HEADER VIRAL PROTEIN 20-JUL-22 8DQU TITLE NANOBODY BOUND SARS-COV-2 NSP9 COMPND MOL_ID: 1; COMPND 2 MOLECULE: NANOBODY; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: NON-STRUCTURAL PROTEIN 9; COMPND 7 CHAIN: C, F; COMPND 8 SYNONYM: NSP9; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LAMA GLAMA; SOURCE 3 ORGANISM_TAXID: 9844; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PET-28; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 10 2; SOURCE 11 ORGANISM_TAXID: 2697049; SOURCE 12 GENE: REP, 1A-1B; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 14 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 15 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 16 EXPRESSION_SYSTEM_PLASMID: PET-28 KEYWDS SARS-COV-2, NSP9, NANOBODY, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR D.R.LITTLER,B.S.GULLY,J.ROSSJOHN REVDAT 3 25-OCT-23 8DQU 1 REMARK REVDAT 2 26-APR-23 8DQU 1 JRNL REVDAT 1 08-FEB-23 8DQU 0 JRNL AUTH Y.PAN,I.R.CHANDRASHEKARAN,L.TENNANT,J.ROSSJOHN,D.R.LITTLER JRNL TITL INSIDE-OUT: ANTIBODY-BINDING REVEALS POTENTIAL FOLDING JRNL TITL 2 HINGE-POINTS WITHIN THE SARS-COV-2 REPLICATION CO-FACTOR JRNL TITL 3 NSP9. JRNL REF PLOS ONE V. 18 83194 2023 JRNL REFN ESSN 1932-6203 JRNL PMID 37036856 JRNL DOI 10.1371/JOURNAL.PONE.0283194 REMARK 2 REMARK 2 RESOLUTION. 2.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.18 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.345 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.1 REMARK 3 NUMBER OF REFLECTIONS : 25462 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.229 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.917 REMARK 3 FREE R VALUE TEST SET COUNT : 1252 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.1000 - 5.0932 0.89 2616 142 0.1923 0.2117 REMARK 3 2 5.0932 - 4.0438 0.94 2714 134 0.1525 0.1820 REMARK 3 3 4.0438 - 3.5330 0.95 2674 141 0.1914 0.1966 REMARK 3 4 3.5330 - 3.2101 0.95 2708 121 0.2146 0.2705 REMARK 3 5 3.2101 - 2.9801 0.96 2680 161 0.2349 0.2799 REMARK 3 6 2.9801 - 2.8045 0.97 2728 119 0.2686 0.2769 REMARK 3 7 2.8045 - 2.6641 0.97 2710 150 0.2724 0.2902 REMARK 3 8 2.6641 - 2.5481 0.98 2713 152 0.2967 0.3324 REMARK 3 9 2.5481 - 2.4500 0.95 2667 132 0.3140 0.3410 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.343 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.649 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 57.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 82.16 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.021 3162 REMARK 3 ANGLE : 1.502 4282 REMARK 3 CHIRALITY : 0.105 461 REMARK 3 PLANARITY : 0.008 551 REMARK 3 DIHEDRAL : 24.750 1118 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 29 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 0 THROUGH 7 ) REMARK 3 ORIGIN FOR THE GROUP (A): 157.0879 162.6453 51.8541 REMARK 3 T TENSOR REMARK 3 T11: 0.9413 T22: 0.6316 REMARK 3 T33: 0.6634 T12: 0.1330 REMARK 3 T13: 0.1477 T23: 0.0470 REMARK 3 L TENSOR REMARK 3 L11: 7.5397 L22: 5.6629 REMARK 3 L33: 5.9645 L12: 1.9039 REMARK 3 L13: 2.7621 L23: 5.8239 REMARK 3 S TENSOR REMARK 3 S11: 0.0793 S12: 1.5001 S13: 0.5859 REMARK 3 S21: -0.3608 S22: -0.1153 S23: -0.1303 REMARK 3 S31: -1.2608 S32: 0.4372 S33: -0.1539 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 8 THROUGH 25 ) REMARK 3 ORIGIN FOR THE GROUP (A): 156.3606 164.4179 69.6883 REMARK 3 T TENSOR REMARK 3 T11: 0.7990 T22: 0.5544 REMARK 3 T33: 0.6222 T12: 0.1117 REMARK 3 T13: 0.0870 T23: -0.1561 REMARK 3 L TENSOR REMARK 3 L11: 2.9972 L22: 4.6283 REMARK 3 L33: 2.5528 L12: 0.6227 REMARK 3 L13: 2.6691 L23: 1.9681 REMARK 3 S TENSOR REMARK 3 S11: -0.0158 S12: -0.5264 S13: 0.3305 REMARK 3 S21: 0.4396 S22: 0.1471 S23: 0.0134 REMARK 3 S31: -0.8439 S32: -0.4291 S33: 0.1257 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 