HEADER VIRAL PROTEIN 19-JUL-22 8DQS TITLE THE CRYSTAL STRUCTURE OF WILD TYPE PA ENDONUCLEASE TITLE 2 (2009/H1N1/CALIFORNIA) IN COMPLEX WITH COMPOUND SJ001023032 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN PA-X; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS; SOURCE 3 ORGANISM_TAXID: 11320; SOURCE 4 STRAIN: A/LUXEMBOURG/43/2009(H1N1); SOURCE 5 VARIANT: A/CALIFORNIA/04/2009 H1N1; SOURCE 6 GENE: PA; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NUCLEASE, INFLUENZA, INHIBITOR RESISTANCE, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.G.CUYPERS,J.P.SLAVISH,Z.RANKOVIC,S.W.WHITE REVDAT 3 18-OCT-23 8DQS 1 REMARK REVDAT 2 11-OCT-23 8DQS 1 JRNL REVDAT 1 14-SEP-22 8DQS 0 JRNL AUTH M.G.CUYPERS,J.P.SLAVISH,Z.RANKOVIC,S.W.WHITE JRNL TITL THE CRYSTAL STRUCTURE OF WILD TYPE PA ENDONUCLEASE JRNL TITL 2 (2009/H1N1/CALIFORNIA) IN COMPLEX WITH COMPOUND SJ001023032 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH P.J.SLAVISH,M.G.CUYPERS,M.A.RIMMER,A.ABDOLVAHABI,T.JEEVAN, REMARK 1 AUTH 2 G.KUMAR,J.A.JARUSIEWICZ,S.VAITHIYALINGAM,J.C.JONES, REMARK 1 AUTH 3 J.J.BOWLING,J.E.PRICE,R.M.DUBOIS,J.MIN,R.J.WEBBY,Z.RANKOVIC, REMARK 1 AUTH 4 S.W.WHITE REMARK 1 TITL CHEMICAL SCAFFOLD RECYCLING: STRUCTURE-GUIDED CONVERSION OF REMARK 1 TITL 2 AN HIV INTEGRASE INHIBITOR INTO A POTENT INFLUENZA VIRUS REMARK 1 TITL 3 RNA-DEPENDENT RNA POLYMERASE INHIBITOR DESIGNED TO MINIMIZE REMARK 1 TITL 4 RESISTANCE POTENTIAL. REMARK 1 REF EUR.J.MED.CHEM. V. 247 15035 2023 REMARK 1 REFN ISSN 0223-5234 REMARK 1 PMID 36603507 REMARK 1 DOI 10.1016/J.EJMECH.2022.115035 REMARK 2 REMARK 2 RESOLUTION. 2.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.09 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.1 REMARK 3 NUMBER OF REFLECTIONS : 9883 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.245 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.740 REMARK 3 FREE R VALUE TEST SET COUNT : 468 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.0900 - 3.5400 0.92 3112 145 0.1794 0.2034 REMARK 3 2 3.5300 - 2.8000 0.98 3169 161 0.2691 0.3172 REMARK 3 3 2.5500 - 2.4500 0.99 3134 162 0.2844 0.3773 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.295 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 35.281 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 72.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 98.55 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 1550 REMARK 3 ANGLE : 0.884 2094 REMARK 3 CHIRALITY : 0.052 219 REMARK 3 PLANARITY : 0.005 264 REMARK 3 DIHEDRAL : 14.116 224 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -3 THROUGH 10 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.6026 22.1085 3.0733 REMARK 3 T TENSOR REMARK 3 T11: 0.8141 T22: 0.6068 REMARK 3 T33: 0.7890 T12: -0.1117 REMARK 3 T13: 0.2006 T23: -0.0853 REMARK 3 L TENSOR REMARK 3 L11: 9.7966 L22: 4.9092 REMARK 3 L33: 7.0841 L12: -1.7016 REMARK 3 L13: -1.3521 L23: 0.3793 REMARK 3 S TENSOR REMARK 3 S11: 0.6773 S12: 1.0158 S13: 0.1010 REMARK 3 S21: 0.5076 S22: -0.7437 S23: 0.3437 REMARK 3 S31: 0.5283 S32: -0.6978 S33: 0.0908 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 11 THROUGH 23 ) REMARK 3 ORIGIN FOR THE GROUP (A): 40.1174 19.9038 5.0404 REMARK 3 T TENSOR REMARK 3 T11: 0.9508 T22: 0.6753 REMARK 3 T33: 0.6607 T12: -0.1595 REMARK 3 T13: 0.3057 T23: 0.1464 REMARK 3 L TENSOR REMARK 3 L11: 5.8861 L22: 9.1036 REMARK 3 L33: 3.2286 L12: -4.7540 REMARK 3 L13: -0.6674 L23: 1.9853 REMARK 3 S TENSOR REMARK 3 S11: 0.2848 S12: 0.9328 S13: -0.1529 REMARK 3 S21: -0.7226 S22: -0.5058 S23: -0.4689 REMARK 3 S31: 0.4035 S32: 0.2957 S33: 0.2928 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 24 THROUGH 50 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.3382 18.7688 10.8577 REMARK 3 T TENSOR REMARK 3 T11: 0.7645 T22: 0.5857 REMARK 3 T33: 0.9366 T12: -0.1372 