HEADER ISOMERASE 14-JUL-22 8DOQ TITLE CRYSTAL STRUCTURE OF 2,3-DIKETO-5-METHYLTHIOPENTYL-1-PHOSPHATE TITLE 2 ENOLASE-PHOSPHATASE FROM KLEBSIELLA AEROGENES (P21 FORM) COMPND MOL_ID: 1; COMPND 2 MOLECULE: 2,3-DIKETO-5-METHYLTHIOPENTYL-1-PHOSPHATE ENOLASE- COMPND 3 PHOSPHATASE; COMPND 4 CHAIN: A, B; COMPND 5 FRAGMENT: KLAEA.01229.A.B1; COMPND 6 SYNONYM: OROTIDINE 5'-PHOSPHATE DECARBOXYLASE,OMP DECARBOXYLASE, COMPND 7 OMPDCASE,OMPDECASE; COMPND 8 EC: 4.1.1.23; COMPND 9 ENGINEERED: YES; COMPND 10 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: KLEBSIELLA AEROGENES; SOURCE 3 ORGANISM_TAXID: 548; SOURCE 4 GENE: PYRF, BXQ27_18035, HV316_11080, KCTC 2190; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS SSGCID, STRUCTURAL GENOMICS, SEATTLE STRUCTURAL GENOMICS CENTER FOR KEYWDS 2 INFECTIOUS DISEASE, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 3 22-NOV-23 8DOQ 1 REMARK REVDAT 2 18-OCT-23 8DOQ 1 REMARK REVDAT 1 27-JUL-22 8DOQ 0 JRNL AUTH L.LIU,S.SEIBOLD,K.P.BATTAILE,S.LOVELL JRNL TITL CRYSTAL STRUCTURE OF JRNL TITL 2 2,3-DIKETO-5-METHYLTHIOPENTYL-1-PHOSPHATE JRNL TITL 3 ENOLASE-PHOSPHATASE FROM KLEBSIELLA AEROGENES (P1 FORM) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.40 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 55008 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.181 REMARK 3 R VALUE (WORKING SET) : 0.179 REMARK 3 FREE R VALUE : 0.209 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.940 REMARK 3 FREE R VALUE TEST SET COUNT : 2718 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.4000 - 4.4000 0.99 2799 168 0.1735 0.1887 REMARK 3 2 4.4000 - 3.4900 1.00 2793 139 0.1563 0.1712 REMARK 3 3 3.4900 - 3.0500 1.00 2763 149 0.1726 0.1845 REMARK 3 4 3.0500 - 2.7700 1.00 2746 162 0.1816 0.2072 REMARK 3 5 2.7700 - 2.5700 1.00 2746 168 0.1784 0.2325 REMARK 3 6 2.5700 - 2.4200 1.00 2740 161 0.1747 0.2003 REMARK 3 7 2.4200 - 2.3000 1.00 2746 159 0.1779 0.2156 REMARK 3 8 2.3000 - 2.2000 1.00 2773 112 0.1727 0.2436 REMARK 3 9 2.2000 - 2.1200 1.00 2761 156 0.1841 0.2173 REMARK 3 10 2.1200 - 2.0400 1.00 2742 119 0.1800 0.2263 REMARK 3 11 2.0400 - 1.9800 1.00 2745 148 0.1824 0.2205 REMARK 3 12 1.9800 - 1.9200 1.00 2776 129 0.1820 0.2318 REMARK 3 13 1.9200 - 1.8700 1.00 2761 108 0.1984 0.2046 REMARK 3 14 1.8700 - 1.8300 1.00 2778 104 0.2040 0.2653 REMARK 3 15 1.8300 - 1.7900 1.00 2755 137 0.2097 0.2481 REMARK 3 16 1.7900 - 1.7500 0.99 2734 145 0.2023 0.2627 REMARK 3 17 1.7500 - 1.7100 1.00 2686 164 0.2019 0.2416 REMARK 3 18 1.7100 - 1.6800 1.00 2750 130 0.2177 0.3069 REMARK 3 19 1.6800 - 1.6500 0.99 2696 160 0.2409 0.2798 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.150 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.290 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.81 