26 THROUGH 45 ) REMARK 3 ORIGIN FOR THE GROUP (A): 156.6097 153.6951 59.6514 REMARK 3 T TENSOR REMARK 3 T11: 0.5254 T22: 0.2149 REMARK 3 T33: 0.4867 T12: 0.0350 REMARK 3 T13: -0.0098 T23: -0.0319 REMARK 3 L TENSOR REMARK 3 L11: 9.3562 L22: 1.9441 REMARK 3 L33: 7.6757 L12: 0.1448 REMARK 3 L13: 4.3405 L23: 0.6036 REMARK 3 S TENSOR REMARK 3 S11: 0.1995 S12: -0.1312 S13: -0.2363 REMARK 3 S21: -0.2320 S22: 0.0123 S23: 0.0634 REMARK 3 S31: 0.0699 S32: -0.0685 S33: -0.3065 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 46 THROUGH 83 ) REMARK 3 ORIGIN FOR THE GROUP (A): 148.8733 154.8089 65.4255 REMARK 3 T TENSOR REMARK 3 T11: 0.5420 T22: 0.3845 REMARK 3 T33: 0.4430 T12: 0.0766 REMARK 3 T13: 0.1087 T23: -0.0219 REMARK 3 L TENSOR REMARK 3 L11: 7.1455 L22: 7.7145 REMARK 3 L33: 8.3706 L12: -2.4690 REMARK 3 L13: 3.9739 L23: -0.8698 REMARK 3 S TENSOR REMARK 3 S11: -0.0994 S12: -0.4792 S13: -0.2491 REMARK 3 S21: 0.5074 S22: 0.0846 S23: 0.6744 REMARK 3 S31: -0.3487 S32: -0.5036 S33: 0.0162 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 84 THROUGH 98 ) REMARK 3 ORIGIN FOR THE GROUP (A): 159.7506 156.9647 70.4376 REMARK 3 T TENSOR REMARK 3 T11: 0.6128 T22: 0.3658 REMARK 3 T33: 0.5462 T12: 0.0534 REMARK 3 T13: 0.0246 T23: -0.0149 REMARK 3 L TENSOR REMARK 3 L11: 3.5290 L22: 7.0343 REMARK 3 L33: 8.7677 L12: -2.1242 REMARK 3 L13: -1.3845 L23: 6.8553 REMARK 3 S TENSOR REMARK 3 S11: -0.0984 S12: -0.4799 S13: 0.0232 REMARK 3 S21: 0.2235 S22: 0.2692 S23: -0.2864 REMARK 3 S31: 0.8770 S32: 0.7143 S33: -0.3169 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 99 THROUGH 118 ) REMARK 3 ORIGIN FOR THE GROUP (A): 156.2678 150.1782 53.8850 REMARK 3 T TENSOR REMARK 3 T11: 0.7693 T22: 0.3663 REMARK 3 T33: 0.5930 T12: 0.0333 REMARK 3 T13: 0.0046 T23: -0.0323 REMARK 3 L TENSOR REMARK 3 L11: 5.5308 L22: 2.6658 REMARK 3 L33: 4.0767 L12: 2.9412 REMARK 3 L13: 3.5120 L23: 2.8807 REMARK 3 S TENSOR REMARK 3 S11: -0.3449 S12: 0.2794 S13: 0.1465 REMARK 3 S21: -0.9625 S22: 0.2071 S23: -0.0037 REMARK 3 S31: -0.4924 S32: 0.2060 S33: 0.1370 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 119 THROUGH 126 ) REMARK 3 ORIGIN FOR THE GROUP (A): 164.5753 163.3423 74.0726 REMARK 3 T TENSOR REMARK 3 T11: 0.6733 T22: 0.6368 REMARK 3 T33: 0.6236 T12: 0.0588 REMARK 3 T13: -0.0365 T23: -0.1671 REMARK 3 L TENSOR REMARK 3 L11: 5.0768 L22: 9.2695 REMARK 3 L33: 5.3379 L12: -0.2502 REMARK 3 L13: 4.9732 L23: -2.3581 REMARK 3 S TENSOR REMARK 3 S11: 0.1056 S12: -0.5352 S13: -0.1648 REMARK 3 S21: 0.7448 S22: 0.7028 S23: -0.4448 REMARK 3 S31: -1.2191 S32: 0.8256 S33: -0.6988 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 17 ) REMARK 3 ORIGIN FOR THE GROUP (A): 143.8844 93.4961 37.2412 REMARK 3 T TENSOR REMARK 3 T11: 0.7653 T22: 0.4568 REMARK 3 T33: 0.7308 T12: -0.0734 REMARK 3 T13: -0.1753 T23: 0.0011 REMARK 3 L TENSOR REMARK 3 L11: 3.3064 L22: 4.0863 REMARK 3 L33: 2.3163 L12: 0.8855 REMARK 3 L13: 0.9080 L23: 3.6703 REMARK 3 S TENSOR REMARK 3 S11: 0.0962 S12: 0.1202 S13: -0.2545 REMARK 3 S21: 0.4862 S22: 0.1980 S23: 0.0026 REMARK 3 S31: 1.4308 S32: -0.0449 S33: -0.3039 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 18 THROUGH 25 ) REMARK 3 ORIGIN FOR THE GROUP (A): 139.1080 95.9502 39.8035 REMARK 3 T TENSOR REMARK 3 T11: 0.8432 T22: 0.7017 REMARK 3 T33: 0.5947 T12: -0.2958 REMARK 3 T13: -0.1239 T23: -0.1315 REMARK 3 L TENSOR REMARK 3 L11: 5.2613 L22: 4.0100 REMARK 3 L33: 4.0889 L12: -2.8845 REMARK 3 L13: -3.9983 L23: 3.7984 REMARK 3 S TENSOR REMARK 3 S11: -1.1086 S12: 0.3243 S13: 0.0974 REMARK 3 S21: 1.3649 S22: -1.0659 S23: -0.1902 REMARK 3 S31: 1.2083 S32: -1.2378 S33: 1.5433 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 26 THROUGH 33 ) REMARK 3 ORIGIN FOR THE GROUP (A): 136.8072 106.0838 50.7670 REMARK 3 T TENSOR REMARK 3 