REMARK 3 T13: 0.3700 T23: -0.0014 REMARK 3 L TENSOR REMARK 3 L11: 2.1386 L22: 3.0355 REMARK 3 L33: 3.4700 L12: 0.3261 REMARK 3 L13: 1.6348 L23: 0.6400 REMARK 3 S TENSOR REMARK 3 S11: -0.3585 S12: 0.1383 S13: -0.7203 REMARK 3 S21: -0.2336 S22: 0.2352 S23: -0.2186 REMARK 3 S31: 0.5051 S32: 0.3465 S33: 0.1414 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 51 THROUGH 126 ) REMARK 3 ORIGIN FOR THE GROUP (A): 47.9118 20.7068 22.1489 REMARK 3 T TENSOR REMARK 3 T11: 0.9690 T22: 0.6220 REMARK 3 T33: 0.7684 T12: 0.0282 REMARK 3 T13: 0.2536 T23: 0.2749 REMARK 3 L TENSOR REMARK 3 L11: 7.7477 L22: 2.4317 REMARK 3 L33: 2.5203 L12: -0.9696 REMARK 3 L13: 0.3457 L23: -0.7246 REMARK 3 S TENSOR REMARK 3 S11: -0.0027 S12: -0.4515 S13: -0.4307 REMARK 3 S21: 0.4363 S22: -0.2573 S23: -0.0684 REMARK 3 S31: 0.5103 S32: 0.4004 S33: 0.1883 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 127 THROUGH 138 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.3652 10.2548 27.4294 REMARK 3 T TENSOR REMARK 3 T11: 1.9315 T22: 1.3262 REMARK 3 T33: 0.9809 T12: -0.3271 REMARK 3 T13: 0.2919 T23: 0.4338 REMARK 3 L TENSOR REMARK 3 L11: 8.7368 L22: 3.0044 REMARK 3 L33: 3.6273 L12: 0.3180 REMARK 3 L13: 3.2633 L23: 2.7172 REMARK 3 S TENSOR REMARK 3 S11: 0.9409 S12: -0.6692 S13: -0.0943 REMARK 3 S21: -0.8177 S22: -0.4312 S23: 0.1652 REMARK 3 S31: 1.3625 S32: -0.6261 S33: -0.4321 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 139 THROUGH 149 ) REMARK 3 ORIGIN FOR THE GROUP (A): 40.2658 16.7888 28.6665 REMARK 3 T TENSOR REMARK 3 T11: 0.9327 T22: 1.0245 REMARK 3 T33: 0.7312 T12: -0.2983 REMARK 3 T13: 0.6123 T23: 0.2006 REMARK 3 L TENSOR REMARK 3 L11: 4.3491 L22: 2.3634 REMARK 3 L33: 3.1793 L12: 0.0828 REMARK 3 L13: 2.5112 L23: 2.0685 REMARK 3 S TENSOR REMARK 3 S11: 0.1983 S12: -0.4486 S13: 0.1114 REMARK 3 S21: 0.2110 S22: 0.3282 S23: -0.1008 REMARK 3 S31: 0.0239 S32: -0.1687 S33: 1.0342 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 150 THROUGH 164 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.4369 22.9044 30.0523 REMARK 3 T TENSOR REMARK 3 T11: 1.1481 T22: 1.0628 REMARK 3 T33: 0.8789 T12: -0.2414 REMARK 3 T13: 0.4575 T23: 0.1663 REMARK 3 L TENSOR REMARK 3 L11: 8.0236 L22: 3.3036 REMARK 3 L33: 4.7853 L12: 0.4413 REMARK 3 L13: 4.8855 L23: 0.2974 REMARK 3 S TENSOR REMARK 3 S11: -0.1948 S12: -1.8048 S13: -0.1079 REMARK 3 S21: 0.9338 S22: -0.1747 S23: 0.8445 REMARK 3 S31: -0.2258 S32: -0.4803 S33: 0.1007 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 165 THROUGH 184 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.9622 27.2341 19.5996 REMARK 3 T TENSOR REMARK 3 T11: 0.6156 T22: 0.6200 REMARK 3 T33: 0.8252 T12: -0.1469 REMARK 3 T13: 0.3739 T23: -0.0784 REMARK 3 L TENSOR REMARK 3 L11: 7.5436 L22: 2.6624 REMARK 3 L33: 5.3531 L12: 1.5399 REMARK 3 L13: 4.2085 L23: -0.4657 REMARK 3 S TENSOR REMARK 3 S11: -0.3835 S12: -0.9154 S13: 0.5875 REMARK 3 S21: 0.3534 S22: -0.3319 S23: 0.4086 REMARK 3 S31: 0.0357 S32: -0.6161 S33: -0.0552 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 185 THROUGH 195 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.4469 15.0239 12.4820 REMARK 3 T TENSOR REMARK 3 T11: 1.2648 T22: 0.8707 REMARK 3 T33: 1.0235 T12: -0.3663 REMARK 3 T13: 0.4373 T23: -0.2221 REMARK 3 L TENSOR REMARK 3 L11: 5.5359 L22: 3.8840 REMARK 3 L33: 4.0381 L12: -0.3205 REMARK 3 L13: 1.1837 L23: -3.8169 REMARK 3 S TENSOR REMARK 3 S11: -0.0251 S12: -0.8694 S13: 0.0037 REMARK 3 S21: -0.2681 S22: 0.4848 S23: 1.0013 REMARK 3 S31: 1.9829 S32: -1.2623 S33: -0.2806 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8DQS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-JUL-22. REMARK 100 THE DEPOSITION ID IS D_1000267210. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-APR-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9890 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.450 REMARK 200 RESOLUTION RANGE LOW (A) : 62.780 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.55 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 5VPT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.23 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.88 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES PH 7.8, 1 M AMMONIUM REMARK 280 SULFATE, 10 MM MNCL2, 10 MM MGCL2, 0.5% PVP K15, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 44.39100 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 44.39100 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 67.55850 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 44.39100 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 44.39100 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 67.55850 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 44.39100 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 44.39100 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 67.55850 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 44.39100 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 44.39100 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 67.55850 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 44.39100 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 44.39100 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 67.55850 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 44.39100 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 44.39100 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 67.55850 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 44.39100 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 44.39100 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 67.55850 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 44.39100 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 44.39100 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 67.55850 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A 196 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A -3 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 15 CD OE1 OE2 REMARK 470 ARG A 84 NE CZ NH1 NH2 REMARK 470 GLU A 101 CG CD OE1 OE2 REMARK 470 LYS A 104 CG CD CE NZ REMARK 470 LEU A 132 CG CD1 CD2 REMARK 470 LYS A 137 CG CD CE NZ REMARK 470 LYS A 139 CG CD CE NZ REMARK 470 GLU A 141 CG CD OE1 OE2 REMARK 470 LYS A 158 CG CD CE NZ REMARK 470 ARG A 170 NE CZ NH1 NH2 REMARK 470 GLN A 193 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 31 78.02 -107.47 REMARK 500 LYS A 139 -45.52 -8.66 REMARK 500 LYS A 158 27.77 47.33 REMARK 500 THR A 162 -58.68 65.98 REMARK 500 GLN A 193 44.08 -76.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 QQ4 A 204 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 201 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 41 NE2 REMARK 620 2 ASP A 108 OD2 97.1 REMARK 620 3 GLU A 119 OE2 162.1 98.7 REMARK 620 4 ILE A 120 O 77.1 89.6 94.6 REMARK 620 5 T8I A 203 O13 104.4 101.8 80.5 168.1 REMARK 620 6 T8I A 203 O15 80.3 177.4 83.8 89.5 79.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 202 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 80 OE1 REMARK 620 2 ASP A 108 OD1 89.7 REMARK 620 3 T8I A 203 O10 81.4 165.1 REMARK 620 4 T8I A 203 O13 117.2 90.9 82.7 REMARK 620 N 1 2 3 DBREF 8DQS A 1 50 UNP C6H0Y9 C6H0Y9_9INFA 1 50 DBREF 8DQS A 73 196 UNP C6H0Y9 C6H0Y9_9INFA 73 196 SEQADV 8DQS MET A -19 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DQS GLY A -18 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DQS SER A -17 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DQS SER A -16 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DQS HIS A -15 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DQS HIS A -14 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DQS