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.63 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 20 THROUGH 111) REMARK 3 ORIGIN FOR THE GROUP (A): 19.6398 -13.4166 9.6645 REMARK 3 T TENSOR REMARK 3 T11: 0.1517 T22: 0.1026 REMARK 3 T33: 0.1667 T12: -0.0111 REMARK 3 T13: 0.0526 T23: 0.0192 REMARK 3 L TENSOR REMARK 3 L11: 1.2414 L22: 2.0924 REMARK 3 L33: 1.4889 L12: -0.2549 REMARK 3 L13: 0.0659 L23: 0.3619 REMARK 3 S TENSOR REMARK 3 S11: 0.0371 S12: -0.1913 S13: -0.1734 REMARK 3 S21: 0.1513 S22: 0.0312 S23: -0.0647 REMARK 3 S31: 0.2004 S32: 0.1024 S33: -0.0725 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 112 THROUGH 168 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.2142 2.7350 6.1023 REMARK 3 T TENSOR REMARK 3 T11: 0.1614 T22: 0.0963 REMARK 3 T33: 0.1760 T12: 0.0015 REMARK 3 T13: 0.0962 T23: 0.0088 REMARK 3 L TENSOR REMARK 3 L11: 3.0201 L22: 1.2818 REMARK 3 L33: 1.0159 L12: 0.0031 REMARK 3 L13: 0.5064 L23: -0.2898 REMARK 3 S TENSOR REMARK 3 S11: 0.0997 S12: -0.1222 S13: 0.1427 REMARK 3 S21: 0.0326 S22: -0.0136 S23: 0.0510 REMARK 3 S31: -0.1639 S32: -0.1012 S33: -0.0704 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 169 THROUGH 249 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.2920 -10.2509 -5.1912 REMARK 3 T TENSOR REMARK 3 T11: 0.2146 T22: 0.1056 REMARK 3 T33: 0.1658 T12: 0.0270 REMARK 3 T13: 0.0519 T23: 0.0088 REMARK 3 L TENSOR REMARK 3 L11: 0.6612 L22: 4.1067 REMARK 3 L33: 0.5032 L12: -0.6996 REMARK 3 L13: -0.3792 L23: 0.4840 REMARK 3 S TENSOR REMARK 3 S11: 0.1794 S12: 0.1313 S13: -0.0142 REMARK 3 S21: -0.4877 S22: -0.1568 S23: 0.1682 REMARK 3 S31: -0.1611 S32: -0.1316 S33: -0.0245 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 20 THROUGH 111 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.3049 -7.5450 29.5606 REMARK 3 T TENSOR REMARK 3 T11: 0.3236 T22: 0.2058 REMARK 3 T33: 0.1845 T12: 0.0446 REMARK 3 T13: 0.0267 T23: -0.0077 REMARK 3 L TENSOR REMARK 3 L11: 1.2806 L22: 1.6798 REMARK 3 L33: 3.3679 L12: -0.2418 REMARK 3 L13: 0.0086 L23: 0.4722 REMARK 3 S TENSOR REMARK 3 S11: -0.0797 S12: -0.1755 S13: -0.0003 REMARK 3 S21: 0.5260 S22: 0.1821 S23: -0.1647 REMARK 3 S31: 0.1987 S32: 0.4227 S33: -0.0870 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 112 THROUGH 168 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.2136 0.1145 20.5664 REMARK 3 T TENSOR REMARK 3 T11: 0.2494 T22: 0.2064 REMARK 3 T33: 0.2706 T12: 0.0331 REMARK 3 T13: 0.1548 T23: 0.0052 REMARK 3 L TENSOR REMARK 3 L11: 0.8924 L22: 1.6196 REMARK 3 L33: 2.1758 L12: -0.4511 REMARK 3 L13: 0.4765 L23: 0.6111 REMARK 3 S TENSOR REMARK 3 S11: 0.1089 S12: -0.0904 S13: 0.1649 REMARK 3 S21: 0.0691 S22: -0.0133 S23: 0.0585 REMARK 3 S31: -0.1872 S32: -0.3223 S33: -0.0825 