T11: 0.8910 T22: 0.4978 REMARK 3 T33: 0.6203 T12: -0.2165 REMARK 3 T13: 0.0809 T23: -0.0611 REMARK 3 L TENSOR REMARK 3 L11: 8.7146 L22: 8.9861 REMARK 3 L33: 7.3259 L12: 5.5572 REMARK 3 L13: -3.6908 L23: -6.3554 REMARK 3 S TENSOR REMARK 3 S11: 0.6622 S12: -1.0279 S13: 0.6483 REMARK 3 S21: 1.5457 S22: -0.2453 S23: 0.3508 REMARK 3 S31: -0.3675 S32: -0.0931 S33: -0.5427 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 34 THROUGH 45 ) REMARK 3 ORIGIN FOR THE GROUP (A): 152.2822 101.9179 37.9248 REMARK 3 T TENSOR REMARK 3 T11: 0.6865 T22: 0.8285 REMARK 3 T33: 0.8838 T12: -0.1662 REMARK 3 T13: -0.1461 T23: -0.1504 REMARK 3 L TENSOR REMARK 3 L11: 1.5930 L22: 6.2382 REMARK 3 L33: 9.5580 L12: -1.8335 REMARK 3 L13: -1.9832 L23: 3.1805 REMARK 3 S TENSOR REMARK 3 S11: 0.5615 S12: 0.6964 S13: 0.2373 REMARK 3 S21: 0.4989 S22: 0.2382 S23: -1.5454 REMARK 3 S31: 0.4192 S32: 0.9699 S33: -1.0038 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 46 THROUGH 57 ) REMARK 3 ORIGIN FOR THE GROUP (A): 140.1167 109.5155 39.1670 REMARK 3 T TENSOR REMARK 3 T11: 0.6415 T22: 0.5161 REMARK 3 T33: 0.5770 T12: -0.2060 REMARK 3 T13: -0.0540 T23: -0.0250 REMARK 3 L TENSOR REMARK 3 L11: 0.8357 L22: 9.0859 REMARK 3 L33: 4.9254 L12: -0.6938 REMARK 3 L13: 1.7791 L23: 2.0088 REMARK 3 S TENSOR REMARK 3 S11: 0.5937 S12: 0.4851 S13: 0.7870 REMARK 3 S21: -0.2633 S22: -0.3761 S23: 0.0234 REMARK 3 S31: -0.7672 S32: 0.0545 S33: -0.1236 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 58 THROUGH 64 ) REMARK 3 ORIGIN FOR THE GROUP (A): 144.1136 110.2843 31.5673 REMARK 3 T TENSOR REMARK 3 T11: 0.8125 T22: 0.7331 REMARK 3 T33: 0.7255 T12: -0.2288 REMARK 3 T13: -0.0572 T23: 0.0820 REMARK 3 L TENSOR REMARK 3 L11: 3.9551 L22: 4.8008 REMARK 3 L33: 5.3470 L12: -4.3007 REMARK 3 L13: -4.6185 L23: 4.9550 REMARK 3 S TENSOR REMARK 3 S11: -0.7153 S12: 0.6844 S13: 1.1971 REMARK 3 S21: -1.2983 S22: 0.7754 S23: -1.2130 REMARK 3 S31: -1.0421 S32: 0.1994 S33: -0.1776 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 65 THROUGH 73 ) REMARK 3 ORIGIN FOR THE GROUP (A): 138.4494 104.7887 33.3244 REMARK 3 T TENSOR REMARK 3 T11: 0.6733 T22: 0.6230 REMARK 3 T33: 0.4743 T12: -0.2812 REMARK 3 T13: -0.0511 T23: 0.0649 REMARK 3 L TENSOR REMARK 3 L11: 8.9748 L22: 7.3267 REMARK 3 L33: 4.9481 L12: -4.3726 REMARK 3 L13: -5.9444 L23: 2.5292 REMARK 3 S TENSOR REMARK 3 S11: -0.1181 S12: 0.3657 S13: 0.9582 REMARK 3 S21: -0.1154 S22: 0.1435 S23: -0.0088 REMARK 3 S31: 0.7543 S32: -0.0589 S33: 0.1390 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 74 THROUGH 83 ) REMARK 3 ORIGIN FOR THE GROUP (A): 135.4966 99.4885 39.8007 REMARK 3 T TENSOR REMARK 3 T11: 0.7520 T22: 0.6486 REMARK 3 T33: 0.5414 T12: -0.2951 REMARK 3 T13: -0.0682 T23: 0.0175 REMARK 3 L TENSOR REMARK 3 L11: 6.2666 L22: 5.9073 REMARK 3 L33: 3.3574 L12: -3.1386 REMARK 3 L13: -4.5546 L23: 2.7453 REMARK 3 S TENSOR REMARK 3 S11: 0.0027 S12: 0.5035 S13: 0.5670 REMARK 3 S21: 0.4072 S22: -0.0944 S23: 0.5679 REMARK 3 S31: 0.9188 S32: -0.8833 S33: 0.4005 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 84 THROUGH 98 ) REMARK 3 ORIGIN FOR THE GROUP (A): 148.2311 99.0510 31.7721 REMARK 3 T TENSOR REMARK 3 T11: 0.5440 T22: 0.6604 REMARK 3 T33: 0.7021 T12: -0.1982 REMARK 3 T13: -0.0727 T23: -0.1014 REMARK 3 L TENSOR REMARK 3 L11: 4.1866 L22: 5.8029 REMARK 3 L33: 6.7981 L12: 1.7884 REMARK 3 L13: 3.1800 L23: 2.8550 REMARK 3 S TENSOR REMARK 3 S11: -0.0726 S12: 0.5904 S13: -0.2271 REMARK 3 S21: 0.0502 S22: -0.0126 S23: -0.4464 REMARK 3 S31: -0.1430 S32: 0.7948 S33: 0.0667 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 99 THROUGH 108 ) REMARK 3 ORIGIN FOR THE GROUP (A): 144.8191 111.4669 48.9318 REMARK 3 T TENSOR REMARK 3 T11: 0.8225 T22: 0.5678 REMARK 3 T33: 0.5989 T12: -0.2136 REMARK 3 T13: -0.0764 T23: -0.0827 REMARK 