data_8DO1
#
_entry.id 8DO1
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.378
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 8DO1 pdb_00008do1 10.2210/pdb8do1/pdb
WWPDB D_1000266969 ? ?
EMDB EMD-27587 ? ?
#
_pdbx_database_related.db_name EMDB
_pdbx_database_related.details 'Cryo-EM structure of the human Sec61 complex inhibited by ipomoeassin F'
_pdbx_database_related.db_id EMD-27587
_pdbx_database_related.content_type 'associated EM volume'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.status_code_sf ?
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.entry_id 8DO1
_pdbx_database_status.recvd_initial_deposition_date 2022-07-12
_pdbx_database_status.SG_entry N
_pdbx_database_status.deposit_site RCSB
_pdbx_database_status.process_site RCSB
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.status_code_nmr_data ?
_pdbx_database_status.methods_development_category ?
_pdbx_database_status.pdb_format_compatible Y
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
_audit_author.identifier_ORCID
'Park, E.' 1 0000-0003-2994-5174
'Itskanov, S.' 2 ?
#
_citation.abstract ?
_citation.abstract_id_CAS ?
_citation.book_id_ISBN ?
_citation.book_publisher ?
_citation.book_publisher_city ?
_citation.book_title ?
_citation.coordinate_linkage ?
_citation.country US
_citation.database_id_Medline ?
_citation.details ?
_citation.id primary
_citation.journal_abbrev Nat.Chem.Biol.
_citation.journal_id_ASTM ?
_citation.journal_id_CSD ?
_citation.journal_id_ISSN 1552-4469
_citation.journal_full ?
_citation.journal_issue ?
_citation.journal_volume 19
_citation.language ?
_citation.page_first 1063
_citation.page_last 1071
_citation.title 'A common mechanism of Sec61 translocon inhibition by small molecules.'
_citation.year 2023
_citation.database_id_CSD ?
_citation.pdbx_database_id_DOI 10.1038/s41589-023-01337-y
_citation.pdbx_database_id_PubMed 37169959
_citation.pdbx_database_id_patent ?
_citation.unpublished_flag ?
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Itskanov, S.' 1 ?
primary 'Wang, L.' 2 ?
primary 'Junne, T.' 3 ?
primary 'Sherriff, R.' 4 ?
primary 'Xiao, L.' 5 ?
primary 'Blanchard, N.' 6 ?
primary 'Shi, W.Q.' 7 ?
primary 'Forsyth, C.' 8 ?
primary 'Hoepfner, D.' 9 ?
primary 'Spiess, M.' 10 ?
primary 'Park, E.' 11 ?
#
_cell.angle_alpha 90.00
_cell.angle_alpha_esd ?
_cell.angle_beta 90.00
_cell.angle_beta_esd ?
_cell.angle_gamma 90.00
_cell.angle_gamma_esd ?
_cell.entry_id 8DO1
_cell.details ?
_cell.formula_units_Z ?
_cell.length_a 1.00
_cell.length_a_esd ?
_cell.length_b 1.00
_cell.length_b_esd ?
_cell.length_c 1.00
_cell.length_c_esd ?
_cell.volume ?
_cell.volume_esd ?
_cell.Z_PDB ?
_cell.reciprocal_angle_alpha ?
_cell.reciprocal_angle_beta ?
_cell.reciprocal_angle_gamma ?
_cell.reciprocal_angle_alpha_esd ?
_cell.reciprocal_angle_beta_esd ?
_cell.reciprocal_angle_gamma_esd ?
_cell.reciprocal_length_a ?
_cell.reciprocal_length_b ?
_cell.reciprocal_length_c ?
_cell.reciprocal_length_a_esd ?
_cell.reciprocal_length_b_esd ?
_cell.reciprocal_length_c_esd ?
_cell.pdbx_unique_axis ?
_cell.pdbx_esd_method ?
#
_symmetry.entry_id 8DO1
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 1
_symmetry.space_group_name_Hall ?
_symmetry.space_group_name_H-M 'P 1'
_symmetry.pdbx_full_space_group_name_H-M ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer man 'Protein transport protein Sec61 subunit alpha isoform 1' 52202.438 1 ?
'V263L, D264E, K268R, A270T, R271K, Y272V, Y276I, N277G, T278I, L394F, E346D, Q348G, M401I, R402N, H404K, M409I, V410Y, H411R' ? ?
2 polymer man 'Protein transport protein Sec61 subunit gamma' 7752.325 1 ? ? ? ?
3 polymer man 'Protein transport protein Sec61 subunit beta' 9987.456 1 ? ? ? ?
4 non-polymer syn
;[(1~{S},3~{R},4~{S},5~{R},6~{R},8~{R},10~{S},23~{R},24~{R},25~{R},26~{R})-5-acetyloxy-6-methyl-4,26-bis(oxidanyl)-17,20-bis(oxidanylidene)-10-pentyl-24-[(~{E})-3-phenylprop-2-enoyl]oxy-2,7,9,21,27-pentaoxatricyclo[21.3.1.0^{3,8}]heptacosan-25-yl] (~{E})-2-methylbut-2-enoate
;
830.954 1 ? ? ? ?
5 water nat water 18.015 1 ? ? ? ?
#
_entity_name_com.entity_id 1
_entity_name_com.name 'Sec61 alpha-1'
#
loop_
_entity_poly.entity_id
_entity_poly.type
_entity_poly.nstd_linkage
_entity_poly.nstd_monomer
_entity_poly.pdbx_seq_one_letter_code
_entity_poly.pdbx_seq_one_letter_code_can
_entity_poly.pdbx_strand_id
_entity_poly.pdbx_target_identifier
1 'polypeptide(L)' no no
;MAIKFLEVIKPFCVILPEIQKPERKIQFKEKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWMRVILASNRGTLMELG
ISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFGMIITIGQSIVYVMTGMYGDPSEMGAGICLLITIQLFVAGL
IVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPTTVNTGRGMEFEGAIIALFHLLATRTDKVRALREAFYRQNLP
NLMNLIATIFVFAVVIYFQGFRYELPIRSTKVRGQIGIYPIKLFYTSNIPIILQSALVSNLYVISQMLSARFSGNLLVSL
LGTWSDTSSGGPARAYPVGGLCYYLSPPESFGSVLEDPVHAVVYIVFMLGSCAFFSKTWIEVSGSSPRDIAKQFKDQGMV
INGKRETSIYRELKKIIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQSEVGSMGALLF
;
;MAIKFLEVIKPFCVILPEIQKPERKIQFKEKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWMRVILASNRGTLMELG
ISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFGMIITIGQSIVYVMTGMYGDPSEMGAGICLLITIQLFVAGL
IVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPTTVNTGRGMEFEGAIIALFHLLATRTDKVRALREAFYRQNLP
NLMNLIATIFVFAVVIYFQGFRYELPIRSTKVRGQIGIYPIKLFYTSNIPIILQSALVSNLYVISQMLSARFSGNLLVSL
LGTWSDTSSGGPARAYPVGGLCYYLSPPESFGSVLEDPVHAVVYIVFMLGSCAFFSKTWIEVSGSSPRDIAKQFKDQGMV
INGKRETSIYRELKKIIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQSEVGSMGALLF
;
A ?
2 'polypeptide(L)' no no MDQVMQFVEPSRQFVKDSIRLVKRCTKPDRKEFQKIAMATAIGFAIMGFIGFFVKLIHIPINNIIVGG
MDQVMQFVEPSRQFVKDSIRLVKRCTKPDRKEFQKIAMATAIGFAIMGFIGFFVKLIHIPINNIIVGG B ?
3 'polypeptide(L)' no no
;MPGPTPSGTNVGSSGRSPSKAVAARAAGSTVRQRKNASCGTRSAGRTTSAGTGGMWRFYTEDSPGLKVGPVPVLVMSLLF
IASVFMLHIWGKYTRS
;
;MPGPTPSGTNVGSSGRSPSKAVAARAAGSTVRQRKNASCGTRSAGRTTSAGTGGMWRFYTEDSPGLKVGPVPVLVMSLLF
IASVFMLHIWGKYTRS
;
C ?
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 MET n
1 2 ALA n
1 3 ILE n
1 4 LYS n
1 5 PHE n
1 6 LEU n
1 7 GLU n
1 8 VAL n
1 9 ILE n
1 10 LYS n
1 11 PRO n
1 12 PHE n
1 13 CYS n
1 14 VAL n
1 15 ILE n
1 16 LEU n
1 17 PRO n
1 18 GLU n
1 19 ILE n
1 20 GLN n
1 21 LYS n
1 22 PRO n
1 23 GLU n
1 24 ARG n
1 25 LYS n
1 26 ILE n
1 27 GLN n
1 28 PHE n
1 29 LYS n
1 30 GLU n
1 31 LYS n
1 32 VAL n
1 33 LEU n
1 34 TRP n
1 35 THR n
1 36 ALA n
1 37 ILE n
1 38 THR n
1 39 LEU n
1 40 PHE n
1 41 ILE n
1 42 PHE n
1 43 LEU n
1 44 VAL n
1 45 CYS n
1 46 CYS n
1 47 GLN n
1 48 ILE n
1 49 PRO n
1 50 LEU n
1 51 PHE n
1 52 GLY n
1 53 ILE n
1 54 MET n
1 55 SER n
1 56 SER n
1 57 ASP n
1 58 SER n
1 59 ALA n
1 60 ASP n
1 61 PRO n
1 62 PHE n
1 63 TYR n
1 64 TRP n
1 65 MET n
1 66 ARG n
1 67 VAL n
1 68 ILE n
1 69 LEU n
1 70 ALA n
1 71 SER n
1 72 ASN n
1 73 ARG n
1 74 GLY n
1 75 THR n
1 76 LEU n
1 77 MET n
1 78 GLU n
1 79 LEU n
1 80 GLY n
1 81 ILE n
1 82 SER n
1 83 PRO n
1 84 ILE n
1 85 VAL n
1 86 THR n
1 87 SER n
1 88 GLY n
1 89 LEU n
1 90 ILE n
1 91 MET n
1 92 GLN n
1 93 LEU n
1 94 LEU n
1 95 ALA n
1 96 GLY n
1 97 ALA n
1 98 LYS n
1 99 ILE n
1 100 ILE n
1 101 GLU n
1 102 VAL n
1 103 GLY n
1 104 ASP n
1 105 THR n
1 106 PRO n
1 107 LYS n
1 108 ASP n
1 109 ARG n
1 110 ALA n
1 111 LEU n
1 112 PHE n
1 113 ASN n
1 114 GLY n
1 115 ALA n
1 116 GLN n
1 117 LYS n
1 118 LEU n
1 119 PHE n
1 120 GLY n
1 121 MET n
1 122 ILE n
1 123 ILE n
1 124 THR n
1 125 ILE n
1 126 GLY n
1 127 GLN n
1 128 SER n
1 129 ILE n
1 130 VAL n
1 131 TYR n
1 132 VAL n
1 133 MET n
1 134 THR n
1 135 GLY n
1 136 MET n
1 137 TYR n
1 138 GLY n
1 139 ASP n
1 140 PRO n
1 141 SER n
1 142 GLU n
1 143 MET n
1 144 GLY n
1 145 ALA n
1 146 GLY n
1 147 ILE n
1 148 CYS n
1 149 LEU n
1 150 LEU n
1 151 ILE n
1 152 THR n
1 153 ILE n
1 154 GLN n
1 155 LEU n
1 156 PHE n
1 157 VAL n
1 158 ALA n
1 159 GLY n
1 160 LEU n
1 161 ILE n
1 162 VAL n
1 163 LEU n
1 164 LEU n
1 165 LEU n
1 166 ASP n
1 167 GLU n
1 168 LEU n
1 169 LEU n
1 170 GLN n
1 171 LYS n
1 172 GLY n
1 173 TYR n
1 174 GLY n
1 175 LEU n
1 176 GLY n
1 177 SER n
1 178 GLY n
1 179 ILE n
1 180 SER n
1 181 LEU n
1 182 PHE n
1 183 ILE n
1 184 ALA n
1 185 THR n
1 186 ASN n
1 187 ILE n
1 188 CYS n
1 189 GLU n
1 190 THR n
1 191 ILE n
1 192 VAL n
1 193 TRP n
1 194 LYS n
1 195 ALA n
1 196 PHE n
1 197 SER n
1 198 PRO n
1 199 THR n
1 200 THR n
1 201 VAL n
1 202 ASN n
1 203 THR n
1 204 GLY n
1 205 ARG n
1 206 GLY n
1 207 MET n
1 208 GLU n
1 209 PHE n
1 210 GLU n
1 211 GLY n
1 212 ALA n
1 213 ILE n
1 214 ILE n
1 215 ALA n
1 216 LEU n
1 217 PHE n
1 218 HIS n
1 219 LEU n
1 220 LEU n
1 221 ALA n
1 222 THR n
1 223 ARG n
1 224 THR n
1 225 ASP n
1 226 LYS n
1 227 VAL n
1 228 ARG n
1 229 ALA n
1 230 LEU n
1 231 ARG n
1 232 GLU n
1 233 ALA n
1 234 PHE n
1 235 TYR n
1 236 ARG n
1 237 GLN n
1 238 ASN n
1 239 LEU n
1 240 PRO n
1 241 ASN n
1 242 LEU n
1 243 MET n
1 244 ASN n
1 245 LEU n
1 246 ILE n
1 247 ALA n
1 248 THR n
1 249 ILE n
1 250 PHE n
1 251 VAL n
1 252 PHE n
1 253 ALA n
1 254 VAL n
1 255 VAL n
1 256 ILE n
1 257 TYR n
1 258 PHE n
1 259 GLN n
1 260 GLY n
1 261 PHE n
1 262 ARG n
1 263 TYR n
1 264 GLU n
1 265 LEU n
1 266 PRO n
1 267 ILE n
1 268 ARG n
1 269 SER n
1 270 THR n
1 271 LYS n
1 272 VAL n
1 273 ARG n
1 274 GLY n
1 275 GLN n
1 276 ILE n
1 277 GLY n
1 278 ILE n
1 279 TYR n
1 280 PRO n
1 281 ILE n
1 282 LYS n
1 283 LEU n
1 284 PHE n
1 285 TYR n
1 286 THR n
1 287 SER n
1 288 ASN n
1 289 ILE n
1 290 PRO n
1 291 ILE n
1 292 ILE n
1 293 LEU n
1 294 GLN n
1 295 SER n
1 296 ALA n
1 297 LEU n
1 298 VAL n
1 299 SER n
1 300 ASN n
1 301 LEU n
1 302 TYR n
1 303 VAL n
1 304 ILE n
1 305 SER n
1 306 GLN n
1 307 MET n
1 308 LEU n
1 309 SER n
1 310 ALA n
1 311 ARG n
1 312 PHE n
1 313 SER n
1 314 GLY n
1 315 ASN n
1 316 LEU n
1 317 LEU n
1 318 VAL n
1 319 SER n
1 320 LEU n
1 321 LEU n
1 322 GLY n
1 323 THR n
1 324 TRP n
1 325 SER n
1 326 ASP n
1 327 THR n
1 328 SER n
1 329 SER n
1 330 GLY n
1 331 GLY n
1 332 PRO n
1 333 ALA n
1 334 ARG n
1 335 ALA n
1 336 TYR n
1 337 PRO n
1 338 VAL n
1 339 GLY n
1 340 GLY n
1 341 LEU n
1 342 CYS n
1 343 TYR n
1 344 TYR n
1 345 LEU n
1 346 SER n
1 347 PRO n
1 348 PRO n
1 349 GLU n
1 350 SER n
1 351 PHE n
1 352 GLY n
1 353 SER n
1 354 VAL n
1 355 LEU n
1 356 GLU n
1 357 ASP n
1 358 PRO n
1 359 VAL n
1 360 HIS n
1 361 ALA n
1 362 VAL n
1 363 VAL n
1 364 TYR n
1 365 ILE n
1 366 VAL n
1 367 PHE n
1 368 MET n
1 369 LEU n
1 370 GLY n
1 371 SER n
1 372 CYS n
1 373 ALA n
1 374 PHE n
1 375 PHE n
1 376 SER n
1 377 LYS n
1 378 THR n
1 379 TRP n
1 380 ILE n
1 381 GLU n
1 382 VAL n
1 383 SER n
1 384 GLY n
1 385 SER n
1 386 SER n
1 387 PRO n
1 388 ARG n
1 389 ASP n
1 390 ILE n
1 391 ALA n
1 392 LYS n
1 393 GLN n
1 394 PHE n
1 395 LYS n
1 396 ASP n
1 397 GLN n
1 398 GLY n
1 399 MET n
1 400 VAL n
1 401 ILE n
1 402 ASN n
1 403 GLY n
1 404 LYS n
1 405 ARG n
1 406 GLU n
1 407 THR n
1 408 SER n
1 409 ILE n
1 410 TYR n
1 411 ARG n
1 412 GLU n
1 413 LEU n
1 414 LYS n
1 415 LYS n
1 416 ILE n
1 417 ILE n
1 418 PRO n
1 419 THR n
1 420 ALA n
1 421 ALA n
1 422 ALA n
1 423 PHE n
1 424 GLY n
1 425 GLY n
1 426 LEU n
1 427 CYS n
1 428 ILE n
1 429 GLY n
1 430 ALA n
1 431 LEU n
1 432 SER n
1 433 VAL n
1 434 LEU n
1 435 ALA n
1 436 ASP n
1 437 PHE n
1 438 LEU n
1 439 GLY n
1 440 ALA n
1 441 ILE n
1 442 GLY n
1 443 SER n
1 444 GLY n
1 445 THR n
1 446 GLY n
1 447 ILE n
1 448 LEU n
1 449 LEU n
1 450 ALA n
1 451 VAL n
1 452 THR n
1 453 ILE n
1 454 ILE n
1 455 TYR n
1 456 GLN n
1 457 TYR n
1 458 PHE n
1 459 GLU n
1 460 ILE n
1 461 PHE n
1 462 VAL n
1 463 LYS n
1 464 GLU n
1 465 GLN n
1 466 SER n
1 467 GLU n
1 468 VAL n
1 469 GLY n
1 470 SER n
1 471 MET n
1 472 GLY n
1 473 ALA n
1 474 LEU n
1 475 LEU n
1 476 PHE n
2 1 MET n
2 2 ASP n
2 3 GLN n
2 4 VAL n
2 5 MET n
2 6 GLN n
2 7 PHE n
2 8 VAL n
2 9 GLU n
2 10 PRO n
2 11 SER n
2 12 ARG n
2 13 GLN n
2 14 PHE n
2 15 VAL n
2 16 LYS n
2 17 ASP n
2 18 SER n
2 19 ILE n
2 20 ARG n
2 21 LEU n
2 22 VAL n
2 23 LYS n
2 24 ARG n
2 25 CYS n
2 26 THR n
2 27 LYS n
2 28 PRO n
2 29 ASP n
2 30 ARG n
2 31 LYS n
2 32 GLU n
2 33 PHE n
2 34 GLN n
2 35 LYS n
2 36 ILE n
2 37 ALA n
2 38 MET n
2 39 ALA n
2 40 THR n
2 41 ALA n
2 42 ILE n
2 43 GLY n
2 44 PHE n
2 45 ALA n
2 46 ILE n
2 47 MET n
2 48 GLY n
2 49 PHE n
2 50 ILE n
2 51 GLY n
2 52 PHE n
2 53 PHE n
2 54 VAL n
2 55 LYS n
2 56 LEU n
2 57 ILE n
2 58 HIS n
2 59 ILE n
2 60 PRO n
2 61 ILE n
2 62 ASN n
2 63 ASN n
2 64 ILE n
2 65 ILE n
2 66 VAL n
2 67 GLY n
2 68 GLY n