HIS A -13 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DQS HIS A -12 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DQS HIS A -11 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DQS HIS A -10 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DQS SER A -9 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DQS SER A -8 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DQS GLY A -7 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DQS LEU A -6 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DQS VAL A -5 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DQS PRO A -4 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DQS ARG A -3 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DQS GLY A -2 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DQS SER A -1 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DQS HIS A 0 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DQS GLY A 51 UNP C6H0Y9 LINKER SEQADV 8DQS GLY A 52 UNP C6H0Y9 LINKER SEQADV 8DQS SER A 53 UNP C6H0Y9 LINKER SEQRES 1 A 197 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 197 LEU VAL PRO ARG GLY SER HIS MET GLU ASP PHE VAL ARG SEQRES 3 A 197 GLN CYS PHE ASN PRO MET ILE VAL GLU LEU ALA GLU LYS SEQRES 4 A 197 ALA MET LYS GLU TYR GLY GLU ASP PRO LYS ILE GLU THR SEQRES 5 A 197 ASN LYS PHE ALA ALA ILE CYS THR HIS LEU GLU VAL CYS SEQRES 6 A 197 PHE MET TYR SER ASP GLY GLY SER LYS HIS ARG PHE GLU SEQRES 7 A 197 ILE ILE GLU GLY ARG ASP ARG ILE MET ALA TRP THR VAL SEQRES 8 A 197 VAL ASN SER ILE CYS ASN THR THR GLY VAL GLU LYS PRO SEQRES 9 A 197 LYS PHE LEU PRO ASP LEU TYR ASP TYR LYS GLU ASN ARG SEQRES 10 A 197 PHE ILE GLU ILE GLY VAL THR ARG ARG GLU VAL HIS ILE SEQRES 11 A 197 TYR TYR LEU GLU LYS ALA ASN LYS ILE LYS SER GLU LYS SEQRES 12 A 197 THR HIS ILE HIS ILE PHE SER PHE THR GLY GLU GLU MET SEQRES 13 A 197 ALA THR LYS ALA ASP TYR THR LEU ASP GLU GLU SER ARG SEQRES 14 A 197 ALA ARG ILE LYS THR ARG LEU PHE THR ILE ARG GLN GLU SEQRES 15 A 197 MET ALA SER ARG SER LEU TRP ASP SER PHE ARG GLN SER SEQRES 16 A 197 GLU ARG HET MN A 201 1 HET MN A 202 1 HET T8I A 203 31 HET QQ4 A 204 41 HETNAM MN MANGANESE (II) ION HETNAM T8I 5-HYDROXY-N-[2-(2-METHOXYPYRIDIN-4-YL)ETHYL]-6-OXO-2- HETNAM 2 T8I [4-(TRIFLUOROMETHYL)PHENYL]-3,6-DIHYDROPYRIMIDINE-4- HETNAM 3 T8I CARBOXAMIDE HETNAM QQ4 HEXA VINYLPYRROLIDONE K15 HETSYN QQ4 1,1',1'',1''',1'''',1'''''-[(3R,5R,7R,9S,11R)-DODECANE- HETSYN 2 QQ4 1,3,5,7,9,11-HEXAYL]HEXA(PYRROLIDIN-2-ONE) FORMUL 2 MN 2(MN 2+) FORMUL 4 T8I C20 H17 F3 N4 O4 FORMUL 5 QQ4 C36 H56 N6 O6 FORMUL 6 HOH *16(H2 O) HELIX 1 AA1 SER A -1 PHE A 9 1 11 HELIX 2 AA2 ASN A 10 TYR A 24 1 15 HELIX 3 AA3 GLU A 31 GLY A 51 1 21 HELIX 4 AA4 ASP A 83 GLY A 99 1 17 HELIX 5 AA5 GLU A 126 LYS A 137 1 12 HELIX 6 AA6 LYS A 158 ASP A 160 5 3 HELIX 7 AA7 ASP A 164 ARG A 185 1 22 HELIX 8 AA8 LEU A 187 GLN A 193 1 7 SHEET 1 AA1 5 PHE A 76 ILE A 78 0 SHEET 2 AA1 5 LEU A 109 ASP A 111 -1 O TYR A 110 N GLU A 77 SHEET 3 AA1 5 ARG A 116 THR A 123 -1 O ARG A 116 N ASP A 111 SHEET 4 AA1 5 HIS A 144 SER A 149 1 O HIS A 144 N GLU A 119 SHEET 5 AA1 5 GLU A 154 ALA A 156 -1 O MET A 155 N ILE A 147 LINK NE2 HIS A 41 MN MN A 201 1555 1555 2.25 LINK OE1 GLU A 80 MN MN A 202 1555 1555 2.13 LINK OD2 ASP A 108 MN MN A 201 1555 1555 2.15 LINK OD1 ASP A 108 MN MN A 202 1555 1555 2.22 LINK OE2 GLU A 119 MN MN A 201 1555 1555 2.40 LINK O ILE A 120 MN MN A 201 1555 1555 2.10 LINK MN MN A 201 O13 T8I A 203 1555 1555 2.50 LINK MN MN A 201 O15 T8I A 203 1555 1555 1.90 LINK MN MN A 202 O10 T8I A 203 1555 1555 2.23 LINK MN MN A 202 O13 T8I A 203 1555 1555 1.96 CRYST1 88.782 88.782 135.117 90.00 90.00 90.00 I 4 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011264 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011264 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007401 0.00000