3 L TENSOR REMARK 3 L11: 5.2783 L22: 5.3760 REMARK 3 L33: 3.8374 L12: -0.4278 REMARK 3 L13: -0.0835 L23: -0.5262 REMARK 3 S TENSOR REMARK 3 S11: -0.5806 S12: 0.2290 S13: -0.1233 REMARK 3 S21: 1.0439 S22: 0.1794 S23: -0.7177 REMARK 3 S31: -0.0252 S32: -0.0537 S33: 0.3289 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 109 THROUGH 118 ) REMARK 3 ORIGIN FOR THE GROUP (A): 150.6778 102.2813 47.0172 REMARK 3 T TENSOR REMARK 3 T11: 1.1656 T22: 0.7756 REMARK 3 T33: 1.0017 T12: -0.1218 REMARK 3 T13: -0.3325 T23: -0.1580 REMARK 3 L TENSOR REMARK 3 L11: 5.8639 L22: 5.9176 REMARK 3 L33: 5.3810 L12: -4.7261 REMARK 3 L13: -4.1243 L23: 5.5295 REMARK 3 S TENSOR REMARK 3 S11: -0.0648 S12: -1.1758 S13: 0.5512 REMARK 3 S21: 2.9371 S22: -0.4508 S23: -0.5857 REMARK 3 S31: 1.2165 S32: 0.1089 S33: 0.5722 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 119 THROUGH 126 ) REMARK 3 ORIGIN FOR THE GROUP (A): 149.8802 91.1657 28.4864 REMARK 3 T TENSOR REMARK 3 T11: 0.7311 T22: 0.6294 REMARK 3 T33: 0.6879 T12: -0.1483 REMARK 3 T13: -0.1392 T23: -0.0526 REMARK 3 L TENSOR REMARK 3 L11: 8.3207 L22: 6.7189 REMARK 3 L33: 4.4520 L12: -0.7049 REMARK 3 L13: -4.5063 L23: -3.2502 REMARK 3 S TENSOR REMARK 3 S11: 0.1708 S12: 0.5219 S13: 0.3657 REMARK 3 S21: -0.0672 S22: 0.1292 S23: -0.3445 REMARK 3 S31: 1.3623 S32: 0.4713 S33: -0.3694 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 24 THROUGH 28 ) REMARK 3 ORIGIN FOR THE GROUP (A): 138.5003 140.2569 45.2390 REMARK 3 T TENSOR REMARK 3 T11: 1.2249 T22: 1.3361 REMARK 3 T33: 2.1040 T12: -0.2385 REMARK 3 T13: 0.1609 T23: 0.2315 REMARK 3 L TENSOR REMARK 3 L11: 3.8079 L22: 3.9021 REMARK 3 L33: 4.3861 L12: 3.1676 REMARK 3 L13: -2.9935 L23: -3.5229 REMARK 3 S TENSOR REMARK 3 S11: 0.5964 S12: -1.8603 S13: -0.2465 REMARK 3 S21: -1.1096 S22: -1.6076 S23: -2.5177 REMARK 3 S31: -0.2061 S32: 0.7013 S33: 1.0220 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 29 THROUGH 33 ) REMARK 3 ORIGIN FOR THE GROUP (A): 146.1358 130.7504 39.6422 REMARK 3 T TENSOR REMARK 3 T11: 2.2948 T22: 1.3057 REMARK 3 T33: 1.6142 T12: -0.3920 REMARK 3 T13: -0.1738 T23: 0.3141 REMARK 3 L TENSOR REMARK 3 L11: 5.1032 L22: 5.1094 REMARK 3 L33: 6.3562 L12: 5.0585 REMARK 3 L13: 5.6886 L23: 5.7149 REMARK 3 S TENSOR REMARK 3 S11: 0.3135 S12: 1.4130 S13: 2.4298 REMARK 3 S21: -2.1785 S22: -0.9126 S23: 0.5621 REMARK 3 S31: 1.4842 S32: 0.7478 S33: 0.5677 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 34 THROUGH 38 ) REMARK 3 ORIGIN FOR THE GROUP (A): 140.2769 128.9690 33.9103 REMARK 3 T TENSOR REMARK 3 T11: 2.2475 T22: 1.8192 REMARK 3 T33: 1.7610 T12: 0.2153 REMARK 3 T13: -0.5335 T23: 0.0453 REMARK 3 L TENSOR REMARK 3 L11: 7.1947 L22: 5.0165 REMARK 3 L33: 3.5528 L12: -2.7222 REMARK 3 L13: -4.3763 L23: -0.2262 REMARK 3 S TENSOR REMARK 3 S11: -0.7075 S12: -2.5954 S13: -1.1743 REMARK 3 S21: 3.8227 S22: 3.0801 S23: -0.9741 REMARK 3 S31: 4.2657 S32: 3.0199 S33: -2.3260 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 39 THROUGH 57 ) REMARK 3 ORIGIN FOR THE GROUP (A): 141.4120 136.6348 58.3565 REMARK 3 T TENSOR REMARK 3 T11: 0.8026 T22: 0.6476 REMARK 3 T33: 1.0143 T12: -0.1562 REMARK 3 T13: -0.0491 T23: 0.0344 REMARK 3 L TENSOR REMARK 3 L11: 8.5123 L22: 6.3824 REMARK 3 L33: 5.6044 L12: -1.0148 REMARK 3 L13: -1.1069 L23: 3.1039 REMARK 3 S TENSOR REMARK 3 S11: -0.1497 S12: -1.0342 S13: -0.3106 REMARK 3 S21: 0.6427 S22: -0.4095 S23: 1.5710 REMARK 3 S31: 0.9508 S32: -0.9687 S33: 0.5043 REMARK 3 TLS GROUP : 24 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 58 THROUGH 86 ) REMARK 3 ORIGIN FOR THE GROUP (A): 145.5184 139.0715 57.1282 REMARK 3 T TENSOR REMARK 3 T11: 0.6723 T22: 0.4149 REMARK 3 T33: 1.1075 T12: -0.0864 REMARK 3 T13: 0.1058 T23: -0.0415 REMARK 3 L TENSOR REMARK 3 L11: 3.8396 L22: 3.3960 REMARK 3 L33: 4.3249 