3 1 MET n
3 2 PRO n
3 3 GLY n
3 4 PRO n
3 5 THR n
3 6 PRO n
3 7 SER n
3 8 GLY n
3 9 THR n
3 10 ASN n
3 11 VAL n
3 12 GLY n
3 13 SER n
3 14 SER n
3 15 GLY n
3 16 ARG n
3 17 SER n
3 18 PRO n
3 19 SER n
3 20 LYS n
3 21 ALA n
3 22 VAL n
3 23 ALA n
3 24 ALA n
3 25 ARG n
3 26 ALA n
3 27 ALA n
3 28 GLY n
3 29 SER n
3 30 THR n
3 31 VAL n
3 32 ARG n
3 33 GLN n
3 34 ARG n
3 35 LYS n
3 36 ASN n
3 37 ALA n
3 38 SER n
3 39 CYS n
3 40 GLY n
3 41 THR n
3 42 ARG n
3 43 SER n
3 44 ALA n
3 45 GLY n
3 46 ARG n
3 47 THR n
3 48 THR n
3 49 SER n
3 50 ALA n
3 51 GLY n
3 52 THR n
3 53 GLY n
3 54 GLY n
3 55 MET n
3 56 TRP n
3 57 ARG n
3 58 PHE n
3 59 TYR n
3 60 THR n
3 61 GLU n
3 62 ASP n
3 63 SER n
3 64 PRO n
3 65 GLY n
3 66 LEU n
3 67 LYS n
3 68 VAL n
3 69 GLY n
3 70 PRO n
3 71 VAL n
3 72 PRO n
3 73 VAL n
3 74 LEU n
3 75 VAL n
3 76 MET n
3 77 SER n
3 78 LEU n
3 79 LEU n
3 80 PHE n
3 81 ILE n
3 82 ALA n
3 83 SER n
3 84 VAL n
3 85 PHE n
3 86 MET n
3 87 LEU n
3 88 HIS n
3 89 ILE n
3 90 TRP n
3 91 GLY n
3 92 LYS n
3 93 TYR n
3 94 THR n
3 95 ARG n
3 96 SER n
#
loop_
_entity_src_gen.entity_id
_entity_src_gen.pdbx_src_id
_entity_src_gen.pdbx_alt_source_flag
_entity_src_gen.pdbx_seq_type
_entity_src_gen.pdbx_beg_seq_num
_entity_src_gen.pdbx_end_seq_num
_entity_src_gen.gene_src_common_name
_entity_src_gen.gene_src_genus
_entity_src_gen.pdbx_gene_src_gene
_entity_src_gen.gene_src_species
_entity_src_gen.gene_src_strain
_entity_src_gen.gene_src_tissue
_entity_src_gen.gene_src_tissue_fraction
_entity_src_gen.gene_src_details
_entity_src_gen.pdbx_gene_src_fragment
_entity_src_gen.pdbx_gene_src_scientific_name
_entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id
_entity_src_gen.pdbx_gene_src_variant
_entity_src_gen.pdbx_gene_src_cell_line
_entity_src_gen.pdbx_gene_src_atcc
_entity_src_gen.pdbx_gene_src_organ
_entity_src_gen.pdbx_gene_src_organelle
_entity_src_gen.pdbx_gene_src_cell
_entity_src_gen.pdbx_gene_src_cellular_location
_entity_src_gen.host_org_common_name
_entity_src_gen.pdbx_host_org_scientific_name
_entity_src_gen.pdbx_host_org_ncbi_taxonomy_id
_entity_src_gen.host_org_genus
_entity_src_gen.pdbx_host_org_gene
_entity_src_gen.pdbx_host_org_organ
_entity_src_gen.host_org_species
_entity_src_gen.pdbx_host_org_tissue
_entity_src_gen.pdbx_host_org_tissue_fraction
_entity_src_gen.pdbx_host_org_strain
_entity_src_gen.pdbx_host_org_variant
_entity_src_gen.pdbx_host_org_cell_line
_entity_src_gen.pdbx_host_org_atcc
_entity_src_gen.pdbx_host_org_culture_collection
_entity_src_gen.pdbx_host_org_cell
_entity_src_gen.pdbx_host_org_organelle
_entity_src_gen.pdbx_host_org_cellular_location
_entity_src_gen.pdbx_host_org_vector_type
_entity_src_gen.pdbx_host_org_vector
_entity_src_gen.host_org_details
_entity_src_gen.expression_system_id
_entity_src_gen.plasmid_name
_entity_src_gen.plasmid_details
_entity_src_gen.pdbx_description
1 1 sample 'Biological sequence' 1 476 human ? 'SEC61A1, SEC61A' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? 'fall armyworm'
'Spodoptera frugiperda' 7108 ? ? ? ? ? ? ? ? Sf9 ? ? ? ? ? Baculovirus ? ? ? pFastBac ? ?
2 1 sample 'Biological sequence' 1 68 human ? SEC61G ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? 'fall armyworm'
'Spodoptera frugiperda' 7108 ? ? ? ? ? ? ? ? Sf9 ? ? ? ? ? Baculovirus ? ? ? pFastBac ? ?
3 1 sample 'Biological sequence' 1 96 human ? SEC61B ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? 'fall armyworm'
'Spodoptera frugiperda' 7108 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ?
#
loop_
_struct_ref.id
_struct_ref.db_name
_struct_ref.db_code
_struct_ref.pdbx_db_accession
_struct_ref.pdbx_db_isoform
_struct_ref.entity_id
_struct_ref.pdbx_seq_one_letter_code
_struct_ref.pdbx_align_begin
1 UNP S61A1_HUMAN P61619 ? 1
;MAIKFLEVIKPFCVILPEIQKPERKIQFKEKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWMRVILASNRGTLMELG
ISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFGMIITIGQSIVYVMTGMYGDPSEMGAGICLLITIQLFVAGL
IVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPTTVNTGRGMEFEGAIIALFHLLATRTDKVRALREAFYRQNLP
NLMNLIATIFVFAVVIYFQGFRVDLPIKSARYRGQYNTYPIKLFYTSNIPIILQSALVSNLYVISQMLSARFSGNLLVSL
LGTWSDTSSGGPARAYPVGGLCYYLSPPESFGSVLEDPVHAVVYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMV
MRGHRETSMVHELNRYIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQSEVGSMGALLF
;
1
2 UNP SC61G_HUMAN P60059 ? 2 MDQVMQFVEPSRQFVKDSIRLVKRCTKPDRKEFQKIAMATAIGFAIMGFIGFFVKLIHIPINNIIVGG 1
3 UNP SC61B_HUMAN P60468 ? 3
;MPGPTPSGTNVGSSGRSPSKAVAARAAGSTVRQRKNASCGTRSAGRTTSAGTGGMWRFYTEDSPGLKVGPVPVLVMSLLF
IASVFMLHIWGKYTRS
;
1
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.pdbx_PDB_id_code
_struct_ref_seq.pdbx_strand_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.pdbx_seq_align_beg_ins_code
_struct_ref_seq.seq_align_end
_struct_ref_seq.pdbx_seq_align_end_ins_code
_struct_ref_seq.pdbx_db_accession
_struct_ref_seq.db_align_beg
_struct_ref_seq.pdbx_db_align_beg_ins_code
_struct_ref_seq.db_align_end
_struct_ref_seq.pdbx_db_align_end_ins_code
_struct_ref_seq.pdbx_auth_seq_align_beg
_struct_ref_seq.pdbx_auth_seq_align_end
1 1 8DO1 A 1 ? 476 ? P61619 1 ? 476 ? 1 476
2 2 8DO1 B 1 ? 68 ? P60059 1 ? 68 ? 1 68
3 3 8DO1 C 1 ? 96 ? P60468 1 ? 96 ? 1 96
#
loop_
_struct_ref_seq_dif.align_id
_struct_ref_seq_dif.pdbx_pdb_id_code
_struct_ref_seq_dif.mon_id
_struct_ref_seq_dif.pdbx_pdb_strand_id
_struct_ref_seq_dif.seq_num
_struct_ref_seq_dif.pdbx_pdb_ins_code
_struct_ref_seq_dif.pdbx_seq_db_name
_struct_ref_seq_dif.pdbx_seq_db_accession_code
_struct_ref_seq_dif.db_mon_id
_struct_ref_seq_dif.pdbx_seq_db_seq_num
_struct_ref_seq_dif.details
_struct_ref_seq_dif.pdbx_auth_seq_num
_struct_ref_seq_dif.pdbx_ordinal
1 8DO1 TYR A 263 ? UNP P61619 VAL 263 conflict 263 1
1 8DO1 GLU A 264 ? UNP P61619 ASP 264 'engineered mutation' 264 2
1 8DO1 ARG A 268 ? UNP P61619 LYS 268 'engineered mutation' 268 3
1 8DO1 THR A 270 ? UNP P61619 ALA 270 'engineered mutation' 270 4
1 8DO1 LYS A 271 ? UNP P61619 ARG 271 'engineered mutation' 271 5
1 8DO1 VAL A 272 ? UNP P61619 TYR 272 'engineered mutation' 272 6
1 8DO1 ILE A 276 ? UNP P61619 TYR 276 'engineered mutation' 276 7
1 8DO1 GLY A 277 ? UNP P61619 ASN 277 'engineered mutation' 277 8
1 8DO1 ILE A 278 ? UNP P61619 THR 278 'engineered mutation' 278 9
1 8DO1 PRO A 387 ? UNP P61619 ALA 387 conflict 387 10
1 8DO1 ARG A 388 ? UNP P61619 LYS 388 conflict 388 11
1 8DO1 ILE A 390 ? UNP P61619 VAL 390 conflict 390 12
1 8DO1 PHE A 394 ? UNP P61619 LEU 394 'engineered mutation' 394 13
1 8DO1 ASP A 396 ? UNP P61619 GLU 396 conflict 396 14
1 8DO1 GLY A 398 ? UNP P61619 GLN 398 conflict 398 15
1 8DO1 ILE A 401 ? UNP P61619 MET 401 'engineered mutation' 401 16
1 8DO1 ASN A 402 ? UNP P61619 ARG 402 'engineered mutation' 402 17
1 8DO1 LYS A 404 ? UNP P61619 HIS 404 'engineered mutation' 404 18
1 8DO1 ILE A 409 ? UNP P61619 MET 409 'engineered mutation' 409 19
1 8DO1 TYR A 410 ? UNP P61619 VAL 410 'engineered mutation' 410 20
1 8DO1 ARG A 411 ? UNP P61619 HIS 411 'engineered mutation' 411 21
1 8DO1 LYS A 414 ? UNP P61619 ASN 414 conflict 414 22
1 8DO1 LYS A 415 ? UNP P61619 ARG 415 conflict 415 23
1 8DO1 ILE A 416 ? UNP P61619 TYR 416 conflict 416 24
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093
ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209
ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118
ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103
CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158
GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144
GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129
GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067
HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162
HOH non-polymer . WATER ? 'H2 O' 18.015
ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173
LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173
LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195
MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211
PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189
PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130
SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093
SXF non-polymer .
;[(1~{S},3~{R},4~{S},5~{R},6~{R},8~{R},10~{S},23~{R},24~{R},25~{R},26~{R})-5-acetyloxy-6-methyl-4,26-bis(oxidanyl)-17,20-bis(oxidanylidene)-10-pentyl-24-[(~{E})-3-phenylprop-2-enoyl]oxy-2,7,9,21,27-pentaoxatricyclo[21.3.1.0^{3,8}]heptacosan-25-yl] (~{E})-2-methylbut-2-enoate
;
'Ipomoeassin F' 'C44 H62 O15' 830.954
THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119
TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225
TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189
VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146
#
_exptl.absorpt_coefficient_mu ?
_exptl.absorpt_correction_T_max ?
_exptl.absorpt_correction_T_min ?
_exptl.absorpt_correction_type ?
_exptl.absorpt_process_details ?
_exptl.entry_id 8DO1
_exptl.crystals_number ?
_exptl.details ?
_exptl.method 'ELECTRON MICROSCOPY'
_exptl.method_details ?
#
_refine.aniso_B[1][1] ?
_refine.aniso_B[1][2] ?
_refine.aniso_B[1][3] ?
_refine.aniso_B[2][2] ?
_refine.aniso_B[2][3] ?
_refine.aniso_B[3][3] ?
_refine.B_iso_max ?
_refine.B_iso_mean 65.33
_refine.B_iso_min ?
_refine.correlation_coeff_Fo_to_Fc ?
_refine.correlation_coeff_Fo_to_Fc_free ?
_refine.details ?
_refine.diff_density_max ?
_refine.diff_density_max_esd ?
_refine.diff_density_min ?
_refine.diff_density_min_esd ?
_refine.diff_density_rms ?
_refine.diff_density_rms_esd ?
_refine.entry_id 8DO1
_refine.pdbx_refine_id 'ELECTRON MICROSCOPY'
_refine.ls_abs_structure_details ?
_refine.ls_abs_structure_Flack ?
_refine.ls_abs_structure_Flack_esd ?
_refine.ls_abs_structure_Rogers ?
_refine.ls_abs_structure_Rogers_esd ?
_refine.ls_d_res_high .
_refine.ls_d_res_low ?
_refine.ls_extinction_coef ?
_refine.ls_extinction_coef_esd ?
_refine.ls_extinction_expression ?
_refine.ls_extinction_method ?
_refine.ls_goodness_of_fit_all ?
_refine.ls_goodness_of_fit_all_esd ?
_refine.ls_goodness_of_fit_obs ?
_refine.ls_goodness_of_fit_obs_esd ?
_refine.ls_hydrogen_treatment ?
_refine.ls_matrix_type ?
_refine.ls_number_constraints ?
_refine.ls_number_parameters ?
_refine.ls_number_reflns_all ?
_refine.ls_number_reflns_obs ?
_refine.ls_number_reflns_R_free ?
_refine.ls_number_reflns_R_work ?
_refine.ls_number_restraints ?
_refine.ls_percent_reflns_obs ?
_refine.ls_percent_reflns_R_free ?
_refine.ls_R_factor_all ?
_refine.ls_R_factor_obs ?
_refine.ls_R_factor_R_free ?
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_R_factor_R_work ?
_refine.ls_R_Fsqd_factor_obs ?
_refine.ls_R_I_factor_obs ?
_refine.ls_redundancy_reflns_all ?
_refine.ls_redundancy_reflns_obs ?
_refine.ls_restrained_S_all ?
_refine.ls_restrained_S_obs ?
_refine.ls_shift_over_esd_max ?
_refine.ls_shift_over_esd_mean ?
_refine.ls_structure_factor_coef ?
_refine.ls_weighting_details ?
_refine.ls_weighting_scheme ?
_refine.ls_wR_factor_all ?
_refine.ls_wR_factor_obs ?
_refine.ls_wR_factor_R_free ?
_refine.ls_wR_factor_R_work ?
_refine.occupancy_max ?
_refine.occupancy_min ?
_refine.solvent_model_details ?
_refine.solvent_model_param_bsol ?
_refine.solvent_model_param_ksol ?
_refine.pdbx_R_complete ?
_refine.ls_R_factor_gt ?
_refine.ls_goodness_of_fit_gt ?
_refine.ls_goodness_of_fit_ref ?
_refine.ls_shift_over_su_max ?
_refine.ls_shift_over_su_max_lt ?
_refine.ls_shift_over_su_mean ?
_refine.ls_shift_over_su_mean_lt ?
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F ?
_refine.pdbx_ls_sigma_Fsqd ?
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_ls_cross_valid_method NONE
_refine.pdbx_method_to_determine_struct ?
_refine.pdbx_starting_model ?
_refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2'
_refine.pdbx_R_Free_selection_details ?
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_overall_ESU_R ?
_refine.pdbx_overall_ESU_R_Free ?
_refine.pdbx_solvent_vdw_probe_radii ?
_refine.pdbx_solvent_ion_probe_radii ?
_refine.pdbx_solvent_shrinkage_radii ?
_refine.pdbx_real_space_R ?
_refine.pdbx_density_correlation ?
_refine.pdbx_pd_number_of_powder_patterns ?
_refine.pdbx_pd_number_of_points ?
_refine.pdbx_pd_meas_number_of_points ?
_refine.pdbx_pd_proc_ls_prof_R_factor ?
_refine.pdbx_pd_proc_ls_prof_wR_factor ?
_refine.pdbx_pd_Marquardt_correlation_coeff ?
_refine.pdbx_pd_Fsqrd_R_factor ?
_refine.pdbx_pd_ls_matrix_band_width ?
