4-DIHYDROPYRIDINE- HETNAM 2 U3U 2-CARBOXAMIDE FORMUL 2 MN 2(MN 2+) FORMUL 4 U3U C7 H7 BR N2 O4 FORMUL 5 HOH *60(H2 O) HELIX 1 AA1 SER A -1 PHE A 9 1 11 HELIX 2 AA2 ASN A 10 GLU A 23 1 14 HELIX 3 AA3 GLU A 31 GLY A 52 1 22 HELIX 4 AA4 ASP A 83 GLY A 99 1 17 HELIX 5 AA5 GLU A 126 LYS A 139 1 14 HELIX 6 AA6 LYS A 158 ASP A 160 5 3 HELIX 7 AA7 ASP A 164 ARG A 185 1 22 HELIX 8 AA8 LEU A 187 GLN A 193 1 7 SHEET 1 AA1 5 PHE A 76 ILE A 78 0 SHEET 2 AA1 5 LEU A 109 ASP A 111 -1 O TYR A 110 N GLU A 77 SHEET 3 AA1 5 ARG A 116 THR A 123 -1 O ARG A 116 N ASP A 111 SHEET 4 AA1 5 THR A 143 SER A 149 1 O HIS A 144 N GLU A 119 SHEET 5 AA1 5 GLU A 154 ALA A 156 -1 O MET A 155 N ILE A 147 LINK NE2 HIS A 41 MN MN A 301 1555 1555 2.50 LINK OE2 GLU A 80 MN MN A 302 1555 1555 2.35 LINK OD2 ASP A 108 MN MN A 301 1555 1555 2.28 LINK OD1 ASP A 108 MN MN A 302 1555 1555 2.19 LINK OE2 GLU A 119 MN MN A 301 1555 1555 2.14 LINK O ILE A 120 MN MN A 301 1555 1555 2.19 LINK MN MN A 301 O01 U3U A 303 1555 1555 2.10 LINK MN MN A 301 O14 U3U A 303 1555 1555 2.03 LINK MN MN A 302 O01 U3U A 303 1555 1555 1.99 LINK MN MN A 302 O08 U3U A 303 1555 1555 1.84 LINK MN MN A 302 O HOH A 430 1555 1555 2.28 CRYST1 74.465 74.465 120.259 90.00 90.00 120.00 P 62 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013429 0.007753 0.000000 0.00000 SCALE2 0.000000 0.015507 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008315 0.00000