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 169 THROUGH 249 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.2633 5.6518 36.0239 REMARK 3 T TENSOR REMARK 3 T11: 0.4318 T22: 0.1861 REMARK 3 T33: 0.2148 T12: 0.0179 REMARK 3 T13: 0.1025 T23: -0.0074 REMARK 3 L TENSOR REMARK 3 L11: 2.7532 L22: 1.2550 REMARK 3 L33: 3.3793 L12: 0.0423 REMARK 3 L13: 0.9261 L23: 1.1071 REMARK 3 S TENSOR REMARK 3 S11: -0.0926 S12: -0.2472 S13: 0.2392 REMARK 3 S21: 0.4143 S22: 0.0500 S23: 0.0857 REMARK 3 S31: -0.1834 S32: -0.1494 S33: 0.0381 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8DOQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-JUL-22. REMARK 100 THE DEPOSITION ID IS D_1000267073. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-APR-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS-II REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97949 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI 111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.7 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 55090 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.650 REMARK 200 RESOLUTION RANGE LOW (A) : 70.500 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.09400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.35500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 8DOP REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.16 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.13 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MORPHEUS A4: 12.5%(V/V) MPD, REMARK 280 12.5%(V/V) PEG 1000, 12.5%(W/V) PEG 3350, 100 MM IMIDAZOLE/MES, REMARK 280 30 MM MGCL2 AND 30 MM CACL2, KLAEA.01229.A.B1 AT 15 MG/ML, TRAY: REMARK 280 PLATE 12527 WELL A4 DROP 1, PUCK: PSL0809, CRYO: DIRECT; REMARK 280 ELECTRON DENSITY CONSISTENT WITH A BENZOIC ACID MOLECULE WAS REMARK 280 OBSERVED AND MODELED. THE SOURCE OF THIS IS UNKNOWN AND IT MAY REMARK 280 HAVE BEEN ACQUIRED FROM THE EXPRESSION HOST, PH 6.5, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 35.25000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4730 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17540 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -37.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 HIS A 3 REMARK 465 HIS A 4 REMARK 465 HIS A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 HIS A 8 REMARK 465 MET A 9 REMARK 465 THR A 10 REMARK 465 SER A 11 REMARK 465 THR A 12 REMARK 465 ALA A 13 REMARK 465 THR A 14 REMARK 465 SER A 15 REMARK 465 SER A 16 REMARK 465 PRO A 17 REMARK 465 ARG A 18 REMARK 465 VAL A 19 REMARK 465 ARG A 200 REMARK 465 PRO A 201 REMARK 465 THR A 202 REMARK 465 GLY A 203 REMARK 465 SER A 204 REMARK 465 ASP A 205 REMARK 465 ALA A 206 REMARK 465 GLY A 207 REMARK 465 ASP