_refine.pdbx_overall_phase_error ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_diffrn_id ?
_refine.overall_SU_B ?
_refine.overall_SU_ML ?
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.overall_SU_R_free ?
_refine.overall_FOM_free_R_set ?
_refine.overall_FOM_work_R_set ?
_refine.pdbx_average_fsc_overall ?
_refine.pdbx_average_fsc_work ?
_refine.pdbx_average_fsc_free ?
#
loop_
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.criterion
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.number
_refine_ls_restr.rejects
_refine_ls_restr.type
_refine_ls_restr.weight
_refine_ls_restr.pdbx_restraint_function
'ELECTRON MICROSCOPY' ? 0.0026 ? 4433 ? f_bond_d ? ?
'ELECTRON MICROSCOPY' ? 0.5604 ? 6001 ? f_angle_d ? ?
'ELECTRON MICROSCOPY' ? 0.0388 ? 710 ? f_chiral_restr ? ?
'ELECTRON MICROSCOPY' ? 0.0040 ? 734 ? f_plane_restr ? ?
'ELECTRON MICROSCOPY' ? 14.0251 ? 1600 ? f_dihedral_angle_d ? ?
#
_struct.entry_id 8DO1
_struct.title 'Cryo-EM structure of the human Sec61 complex inhibited by ipomoeassin F'
_struct.pdbx_model_details ?
_struct.pdbx_formula_weight ?
_struct.pdbx_formula_weight_method ?
_struct.pdbx_model_type_details ?
_struct.pdbx_CASP_flag N
#
_struct_keywords.entry_id 8DO1
_struct_keywords.text
'translocon, inhibitor, protein translocation, PROTEIN TRANSPORT, PROTEIN TRANSPORT-INHIBITOR complex'
_struct_keywords.pdbx_keywords 'PROTEIN TRANSPORT/INHIBITOR'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
C N N 3 ?
D N N 4 ?
E N N 5 ?
#
loop_
_struct_conf.conf_type_id
_struct_conf.id
_struct_conf.pdbx_PDB_helix_id
_struct_conf.beg_label_comp_id
_struct_conf.beg_label_asym_id
_struct_conf.beg_label_seq_id
_struct_conf.pdbx_beg_PDB_ins_code
_struct_conf.end_label_comp_id
_struct_conf.end_label_asym_id
_struct_conf.end_label_seq_id
_struct_conf.pdbx_end_PDB_ins_code
_struct_conf.beg_auth_comp_id
_struct_conf.beg_auth_asym_id
_struct_conf.beg_auth_seq_id
_struct_conf.end_auth_comp_id
_struct_conf.end_auth_asym_id
_struct_conf.end_auth_seq_id
_struct_conf.pdbx_PDB_helix_class
_struct_conf.details
_struct_conf.pdbx_PDB_helix_length
HELX_P HELX_P1 AA1 LYS A 4 ? VAL A 14 ? LYS A 4 VAL A 14 1 ? 11
HELX_P HELX_P2 AA2 GLN A 27 ? CYS A 46 ? GLN A 27 CYS A 46 1 ? 20
HELX_P HELX_P3 AA3 ILE A 81 ? ALA A 97 ? ILE A 81 ALA A 97 1 ? 17
HELX_P HELX_P4 AA4 THR A 105 ? THR A 134 ? THR A 105 THR A 134 1 ? 30
HELX_P HELX_P5 AA5 ASP A 139 ? GLY A 144 ? ASP A 139 GLY A 144 1 ? 6
HELX_P HELX_P6 AA6 GLY A 144 ? GLY A 172 ? GLY A 144 GLY A 172 1 ? 29
HELX_P HELX_P7 AA7 SER A 177 ? SER A 197 ? SER A 177 SER A 197 1 ? 21
HELX_P HELX_P8 AA8 GLY A 211 ? THR A 224 ? GLY A 211 THR A 224 1 ? 14
HELX_P HELX_P9 AA9 LYS A 226 ? TYR A 235 ? LYS A 226 TYR A 235 1 ? 10
HELX_P HELX_P10 AB1 ASN A 241 ? GLY A 260 ? ASN A 241 GLY A 260 1 ? 20
HELX_P HELX_P11 AB2 ASN A 288 ? PHE A 312 ? ASN A 288 PHE A 312 1 ? 25
HELX_P HELX_P12 AB3 ASN A 315 ? GLY A 322 ? ASN A 315 GLY A 322 1 ? 8
HELX_P HELX_P13 AB4 GLY A 340 ? LEU A 345 ? GLY A 340 LEU A 345 1 ? 6
HELX_P HELX_P14 AB5 SER A 350 ? ASP A 357 ? SER A 350 ASP A 357 1 ? 8
HELX_P HELX_P15 AB6 ASP A 357 ? SER A 383 ? ASP A 357 SER A 383 1 ? 27
HELX_P HELX_P16 AB7 SER A 386 ? GLY A 398 ? SER A 386 GLY A 398 1 ? 13
HELX_P HELX_P17 AB8 ILE A 409 ? LYS A 415 ? ILE A 409 LYS A 415 1 ? 7
HELX_P HELX_P18 AB9 ILE A 416 ? GLY A 439 ? ILE A 416 GLY A 439 1 ? 24
HELX_P HELX_P19 AC1 GLY A 442 ? VAL A 468 ? GLY A 442 VAL A 468 1 ? 27
HELX_P HELX_P20 AC2 PHE B 7 ? CYS B 25 ? PHE B 7 CYS B 25 1 ? 19
HELX_P HELX_P21 AC3 ASP B 29 ? VAL B 66 ? ASP B 29 VAL B 66 1 ? 38
HELX_P HELX_P22 AC4 PRO C 70 ? SER C 96 ? PRO C 70 SER C 96 1 ? 27
#
_struct_conf_type.id HELX_P
_struct_conf_type.criteria ?
_struct_conf_type.reference ?
#
loop_
_struct_sheet.id
_struct_sheet.type
_struct_sheet.number_strands
_struct_sheet.details
AA1 ? 2 ?
AA2 ? 3 ?
AA3 ? 2 ?
#
loop_
_struct_sheet_order.sheet_id
_struct_sheet_order.range_id_1
_struct_sheet_order.range_id_2
_struct_sheet_order.offset
_struct_sheet_order.sense
AA1 1 2 ? parallel
AA2 1 2 ? anti-parallel
AA2 2 3 ? anti-parallel
AA3 1 2 ? anti-parallel
#
loop_
_struct_sheet_range.sheet_id
_struct_sheet_range.id
_struct_sheet_range.beg_label_comp_id
_struct_sheet_range.beg_label_asym_id
_struct_sheet_range.beg_label_seq_id
_struct_sheet_range.pdbx_beg_PDB_ins_code
_struct_sheet_range.end_label_comp_id
_struct_sheet_range.end_label_asym_id
_struct_sheet_range.end_label_seq_id
_struct_sheet_range.pdbx_end_PDB_ins_code
_struct_sheet_range.beg_auth_comp_id
_struct_sheet_range.beg_auth_asym_id
_struct_sheet_range.beg_auth_seq_id
_struct_sheet_range.end_auth_comp_id
_struct_sheet_range.end_auth_asym_id
_struct_sheet_range.end_auth_seq_id
AA1 1 GLU A 18 ? ILE A 19 ? GLU A 18 ILE A 19
AA1 2 LYS C 67 ? VAL C 68 ? LYS C 67 VAL C 68
AA2 1 GLY A 277 ? LYS A 282 ? GLY A 277 LYS A 282
AA2 2 ARG A 262 ? SER A 269 ? ARG A 262 SER A 269
AA2 3 MET A 399 ? ILE A 401 ? MET A 399 ILE A 401
AA3 1 THR A 323 ? SER A 325 ? THR A 323 SER A 325
AA3 2 TYR A 336 ? GLY A 339 ? TYR A 336 GLY A 339
#
loop_
_pdbx_struct_sheet_hbond.sheet_id
_pdbx_struct_sheet_hbond.range_id_1
_pdbx_struct_sheet_hbond.range_id_2
_pdbx_struct_sheet_hbond.range_1_label_atom_id
_pdbx_struct_sheet_hbond.range_1_label_comp_id
_pdbx_struct_sheet_hbond.range_1_label_asym_id
_pdbx_struct_sheet_hbond.range_1_label_seq_id
_pdbx_struct_sheet_hbond.range_1_PDB_ins_code
_pdbx_struct_sheet_hbond.range_1_auth_atom_id
_pdbx_struct_sheet_hbond.range_1_auth_comp_id
_pdbx_struct_sheet_hbond.range_1_auth_asym_id
_pdbx_struct_sheet_hbond.range_1_auth_seq_id
_pdbx_struct_sheet_hbond.range_2_label_atom_id
_pdbx_struct_sheet_hbond.range_2_label_comp_id
_pdbx_struct_sheet_hbond.range_2_label_asym_id
_pdbx_struct_sheet_hbond.range_2_label_seq_id
_pdbx_struct_sheet_hbond.range_2_PDB_ins_code
_pdbx_struct_sheet_hbond.range_2_auth_atom_id
_pdbx_struct_sheet_hbond.range_2_auth_comp_id
_pdbx_struct_sheet_hbond.range_2_auth_asym_id
_pdbx_struct_sheet_hbond.range_2_auth_seq_id
AA1 1 2 N GLU A 18 ? N GLU A 18 O VAL C 68 ? O VAL C 68
AA2 1 2 O TYR A 279 ? O TYR A 279 N LEU A 265 ? N LEU A 265
AA2 2 3 N ARG A 268 ? N ARG A 268 O VAL A 400 ? O VAL A 400
AA3 1 2 N THR A 323 ? N THR A 323 O GLY A 339 ? O GLY A 339
#
_atom_sites.entry_id 8DO1
_atom_sites.Cartn_transf_matrix[1][1] ?
_atom_sites.Cartn_transf_matrix[1][2] ?
_atom_sites.Cartn_transf_matrix[1][3] ?
_atom_sites.Cartn_transf_matrix[2][1] ?
_atom_sites.Cartn_transf_matrix[2][2] ?
_atom_sites.Cartn_transf_matrix[2][3] ?
_atom_sites.Cartn_transf_matrix[3][1] ?
_atom_sites.Cartn_transf_matrix[3][2] ?
_atom_sites.Cartn_transf_matrix[3][3] ?
_atom_sites.Cartn_transf_vector[1] ?
_atom_sites.Cartn_transf_vector[2] ?
_atom_sites.Cartn_transf_vector[3] ?
_atom_sites.fract_transf_matrix[1][1] 1.000000
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 1.000000
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 1.000000
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
_atom_sites.solution_primary ?
_atom_sites.solution_secondary ?
_atom_sites.solution_hydrogens ?
_atom_sites.special_details ?
#
loop_
_atom_type.symbol
C
H
N
O
S
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 MET 1 1 ? ? ? A . n
A 1 2 ALA 2 2 ? ? ? A . n
A 1 3 ILE 3 3 3 ILE ALA A . n
A 1 4 LYS 4 4 4 LYS LYS A . n
A 1 5 PHE 5 5 5 PHE PHE A . n
A 1 6 LEU 6 6 6 LEU LEU A . n
A 1 7 GLU 7 7 7 GLU GLU A . n
A 1 8 VAL 8 8 8 VAL VAL A . n
A 1 9 ILE 9 9 9 ILE ILE A . n
A 1 10 LYS 10 10 10 LYS LYS A . n
A 1 11 PRO 11 11 11 PRO PRO A . n
A 1 12 PHE 12 12 12 PHE PHE A . n
A 1 13 CYS 13 13 13 CYS CYS A . n
A 1 14 VAL 14 14 14 VAL VAL A . n
A 1 15 ILE 15 15 15 ILE ILE A . n
A 1 16 LEU 16 16 16 LEU LEU A . n
A 1 17 PRO 17 17 17 PRO PRO A . n
A 1 18 GLU 18 18 18 GLU GLU A . n
A 1 19 ILE 19 19 19 ILE ILE A . n
A 1 20 GLN 20 20 20 GLN GLN A . n
A 1 21 LYS 21 21 21 LYS LYS A . n
A 1 22 PRO 22 22 22 PRO PRO A . n
A 1 23 GLU 23 23 23 GLU GLU A . n
A 1 24 ARG 24 24 24 ARG ARG A . n
A 1 25 LYS 25 25 25 LYS LYS A . n
A 1 26 ILE 26 26 26 ILE ILE A . n
A 1 27 GLN 27 27 27 GLN GLN A . n
A 1 28 PHE 28 28 28 PHE PHE A . n
A 1 29 LYS 29 29 29 LYS LYS A . n
A 1 30 GLU 30 30 30 GLU GLU A . n
A 1 31 LYS 31 31 31 LYS LYS A . n
A 1 32 VAL 32 32 32 VAL VAL A . n
A 1 33 LEU 33 33 33 LEU LEU A . n
A 1 34 TRP 34 34 34 TRP TRP A . n
A 1 35 THR 35 35 35 THR THR A . n
A 1 36 ALA 36 36 36 ALA ALA A . n
A 1 37 ILE 37 37 37 ILE ILE A . n
A 1 38 THR 38 38 38 THR THR A . n
A 1 39 LEU 39 39 39 LEU LEU A . n
A 1 40 PHE 40 40 40 PHE PHE A . n
A 1 41 ILE 41 41 41 ILE ILE A . n
A 1 42 PHE 42 42 42 PHE PHE A . n
A 1 43 LEU 43 43 43 LEU LEU A . n
A 1 44 VAL 44 44 44 VAL VAL A . n
A 1 45 CYS 45 45 45 CYS CYS A . n
A 1 46 CYS 46 46 46 CYS CYS A . n
A 1 47 GLN 47 47 47 GLN GLN A . n
A 1 48 ILE 48 48 48 ILE ILE A . n
A 1 49 PRO 49 49 49 PRO PRO A . n
A 1 50 LEU 50 50 50 LEU LEU A . n
A 1 51 PHE 51 51 51 PHE PHE A . n
A 1 52 GLY 52 52 52 GLY GLY A . n
A 1 53 ILE 53 53 53 ILE ILE A . n
A 1 54 MET 54 54 54 MET MET A . n
A 1 55 SER 55 55 55 SER SER A . n
A 1 56 SER 56 56 56 SER SER A . n
A 1 57 ASP 57 57 57 ASP ASP A . n
A 1 58 SER 58 58 58 SER SER A . n
A 1 59 ALA 59 59 59 ALA ALA A . n
A 1 60 ASP 60 60 60 ASP ASP A . n
A 1 61 PRO 61 61 61 PRO PRO A . n
A 1 62 PHE 62 62 62 PHE PHE A . n
A 1 63 TYR 63 63 63 TYR TYR A . n
A 1 64 TRP 64 64 64 TRP TRP A . n
A 1 65 MET 65 65 65 MET MET A . n
A 1 66 ARG 66 66 66 ARG ARG A . n
A 1 67 VAL 67 67 67 VAL VAL A . n
A 1 68 ILE 68 68 68 ILE ILE A . n
A 1 69 LEU 69 69 69 LEU LEU A . n
A 1 70 ALA 70 70 70 ALA ALA A . n
A 1 71 SER 71 71 71 SER SER A . n
A 1 72 ASN 72 72 72 ASN ASN A . n
A 1 73 ARG 73 73 73 ARG ARG A . n
A 1 74 GLY 74 74 74 GLY GLY A . n
A 1 75 THR 75 75 75 THR THR A . n
A 1 76 LEU 76 76 76 LEU LEU A . n
A 1 77 MET 77 77 77 MET MET A . n
A 1 78 GLU 78 78 78 GLU GLU A . n
A 1 79 LEU 79 79 79 LEU LEU A . n
A 1 80 GLY 80 80 80 GLY GLY A . n
A 1 81 ILE 81 81 81 ILE ILE A . n
A 1 82 SER 82 82 82 SER SER A . n
A 1 83 PRO 83 83 83 PRO PRO A . n
A 1 84 ILE 84 84 84 ILE ILE A . n
A 1 85 VAL 85 85 85 VAL VAL A . n
A 1 86 THR 86 86 86 THR THR A . n
A 1 87 SER 87 87 87 SER SER A . n
A 1 88 GLY 88 88 88 GLY GLY A . n
A 1 89 LEU 89 89 89 LEU LEU A . n
A 1 90 ILE 90 90 90 ILE ILE A . n
A 1 91 MET 91 91 91 MET MET A . n
A 1 92 GLN 92 92 92 GLN GLN A . n
A 1 93 LEU 93 93 93 LEU LEU A . n
A 1 94 LEU 94 94 94 LEU LEU A . n
A 1 95 ALA 95 95 95 ALA ALA A . n
A 1 96 GLY 96 96 96 GLY GLY A . n
A 1 97 ALA 97 97 97 ALA ALA A . n
A 1 98 LYS 98 98 98 LYS LYS A . n
A 1 99 ILE 99 99 99 ILE ILE A . n
A 1 100 ILE 100 100 100 ILE ILE A . n
A 1 101 GLU 101 101 101 GLU GLU A . n
A 1 102 VAL 102 102 102 VAL VAL A . n
A 1 103 GLY 103 103 103 GLY GLY A . n
A 1 104 ASP 104 104 104 ASP ASP A . n
A 1 105 THR 105 105 105 THR THR A . n
A 1 106 PRO 106 106 106 PRO PRO A . n
A 1 107 LYS 107 107 107 LYS LYS A . n
A 1 108 ASP 108 108 108 ASP ASP A . n
A 1 109 ARG 109 109 109 ARG ARG A . n
A 1 110 ALA 110 110 110 ALA ALA A . n
A 1 111 LEU 111 111 111 LEU LEU A . n
A 1 112 PHE 112 112 112 PHE PHE A . n
A 1 113 ASN 113 113 113 ASN ASN A . n
A 1 114 GLY 114 114 114 GLY GLY A . n
A 1 115 ALA 115 115 115 ALA ALA A . n
A 1 116 GLN 116 116 116 GLN GLN A . n
A 1 117 LYS 117 117 117 LYS LYS A . n
A 1 118 LEU 118 118 118 LEU LEU A . n
A 1 119 PHE 119 119 119 PHE PHE A . n