L12: 3.0491 REMARK 3 L13: 0.1140 L23: 2.2015 REMARK 3 S TENSOR REMARK 3 S11: -0.1808 S12: -0.1479 S13: -1.5210 REMARK 3 S21: 0.5783 S22: -0.1121 S23: 1.3299 REMARK 3 S31: 0.2363 S32: -0.6177 S33: 0.2058 REMARK 3 TLS GROUP : 25 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 87 THROUGH 111 ) REMARK 3 ORIGIN FOR THE GROUP (A): 147.6657 135.6550 52.2669 REMARK 3 T TENSOR REMARK 3 T11: 0.9924 T22: 0.6353 REMARK 3 T33: 0.8402 T12: -0.0792 REMARK 3 T13: -0.0279 T23: -0.1299 REMARK 3 L TENSOR REMARK 3 L11: 8.2057 L22: 9.5815 REMARK 3 L33: 4.5105 L12: -3.2732 REMARK 3 L13: 1.7591 L23: 2.8824 REMARK 3 S TENSOR REMARK 3 S11: 0.8199 S12: 0.4029 S13: -0.7788 REMARK 3 S21: -0.3749 S22: -0.3769 S23: 0.0547 REMARK 3 S31: 0.7010 S32: 0.2040 S33: -0.4617 REMARK 3 TLS GROUP : 26 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 26 THROUGH 46 ) REMARK 3 ORIGIN FOR THE GROUP (A): 141.8362 128.4359 56.4856 REMARK 3 T TENSOR REMARK 3 T11: 0.8191 T22: 0.8161 REMARK 3 T33: 1.1258 T12: -0.2396 REMARK 3 T13: -0.1358 T23: 0.1148 REMARK 3 L TENSOR REMARK 3 L11: 7.1384 L22: 8.6196 REMARK 3 L33: 2.1929 L12: -0.8395 REMARK 3 L13: 2.2587 L23: -1.8864 REMARK 3 S TENSOR REMARK 3 S11: 0.1215 S12: -1.3244 S13: 0.2545 REMARK 3 S21: 0.2480 S22: -0.2608 S23: 0.7608 REMARK 3 S31: 1.2733 S32: -0.4541 S33: -0.1244 REMARK 3 TLS GROUP : 27 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 47 THROUGH 52 ) REMARK 3 ORIGIN FOR THE GROUP (A): 132.3455 124.6072 37.2711 REMARK 3 T TENSOR REMARK 3 T11: 1.4530 T22: 0.8831 REMARK 3 T33: 1.6191 T12: -0.0773 REMARK 3 T13: -0.6305 T23: -0.0081 REMARK 3 L TENSOR REMARK 3 L11: 5.9651 L22: 1.7131 REMARK 3 L33: 4.3648 L12: -2.9900 REMARK 3 L13: -5.0366 L23: 2.5298 REMARK 3 S TENSOR REMARK 3 S11: -1.0200 S12: 1.6886 S13: 2.8127 REMARK 3 S21: 0.0742 S22: -1.3361 S23: 1.6476 REMARK 3 S31: -2.2304 S32: -1.3001 S33: 1.7171 REMARK 3 TLS GROUP : 28 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 53 THROUGH 86 ) REMARK 3 ORIGIN FOR THE GROUP (A): 142.6481 121.3098 43.0594 REMARK 3 T TENSOR REMARK 3 T11: 0.7275 T22: 0.4158 REMARK 3 T33: 0.9438 T12: -0.1511 REMARK 3 T13: -0.1977 T23: 0.0320 REMARK 3 L TENSOR REMARK 3 L11: 2.0145 L22: 9.5027 REMARK 3 L33: 6.6481 L12: -1.7682 REMARK 3 L13: 1.0265 L23: 2.7524 REMARK 3 S TENSOR REMARK 3 S11: -0.6780 S12: 0.6604 S13: 1.4519 REMARK 3 S21: -0.5054 S22: 0.2838 S23: 0.2654 REMARK 3 S31: -0.6807 S32: 0.2804 S33: 0.3617 REMARK 3 TLS GROUP : 29 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 87 THROUGH 109 ) REMARK 3 ORIGIN FOR THE GROUP (A): 144.8246 123.4684 48.2850 REMARK 3 T TENSOR REMARK 3 T11: 1.1814 T22: 0.5664 REMARK 3 T33: 1.0177 T12: -0.2068 REMARK 3 T13: -0.1716 T23: -0.0764 REMARK 3 L TENSOR REMARK 3 L11: 6.0481 L22: 4.6209 REMARK 3 L33: 5.1639 L12: 1.0958 REMARK 3 L13: 1.2649 L23: 2.4121 REMARK 3 S TENSOR REMARK 3 S11: 0.1824 S12: 0.1641 S13: -0.0078 REMARK 3 S21: -0.0997 S22: 0.0061 S23: 0.5676 REMARK 3 S31: -0.5631 S32: 0.4684 S33: -0.2066 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 2 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN F AND (RESSEQ 27:34 OR RESSEQ REMARK 3 36:75 OR RESSEQ 86 OR (RESID 87 AND (NAME REMARK 3 N OR NAME CA OR NAME C OR NAME CB OR NAME REMARK 3 CG OR NAME CD1 OR NAME CD2 OR NAME CE1 OR REMARK 3 NAME CE2 OR NAME CZ OR NAME OH )) OR REMARK 3 RESSEQ 88:108 OR (RESID 109 AND (NAME O REMARK 3 OR NAME N OR NAME CA OR NAME C OR NAME CB REMARK 3 OR NAME OG1)))) REMARK 3 SELECTION : (CHAIN C AND (RESSEQ 27:34 OR (RESID 36 REMARK 3 AND (NAME N OR NAME CA OR NAME C OR NAME REMARK 3 O OR NAME CB )) OR RESSEQ 37:75 OR RESSEQ REMARK 3 86 OR (RESID 87 AND (NAME O OR NAME N OR REMARK 3 NAME CA OR NAME C OR NAME CB OR NAME CG REMARK 3 OR NAME CD1 OR NAME CD2 OR NAME CE1 OR REMARK 3 NAME CE2 OR NAME CZ )) OR RESSEQ 88:108 