A 208 REMARK 465 GLN A 209 REMARK 465 ARG A 210 REMARK 465 ARG A 211 REMARK 465 ASN A 250 REMARK 465 LYS A 251 REMARK 465 GLY A 252 REMARK 465 VAL A 253 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 HIS B 3 REMARK 465 HIS B 4 REMARK 465 HIS B 5 REMARK 465 HIS B 6 REMARK 465 HIS B 7 REMARK 465 HIS B 8 REMARK 465 MET B 9 REMARK 465 THR B 10 REMARK 465 SER B 11 REMARK 465 THR B 12 REMARK 465 ALA B 13 REMARK 465 THR B 14 REMARK 465 SER B 15 REMARK 465 SER B 16 REMARK 465 PRO B 17 REMARK 465 ARG B 18 REMARK 465 VAL B 19 REMARK 465 PRO B 201 REMARK 465 THR B 202 REMARK 465 GLY B 203 REMARK 465 SER B 204 REMARK 465 ASP B 205 REMARK 465 ALA B 206 REMARK 465 GLY B 207 REMARK 465 ASP B 208 REMARK 465 GLN B 209 REMARK 465 ARG B 210 REMARK 465 ARG B 211 REMARK 465 ASN B 250 REMARK 465 LYS B 251 REMARK 465 GLY B 252 REMARK 465 VAL B 253 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 71 CG CD OE1 NE2 REMARK 470 GLU A 128 CG CD OE1 OE2 REMARK 470 ILE A 199 CG1 CG2 CD1 REMARK 470 ILE A 212 CG1 CG2 CD1 REMARK 470 LYS B 127 CG CD CE NZ REMARK 470 GLU B 191 CG CD OE1 OE2 REMARK 470 ILE B 199 CG1 CG2 CD1 REMARK 470 ARG B 200 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 220 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 79 77.82 -104.09 REMARK 500 THR A 136 -86.95 -97.13 REMARK 500 ASP B 79 73.00 -101.70 REMARK 500 THR B 136 -91.66 -101.59 REMARK 500 REMARK 500 REMARK: NULL DBREF1 8DOQ A 9 249 UNP A0A0M3H420_KLEAE DBREF2 8DOQ A A0A0M3H420 1 241 DBREF1 8DOQ B 9 249 UNP A0A0M3H420_KLEAE DBREF2 8DOQ B A0A0M3H420 1 241 SEQADV 8DOQ MET A 1 UNP A0A0M3H42 INITIATING METHIONINE SEQADV 8DOQ ALA A 2 UNP A0A0M3H42 EXPRESSION TAG SEQADV 8DOQ HIS A 3 UNP A0A0M3H42 EXPRESSION TAG SEQADV 8DOQ HIS A 4 UNP A0A0M3H42 EXPRESSION TAG SEQADV 8DOQ HIS A 5 UNP A0A0M3H42 EXPRESSION TAG SEQADV 8DOQ HIS A 6 UNP A0A0M3H42 EXPRESSION TAG SEQADV 8DOQ HIS A 7 UNP A0A0M3H42 EXPRESSION TAG SEQADV 8DOQ HIS A 8 UNP A0A0M3H42 EXPRESSION TAG SEQADV 8DOQ GLU A 42 UNP A0A0M3H42 ASP 34 ENGINEERED MUTATION SEQADV 8DOQ MET A 152 UNP A0A0M3H42 THR 144 ENGINEERED MUTATION SEQADV 8DOQ VAL A 182 UNP A0A0M3H42 ALA 174 ENGINEERED MUTATION SEQADV 8DOQ VAL A 239 UNP A0A0M3H42 ALA 231 ENGINEERED MUTATION SEQADV 8DOQ ASN A 250 UNP A0A0M3H42 EXPRESSION TAG SEQADV 8DOQ LYS A 251 UNP A0A0M3H42 EXPRESSION TAG SEQADV 8DOQ GLY A 252 UNP A0A0M3H42 EXPRESSION TAG SEQADV 8DOQ VAL A 253 UNP A0A0M3H42 EXPRESSION TAG SEQADV 8DOQ MET B 1 UNP A0A0M3H42 INITIATING METHIONINE SEQADV 8DOQ ALA B 2 UNP A0A0M3H42 EXPRESSION TAG SEQADV 8DOQ HIS B 3 UNP A0A0M3H42 EXPRESSION TAG SEQADV 8DOQ HIS B 4 UNP A0A0M3H42 EXPRESSION TAG SEQADV 8DOQ HIS B 5 UNP A0A0M3H42 EXPRESSION TAG SEQADV 8DOQ HIS B 6 UNP A0A0M3H42 EXPRESSION TAG SEQADV 8DOQ HIS B 7 UNP A0A0M3H42 EXPRESSION