A 1 120 GLY 120 120 120 GLY GLY A . n
A 1 121 MET 121 121 121 MET MET A . n
A 1 122 ILE 122 122 122 ILE ILE A . n
A 1 123 ILE 123 123 123 ILE ILE A . n
A 1 124 THR 124 124 124 THR THR A . n
A 1 125 ILE 125 125 125 ILE ILE A . n
A 1 126 GLY 126 126 126 GLY GLY A . n
A 1 127 GLN 127 127 127 GLN GLN A . n
A 1 128 SER 128 128 128 SER SER A . n
A 1 129 ILE 129 129 129 ILE ILE A . n
A 1 130 VAL 130 130 130 VAL VAL A . n
A 1 131 TYR 131 131 131 TYR TYR A . n
A 1 132 VAL 132 132 132 VAL VAL A . n
A 1 133 MET 133 133 133 MET MET A . n
A 1 134 THR 134 134 134 THR THR A . n
A 1 135 GLY 135 135 135 GLY GLY A . n
A 1 136 MET 136 136 136 MET MET A . n
A 1 137 TYR 137 137 137 TYR TYR A . n
A 1 138 GLY 138 138 138 GLY GLY A . n
A 1 139 ASP 139 139 139 ASP ASP A . n
A 1 140 PRO 140 140 140 PRO PRO A . n
A 1 141 SER 141 141 141 SER SER A . n
A 1 142 GLU 142 142 142 GLU GLU A . n
A 1 143 MET 143 143 143 MET MET A . n
A 1 144 GLY 144 144 144 GLY GLY A . n
A 1 145 ALA 145 145 145 ALA ALA A . n
A 1 146 GLY 146 146 146 GLY GLY A . n
A 1 147 ILE 147 147 147 ILE ILE A . n
A 1 148 CYS 148 148 148 CYS CYS A . n
A 1 149 LEU 149 149 149 LEU LEU A . n
A 1 150 LEU 150 150 150 LEU LEU A . n
A 1 151 ILE 151 151 151 ILE ILE A . n
A 1 152 THR 152 152 152 THR THR A . n
A 1 153 ILE 153 153 153 ILE ILE A . n
A 1 154 GLN 154 154 154 GLN GLN A . n
A 1 155 LEU 155 155 155 LEU LEU A . n
A 1 156 PHE 156 156 156 PHE PHE A . n
A 1 157 VAL 157 157 157 VAL VAL A . n
A 1 158 ALA 158 158 158 ALA ALA A . n
A 1 159 GLY 159 159 159 GLY GLY A . n
A 1 160 LEU 160 160 160 LEU LEU A . n
A 1 161 ILE 161 161 161 ILE ILE A . n
A 1 162 VAL 162 162 162 VAL VAL A . n
A 1 163 LEU 163 163 163 LEU LEU A . n
A 1 164 LEU 164 164 164 LEU LEU A . n
A 1 165 LEU 165 165 165 LEU LEU A . n
A 1 166 ASP 166 166 166 ASP ASP A . n
A 1 167 GLU 167 167 167 GLU GLU A . n
A 1 168 LEU 168 168 168 LEU LEU A . n
A 1 169 LEU 169 169 169 LEU LEU A . n
A 1 170 GLN 170 170 170 GLN GLN A . n
A 1 171 LYS 171 171 171 LYS LYS A . n
A 1 172 GLY 172 172 172 GLY GLY A . n
A 1 173 TYR 173 173 173 TYR TYR A . n
A 1 174 GLY 174 174 174 GLY GLY A . n
A 1 175 LEU 175 175 175 LEU LEU A . n
A 1 176 GLY 176 176 176 GLY GLY A . n
A 1 177 SER 177 177 177 SER SER A . n
A 1 178 GLY 178 178 178 GLY GLY A . n
A 1 179 ILE 179 179 179 ILE ILE A . n
A 1 180 SER 180 180 180 SER SER A . n
A 1 181 LEU 181 181 181 LEU LEU A . n
A 1 182 PHE 182 182 182 PHE PHE A . n
A 1 183 ILE 183 183 183 ILE ILE A . n
A 1 184 ALA 184 184 184 ALA ALA A . n
A 1 185 THR 185 185 185 THR THR A . n
A 1 186 ASN 186 186 186 ASN ASN A . n
A 1 187 ILE 187 187 187 ILE ILE A . n
A 1 188 CYS 188 188 188 CYS CYS A . n
A 1 189 GLU 189 189 189 GLU GLU A . n
A 1 190 THR 190 190 190 THR THR A . n
A 1 191 ILE 191 191 191 ILE ILE A . n
A 1 192 VAL 192 192 192 VAL VAL A . n
A 1 193 TRP 193 193 193 TRP TRP A . n
A 1 194 LYS 194 194 194 LYS LYS A . n
A 1 195 ALA 195 195 195 ALA ALA A . n
A 1 196 PHE 196 196 196 PHE PHE A . n
A 1 197 SER 197 197 197 SER SER A . n
A 1 198 PRO 198 198 198 PRO PRO A . n
A 1 199 THR 199 199 199 THR THR A . n
A 1 200 THR 200 200 200 THR THR A . n
A 1 201 VAL 201 201 201 VAL VAL A . n
A 1 202 ASN 202 202 202 ASN ASN A . n
A 1 203 THR 203 203 203 THR THR A . n
A 1 204 GLY 204 204 204 GLY GLY A . n
A 1 205 ARG 205 205 205 ARG ARG A . n
A 1 206 GLY 206 206 206 GLY GLY A . n
A 1 207 MET 207 207 207 MET MET A . n
A 1 208 GLU 208 208 208 GLU GLU A . n
A 1 209 PHE 209 209 209 PHE PHE A . n
A 1 210 GLU 210 210 210 GLU GLU A . n
A 1 211 GLY 211 211 211 GLY GLY A . n
A 1 212 ALA 212 212 212 ALA ALA A . n
A 1 213 ILE 213 213 213 ILE ILE A . n
A 1 214 ILE 214 214 214 ILE ILE A . n
A 1 215 ALA 215 215 215 ALA ALA A . n
A 1 216 LEU 216 216 216 LEU LEU A . n
A 1 217 PHE 217 217 217 PHE PHE A . n
A 1 218 HIS 218 218 218 HIS HIS A . n
A 1 219 LEU 219 219 219 LEU LEU A . n
A 1 220 LEU 220 220 220 LEU LEU A . n
A 1 221 ALA 221 221 221 ALA ALA A . n
A 1 222 THR 222 222 222 THR THR A . n
A 1 223 ARG 223 223 223 ARG ARG A . n
A 1 224 THR 224 224 224 THR THR A . n
A 1 225 ASP 225 225 225 ASP ASP A . n
A 1 226 LYS 226 226 226 LYS LYS A . n
A 1 227 VAL 227 227 227 VAL VAL A . n
A 1 228 ARG 228 228 228 ARG ARG A . n
A 1 229 ALA 229 229 229 ALA ALA A . n
A 1 230 LEU 230 230 230 LEU LEU A . n
A 1 231 ARG 231 231 231 ARG ARG A . n
A 1 232 GLU 232 232 232 GLU GLU A . n
A 1 233 ALA 233 233 233 ALA ALA A . n
A 1 234 PHE 234 234 234 PHE PHE A . n
A 1 235 TYR 235 235 235 TYR TYR A . n
A 1 236 ARG 236 236 236 ARG ARG A . n
A 1 237 GLN 237 237 237 GLN GLN A . n
A 1 238 ASN 238 238 238 ASN ASN A . n
A 1 239 LEU 239 239 239 LEU LEU A . n
A 1 240 PRO 240 240 240 PRO PRO A . n
A 1 241 ASN 241 241 241 ASN ASN A . n
A 1 242 LEU 242 242 242 LEU LEU A . n
A 1 243 MET 243 243 243 MET MET A . n
A 1 244 ASN 244 244 244 ASN ASN A . n
A 1 245 LEU 245 245 245 LEU LEU A . n
A 1 246 ILE 246 246 246 ILE ILE A . n
A 1 247 ALA 247 247 247 ALA ALA A . n
A 1 248 THR 248 248 248 THR THR A . n
A 1 249 ILE 249 249 249 ILE ILE A . n
A 1 250 PHE 250 250 250 PHE PHE A . n
A 1 251 VAL 251 251 251 VAL VAL A . n
A 1 252 PHE 252 252 252 PHE PHE A . n
A 1 253 ALA 253 253 253 ALA ALA A . n
A 1 254 VAL 254 254 254 VAL VAL A . n
A 1 255 VAL 255 255 255 VAL VAL A . n
A 1 256 ILE 256 256 256 ILE ILE A . n
A 1 257 TYR 257 257 257 TYR TYR A . n
A 1 258 PHE 258 258 258 PHE PHE A . n
A 1 259 GLN 259 259 259 GLN GLN A . n
A 1 260 GLY 260 260 260 GLY GLY A . n
A 1 261 PHE 261 261 261 PHE PHE A . n
A 1 262 ARG 262 262 262 ARG ARG A . n
A 1 263 TYR 263 263 263 TYR TYR A . n
A 1 264 GLU 264 264 264 GLU GLU A . n
A 1 265 LEU 265 265 265 LEU LEU A . n
A 1 266 PRO 266 266 266 PRO PRO A . n
A 1 267 ILE 267 267 267 ILE ILE A . n
A 1 268 ARG 268 268 268 ARG ARG A . n
A 1 269 SER 269 269 269 SER SER A . n
A 1 270 THR 270 270 270 THR THR A . n
A 1 271 LYS 271 271 271 LYS LYS A . n
A 1 272 VAL 272 272 272 VAL VAL A . n
A 1 273 ARG 273 273 273 ARG ARG A . n
A 1 274 GLY 274 274 274 GLY GLY A . n
A 1 275 GLN 275 275 275 GLN GLN A . n
A 1 276 ILE 276 276 276 ILE ILE A . n
A 1 277 GLY 277 277 277 GLY GLY A . n
A 1 278 ILE 278 278 278 ILE ILE A . n
A 1 279 TYR 279 279 279 TYR TYR A . n
A 1 280 PRO 280 280 280 PRO PRO A . n
A 1 281 ILE 281 281 281 ILE ILE A . n
A 1 282 LYS 282 282 282 LYS LYS A . n
A 1 283 LEU 283 283 283 LEU LEU A . n
A 1 284 PHE 284 284 284 PHE PHE A . n
A 1 285 TYR 285 285 285 TYR TYR A . n
A 1 286 THR 286 286 286 THR THR A . n
A 1 287 SER 287 287 287 SER SER A . n
A 1 288 ASN 288 288 288 ASN ASN A . n
A 1 289 ILE 289 289 289 ILE ILE A . n
A 1 290 PRO 290 290 290 PRO PRO A . n
A 1 291 ILE 291 291 291 ILE ILE A . n
A 1 292 ILE 292 292 292 ILE ILE A . n
A 1 293 LEU 293 293 293 LEU LEU A . n
A 1 294 GLN 294 294 294 GLN GLN A . n
A 1 295 SER 295 295 295 SER SER A . n
A 1 296 ALA 296 296 296 ALA ALA A . n
A 1 297 LEU 297 297 297 LEU LEU A . n
A 1 298 VAL 298 298 298 VAL VAL A . n
A 1 299 SER 299 299 299 SER SER A . n
A 1 300 ASN 300 300 300 ASN ASN A . n
A 1 301 LEU 301 301 301 LEU LEU A . n
A 1 302 TYR 302 302 302 TYR TYR A . n
A 1 303 VAL 303 303 303 VAL VAL A . n
A 1 304 ILE 304 304 304 ILE ILE A . n
A 1 305 SER 305 305 305 SER SER A . n
A 1 306 GLN 306 306 306 GLN GLN A . n
A 1 307 MET 307 307 307 MET MET A . n
A 1 308 LEU 308 308 308 LEU LEU A . n
A 1 309 SER 309 309 309 SER SER A . n
A 1 310 ALA 310 310 310 ALA ALA A . n
A 1 311 ARG 311 311 311 ARG ARG A . n
A 1 312 PHE 312 312 312 PHE PHE A . n
A 1 313 SER 313 313 313 SER SER A . n
A 1 314 GLY 314 314 314 GLY GLY A . n
A 1 315 ASN 315 315 315 ASN ASN A . n
A 1 316 LEU 316 316 316 LEU LEU A . n
A 1 317 LEU 317 317 317 LEU LEU A . n
A 1 318 VAL 318 318 318 VAL VAL A . n
A 1 319 SER 319 319 319 SER SER A . n
A 1 320 LEU 320 320 320 LEU LEU A . n
A 1 321 LEU 321 321 321 LEU LEU A . n
A 1 322 GLY 322 322 322 GLY GLY A . n
A 1 323 THR 323 323 323 THR THR A . n
A 1 324 TRP 324 324 324 TRP TRP A . n
A 1 325 SER 325 325 325 SER SER A . n
A 1 326 ASP 326 326 ? ? ? A . n
A 1 327 THR 327 327 ? ? ? A . n
A 1 328 SER 328 328 ? ? ? A . n
A 1 329 SER 329 329 ? ? ? A . n
A 1 330 GLY 330 330 ? ? ? A . n
A 1 331 GLY 331 331 ? ? ? A . n
A 1 332 PRO 332 332 ? ? ? A . n
A 1 333 ALA 333 333 ? ? ? A . n
A 1 334 ARG 334 334 334 ARG ARG A . n
A 1 335 ALA 335 335 335 ALA ALA A . n
A 1 336 TYR 336 336 336 TYR TYR A . n
A 1 337 PRO 337 337 337 PRO PRO A . n
A 1 338 VAL 338 338 338 VAL VAL A . n
A 1 339 GLY 339 339 339 GLY GLY A . n
A 1 340 GLY 340 340 340 GLY GLY A . n
A 1 341 LEU 341 341 341 LEU LEU A . n
A 1 342 CYS 342 342 342 CYS CYS A . n
A 1 343 TYR 343 343 343 TYR TYR A . n
A 1 344 TYR 344 344 344 TYR TYR A . n
A 1 345 LEU 345 345 345 LEU LEU A . n
A 1 346 SER 346 346 346 SER SER A . n
A 1 347 PRO 347 347 347 PRO PRO A . n
A 1 348 PRO 348 348 348 PRO PRO A . n
A 1 349 GLU 349 349 349 GLU GLU A . n
A 1 350 SER 350 350 350 SER SER A . n
A 1 351 PHE 351 351 351 PHE PHE A . n
A 1 352 GLY 352 352 352 GLY GLY A . n
A 1 353 SER 353 353 353 SER SER A . n
A 1 354 VAL 354 354 354 VAL VAL A . n
A 1 355 LEU 355 355 355 LEU LEU A . n
A 1 356 GLU 356 356 356 GLU GLU A . n
A 1 357 ASP 357 357 357 ASP ASP A . n
A 1 358 PRO 358 358 358 PRO PRO A . n
A 1 359 VAL 359 359 359 VAL VAL A . n
A 1 360 HIS 360 360 360 HIS HIS A . n
A 1 361 ALA 361 361 361 ALA ALA A . n
A 1 362 VAL 362 362 362 VAL VAL A . n
A 1 363 VAL 363 363 363 VAL VAL A . n
A 1 364 TYR 364 364 364 TYR TYR A . n
A 1 365 ILE 365 365 365 ILE ILE A . n
A 1 366 VAL 366 366 366 VAL VAL A . n
A 1 367 PHE 367 367 367 PHE PHE A . n
A 1 368 MET 368 368 368 MET MET A . n
A 1 369 LEU 369 369 369 LEU LEU A . n
A 1 370 GLY 370 370 370 GLY GLY A . n
A 1 371 SER 371 371 371 SER SER A . n
A 1 372 CYS 372 372 372 CYS CYS A . n
A 1 373 ALA 373 373 373 ALA ALA A . n
A 1 374 PHE 374 374 374 PHE PHE A . n
A 1 375 PHE 375 375 375 PHE PHE A . n
A 1 376 SER 376 376 376 SER SER A . n
A 1 377 LYS 377 377 377 LYS LYS A . n
A 1 378 THR 378 378 378 THR THR A . n
A 1 379 TRP 379 379 379 TRP TRP A . n
A 1 380 ILE 380 380 380 ILE ILE A . n
A 1 381 GLU 381 381 381 GLU GLU A . n
A 1 382 VAL 382 382 382 VAL VAL A . n
A 1 383 SER 383 383 383 SER SER A . n
A 1 384 GLY 384 384 384 GLY GLY A . n
A 1 385 SER 385 385 385 SER SER A . n
A 1 386 SER 386 386 386 SER SER A . n
A 1 387 PRO 387 387 387 PRO PRO A . n
A 1 388 ARG 388 388 388 ARG ARG A . n
A 1 389 ASP 389 389 389 ASP ASP A . n
A 1 390 ILE 390 390 390 ILE ILE A . n
A 1 391 ALA 391 391 391 ALA ALA A . n
A 1 392 LYS 392 392 392 LYS LYS A . n
A 1 393 GLN 393 393 393 GLN GLN A . n
A 1 394 PHE 394 394 394 PHE PHE A . n
A 1 395 LYS 395 395 395 LYS LYS A . n
A 1 396 ASP 396 396 396 ASP ASP A . n
A 1 397 GLN 397 397 397 GLN GLN A . n
A 1 398 GLY 398 398 398 GLY GLY A . n
A 1 399 MET 399 399 399 MET MET A . n
A 1 400 VAL 400 400 400 VAL VAL A . n
A 1 401 ILE 401 401 401 ILE ILE A . n
A 1 402 ASN 402 402 402 ASN ASN A . n
A 1 403 GLY 403 403 403 GLY GLY A . n
A 1 404 LYS 404 404 404 LYS LYS A . n
A 1 405 ARG 405 405 405 ARG ARG A . n
A 1 406 GLU 406 406 406 GLU GLU A . n
A 1 407 THR 407 407 407 THR THR A . n
A 1 408 SER 408 408 408 SER SER A . n
A 1 409 ILE 409 409 409 ILE ILE A . n
A 1 410 TYR 410 410 410 TYR TYR A . n
A 1 411 ARG 411 411 411 ARG ARG A . n
A 1 412 GLU 412 412 412 GLU GLU A . n
A 1 413 LEU 413 413 413 LEU LEU A . n
A 1 414 LYS 414 414 414 LYS LYS A . n
A 1 415 LYS 415 415 415 LYS LYS A . n
A 1 416 ILE 416 416 416 ILE ILE A . n