REMARK 3 OR (RESID 109 AND (NAME N OR NAME CA OR REMARK 3 NAME C OR NAME CB OR NAME OG1 OR NAME CG2) REMARK 3 ))) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : 2 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESSEQ 2:20 OR (RESID 21 REMARK 3 AND (NAME N OR NAME C OR NAME O OR NAME REMARK 3 CB OR NAME OG )) OR RESSEQ 22:64 OR REMARK 3 RESSEQ 66:88 OR RESSEQ 90:101 OR RESSEQ REMARK 3 103:116 OR RESSEQ 118:126)) REMARK 3 SELECTION : (CHAIN B AND (RESSEQ 2:20 OR (RESID 21 REMARK 3 AND (NAME N OR NAME C OR NAME O OR NAME REMARK 3 CB OR NAME OG )) OR RESSEQ 22:64 OR REMARK 3 RESSEQ 66:88 OR RESSEQ 90:101 OR RESSEQ REMARK 3 103:116 OR RESSEQ 118:126)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8DQU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-JUL-22. REMARK 100 THE DEPOSITION ID IS D_1000267184. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-FEB-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 REMARK 200 MONOCHROMATOR : SILICON CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25484 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.450 REMARK 200 RESOLUTION RANGE LOW (A) : 47.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.3 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.58 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 7KRI REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.8M AMMONIUM SULFATE, 0.1M MES PH REMARK 280 6.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 6 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z REMARK 290 6555 X-Y,X,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: 24-MERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: 24-MERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 39250 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 103180 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -361.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 247.53750 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 142.91584 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 285.83168 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 -1.000000 0.000000 0.000000 165.02500 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 285.83168 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 5 0.500000 0.866025 0.000000 -82.51250 REMARK 350 BIOMT2 5 -0.866025 0.500000 0.000000 142.91584 REMARK 350 BIOMT3 5 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 6 0.500000 -0.866025 0.000000 165.02500 REMARK 350 BIOMT2 6 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 127 REMARK 465 ALA A 128 REMARK 465 TYR A 129 REMARK 465 PRO A 130 REMARK 465 TYR A 131 REMARK 465 ASP A 132 REMARK 465 VAL A 133 REMARK 465 PRO A 134 REMARK 465 ASP A 135 REMARK 465 TYR A 136 REMARK 465 GLY A 137 REMARK 465 SER A 138 REMARK 465 HIS A 139 REMARK 465 HIS A 140 REMARK 465 HIS A 141 REMARK 465 HIS A 142 REMARK 465 HIS A 143 REMARK 465 HIS A 144 REMARK 465 MET B 0 REMARK 465 ALA B 127 REMARK 465 ALA B 128 REMARK 465 TYR B 129 REMARK 465 PRO B 130 REMARK 465 TYR B 131 REMARK 465 ASP B 132 REMARK 465 VAL B 133 REMARK 465 PRO B 134 REMARK 465 ASP B 135 REMARK 465 TYR B 136 REMARK 465 GLY B 137 REMARK 465 SER B 138 REMARK 465 HIS B 139 REMARK 465 HIS B 140 REMARK 465 HIS B 141 REMARK 465 HIS B 142 REMARK 465 HIS B 143 REMARK 465 HIS B 144 REMARK 465 ASN C 1 REMARK 465 ASN C 2 REMARK 465 GLU C 3 REMARK 465 LEU C 4 REMARK 465 SER C 5 REMARK 465 PRO C 6 REMARK 465 VAL C 7 REMARK 465 ALA C 8 REMARK 465 LEU C 9 REMARK 465 ARG C 10 REMARK 465 GLN C 11 REMARK 465 MET C 12 REMARK 465 SER C 13 REMARK 465 CYS C 14 REMARK 465 ALA C 15 REMARK 465 ALA C 16 REMARK 465 GLY C 17 REMARK 465 THR C 18 REMARK 465 THR C 19 REMARK 465 GLN C 20 REMARK 465 THR C 21 REMARK 465 ALA C 22 REMARK 465 CYS C 23 REMARK 465 VAL C 76 REMARK 465 THR C 77 