TAG SEQADV 8DOQ HIS B 8 UNP A0A0M3H42 EXPRESSION TAG SEQADV 8DOQ GLU B 42 UNP A0A0M3H42 ASP 34 ENGINEERED MUTATION SEQADV 8DOQ MET B 152 UNP A0A0M3H42 THR 144 ENGINEERED MUTATION SEQADV 8DOQ VAL B 182 UNP A0A0M3H42 ALA 174 ENGINEERED MUTATION SEQADV 8DOQ VAL B 239 UNP A0A0M3H42 ALA 231 ENGINEERED MUTATION SEQADV 8DOQ ASN B 250 UNP A0A0M3H42 EXPRESSION TAG SEQADV 8DOQ LYS B 251 UNP A0A0M3H42 EXPRESSION TAG SEQADV 8DOQ GLY B 252 UNP A0A0M3H42 EXPRESSION TAG SEQADV 8DOQ VAL B 253 UNP A0A0M3H42 EXPRESSION TAG SEQRES 1 A 253 MET ALA HIS HIS HIS HIS HIS HIS MET THR SER THR ALA SEQRES 2 A 253 THR SER SER PRO ARG VAL ILE THR SER SER PRO VAL VAL SEQRES 3 A 253 VAL ALA LEU ASP TYR ASP ASN ARG ASP LYS ALA LEU ALA SEQRES 4 A 253 PHE VAL GLU ARG ILE ASP PRO ARG ASP CYS ARG LEU LYS SEQRES 5 A 253 VAL GLY LYS GLU MET PHE THR LEU LEU GLY PRO GLN PHE SEQRES 6 A 253 VAL ARG ASP LEU HIS GLN ARG GLY PHE GLU VAL PHE LEU SEQRES 7 A 253 ASP LEU LYS PHE HIS ASP ILE PRO ASN THR THR ALA ARG SEQRES 8 A 253 ALA VAL ALA ALA ALA ALA GLU LEU GLY VAL TRP MET VAL SEQRES 9 A 253 ASN VAL HIS ALA SER GLY GLY ALA ARG MET MET THR ALA SEQRES 10 A 253 ALA ARG GLU ALA LEU LEU PRO PHE GLY LYS GLU ALA PRO SEQRES 11 A 253 LEU LEU ILE ALA VAL THR VAL LEU THR SER MET GLU ALA SEQRES 12 A 253 SER ASP LEU GLN ASP LEU GLY ILE MET LEU SER PRO ALA SEQRES 13 A 253 ASP HIS ALA ALA LYS LEU ALA ALA LEU THR LYS ARG CYS SEQRES 14 A 253 GLY LEU ASP GLY VAL VAL CYS SER ALA GLN GLU ALA VAL SEQRES 15 A 253 ARG PHE LYS GLN GLU LEU GLY GLN GLU PHE LYS LEU VAL SEQRES 16 A 253 THR PRO GLY ILE ARG PRO THR GLY SER ASP ALA GLY ASP SEQRES 17 A 253 GLN ARG ARG ILE MET THR PRO GLU GLN ALA GLN GLN ALA SEQRES 18 A 253 GLY VAL ASP TYR MET VAL ILE GLY ARG PRO VAL THR GLN SEQRES 19 A 253 SER ALA ASP PRO VAL ALA THR LEU ALA SER ILE ASN ALA SEQRES 20 A 253 SER LEU ASN LYS GLY VAL SEQRES 1 B 253 MET ALA HIS HIS HIS HIS HIS HIS MET THR SER THR ALA SEQRES 2 B 253 THR SER SER PRO ARG VAL ILE THR SER SER PRO VAL VAL SEQRES 3 B 253 VAL ALA LEU ASP TYR ASP ASN ARG ASP LYS ALA LEU ALA SEQRES 4 B 253 PHE VAL GLU ARG ILE ASP PRO ARG ASP CYS ARG LEU LYS SEQRES 5 B 253 VAL GLY LYS GLU MET PHE THR LEU LEU GLY PRO GLN PHE SEQRES 6 B 253 VAL ARG ASP LEU HIS GLN ARG GLY PHE GLU VAL PHE LEU SEQRES 7 B 253 ASP LEU LYS PHE HIS ASP ILE PRO ASN THR THR ALA ARG SEQRES 8 B 253 ALA VAL ALA ALA ALA ALA GLU LEU GLY VAL TRP MET VAL SEQRES 9 B 253 ASN VAL HIS ALA SER GLY GLY ALA ARG MET MET THR ALA SEQRES 10 B 253 ALA ARG GLU ALA LEU LEU PRO PHE GLY LYS GLU ALA PRO SEQRES 11 B 253 LEU LEU ILE ALA VAL THR VAL LEU THR SER MET GLU ALA SEQRES 12 B 253 SER ASP LEU GLN ASP LEU GLY ILE MET LEU SER PRO ALA SEQRES 13 B 253 ASP HIS ALA ALA LYS LEU ALA ALA LEU THR LYS ARG CYS SEQRES 14 B 253 GLY LEU ASP GLY VAL