A 1 417 ILE 417 417 417 ILE ILE A . n
A 1 418 PRO 418 418 418 PRO PRO A . n
A 1 419 THR 419 419 419 THR THR A . n
A 1 420 ALA 420 420 420 ALA ALA A . n
A 1 421 ALA 421 421 421 ALA ALA A . n
A 1 422 ALA 422 422 422 ALA ALA A . n
A 1 423 PHE 423 423 423 PHE PHE A . n
A 1 424 GLY 424 424 424 GLY GLY A . n
A 1 425 GLY 425 425 425 GLY GLY A . n
A 1 426 LEU 426 426 426 LEU LEU A . n
A 1 427 CYS 427 427 427 CYS CYS A . n
A 1 428 ILE 428 428 428 ILE ILE A . n
A 1 429 GLY 429 429 429 GLY GLY A . n
A 1 430 ALA 430 430 430 ALA ALA A . n
A 1 431 LEU 431 431 431 LEU LEU A . n
A 1 432 SER 432 432 432 SER SER A . n
A 1 433 VAL 433 433 433 VAL VAL A . n
A 1 434 LEU 434 434 434 LEU LEU A . n
A 1 435 ALA 435 435 435 ALA ALA A . n
A 1 436 ASP 436 436 436 ASP ASP A . n
A 1 437 PHE 437 437 437 PHE PHE A . n
A 1 438 LEU 438 438 438 LEU LEU A . n
A 1 439 GLY 439 439 439 GLY GLY A . n
A 1 440 ALA 440 440 440 ALA ALA A . n
A 1 441 ILE 441 441 441 ILE ILE A . n
A 1 442 GLY 442 442 442 GLY GLY A . n
A 1 443 SER 443 443 443 SER SER A . n
A 1 444 GLY 444 444 444 GLY GLY A . n
A 1 445 THR 445 445 445 THR THR A . n
A 1 446 GLY 446 446 446 GLY GLY A . n
A 1 447 ILE 447 447 447 ILE ILE A . n
A 1 448 LEU 448 448 448 LEU LEU A . n
A 1 449 LEU 449 449 449 LEU LEU A . n
A 1 450 ALA 450 450 450 ALA ALA A . n
A 1 451 VAL 451 451 451 VAL VAL A . n
A 1 452 THR 452 452 452 THR THR A . n
A 1 453 ILE 453 453 453 ILE ILE A . n
A 1 454 ILE 454 454 454 ILE ILE A . n
A 1 455 TYR 455 455 455 TYR TYR A . n
A 1 456 GLN 456 456 456 GLN GLN A . n
A 1 457 TYR 457 457 457 TYR TYR A . n
A 1 458 PHE 458 458 458 PHE PHE A . n
A 1 459 GLU 459 459 459 GLU GLU A . n
A 1 460 ILE 460 460 460 ILE ILE A . n
A 1 461 PHE 461 461 461 PHE PHE A . n
A 1 462 VAL 462 462 462 VAL VAL A . n
A 1 463 LYS 463 463 463 LYS LYS A . n
A 1 464 GLU 464 464 464 GLU GLU A . n
A 1 465 GLN 465 465 465 GLN GLN A . n
A 1 466 SER 466 466 466 SER SER A . n
A 1 467 GLU 467 467 467 GLU GLU A . n
A 1 468 VAL 468 468 468 VAL VAL A . n
A 1 469 GLY 469 469 ? ? ? A . n
A 1 470 SER 470 470 ? ? ? A . n
A 1 471 MET 471 471 ? ? ? A . n
A 1 472 GLY 472 472 ? ? ? A . n
A 1 473 ALA 473 473 ? ? ? A . n
A 1 474 LEU 474 474 ? ? ? A . n
A 1 475 LEU 475 475 ? ? ? A . n
A 1 476 PHE 476 476 ? ? ? A . n
B 2 1 MET 1 1 ? ? ? B . n
B 2 2 ASP 2 2 ? ? ? B . n
B 2 3 GLN 3 3 ? ? ? B . n
B 2 4 VAL 4 4 ? ? ? B . n
B 2 5 MET 5 5 ? ? ? B . n
B 2 6 GLN 6 6 6 GLN GLN B . n
B 2 7 PHE 7 7 7 PHE PHE B . n
B 2 8 VAL 8 8 8 VAL VAL B . n
B 2 9 GLU 9 9 9 GLU GLU B . n
B 2 10 PRO 10 10 10 PRO PRO B . n
B 2 11 SER 11 11 11 SER SER B . n
B 2 12 ARG 12 12 12 ARG ARG B . n
B 2 13 GLN 13 13 13 GLN GLN B . n
B 2 14 PHE 14 14 14 PHE PHE B . n
B 2 15 VAL 15 15 15 VAL VAL B . n
B 2 16 LYS 16 16 16 LYS LYS B . n
B 2 17 ASP 17 17 17 ASP ASP B . n
B 2 18 SER 18 18 18 SER SER B . n
B 2 19 ILE 19 19 19 ILE ILE B . n
B 2 20 ARG 20 20 20 ARG ARG B . n
B 2 21 LEU 21 21 21 LEU LEU B . n
B 2 22 VAL 22 22 22 VAL VAL B . n
B 2 23 LYS 23 23 23 LYS LYS B . n
B 2 24 ARG 24 24 24 ARG ARG B . n
B 2 25 CYS 25 25 25 CYS CYS B . n
B 2 26 THR 26 26 26 THR THR B . n
B 2 27 LYS 27 27 27 LYS LYS B . n
B 2 28 PRO 28 28 28 PRO PRO B . n
B 2 29 ASP 29 29 29 ASP ASP B . n
B 2 30 ARG 30 30 30 ARG ARG B . n
B 2 31 LYS 31 31 31 LYS LYS B . n
B 2 32 GLU 32 32 32 GLU GLU B . n
B 2 33 PHE 33 33 33 PHE PHE B . n
B 2 34 GLN 34 34 34 GLN GLN B . n
B 2 35 LYS 35 35 35 LYS LYS B . n
B 2 36 ILE 36 36 36 ILE ILE B . n
B 2 37 ALA 37 37 37 ALA ALA B . n
B 2 38 MET 38 38 38 MET MET B . n
B 2 39 ALA 39 39 39 ALA ALA B . n
B 2 40 THR 40 40 40 THR THR B . n
B 2 41 ALA 41 41 41 ALA ALA B . n
B 2 42 ILE 42 42 42 ILE ILE B . n
B 2 43 GLY 43 43 43 GLY GLY B . n
B 2 44 PHE 44 44 44 PHE PHE B . n
B 2 45 ALA 45 45 45 ALA ALA B . n
B 2 46 ILE 46 46 46 ILE ILE B . n
B 2 47 MET 47 47 47 MET MET B . n
B 2 48 GLY 48 48 48 GLY GLY B . n
B 2 49 PHE 49 49 49 PHE PHE B . n
B 2 50 ILE 50 50 50 ILE ILE B . n
B 2 51 GLY 51 51 51 GLY GLY B . n
B 2 52 PHE 52 52 52 PHE PHE B . n
B 2 53 PHE 53 53 53 PHE PHE B . n
B 2 54 VAL 54 54 54 VAL VAL B . n
B 2 55 LYS 55 55 55 LYS LYS B . n
B 2 56 LEU 56 56 56 LEU LEU B . n
B 2 57 ILE 57 57 57 ILE ILE B . n
B 2 58 HIS 58 58 58 HIS HIS B . n
B 2 59 ILE 59 59 59 ILE ILE B . n
B 2 60 PRO 60 60 60 PRO PRO B . n
B 2 61 ILE 61 61 61 ILE ILE B . n
B 2 62 ASN 62 62 62 ASN ASN B . n
B 2 63 ASN 63 63 63 ASN ASN B . n
B 2 64 ILE 64 64 64 ILE ILE B . n
B 2 65 ILE 65 65 65 ILE ILE B . n
B 2 66 VAL 66 66 66 VAL VAL B . n
B 2 67 GLY 67 67 ? ? ? B . n
B 2 68 GLY 68 68 ? ? ? B . n
C 3 1 MET 1 1 ? ? ? C . n
C 3 2 PRO 2 2 ? ? ? C . n
C 3 3 GLY 3 3 ? ? ? C . n
C 3 4 PRO 4 4 ? ? ? C . n
C 3 5 THR 5 5 ? ? ? C . n
C 3 6 PRO 6 6 ? ? ? C . n
C 3 7 SER 7 7 ? ? ? C . n
C 3 8 GLY 8 8 ? ? ? C . n
C 3 9 THR 9 9 ? ? ? C . n
C 3 10 ASN 10 10 ? ? ? C . n
C 3 11 VAL 11 11 ? ? ? C . n
C 3 12 GLY 12 12 ? ? ? C . n
C 3 13 SER 13 13 ? ? ? C . n
C 3 14 SER 14 14 ? ? ? C . n
C 3 15 GLY 15 15 ? ? ? C . n
C 3 16 ARG 16 16 ? ? ? C . n
C 3 17 SER 17 17 ? ? ? C . n
C 3 18 PRO 18 18 ? ? ? C . n
C 3 19 SER 19 19 ? ? ? C . n
C 3 20 LYS 20 20 ? ? ? C . n
C 3 21 ALA 21 21 ? ? ? C . n
C 3 22 VAL 22 22 ? ? ? C . n
C 3 23 ALA 23 23 ? ? ? C . n
C 3 24 ALA 24 24 ? ? ? C . n
C 3 25 ARG 25 25 ? ? ? C . n
C 3 26 ALA 26 26 ? ? ? C . n
C 3 27 ALA 27 27 ? ? ? C . n
C 3 28 GLY 28 28 ? ? ? C . n
C 3 29 SER 29 29 ? ? ? C . n
C 3 30 THR 30 30 ? ? ? C . n
C 3 31 VAL 31 31 ? ? ? C . n
C 3 32 ARG 32 32 ? ? ? C . n
C 3 33 GLN 33 33 ? ? ? C . n
C 3 34 ARG 34 34 ? ? ? C . n
C 3 35 LYS 35 35 ? ? ? C . n
C 3 36 ASN 36 36 ? ? ? C . n
C 3 37 ALA 37 37 ? ? ? C . n
C 3 38 SER 38 38 ? ? ? C . n
C 3 39 CYS 39 39 ? ? ? C . n
C 3 40 GLY 40 40 ? ? ? C . n
C 3 41 THR 41 41 ? ? ? C . n
C 3 42 ARG 42 42 ? ? ? C . n
C 3 43 SER 43 43 ? ? ? C . n
C 3 44 ALA 44 44 ? ? ? C . n
C 3 45 GLY 45 45 ? ? ? C . n
C 3 46 ARG 46 46 ? ? ? C . n
C 3 47 THR 47 47 ? ? ? C . n
C 3 48 THR 48 48 ? ? ? C . n
C 3 49 SER 49 49 ? ? ? C . n
C 3 50 ALA 50 50 ? ? ? C . n
C 3 51 GLY 51 51 ? ? ? C . n
C 3 52 THR 52 52 ? ? ? C . n
C 3 53 GLY 53 53 ? ? ? C . n
C 3 54 GLY 54 54 ? ? ? C . n
C 3 55 MET 55 55 ? ? ? C . n
C 3 56 TRP 56 56 ? ? ? C . n
C 3 57 ARG 57 57 ? ? ? C . n
C 3 58 PHE 58 58 ? ? ? C . n
C 3 59 TYR 59 59 ? ? ? C . n
C 3 60 THR 60 60 ? ? ? C . n
C 3 61 GLU 61 61 ? ? ? C . n
C 3 62 ASP 62 62 ? ? ? C . n
C 3 63 SER 63 63 ? ? ? C . n
C 3 64 PRO 64 64 ? ? ? C . n
C 3 65 GLY 65 65 65 GLY GLY C . n
C 3 66 LEU 66 66 66 LEU LEU C . n
C 3 67 LYS 67 67 67 LYS LYS C . n
C 3 68 VAL 68 68 68 VAL VAL C . n
C 3 69 GLY 69 69 69 GLY GLY C . n
C 3 70 PRO 70 70 70 PRO PRO C . n
C 3 71 VAL 71 71 71 VAL VAL C . n
C 3 72 PRO 72 72 72 PRO PRO C . n
C 3 73 VAL 73 73 73 VAL VAL C . n
C 3 74 LEU 74 74 74 LEU LEU C . n
C 3 75 VAL 75 75 75 VAL VAL C . n
C 3 76 MET 76 76 76 MET MET C . n
C 3 77 SER 77 77 77 SER SER C . n
C 3 78 LEU 78 78 78 LEU LEU C . n
C 3 79 LEU 79 79 79 LEU LEU C . n
C 3 80 PHE 80 80 80 PHE PHE C . n
C 3 81 ILE 81 81 81 ILE ILE C . n
C 3 82 ALA 82 82 82 ALA ALA C . n
C 3 83 SER 83 83 83 SER SER C . n
C 3 84 VAL 84 84 84 VAL VAL C . n
C 3 85 PHE 85 85 85 PHE PHE C . n
C 3 86 MET 86 86 86 MET MET C . n
C 3 87 LEU 87 87 87 LEU LEU C . n
C 3 88 HIS 88 88 88 HIS HIS C . n
C 3 89 ILE 89 89 89 ILE ILE C . n
C 3 90 TRP 90 90 90 TRP TRP C . n
C 3 91 GLY 91 91 91 GLY GLY C . n
C 3 92 LYS 92 92 92 LYS LYS C . n
C 3 93 TYR 93 93 93 TYR TYR C . n
C 3 94 THR 94 94 94 THR THR C . n
C 3 95 ARG 95 95 95 ARG ARG C . n
C 3 96 SER 96 96 96 SER SER C . n
#
_pdbx_contact_author.id 2
_pdbx_contact_author.email eunyong_park@berkeley.edu
_pdbx_contact_author.name_first Eunyong
_pdbx_contact_author.name_last Park
_pdbx_contact_author.name_mi ?
_pdbx_contact_author.role 'principal investigator/group leader'
_pdbx_contact_author.identifier_ORCID 0000-0003-2994-5174
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 SXF 1 501 501 SXF LIG A .
E 5 HOH 1 601 1 HOH HOH A .
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_defined_assembly
_pdbx_struct_assembly.method_details ?
_pdbx_struct_assembly.oligomeric_details trimeric
_pdbx_struct_assembly.oligomeric_count 3
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1
_pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E
#
_pdbx_struct_oper_list.id 1
_pdbx_struct_oper_list.type 'identity operation'
_pdbx_struct_oper_list.name 1_555
_pdbx_struct_oper_list.symmetry_operation ?
_pdbx_struct_oper_list.matrix[1][1] 1.0000000000
_pdbx_struct_oper_list.matrix[1][2] 0.0000000000
_pdbx_struct_oper_list.matrix[1][3] 0.0000000000
_pdbx_struct_oper_list.vector[1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][2] 1.0000000000
_pdbx_struct_oper_list.matrix[2][3] 0.0000000000
_pdbx_struct_oper_list.vector[2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][1] 0.0000000000
_pdbx_struct_oper_list.matrix[3][2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][3] 1.0000000000
_pdbx_struct_oper_list.vector[3] 0.0000000000
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2023-05-24
2 'Structure model' 1 1 2023-09-06
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Data collection'
2 2 'Structure model' 'Database references'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 2 'Structure model' chem_comp_atom
2 2 'Structure model' chem_comp_bond
3 2 'Structure model' citation
4 2 'Structure model' citation_author
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 2 'Structure model' '_citation.journal_volume'
2 2 'Structure model' '_citation.page_first'
3 2 'Structure model' '_citation.page_last'
4 2 'Structure model' '_citation_author.identifier_ORCID'
#
_space_group_symop.id 1
_space_group_symop.operation_xyz x,y,z
#
loop_
_software.citation_id
_software.classification
_software.compiler_name
_software.compiler_version
_software.contact_author
_software.contact_author_email
_software.date
_software.description
_software.dependencies
_software.hardware
_software.language
_software.location
_software.mods
_software.name
_software.os
_software.os_version
_software.type
_software.version
_software.pdbx_ordinal
? refinement ? ? 'Pavel Afonine' pafonine@lbl.gov ? ? ? ? Python/C++ https://www.phenix-online.org/ ? phenix.real_space_refine ? ?
program 1.19.2_4158 1
? refinement ? ? 'Paul D. Adams' pdadams@lbl.gov ? ? ? ? Python/C++ https://www.phenix-online.org/ ? PHENIX ? ?
program 1.19.2_4158 2
#
_pdbx_entry_details.entry_id 8DO1
_pdbx_entry_details.has_ligand_of_interest Y
_pdbx_entry_details.compound_details ?
_pdbx_entry_details.source_details ?
_pdbx_entry_details.nonpolymer_details ?
_pdbx_entry_details.sequence_details ?
#
_em_3d_fitting.entry_id 8DO1
_em_3d_fitting.id 1
_em_3d_fitting.details ?
_em_3d_fitting.overall_b_value ?
_em_3d_fitting.ref_protocol 'FLEXIBLE FIT'
_em_3d_fitting.ref_space REAL
_em_3d_fitting.target_criteria ?
_em_3d_fitting.method ?
#
_em_3d_reconstruction.entry_id 8DO1
_em_3d_reconstruction.id 1
_em_3d_reconstruction.algorithm 'FOURIER SPACE'
_em_3d_reconstruction.details ?
_em_3d_reconstruction.refinement_type ?
_em_3d_reconstruction.image_processing_id 1
_em_3d_reconstruction.num_class_averages ?
_em_3d_reconstruction.num_particles 324612
_em_3d_reconstruction.resolution 3.01
_em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF'
_em_3d_reconstruction.symmetry_type POINT
_em_3d_reconstruction.method ?