REMARK 465 ASP C 78 REMARK 465 THR C 79 REMARK 465 PRO C 80 REMARK 465 LYS C 81 REMARK 465 GLY C 82 REMARK 465 PRO C 83 REMARK 465 LYS C 84 REMARK 465 VAL C 85 REMARK 465 LEU C 112 REMARK 465 GLN C 113 REMARK 465 ASN F 1 REMARK 465 ASN F 2 REMARK 465 GLU F 3 REMARK 465 LEU F 4 REMARK 465 SER F 5 REMARK 465 PRO F 6 REMARK 465 VAL F 7 REMARK 465 ALA F 8 REMARK 465 LEU F 9 REMARK 465 ARG F 10 REMARK 465 GLN F 11 REMARK 465 MET F 12 REMARK 465 SER F 13 REMARK 465 CYS F 14 REMARK 465 ALA F 15 REMARK 465 ALA F 16 REMARK 465 GLY F 17 REMARK 465 THR F 18 REMARK 465 THR F 19 REMARK 465 GLN F 20 REMARK 465 THR F 21 REMARK 465 ALA F 22 REMARK 465 CYS F 23 REMARK 465 THR F 24 REMARK 465 ASP F 25 REMARK 465 VAL F 76 REMARK 465 THR F 77 REMARK 465 ASP F 78 REMARK 465 THR F 79 REMARK 465 PRO F 80 REMARK 465 LYS F 81 REMARK 465 GLY F 82 REMARK 465 PRO F 83 REMARK 465 LYS F 84 REMARK 465 VAL F 85 REMARK 465 VAL F 110 REMARK 465 ARG F 111 REMARK 465 LEU F 112 REMARK 465 GLN F 113 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP C 26 CG OD1 OD2 REMARK 470 ARG C 39 CG CD NE CZ NH1 NH2 REMARK 470 ARG C 74 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 86 CG CD CE NZ REMARK 470 ARG C 111 CG CD NE CZ NH1 NH2 REMARK 470 LYS F 36 CG CD CE NZ REMARK 470 ARG F 39 CG CD NE CZ NH1 NH2 REMARK 470 ARG F 74 CG CD NE CZ NH1 NH2 REMARK 470 LYS F 86 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLU A 89 O HOH A 301 1.83 REMARK 500 OE1 GLU A 46 O HOH A 302 1.96 REMARK 500 OD1 ASN F 96 O HOH F 201 1.97 REMARK 500 CD1 LEU F 45 O TYR F 87 1.99 REMARK 500 NH1 ARG B 67 OD2 ASP B 90 2.07 REMARK 500 OG1 THR B 69 O HOH B 201 2.09 REMARK 500 CD GLU A 46 O HOH A 302 2.14 REMARK 500 O VAL F 102 CD1 LEU F 106 2.15 REMARK 500 OD2 ASP B 59 OH TYR F 66 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS B 96 CA - CB - SG ANGL. DEV. = 8.2 DEGREES REMARK 500 LYS F 36 CB - CA - C ANGL. DEV. = -18.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 28 74.27 -68.58 REMARK 500 TYR A 103 32.52 74.47 REMARK 500 ALA B 28 73.79 -68.04 REMARK 500 ALA B 40 -179.64 -61.53 REMARK 500 ALA B 92 177.31 173.57 REMARK 500 ASP C 26 -163.96 -114.52 REMARK 500 REMARK 500 REMARK: NULL DBREF 8DQU A 0 144 PDB 8DQU 8DQU 0 144 DBREF 8DQU B 0 144 PDB 8DQU 8DQU 0 144 DBREF 8DQU C 1 113 UNP P0DTD1 R1AB_SARS2 4141 4253 DBREF 8DQU F 1 113 UNP P0DTD1 R1AB_SARS2 4141 4253 SEQRES 1 A 145 MET GLN VAL GLN LEU GLN GLU SER GLY GLY GLY LEU VAL SEQRES 2 A 145 GLN PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER SEQRES 3 A 145 GLY LEU ALA PHE SER MET TYR THR MET GLY TRP PHE ARG SEQRES 4 A 145 GLN ALA PRO GLY LYS GLU ARG GLU PHE VAL ALA MET ILE SEQRES 5 A 145 ILE SER SER GLY ASP SER THR ASP TYR ALA ASP SER VAL SEQRES 6 A 145 LYS GLY ARG PHE THR ILE SER ARG ASP ASN GLY LYS ASN SEQRES 7 A 145 THR VAL TYR LEU GLN MET ASP SER LEU LYS PRO GLU ASP SEQRES 8 A 145 THR ALA VAL TYR TYR CYS ALA ALA PRO LYS PHE ARG TYR SEQRES 9 A 145 TYR PHE SER THR SER PRO GLY ASP PHE ASP SER TRP GLY SEQRES 10 A 145 GLN GLY THR GLN VAL THR VAL SER SER ALA ALA ALA TYR SEQRES 11 A 145 PRO TYR ASP VAL PRO ASP TYR GLY SER HIS HIS HIS HIS SEQRES 12 A 145 HIS HIS SEQRES 1 B 145 MET GLN VAL GLN LEU GLN GLU SER GLY GLY GLY LEU VAL SEQRES 2 B 145 GLN PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER SEQRES 3 B 145 GLY LEU ALA PHE SER MET TYR THR MET GLY TRP PHE ARG SEQRES 4 B 145 GLN ALA PRO GLY LYS GLU ARG GLU PHE VAL ALA MET ILE SEQRES 5 B 145 ILE SER SER GLY ASP SER THR ASP TYR ALA ASP SER VAL SEQRES 6 B 145 LYS GLY ARG PHE THR ILE SER ARG ASP ASN GLY LYS ASN SEQRES 7 B 145 THR VAL TYR LEU GLN MET ASP SER LEU LYS PRO GLU ASP SEQRES 8 B 145 THR ALA VAL TYR TYR CYS ALA ALA PRO LYS PHE ARG TYR SEQRES 9 B 145 TYR PHE SER THR SER PRO GLY ASP PHE ASP SER TRP GLY SEQRES 10 B 145 GLN GLY THR GLN VAL THR VAL