VAL CYS SER ALA GLN GLU ALA VAL SEQRES 15 B 253 ARG PHE LYS GLN GLU LEU GLY GLN GLU PHE LYS LEU VAL SEQRES 16 B 253 THR PRO GLY ILE ARG PRO THR GLY SER ASP ALA GLY ASP SEQRES 17 B 253 GLN ARG ARG ILE MET THR PRO GLU GLN ALA GLN GLN ALA SEQRES 18 B 253 GLY VAL ASP TYR MET VAL ILE GLY ARG PRO VAL THR GLN SEQRES 19 B 253 SER ALA ASP PRO VAL ALA THR LEU ALA SER ILE ASN ALA SEQRES 20 B 253 SER LEU ASN LYS GLY VAL HET BEZ A 301 9 HET MPD A 302 8 HET MPD B 301 8 HETNAM BEZ BENZOIC ACID HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL FORMUL 3 BEZ C7 H6 O2 FORMUL 4 MPD 2(C6 H14 O2) FORMUL 6 HOH *307(H2 O) HELIX 1 AA1 ASN A 33 ILE A 44 1 12 HELIX 2 AA2 LYS A 55 GLY A 62 1 8 HELIX 3 AA3 GLY A 62 ARG A 72 1 11 HELIX 4 AA4 ILE A 85 GLY A 100 1 16 HELIX 5 AA5 GLY A 111 LEU A 123 1 13 HELIX 6 AA6 PRO A 124 ALA A 129 5 6 HELIX 7 AA7 GLU A 142 ASP A 148 1 7 HELIX 8 AA8 SER A 154 CYS A 169 1 16 HELIX 9 AA9 SER A 177 GLN A 179 5 3 HELIX 10 AB1 GLU A 180 GLY A 189 1 10 HELIX 11 AB2 THR A 214 GLY A 222 1 9 HELIX 12 AB3 GLY A 229 GLN A 234 1 6 HELIX 13 AB4 ASP A 237 LEU A 249 1 13 HELIX 14 AB5 ASN B 33 GLU B 42 1 10 HELIX 15 AB6 LYS B 55 GLY B 62 1 8 HELIX 16 AB7 GLY B 62 ARG B 72 1 11 HELIX 17 AB8 ILE B 85 GLY B 100 1 16 HELIX 18 AB9 GLY B 111 LEU B 123 1 13 HELIX 19 AC1 PRO B 124 ALA B 129 5 6 HELIX 20 AC2 GLU B 142 ASP B 148 1 7 HELIX 21 AC3 SER B 154 CYS B 169 1 16 HELIX 22 AC4 SER B 177 GLY B 189 1 13 HELIX 23 AC5 THR B 214 ALA B 221 1 8 HELIX 24 AC6 GLY B 229 GLN B 234 1 6 HELIX 25 AC7 ASP B 237 LEU B 249 1 13 SHEET 1 AA1 9 VAL A 25 LEU A 29 0 SHEET 2 AA1 9 ARG A 50 GLY A 54 1 O ARG A 50 N VAL A 27 SHEET 3 AA1 9 VAL A 76 PHE A 82 1 O PHE A 77 N LEU A 51 SHEET 4 AA1 9 MET A 103 HIS A 107 1 O MET A 103 N LEU A 78 SHEET 5 AA1 9 LEU A 131 VAL A 135 1 O VAL A 135 N VAL A 106 SHEET 6 AA1 9 GLY A 173 VAL A 175 1 O GLY A 173 N ALA A 134 SHEET 7 AA1 9 LYS A 193 THR A 196 1 O LYS A 193 N VAL A 174 SHEET 8 AA1 9 TYR A 225 ILE A 228 1 O TYR A 225 N THR A 196 SHEET 9 AA1 9 VAL A 25 LEU A 29 1 N VAL A 26 O MET A 226 SHEET 1 AA2 9 VAL B 25 LEU B 29 0 SHEET 2 AA2 9 ARG B 50 GLY B 54 1 O ARG B 50 N VAL B 27 SHEET 3 AA2 9 VAL B 76 PHE B 82 1 O PHE B 77 N LEU B 51 SHEET 4 AA2 9 MET B 103 HIS B 107 1 O MET B 103 N LEU B 78 SHEET 5 AA2 9 LEU B 131 VAL B 135 1 O VAL B 135 N VAL B 106 SHEET 6 AA2 9 GLY B 173 VAL B 175 1 O GLY B 173 N ALA B 134 SHEET 7 AA2 9 LYS B 193 THR B 196 1 O LYS B 193 N VAL B 174 SHEET 8 AA2 9 TYR B 225 ILE B 228 1 O TYR B 225 N THR B 196 SHEET 9 AA2 9 VAL B 25 LEU B 29 1 N VAL B 26 O ILE B 228 CRYST1 49.350 70.500 66.840 90.00 90.91 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020263 0.000000 0.000322 0.00000 SCALE2 0.000000 0.014184 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014963 0.00000