_em_3d_reconstruction.nominal_pixel_size ?
_em_3d_reconstruction.actual_pixel_size ?
_em_3d_reconstruction.magnification_calibration ?
#
_em_buffer.id 1
_em_buffer.details ?
_em_buffer.pH 7.5
_em_buffer.specimen_id 1
_em_buffer.name ?
#
_em_entity_assembly.id 1
_em_entity_assembly.parent_id 0
_em_entity_assembly.details ?
_em_entity_assembly.name 'A human-yeast chimeric Sec complex treated with ipomoeassin F'
_em_entity_assembly.source RECOMBINANT
_em_entity_assembly.type COMPLEX
_em_entity_assembly.entity_id_list 1,2,3
_em_entity_assembly.synonym ?
_em_entity_assembly.oligomeric_details ?
#
_em_imaging.id 1
_em_imaging.entry_id 8DO1
_em_imaging.accelerating_voltage 300
_em_imaging.alignment_procedure 'COMA FREE'
_em_imaging.c2_aperture_diameter ?
_em_imaging.calibrated_defocus_max ?
_em_imaging.calibrated_defocus_min ?
_em_imaging.calibrated_magnification ?
_em_imaging.cryogen NITROGEN
_em_imaging.details ?
_em_imaging.electron_source 'FIELD EMISSION GUN'
_em_imaging.illumination_mode 'FLOOD BEAM'
_em_imaging.microscope_model 'FEI TITAN KRIOS'
_em_imaging.mode 'BRIGHT FIELD'
_em_imaging.nominal_cs 2.7
_em_imaging.nominal_defocus_max 1600
_em_imaging.nominal_defocus_min 800
_em_imaging.nominal_magnification 81000
_em_imaging.recording_temperature_maximum ?
_em_imaging.recording_temperature_minimum ?
_em_imaging.residual_tilt ?
_em_imaging.specimen_holder_model 'FEI TITAN KRIOS AUTOGRID HOLDER'
_em_imaging.specimen_id 1
_em_imaging.citation_id ?
_em_imaging.date ?
_em_imaging.temperature ?
_em_imaging.tilt_angle_min ?
_em_imaging.tilt_angle_max ?
_em_imaging.astigmatism ?
_em_imaging.detector_distance ?
_em_imaging.electron_beam_tilt_params ?
_em_imaging.specimen_holder_type ?
#
_em_vitrification.id 1
_em_vitrification.specimen_id 1
_em_vitrification.chamber_temperature 277
_em_vitrification.cryogen_name ETHANE
_em_vitrification.details 'blot for 4 seconds before plunging'
_em_vitrification.humidity 100
_em_vitrification.instrument 'FEI VITROBOT MARK IV'
_em_vitrification.entry_id 8DO1
_em_vitrification.citation_id ?
_em_vitrification.method ?
_em_vitrification.temp ?
_em_vitrification.time_resolved_state ?
#
_em_experiment.entry_id 8DO1
_em_experiment.id 1
_em_experiment.aggregation_state PARTICLE
_em_experiment.reconstruction_method 'SINGLE PARTICLE'
_em_experiment.entity_assembly_id 1
#
_em_single_particle_entity.entry_id 8DO1
_em_single_particle_entity.id 1
_em_single_particle_entity.image_processing_id 1
_em_single_particle_entity.point_symmetry C1
#
_pdbx_validate_close_contact.id 1
_pdbx_validate_close_contact.PDB_model_num 1
_pdbx_validate_close_contact.auth_atom_id_1 OE1
_pdbx_validate_close_contact.auth_asym_id_1 A
_pdbx_validate_close_contact.auth_comp_id_1 GLU
_pdbx_validate_close_contact.auth_seq_id_1 78
_pdbx_validate_close_contact.PDB_ins_code_1 ?
_pdbx_validate_close_contact.label_alt_id_1 ?
_pdbx_validate_close_contact.auth_atom_id_2 OH
_pdbx_validate_close_contact.auth_asym_id_2 A
_pdbx_validate_close_contact.auth_comp_id_2 TYR
_pdbx_validate_close_contact.auth_seq_id_2 137
_pdbx_validate_close_contact.PDB_ins_code_2 ?
_pdbx_validate_close_contact.label_alt_id_2 ?
_pdbx_validate_close_contact.dist 2.08
#
loop_
_pdbx_validate_torsion.id
_pdbx_validate_torsion.PDB_model_num
_pdbx_validate_torsion.auth_comp_id
_pdbx_validate_torsion.auth_asym_id
_pdbx_validate_torsion.auth_seq_id
_pdbx_validate_torsion.PDB_ins_code
_pdbx_validate_torsion.label_alt_id
_pdbx_validate_torsion.phi
_pdbx_validate_torsion.psi
1 1 MET A 77 ? ? -91.84 52.48
2 1 THR A 134 ? ? -97.14 33.07
3 1 TYR A 137 ? ? 69.33 -0.98
4 1 TYR A 235 ? ? -109.06 42.27
5 1 ASN A 288 ? ? -140.78 14.81
6 1 PHE A 312 ? ? -108.99 41.89
7 1 SER A 408 ? ? -92.20 55.81
8 1 ILE A 416 ? ? -124.61 -55.98
9 1 SER A 443 ? ? 68.92 168.01
#
loop_
_pdbx_unobs_or_zero_occ_atoms.id
_pdbx_unobs_or_zero_occ_atoms.PDB_model_num
_pdbx_unobs_or_zero_occ_atoms.polymer_flag
_pdbx_unobs_or_zero_occ_atoms.occupancy_flag
_pdbx_unobs_or_zero_occ_atoms.auth_asym_id
_pdbx_unobs_or_zero_occ_atoms.auth_comp_id
_pdbx_unobs_or_zero_occ_atoms.auth_seq_id
_pdbx_unobs_or_zero_occ_atoms.PDB_ins_code
_pdbx_unobs_or_zero_occ_atoms.auth_atom_id
_pdbx_unobs_or_zero_occ_atoms.label_alt_id
_pdbx_unobs_or_zero_occ_atoms.label_asym_id
_pdbx_unobs_or_zero_occ_atoms.label_comp_id
_pdbx_unobs_or_zero_occ_atoms.label_seq_id
_pdbx_unobs_or_zero_occ_atoms.label_atom_id
1 1 Y 1 A ILE 3 ? CG1 ? A ILE 3 CG1
2 1 Y 1 A ILE 3 ? CG2 ? A ILE 3 CG2
3 1 Y 1 A ILE 3 ? CD1 ? A ILE 3 CD1
4 1 Y 1 A PHE 12 ? CG ? A PHE 12 CG
5 1 Y 1 A PHE 12 ? CD1 ? A PHE 12 CD1
6 1 Y 1 A PHE 12 ? CD2 ? A PHE 12 CD2
7 1 Y 1 A PHE 12 ? CE1 ? A PHE 12 CE1
8 1 Y 1 A PHE 12 ? CE2 ? A PHE 12 CE2
9 1 Y 1 A PHE 12 ? CZ ? A PHE 12 CZ
10 1 Y 1 B GLN 6 ? CG ? B GLN 6 CG
11 1 Y 1 B GLN 6 ? CD ? B GLN 6 CD
12 1 Y 1 B GLN 6 ? OE1 ? B GLN 6 OE1
13 1 Y 1 B GLN 6 ? NE2 ? B GLN 6 NE2
14 1 Y 1 B GLU 9 ? CG ? B GLU 9 CG
15 1 Y 1 B GLU 9 ? CD ? B GLU 9 CD
16 1 Y 1 B GLU 9 ? OE1 ? B GLU 9 OE1
17 1 Y 1 B GLU 9 ? OE2 ? B GLU 9 OE2
18 1 Y 1 B ARG 12 ? CG ? B ARG 12 CG
19 1 Y 1 B ARG 12 ? CD ? B ARG 12 CD
20 1 Y 1 B ARG 12 ? NE ? B ARG 12 NE
21 1 Y 1 B ARG 12 ? CZ ? B ARG 12 CZ
22 1 Y 1 B ARG 12 ? NH1 ? B ARG 12 NH1
23 1 Y 1 B ARG 12 ? NH2 ? B ARG 12 NH2
#
loop_
_pdbx_unobs_or_zero_occ_residues.id
_pdbx_unobs_or_zero_occ_residues.PDB_model_num
_pdbx_unobs_or_zero_occ_residues.polymer_flag
_pdbx_unobs_or_zero_occ_residues.occupancy_flag
_pdbx_unobs_or_zero_occ_residues.auth_asym_id
_pdbx_unobs_or_zero_occ_residues.auth_comp_id
_pdbx_unobs_or_zero_occ_residues.auth_seq_id
_pdbx_unobs_or_zero_occ_residues.PDB_ins_code
_pdbx_unobs_or_zero_occ_residues.label_asym_id
_pdbx_unobs_or_zero_occ_residues.label_comp_id
_pdbx_unobs_or_zero_occ_residues.label_seq_id
1 1 Y 1 A MET 1 ? A MET 1
2 1 Y 1 A ALA 2 ? A ALA 2
3 1 Y 1 A ASP 326 ? A ASP 326
4 1 Y 1 A THR 327 ? A THR 327
5 1 Y 1 A SER 328 ? A SER 328
6 1 Y 1 A SER 329 ? A SER 329
7 1 Y 1 A GLY 330 ? A GLY 330
8 1 Y 1 A GLY 331 ? A GLY 331
9 1 Y 1 A PRO 332 ? A PRO 332
10 1 Y 1 A ALA 333 ? A ALA 333
11 1 Y 1 A GLY 469 ? A GLY 469
12 1 Y 1 A SER 470 ? A SER 470
13 1 Y 1 A MET 471 ? A MET 471
14 1 Y 1 A GLY 472 ? A GLY 472
15 1 Y 1 A ALA 473 ? A ALA 473
16 1 Y 1 A LEU 474 ? A LEU 474
17 1 Y 1 A LEU 475 ? A LEU 475
18 1 Y 1 A PHE 476 ? A PHE 476
19 1 Y 1 B MET 1 ? B MET 1
20 1 Y 1 B ASP 2 ? B ASP 2
21 1 Y 1 B GLN 3 ? B GLN 3
22 1 Y 1 B VAL 4 ? B VAL 4
23 1 Y 1 B MET 5 ? B MET 5
24 1 Y 1 B GLY 67 ? B GLY 67
25 1 Y 1 B GLY 68 ? B GLY 68
26 1 Y 1 C MET 1 ? C MET 1
27 1 Y 1 C PRO 2 ? C PRO 2
28 1 Y 1 C GLY 3 ? C GLY 3
29 1 Y 1 C PRO 4 ? C PRO 4
30 1 Y 1 C THR 5 ? C THR 5
31 1 Y 1 C PRO 6 ? C PRO 6
32 1 Y 1 C SER 7 ? C SER 7
33 1 Y 1 C GLY 8 ? C GLY 8
34 1 Y 1 C THR 9 ? C THR 9
35 1 Y 1 C ASN 10 ? C ASN 10
36 1 Y 1 C VAL 11 ? C VAL 11
37 1 Y 1 C GLY 12 ? C GLY 12
38 1 Y 1 C SER 13 ? C SER 13
39 1 Y 1 C SER 14 ? C SER 14
40 1 Y 1 C GLY 15 ? C GLY 15
41 1 Y 1 C ARG 16 ? C ARG 16
42 1 Y 1 C SER 17 ? C SER 17
43 1 Y 1 C PRO 18 ? C PRO 18
44 1 Y 1 C SER 19 ? C SER 19
45 1 Y 1 C LYS 20 ? C LYS 20
46 1 Y 1 C ALA 21 ? C ALA 21
47 1 Y 1 C VAL 22 ? C VAL 22
48 1 Y 1 C ALA 23 ? C ALA 23
49 1 Y 1 C ALA 24 ? C ALA 24
50 1 Y 1 C ARG 25 ? C ARG 25
51 1 Y 1 C ALA 26 ? C ALA 26
52 1 Y 1 C ALA 27 ? C ALA 27
53 1 Y 1 C GLY 28 ? C GLY 28
54 1 Y 1 C SER 29 ? C SER 29
55 1 Y 1 C THR 30 ? C THR 30
56 1 Y 1 C VAL 31 ? C VAL 31
57 1 Y 1 C ARG 32 ? C ARG 32
58 1 Y 1 C GLN 33 ? C GLN 33
59 1 Y 1 C ARG 34 ? C ARG 34
60 1 Y 1 C LYS 35 ? C LYS 35
61 1 Y 1 C ASN 36 ? C ASN 36
62 1 Y 1 C ALA 37 ? C ALA 37
63 1 Y 1 C SER 38 ? C SER 38
64 1 Y 1 C CYS 39 ? C CYS 39
65 1 Y 1 C GLY 40 ? C GLY 40
66 1 Y 1 C THR 41 ? C THR 41
67 1 Y 1 C ARG 42 ? C ARG 42
68 1 Y 1 C SER 43 ? C SER 43
69 1 Y 1 C ALA 44 ? C ALA 44
70 1 Y 1 C GLY 45 ? C GLY 45
71 1 Y 1 C ARG 46 ? C ARG 46
72 1 Y 1 C THR 47 ? C THR 47
73 1 Y 1 C THR 48 ? C THR 48
74 1 Y 1 C SER 49 ? C SER 49
75 1 Y 1 C ALA 50 ? C ALA 50
76 1 Y 1 C GLY 51 ? C GLY 51
77 1 Y 1 C THR 52 ? C THR 52
78 1 Y 1 C GLY 53 ? C GLY 53
79 1 Y 1 C GLY 54 ? C GLY 54
80 1 Y 1 C MET 55 ? C MET 55
81 1 Y 1 C TRP 56 ? C TRP 56
82 1 Y 1 C ARG 57 ? C ARG 57
83 1 Y 1 C PHE 58 ? C PHE 58
84 1 Y 1 C TYR 59 ? C TYR 59
85 1 Y 1 C THR 60 ? C THR 60
86 1 Y 1 C GLU 61 ? C GLU 61
87 1 Y 1 C ASP 62 ? C ASP 62
88 1 Y 1 C SER 63 ? C SER 63
89 1 Y 1 C PRO 64 ? C PRO 64
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
ALA N N N N 1
ALA CA C N S 2
ALA C C N N 3
ALA O O N N 4
ALA CB C N N 5
ALA OXT O N N 6
ALA H H N N 7
ALA H2 H N N 8
ALA HA H N N 9
ALA HB1 H N N 10
ALA HB2 H N N 11
ALA HB3 H N N 12
ALA HXT H N N 13
ARG N N N N 14
ARG CA C N S 15
ARG C C N N 16
ARG O O N N 17
ARG CB C N N 18
ARG CG C N N 19
ARG CD C N N 20
ARG NE N N N 21
ARG CZ C N N 22
ARG NH1 N N N 23
ARG NH2 N N N 24
ARG OXT O N N 25
ARG H H N N 26
ARG H2 H N N 27
ARG HA H N N 28
ARG HB2 H N N 29
ARG HB3 H N N 30
ARG HG2 H N N 31
ARG HG3 H N N 32
ARG HD2 H N N 33
ARG HD3 H N N 34
ARG HE H N N 35
ARG HH11 H N N 36
ARG HH12 H N N 37
ARG HH21 H N N 38
ARG HH22 H N N 39
ARG HXT H N N 40
ASN N N N N 41
ASN CA C N S 42
ASN C C N N 43
ASN O O N N 44
ASN CB C N N 45
ASN CG C N N 46
ASN OD1 O N N 47
ASN ND2 N N N 48
ASN OXT O N N 49
ASN H H N N 50
ASN H2 H N N 51
ASN HA H N N 52
ASN HB2 H N N 53
ASN HB3 H N N 54
ASN HD21 H N N 55
ASN HD22 H N N 56
ASN HXT H N N 57
ASP N N N N 58
ASP CA C N S 59
ASP C C N N 60
ASP O O N N 61
ASP CB C N N 62
ASP CG C N N 63
ASP OD1 O N N 64
ASP OD2 O N N 65
ASP OXT O N N 66
ASP H H N N 67
ASP H2 H N N 68
ASP HA H N N 69
ASP HB2 H N N 70
ASP HB3 H N N 71
ASP HD2 H N N 72
ASP HXT H N N 73
CYS N N N N 74
CYS CA C N R 75
CYS C C N N 76
CYS O O N N 77
CYS CB C N N 78
CYS SG S N N 79
CYS OXT O N N 80
CYS H H N N 81
CYS H2 H N N 82
CYS HA H N N 83
CYS HB2 H N N 84
CYS HB3 H N N 85
CYS HG H N N 86
CYS HXT H N N 87
GLN N N N N 88
GLN CA C N S 89
GLN C C N N 90
GLN O O N N 91
GLN CB C N N 92
GLN CG C N N 93
GLN CD C N N 94
GLN OE1 O N N 95
GLN NE2 N N N 96
GLN OXT O N N 97
GLN H H N N 98
GLN H2 H N N 99
GLN HA H N N 100
GLN HB2 H N N 101
GLN HB3 H N N 102
GLN HG2 H N N 103
GLN HG3 H N N 104
GLN HE21 H N N 105
GLN HE22 H N N 106
GLN HXT H N N 107
GLU N N N N 108
GLU CA C N S 109
GLU C C N N 110
GLU O O N N 111
GLU CB C N N 112
GLU CG C N N 113
GLU CD C N N 114
GLU OE1 O N N 115
GLU OE2 O N N 116
GLU OXT O N N 117
GLU H H N N 118
GLU H2 H N N 119
GLU HA H N N 120
GLU HB2 H N N 121
GLU HB3 H N N 122
GLU HG2 H N N 123
GLU HG3 H N N 124
GLU HE2 H N N 125
GLU HXT H N N 126
GLY N N N N 127
GLY CA C N N 128
GLY C C N N 129
GLY O O N N 130
GLY OXT O N N 131
GLY H H N N 132
GLY H2 H N N 133
GLY HA2 H N N 134
GLY HA3 H N N 135
GLY HXT H N N 136
HIS N N N N 137
HIS CA C N S 138
HIS C C N N 139
HIS O O N N 140
HIS CB C N N 141
HIS CG C Y N 142
HIS ND1 N Y N 143
HIS CD2 C Y N 144
HIS CE1 C Y N 145
HIS NE2 N Y N 146
HIS OXT O N N 147
HIS H H N N 148
HIS H2 H N N 149
HIS HA H N N 150
HIS HB2 H N N 151
HIS HB3 H N N 152
HIS HD1 H N N 153
HIS HD2 H N N 154
HIS HE1 H N N 155
HIS HE2 H N N 156
HIS HXT H N N 157
HOH O O N N 158
HOH H1 H N N 159
HOH H2 H N N 160
ILE N N N N 161
ILE CA C N S 162
ILE C C N N 163
ILE O O N N 164
ILE CB C N S 165
ILE CG1 C N N 166
ILE CG2 C N N 167
ILE CD1 C N N 168
ILE OXT O N N 169
ILE H H N N 170
ILE H2 H N N 171
ILE HA H N N 172
ILE HB H N N 173
ILE HG12 H N N 174
ILE HG13 H N N 175
ILE HG21 H N N 176
ILE HG22 H N N 177
ILE HG23 H N N 178
ILE HD11 H N N 179
ILE HD12 H N N 180
ILE HD13 H N N 181
ILE HXT H N N 182
LEU N N N N 183
LEU CA C N S 184
LEU C C N N 185
LEU O O N N 186
LEU CB C N N 187
LEU CG C N N 188
LEU CD1 C N N 189
LEU CD2 C N N 190
LEU OXT O N N 191
LEU H H N N 192
LEU H2 H N N 193
LEU HA H N N 194
LEU HB2 H N N 195
LEU HB3 H N N 196
LEU HG H N N 197
LEU HD11 H N N 198
LEU HD12 H N N 199
LEU HD13 H N N 200
LEU HD21 H N N 201
LEU HD22 H N N 202
LEU HD23 H N N 203
LEU HXT H N N 204
LYS N N N N 205
LYS CA C N S 206
LYS C C N N 207
LYS O O N N 208
LYS CB C N N 209
LYS CG C N N 210
LYS CD C N N 211
LYS CE C N N 212
LYS NZ N N N 213
LYS OXT O N N 214
LYS H H N N 215
LYS H2 H N N 216
LYS HA H N N 217
LYS HB2 H N N 218
LYS HB3 H N N 219
LYS HG2 H N N 220
LYS HG3 H N N 221
LYS HD2 H N N 222
LYS HD3 H N N 223
LYS HE2 H N N 224
LYS HE3 H N N 225
LYS HZ1 H N N 226
LYS HZ2 H N N 227
LYS HZ3 H N N 228
LYS HXT H N N 229
MET N N N N 230
MET CA C N S 231
MET C C N N 232
MET O O N N 233
MET CB C N N 234
MET CG C N N 235
MET SD S N N 236
MET CE C N N 237
MET OXT O N N 238
MET H H N N 239
MET H2 H N N 240
MET HA H N N 241
MET HB2 H N N 242
MET HB3 H N N 243
MET HG2 H N N 244
MET HG3 H N N 245
MET HE1 H N N 246
MET HE2 H N N 247
MET HE3 H N N 248
MET HXT H N N 249
PHE N N N N 250
PHE CA C N S 251
PHE C C N N 252
PHE O O N N 253
PHE CB C N N 254
PHE CG C Y N 255
PHE CD1 C Y N 256
PHE CD2 C Y N 257
PHE CE1 C Y N 258
PHE CE2 C Y N 259
PHE CZ C Y N 260
PHE OXT O N N 261
PHE H H N N 262
PHE H2 H N N 263
PHE HA H N N 264
PHE HB2 H N N 265
PHE HB3 H N N 266
PHE HD1 H N N 267
PHE HD2 H N N 268
PHE HE1 H N N 269
PHE HE2 H N N 270
PHE HZ H N N 271
PHE HXT H N N 272
PRO N N N N 273
PRO CA C N S 274
PRO C C N N 275
PRO O O N N 276
PRO CB C N N 277
PRO CG C N N 278
PRO CD C N N 279
PRO OXT O N N 280
PRO H H N N 281
PRO HA H N N 282
PRO HB2 H N N 283
PRO HB3 H N N 284
PRO HG2 H N N 285
PRO HG3 H N N 286
PRO HD2 H N N 287
PRO HD3 H N N 288
PRO HXT H N N 289
SER N N N N 290
SER CA C N S 291
SER C C N N 292
SER O O N N 293
SER CB C N N 294
SER OG O N N 295
SER OXT O N N 296
SER H H N N 297
SER H2 H N N 298
SER HA H N N 299
SER HB2 H N N 300
SER HB3 H N N 301
SER HG H N N 302
SER HXT H N N 303
SXF C13 C N N 304
SXF C15 C Y N 305
SXF C17 C Y N 306
SXF C21 C N R 307
SXF C24 C N N 308
SXF C26 C N N 309
SXF C02 C N N 310
SXF C03 C N N 311
SXF C04 C N N 312
SXF C05 C N N 313
SXF C07 C N N 314
SXF C08 C N R 315
SXF C09 C N R 316
SXF C11 C N N 317
SXF C12 C N N 318
SXF C14 C Y N 319
SXF C16 C Y N 320
SXF C18 C Y N 321
SXF C19 C Y N 322
SXF C23 C N N 323
SXF C25 C N N 324
SXF C27 C N N 325
SXF C29 C N R 326
SXF C31 C N S 327
SXF C33 C N R 328
SXF C34 C N S 329
SXF C36 C N R 330
SXF C38 C N N 331
SXF C39 C N N 332
SXF C41 C N R 333
SXF C42 C N N 334
SXF C44 C N R 335
SXF C48 C N N 336
SXF C49 C N N 337
SXF C50 C N N 338
SXF C51 C N N 339
SXF C52 C N N 340
SXF C53 C N N 341
SXF C54 C N S 342
SXF C55 C N N 343
SXF C56 C N N 344
SXF C57 C N N 345
SXF C58 C N N 346
SXF C59 C N N 347
SXF O01 O N N 348
SXF O06 O N N 349
SXF O10 O N N 350
SXF O20 O N N 351
SXF O22 O N N 352
SXF O28 O N N 353
SXF O30 O N N 354
SXF O32 O N N 355
SXF O35 O N N 356
SXF O37 O N N 357
SXF O40 O N N 358
SXF O43 O N N 359
SXF O45 O N N 360
SXF O46 O N N 361
SXF O47 O N N 362
SXF H131 H N N 363
SXF H151 H N N 364
SXF H171 H N N 365
SXF H211 H N N 366
SXF H261 H N N 367
SXF H031 H N N 368
SXF H032 H N N 369
SXF H042 H N N 370
SXF H041 H N N 371
SXF H071 H N N 372
SXF H072 H N N 373
SXF H081 H N N 374
SXF H091 H N N 375
SXF H121 H N N 376
SXF H161 H N N 377
SXF H181 H N N 378
SXF H191 H N N 379
SXF H252 H N N 380
SXF H251 H N N 381
SXF H253 H N N 382
SXF H271 H N N 383
SXF H273 H N N 384
SXF H272 H N N 385
SXF H291 H N N 386
SXF H311 H N N 387
SXF H331 H N N 388
SXF H341 H N N 389
SXF H361 H N N 390
SXF H393 H N N 391
SXF H392 H N N 392
SXF H391 H N N 393
SXF H411 H N N 394
SXF H422 H N N 395
SXF H421 H N N 396
SXF H423 H N N 397
SXF H441 H N N 398
SXF H481 H N N 399
SXF H482 H N N 400
SXF H492 H N N 401
SXF H491 H N N 402
SXF H501 H N N 403
SXF H502 H N N 404
SXF H512 H N N 405
SXF H511 H N N 406
SXF H522 H N N 407
SXF H521 H N N 408
SXF H531 H N N 409
SXF H532 H N N 410
SXF H541 H N N 411
SXF H552 H N N 412
SXF H551 H N N 413
SXF H562 H N N 414
SXF H561 H N N 415
SXF H572 H N N 416
SXF H571 H N N 417
SXF H582 H N N 418
SXF H581 H N N 419
SXF H591 H N N 420
SXF H592 H N N 421
SXF H593 H N N 422
SXF H301 H N N 423
SXF H351 H N N 424
THR N N N N 425
THR CA C N S 426
THR C C N N 427
THR O O N N 428
THR CB C N R 429
THR OG1 O N N 430
THR CG2 C N N 431
THR OXT O N N 432
THR H H N N 433
THR H2 H N N 434
THR HA H N N 435
THR HB H N N 436
THR HG1 H N N 437
THR HG21 H N N 438
THR HG22 H N N 439
THR HG23 H N N 440
THR HXT H N N 441
TRP N N N N 442
TRP CA C N S 443
TRP C C N N 444
TRP O O N N 445
TRP CB C N N 446
TRP CG C Y N 447
TRP CD1 C Y N 448
TRP CD2 C Y N 449
TRP NE1 N Y N 450
TRP CE2 C Y N 451
TRP CE3 C Y N 452
TRP CZ2 C Y N 453
TRP CZ3 C Y N 454
TRP CH2 C Y N 455
TRP OXT O N N 456
TRP H H N N 457
TRP H2 H N N 458
TRP HA H N N 459
TRP HB2 H N N 460
TRP HB3 H N N 461
TRP HD1 H N N 462
TRP HE1 H N N 463
TRP HE3 H N N 464
TRP HZ2 H N N 465
TRP HZ3 H N N 466
TRP HH2 H N N 467
TRP HXT H N N 468
TYR N N N N 469
TYR CA C N S 470
TYR C C N N 471
TYR O O N N 472
TYR CB C N N 473
TYR CG C Y N 474
TYR CD1 C Y N 475
TYR CD2 C Y N 476
TYR CE1 C Y N 477
TYR CE2 C Y N 478
TYR CZ C Y N 479
TYR OH O N N 480
TYR OXT O N N 481
TYR H H N N 482
TYR H2 H N N 483
TYR HA H N N 484
TYR HB2 H N N 485
TYR HB3 H N N 486
TYR HD1 H N N 487
TYR HD2 H N N 488
TYR HE1 H N N 489
TYR HE2 H N N 490
TYR HH H N N 491
TYR HXT H N N 492
VAL N N N N 493
VAL CA C N S 494
VAL C C N N 495
VAL O O N N 496
VAL CB C N N 497
VAL CG1 C N N 498
VAL CG2 C N N 499
VAL OXT O N N 500
VAL H H N N 501
VAL H2 H N N 502
VAL HA H N N 503
VAL HB H N N 504
VAL HG11 H N N 505
VAL HG12 H N N 506
VAL HG13 H N N 507
VAL HG21 H N N 508
VAL HG22 H N N 509
VAL HG23 H N N 510
VAL HXT H N N 511
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ALA N CA sing N N 1
ALA N H sing N N 2
ALA N H2 sing N N 3
ALA CA C sing N N 4
ALA CA CB sing N N 5
ALA CA HA sing N N 6
ALA C O doub N N 7
ALA C OXT sing N N 8
ALA CB HB1 sing N N 9
ALA CB HB2 sing N N 10
ALA CB HB3 sing N N 11
ALA OXT HXT sing N N 12
ARG N CA sing N N 13
ARG N H sing N N 14
ARG N H2 sing N N 15
ARG CA C sing N N 16
ARG CA CB sing N N 17
ARG CA HA sing N N 18
ARG C O doub N N 19
ARG C OXT sing N N 20
ARG CB CG sing N N 21
ARG CB HB2 sing N N 22
ARG CB HB3 sing N N 23
ARG CG CD sing N N 24
ARG CG HG2 sing N N 25
ARG CG HG3 sing N N 26
ARG CD NE sing N N 27
ARG CD HD2 sing N N 28
ARG CD HD3 sing N N 29
ARG NE CZ sing N N 30
ARG NE HE sing N N 31
ARG CZ NH1 sing N N 32
ARG CZ NH2 doub N N 33
ARG NH1 HH11 sing N N 34
ARG NH1 HH12 sing N N 35
ARG NH2 HH21 sing N N 36
ARG NH2 HH22 sing N N 37
ARG OXT HXT sing N N 38
ASN N CA sing N N 39
ASN N H sing N N 40
ASN N H2 sing N N 41
ASN CA C sing N N 42
ASN CA CB sing N N 43
ASN CA HA sing N N 44
ASN C O doub N N 45
ASN C OXT sing N N 46
ASN CB CG sing N N 47
ASN CB HB2 sing N N 48
ASN CB HB3 sing N N 49
ASN CG OD1 doub N N 50
ASN CG ND2 sing N N 51
ASN ND2 HD21 sing N N 52
ASN ND2 HD22 sing N N 53
ASN OXT HXT sing N N 54
ASP N CA sing N N 55
ASP N H sing N N 56
ASP N H2 sing N N 57
ASP CA C sing N N 58
ASP CA CB sing N N 59
ASP CA HA sing N N 60
ASP C O doub N N 61
ASP C OXT sing N N 62
ASP CB CG sing N N 63
ASP CB HB2 sing N N 64
ASP CB HB3 sing N N 65
ASP CG OD1 doub N N 66
ASP CG OD2 sing N N 67
ASP OD2 HD2 sing N N 68
ASP OXT HXT sing N N 69
CYS N CA sing N N 70
CYS N H sing N N 71
CYS N H2 sing N N 72
CYS CA C sing N N 73
CYS CA CB sing N N 74
CYS CA HA sing N N 75
CYS C O doub N N 76
CYS C OXT sing N N 77
CYS CB SG sing N N 78
CYS CB HB2 sing N N 79
CYS CB HB3 sing N N 80
CYS SG HG sing N N 81
CYS OXT HXT sing N N 82
GLN N CA sing N N 83
GLN N H sing N N 84
GLN N H2 sing N N 85
GLN CA C sing N N 86
GLN CA CB sing N N 87
GLN CA HA sing N N 88
GLN C O doub N N 89
GLN C OXT sing N N 90
GLN CB CG sing N N 91
GLN CB HB2 sing N N 92
GLN CB HB3 sing N N 93
GLN CG CD sing N N 94
GLN CG HG2 sing N N 95
GLN CG HG3 sing N N 96
GLN CD OE1 doub N N 97
GLN CD NE2 sing N N 98
GLN NE2 HE21 sing N N 99
GLN NE2 HE22 sing N N 100
GLN OXT HXT sing N N 101
GLU N CA sing N N 102
GLU N H sing N N 103
GLU N H2 sing N N 104
GLU CA C sing N N 105
GLU CA CB sing N N 106
GLU CA HA sing N N 107
GLU C O doub N N 108
GLU C OXT sing N N 109
GLU CB CG sing N N 110
GLU CB HB2 sing N N 111
GLU CB HB3 sing N N 112
GLU CG CD sing N N 113
GLU CG HG2 sing N N 114
GLU CG HG3 sing N N 115
GLU CD OE1 doub N N 116
GLU CD OE2 sing N N 117
GLU OE2 HE2 sing N N 118
GLU OXT HXT sing N N 119
GLY N CA sing N N 120
GLY N H sing N N 121
GLY N H2 sing N N 122
GLY CA C sing N N 123
GLY CA HA2 sing N N 124
GLY CA HA3 sing N N 125
GLY C O doub N N 126
GLY C OXT sing N N 127
GLY OXT HXT sing N N 128
HIS N CA sing N N 129
HIS N H sing N N 130
HIS N H2 sing N N 131
HIS CA C sing N N 132
HIS CA CB sing N N 133
HIS CA HA sing N N 134
HIS C O doub N N 135
HIS C OXT sing N N 136
HIS CB CG sing N N 137
HIS CB HB2 sing N N 138
HIS CB HB3 sing N N 139
HIS CG ND1 sing Y N 140
HIS CG CD2 doub Y N 141
HIS ND1 CE1 doub Y N 142
HIS ND1 HD1 sing N N 143
HIS CD2 NE2 sing Y N 144
HIS CD2 HD2 sing N N 145
HIS CE1 NE2 sing Y N 146
HIS CE1 HE1 sing N N 147
HIS NE2 HE2 sing N N 148
HIS OXT HXT sing N N 149
HOH O H1 sing N N 150
HOH O H2 sing N N 151
ILE N CA sing N N 152
ILE N H sing N N 153
ILE N H2 sing N N 154
ILE CA C sing N N 155
ILE CA CB sing N N 156
ILE CA HA sing N N 157
ILE C O doub N N 158
ILE C OXT sing N N 159
ILE CB CG1 sing N N 160
ILE CB CG2 sing N N 161
ILE CB HB sing N N 162
ILE CG1 CD1 sing N N 163
ILE CG1 HG12 sing N N 164
ILE CG1 HG13 sing N N 165
ILE CG2 HG21 sing N N 166
ILE CG2 HG22 sing N N 167
ILE CG2 HG23 sing N N 168
ILE CD1 HD11 sing N N 169
ILE CD1 HD12 sing N N 170
ILE CD1 HD13 sing N N 171
ILE OXT HXT sing N N 172
LEU N CA sing N N 173
LEU N H sing N N 174
LEU N H2 sing N N 175
LEU CA C sing N N 176
LEU CA CB sing N N 177
LEU CA HA sing N N 178
LEU C O doub N N 179
LEU C OXT sing N N 180
LEU CB CG sing N N 181
LEU CB HB2 sing N N 182
LEU CB HB3 sing N N 183
LEU CG CD1 sing N N 184
LEU CG CD2 sing N N 185
LEU CG HG sing N N 186
LEU CD1 HD11 sing N N 187
LEU CD1 HD12 sing N N 188
LEU CD1 HD13 sing N N 189
LEU CD2 HD21 sing N N 190
LEU CD2 HD22 sing N N 191
LEU CD2 HD23 sing N N 192
LEU OXT HXT sing N N 193
LYS N CA sing N N 194
LYS N H sing N N 195
LYS N H2 sing N N 196
LYS CA C sing N N 197
LYS CA CB sing N N 198
LYS CA HA sing N N 199
LYS C O doub N N 200
LYS C OXT sing N N 201
LYS CB CG sing N N 202
LYS CB HB2 sing N N 203
LYS CB HB3 sing N N 204
LYS CG CD sing N N 205
LYS CG HG2 sing N N 206
LYS CG HG3 sing N N 207
LYS CD CE sing N N 208
LYS CD HD2 sing N N 209
LYS CD HD3 sing N N 210
LYS CE NZ sing N N 211
LYS CE HE2 sing N N 212
LYS CE HE3 sing N N 213
LYS NZ HZ1 sing N N 214
LYS NZ HZ2 sing N N 215
LYS NZ HZ3 sing N N 216
LYS OXT HXT sing N N 217
MET N CA sing N N 218
MET N H sing N N 219
MET N H2 sing N N 220
MET CA C sing N N 221
MET CA CB sing N N 222
MET CA HA sing N N 223
MET C O doub N N 224
MET C OXT sing N N 225
MET CB CG sing N N 226
MET CB HB2 sing N N 227
MET CB HB3 sing N N 228
MET CG SD sing N N 229
MET CG HG2 sing N N 230
MET CG HG3 sing N N 231
MET SD CE sing N N 232
MET CE HE1 sing N N 233
MET CE HE2 sing N N 234
MET CE HE3 sing N N 235
MET OXT HXT sing N N 236
PHE N CA sing N N 237
PHE N H sing N N 238
PHE N H2 sing N N 239
PHE CA C sing N N 240
PHE CA CB sing N N 241
PHE CA HA sing N N 242
PHE C O doub N N 243
PHE C OXT sing N N 244
PHE CB CG sing N N 245
PHE CB HB2 sing N N 246
PHE CB HB3 sing N N 247
PHE CG CD1 doub Y N 248
PHE CG CD2 sing Y N 249
PHE CD1 CE1 sing Y N 250
PHE CD1 HD1 sing N N 251
PHE CD2 CE2 doub Y N 252
PHE CD2 HD2 sing N N 253
PHE CE1 CZ doub Y N 254
PHE CE1 HE1 sing N N 255
PHE CE2 CZ sing Y N 256
PHE CE2 HE2 sing N N 257
PHE CZ HZ sing N N 258
PHE OXT HXT sing N N 259
PRO N CA sing N N 260
PRO N CD sing N N 261
PRO N H sing N N 262
PRO CA C sing N N 263
PRO CA CB sing N N 264
PRO CA HA sing N N 265
PRO C O doub N N 266
PRO C OXT sing N N 267
PRO CB CG sing N N 268
PRO CB HB2 sing N N 269
PRO CB HB3 sing N N 270
PRO CG CD sing N N 271
PRO CG HG2 sing N N 272
PRO CG HG3 sing N N 273
PRO CD HD2 sing N N 274
PRO CD HD3 sing N N 275
PRO OXT HXT sing N N 276
SER N CA sing N N 277
SER N H sing N N 278
SER N H2 sing N N 279
SER CA C sing N N 280
SER CA CB sing N N 281
SER CA HA sing N N 282
SER C O doub N N 283
SER C OXT sing N N 284
SER CB OG sing N N 285
SER CB HB2 sing N N 286
SER CB HB3 sing N N 287
SER OG HG sing N N 288
SER OXT HXT sing N N 289
SXF C17 C18 doub Y N 290
SXF C17 C16 sing Y N 291
SXF C18 C19 sing Y N 292
SXF C16 C15 doub Y N 293
SXF C19 C14 doub Y N 294
SXF C15 C14 sing Y N 295
SXF C14 C13 sing N N 296
SXF C13 C12 doub N E 297
SXF C27 C26 sing N N 298
SXF C12 C11 sing N N 299
SXF C26 C24 doub N E 300
SXF O28 C23 doub N N 301
SXF C24 C23 sing N N 302
SXF C24 C25 sing N N 303
SXF C11 O10 sing N N 304
SXF C11 O20 doub N N 305
SXF O10 C09 sing N N 306
SXF C23 O22 sing N N 307
SXF C09 C21 sing N N 308
SXF C09 C08 sing N N 309
SXF O22 C21 sing N N 310
SXF C21 C29 sing N N 311
SXF C07 C08 sing N N 312
SXF C07 O06 sing N N 313
SXF C08 O46 sing N N 314
SXF O47 C05 doub N N 315
SXF O30 C29 sing N N 316
SXF C29 C31 sing N N 317
SXF O06 C05 sing N N 318
SXF C05 C04 sing N N 319
SXF O46 C31 sing N N 320
SXF C31 O32 sing N N 321
SXF C55 C56 sing N N 322
SXF C55 C54 sing N N 323
SXF O40 C38 doub N N 324
SXF C56 C57 sing N N 325
SXF C04 C03 sing N N 326
SXF C57 C58 sing N N 327
SXF O45 C54 sing N N 328
SXF O45 C44 sing N N 329
SXF C38 O37 sing N N 330
SXF C38 C39 sing N N 331
SXF O32 C33 sing N N 332
SXF O37 C36 sing N N 333
SXF C54 C53 sing N N 334
SXF C33 C44 sing N N 335
SXF C33 C34 sing N N 336
SXF C53 C52 sing N N 337
SXF C03 C02 sing N N 338
SXF O35 C34 sing N N 339
SXF C44 O43 sing N N 340
SXF C59 C58 sing N N 341
SXF O43 C41 sing N N 342
SXF C34 C36 sing N N 343
SXF C51 C52 sing N N 344
SXF C51 C50 sing N N 345
SXF C36 C41 sing N N 346
SXF C48 C02 sing N N 347
SXF C48 C49 sing N N 348
SXF C02 O01 doub N N 349
SXF C50 C49 sing N N 350
SXF C41 C42 sing N N 351
SXF C13 H131 sing N N 352
SXF C15 H151 sing N N 353
SXF C17 H171 sing N N 354
SXF C21 H211 sing N N 355
SXF C26 H261 sing N N 356
SXF C03 H031 sing N N 357
SXF C03 H032 sing N N 358
SXF C04 H042 sing N N 359
SXF C04 H041 sing N N 360
SXF C07 H071 sing N N 361
SXF C07 H072 sing N N 362
SXF C08 H081 sing N N 363
SXF C09 H091 sing N N 364
SXF C12 H121 sing N N 365
SXF C16 H161 sing N N 366
SXF C18 H181 sing N N 367
SXF C19 H191 sing N N 368
SXF C25 H252 sing N N 369
SXF C25 H251 sing N N 370
SXF C25 H253 sing N N 371
SXF C27 H271 sing N N 372
SXF C27 H273 sing N N 373
SXF C27 H272 sing N N 374
SXF C29 H291 sing N N 375
SXF C31 H311 sing N N 376
SXF C33 H331 sing N N 377
SXF C34 H341 sing N N 378
SXF C36 H361 sing N N 379
SXF C39 H393 sing N N 380
SXF C39 H392 sing N N 381
SXF C39 H391 sing N N 382
SXF C41 H411 sing N N 383
SXF C42 H422 sing N N 384
SXF C42 H421 sing N N 385
SXF C42 H423 sing N N 386
SXF C44 H441 sing N N 387
SXF C48 H481 sing N N 388
SXF C48 H482 sing N N 389
SXF C49 H492 sing N N 390
SXF C49 H491 sing N N 391
SXF C50 H501 sing N N 392
SXF C50 H502 sing N N 393
SXF C51 H512 sing N N 394
SXF C51 H511 sing N N 395
SXF C52 H522 sing N N 396
SXF C52 H521 sing N N 397
SXF C53 H531 sing N N 398
SXF C53 H532 sing N N 399
SXF C54 H541 sing N N 400
SXF C55 H552 sing N N 401
SXF C55 H551 sing N N 402
SXF C56 H562 sing N N 403
SXF C56 H561 sing N N 404
SXF C57 H572 sing N N 405
SXF C57 H571 sing N N 406
SXF C58 H582 sing N N 407
SXF C58 H581 sing N N 408
SXF C59 H591 sing N N 409
SXF C59 H592 sing N N 410
SXF C59 H593 sing N N 411
SXF O30 H301 sing N N 412
SXF O35 H351 sing N N 413
THR N CA sing N N 414
THR N H sing N N 415
THR N H2 sing N N 416
THR CA C sing N N 417
THR CA CB sing N N 418
THR CA HA sing N N 419
THR C O doub N N 420
THR C OXT sing N N 421
THR CB OG1 sing N N 422
THR CB CG2 sing N N 423
THR CB HB sing N N 424
THR OG1 HG1 sing N N 425
THR CG2 HG21 sing N N 426
THR CG2 HG22 sing N N 427
THR CG2 HG23 sing N N 428
THR OXT HXT sing N N 429
TRP N CA sing N N 430
TRP N H sing N N 431
TRP N H2 sing N N 432
TRP CA C sing N N 433
TRP CA CB sing N N 434
TRP CA HA sing N N 435
TRP C O doub N N 436
TRP C OXT sing N N 437
TRP CB CG sing N N 438
TRP CB HB2 sing N N 439
TRP CB HB3 sing N N 440
TRP CG CD1 doub Y N 441
TRP CG CD2 sing Y N 442
TRP CD1 NE1 sing Y N 443
TRP CD1 HD1 sing N N 444
TRP CD2 CE2 doub Y N 445
TRP CD2 CE3 sing Y N 446
TRP NE1 CE2 sing Y N 447
TRP NE1 HE1 sing N N 448
TRP CE2 CZ2 sing Y N 449
TRP CE3 CZ3 doub Y N 450
TRP CE3 HE3 sing N N 451
TRP CZ2 CH2 doub Y N 452
TRP CZ2 HZ2 sing N N 453
TRP CZ3 CH2 sing Y N 454
TRP CZ3 HZ3 sing N N 455
TRP CH2 HH2 sing N N 456
TRP OXT HXT sing N N 457
TYR N CA sing N N 458
TYR N H sing N N 459
TYR N H2 sing N N 460
TYR CA C sing N N 461
TYR CA CB sing N N 462
TYR CA HA sing N N 463
TYR C O doub N N 464
TYR C OXT sing N N 465
TYR CB CG sing N N 466
TYR CB HB2 sing N N 467
TYR CB HB3 sing N N 468
TYR CG CD1 doub Y N 469
TYR CG CD2 sing Y N 470
TYR CD1 CE1 sing Y N 471
TYR CD1 HD1 sing N N 472
TYR CD2 CE2 doub Y N 473
TYR CD2 HD2 sing N N 474
TYR CE1 CZ doub Y N 475
TYR CE1 HE1 sing N N 476
TYR CE2 CZ sing Y N 477
TYR CE2 HE2 sing N N 478
TYR CZ OH sing N N 479
TYR OH HH sing N N 480
TYR OXT HXT sing N N 481
VAL N CA sing N N 482
VAL N H sing N N 483
VAL N H2 sing N N 484
VAL CA C sing N N 485
VAL CA CB sing N N 486
VAL CA HA sing N N 487
VAL C O doub N N 488
VAL C OXT sing N N 489
VAL CB CG1 sing N N 490
VAL CB CG2 sing N N 491
VAL CB HB sing N N 492
VAL CG1 HG11 sing N N 493
VAL CG1 HG12 sing N N 494
VAL CG1 HG13 sing N N 495
VAL CG2 HG21 sing N N 496
VAL CG2 HG22 sing N N 497
VAL CG2 HG23 sing N N 498
VAL OXT HXT sing N N 499
#
loop_
_em_buffer_component.buffer_id
_em_buffer_component.id
_em_buffer_component.concentration
_em_buffer_component.concentration_units
_em_buffer_component.formula
_em_buffer_component.name
1 1 25 mM '(HOCH2)3CNH2' Tris
1 2 100 mM NaCl 'sodium chloride'
1 3 2 mM C4H10O2S2 dithiothreitol
1 4 1 mM C10H16N2O8 EDTA
1 5 3 mM C13H17F13NO4P 'Fluorinated Fos-choline-8'
#
_em_ctf_correction.id 1
_em_ctf_correction.em_image_processing_id 1
_em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION'
_em_ctf_correction.details ?
#
_em_entity_assembly_molwt.entity_assembly_id 1
_em_entity_assembly_molwt.id 1
_em_entity_assembly_molwt.experimental_flag NO
_em_entity_assembly_molwt.units ?
_em_entity_assembly_molwt.value ?
#
_em_entity_assembly_naturalsource.id 1
_em_entity_assembly_naturalsource.entity_assembly_id 1
_em_entity_assembly_naturalsource.cell ?
_em_entity_assembly_naturalsource.cellular_location ?
_em_entity_assembly_naturalsource.ncbi_tax_id 9606
_em_entity_assembly_naturalsource.organ ?
_em_entity_assembly_naturalsource.organelle 'endoplasmic reticulum'
_em_entity_assembly_naturalsource.organism 'Homo sapiens'
_em_entity_assembly_naturalsource.strain ?
_em_entity_assembly_naturalsource.tissue ?
#
_em_entity_assembly_recombinant.id 1
_em_entity_assembly_recombinant.entity_assembly_id 1
_em_entity_assembly_recombinant.cell ?
_em_entity_assembly_recombinant.ncbi_tax_id 7108
_em_entity_assembly_recombinant.organism 'Spodoptera frugiperda'
_em_entity_assembly_recombinant.plasmid pFastBac
_em_entity_assembly_recombinant.strain Sf9
#
_em_image_processing.id 1
_em_image_processing.image_recording_id 1
_em_image_processing.details ?
#
_em_image_recording.id 1
_em_image_recording.imaging_id 1
_em_image_recording.avg_electron_dose_per_image 50
_em_image_recording.average_exposure_time ?
_em_image_recording.details ?
_em_image_recording.detector_mode ?
_em_image_recording.film_or_detector_model 'GATAN K3 (6k x 4k)'
_em_image_recording.num_diffraction_images ?
_em_image_recording.num_grids_imaged ?
_em_image_recording.num_real_images ?
_em_image_recording.avg_electron_dose_per_subtomogram ?
#
_em_imaging_optics.id 1
_em_imaging_optics.imaging_id 1
_em_imaging_optics.chr_aberration_corrector ?
_em_imaging_optics.energyfilter_lower ?
_em_imaging_optics.energyfilter_name 'GIF Quantum LS'
_em_imaging_optics.energyfilter_upper ?
_em_imaging_optics.energyfilter_slit_width 20
_em_imaging_optics.phase_plate ?
_em_imaging_optics.sph_aberration_corrector ?
_em_imaging_optics.details ?
#
_em_particle_selection.id 1
_em_particle_selection.image_processing_id 1
_em_particle_selection.details ?
_em_particle_selection.method ?
_em_particle_selection.num_particles_selected 676714
_em_particle_selection.reference_model ?
#
loop_
_em_software.id
_em_software.category
_em_software.details
_em_software.name
_em_software.version
_em_software.image_processing_id
_em_software.fitting_id
_em_software.imaging_id
1 'PARTICLE SELECTION' ? Warp 1.0.9 1 ? ?
2 'IMAGE ACQUISITION' ? SerialEM ? ? ? 1
3 MASKING ? ? ? ? ? ?
4 'CTF CORRECTION' ? Warp 1.0.9 1 ? ?
5 'CTF CORRECTION' ? cryoSPARC 3.3 1 ? ?
6 'LAYERLINE INDEXING' ? ? ? ? ? ?
7 'DIFFRACTION INDEXING' ? ? ? ? ? ?
8 'MODEL FITTING' ? Coot 0.9.8 ? 1 ?
9 OTHER ? ? ? ? ? ?
10 'MODEL REFINEMENT' ? PHENIX 1.19 ? 1 ?
11 'INITIAL EULER ASSIGNMENT' ? cryoSPARC 3.3 1 ? ?
12 'FINAL EULER ASSIGNMENT' ? cryoSPARC 3.3 1 ? ?
13 CLASSIFICATION ? ? ? 1 ? ?
14 RECONSTRUCTION ? cryoSPARC 3.3 1 ? ?
#
_em_specimen.id 1
_em_specimen.experiment_id 1
_em_specimen.concentration 10
_em_specimen.details 'Reconsitituted into a peptidisc. Monodisperse peak from a Superose 6 column.'
_em_specimen.embedding_applied NO
_em_specimen.shadowing_applied NO
_em_specimen.staining_applied NO
_em_specimen.vitrification_applied YES
#
loop_
_pdbx_audit_support.funding_organization
_pdbx_audit_support.country
_pdbx_audit_support.grant_number
_pdbx_audit_support.ordinal
'The Vallee Foundation Inc.' 'United States' ? 1
'The Pew Charitable Trusts' 'United States' ? 2
#
_pdbx_entity_instance_feature.ordinal 1
_pdbx_entity_instance_feature.comp_id SXF
_pdbx_entity_instance_feature.asym_id ?
_pdbx_entity_instance_feature.seq_num ?
_pdbx_entity_instance_feature.auth_comp_id SXF
_pdbx_entity_instance_feature.auth_asym_id ?
_pdbx_entity_instance_feature.auth_seq_num ?
_pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION'
_pdbx_entity_instance_feature.details ?
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
4
;[(1~{S},3~{R},4~{S},5~{R},6~{R},8~{R},10~{S},23~{R},24~{R},25~{R},26~{R})-5-acetyloxy-6-methyl-4,26-bis(oxidanyl)-17,20-bis(oxidanylidene)-10-pentyl-24-[(~{E})-3-phenylprop-2-enoyl]oxy-2,7,9,21,27-pentaoxatricyclo[21.3.1.0^{3,8}]heptacosan-25-yl] (~{E})-2-methylbut-2-enoate
;
SXF
5 water HOH
#
loop_
_pdbx_struct_assembly_auth_evidence.id
_pdbx_struct_assembly_auth_evidence.assembly_id
_pdbx_struct_assembly_auth_evidence.experimental_support
_pdbx_struct_assembly_auth_evidence.details
1 1 'electron microscopy' ?
2 1 'gel filtration' ?
#
_space_group.crystal_system triclinic
_space_group.name_H-M_alt 'P 1'
_space_group.IT_number 1
_space_group.name_Hall 'P 1'
_space_group.id 1
#