SER SER ALA ALA ALA TYR SEQRES 11 B 145 PRO TYR ASP VAL PRO ASP TYR GLY SER HIS HIS HIS HIS SEQRES 12 B 145 HIS HIS SEQRES 1 C 113 ASN ASN GLU LEU SER PRO VAL ALA LEU ARG GLN MET SER SEQRES 2 C 113 CYS ALA ALA GLY THR THR GLN THR ALA CYS THR ASP ASP SEQRES 3 C 113 ASN ALA LEU ALA TYR TYR ASN THR THR LYS GLY GLY ARG SEQRES 4 C 113 PHE VAL LEU ALA LEU LEU SER ASP LEU GLN ASP LEU LYS SEQRES 5 C 113 TRP ALA ARG PHE PRO LYS SER ASP GLY THR GLY THR ILE SEQRES 6 C 113 TYR THR GLU LEU GLU PRO PRO CYS ARG PHE VAL THR ASP SEQRES 7 C 113 THR PRO LYS GLY PRO LYS VAL LYS TYR LEU TYR PHE ILE SEQRES 8 C 113 LYS GLY LEU ASN ASN LEU ASN ARG GLY MET VAL LEU GLY SEQRES 9 C 113 SER LEU ALA ALA THR VAL ARG LEU GLN SEQRES 1 F 113 ASN ASN GLU LEU SER PRO VAL ALA LEU ARG GLN MET SER SEQRES 2 F 113 CYS ALA ALA GLY THR THR GLN THR ALA CYS THR ASP ASP SEQRES 3 F 113 ASN ALA LEU ALA TYR TYR ASN THR THR LYS GLY GLY ARG SEQRES 4 F 113 PHE VAL LEU ALA LEU LEU SER ASP LEU GLN ASP LEU LYS SEQRES 5 F 113 TRP ALA ARG PHE PRO LYS SER ASP GLY THR GLY THR ILE SEQRES 6 F 113 TYR THR GLU LEU GLU PRO PRO CYS ARG PHE VAL THR ASP SEQRES 7 F 113 THR PRO LYS GLY PRO LYS VAL LYS TYR LEU TYR PHE ILE SEQRES 8 F 113 LYS GLY LEU ASN ASN LEU ASN ARG GLY MET VAL LEU GLY SEQRES 9 F 113 SER LEU ALA ALA THR VAL ARG LEU GLN FORMUL 5 HOH *25(H2 O) HELIX 1 AA1 ALA A 28 TYR A 32 5 5 HELIX 2 AA2 LYS A 87 THR A 91 5 5 HELIX 3 AA3 SER A 108 PHE A 112 5 5 HELIX 4 AA4 ALA B 28 TYR B 32 5 5 HELIX 5 AA5 ASP B 62 LYS B 65 5 4 HELIX 6 AA6 LYS B 87 THR B 91 5 5 HELIX 7 AA7 SER B 108 PHE B 112 5 5 HELIX 8 AA8 ASN C 98 ARG C 111 1 14 HELIX 9 AA9 ASN F 98 THR F 109 1 12 SHEET 1 AA1 4 GLN A 3 SER A 7 0 SHEET 2 AA1 4 LEU A 18 SER A 25 -1 O SER A 25 N GLN A 3 SHEET 3 AA1 4 THR A 78 MET A 83 -1 O LEU A 81 N LEU A 20 SHEET 4 AA1 4 PHE A 68 ASP A 73 -1 N THR A 69 O GLN A 82 SHEET 1 AA2 6 GLY A 10 VAL A 12 0 SHEET 2 AA2 6 THR A 119 VAL A 123 1 O THR A 122 N VAL A 12 SHEET 3 AA2 6 ALA A 92 ALA A 98 -1 N ALA A 92 O VAL A 121 SHEET 4 AA2 6 MET A 34 GLN A 39 -1 N GLY A 35 O ALA A 97 SHEET 5 AA2 6 GLU A 46 ILE A 51 -1 O ILE A 51 N MET A 34 SHEET 6 AA2 6 THR A 58 TYR A 60 -1 O ASP A 59 N MET A 50 SHEET 1 AA3 4 GLY A 10 VAL A 12 0 SHEET 2 AA3 4 THR A 119 VAL A 123 1 O THR A 122 N VAL A 12 SHEET 3 AA3 4 ALA A 92 ALA A 98 -1 N ALA A 92 O VAL A 121 SHEET 4 AA3 4 SER A 114 TRP A 115 -1 O SER A 114 N ALA A 98 SHEET 1 AA4 3 TYR A 104 SER A 106 0 SHEET 2 AA4 3 THR C 64 GLU C 68 -1 O TYR C 66 N PHE A 105 SHEET 3 AA4 3 TRP C 53 PRO C 57 -1 N ALA C 54 O THR C 67 SHEET 1 AA5 4 GLN B 3 SER B 7 0 SHEET 2 AA5 4 LEU B 18 SER B 25 -1 O SER B 25 N GLN B 3 SHEET 3 AA5 4 THR B 78 MET B 83 -1 O MET B 83 N LEU B 18 SHEET 4 AA5 4 PHE B 68 ASP B 73 -1 N ASP B 73 O THR B 78 SHEET 1 AA6 6 GLY B 10 VAL B 12 0 SHEET 2 AA6 6 THR B 119 VAL B 123 1 O THR B 122 N GLY B 10 SHEET 3 AA6 6 ALA B 92 ALA B 98 -1 N TYR B 94 O THR B 119 SHEET 4 AA6 6 MET B 34 GLN B 39 -1 N PHE B 37 O TYR B 95 SHEET 5 AA6 6 GLU B 46 ILE B 51 -1 O ILE B 51 N MET B 34 SHEET 6 AA6 6 THR B 58 TYR B 60 -1 O ASP B 59 N MET B 50 SHEET 1 AA7 4 GLY B 10 VAL B 12 0 SHEET 2 AA7 4 THR B 119 VAL B 123 1 O THR B 122 N GLY B 10 SHEET 3 AA7 4 ALA B 92 ALA B 98 -1 N TYR B 94 O THR B 119 SHEET 4 AA7 4 SER B 114 TRP B 115 -1 O SER B 114 N ALA B 98 SHEET 1 AA8 3 TYR B 104 SER B 106 0 SHEET 2 AA8 3 THR F 64 GLU F 68 -1 O TYR F 66 N PHE B 105 SHEET 3 AA8 3 TRP F 53 PRO F 57 -1 N ALA F 54 O THR F 67 SHEET 1 AA9 4 ALA C 30 TYR C 31 0 SHEET 2 AA9 4 ARG C 39 SER C 46 -1 O PHE C 40 N ALA C 30 SHEET 3 AA9 4 ARG F 39 SER F 46 -1 O LEU F 45 N ARG C 39 SHEET 4 AA9 4 ALA F 28 TYR F 31 -1 N LEU F 29 O PHE F 40 SHEET 1 AB1 4 TYR C 87 PHE C 90 0 SHEET 2 AB1 4 ARG C 39 SER C 46 -1 N LEU C 44 O TYR C 89 SHEET 3 AB1 4 ARG F 39 SER F 46 -1 O LEU F 45 N ARG C 39 SHEET 4 AB1 4 TYR F 87 PHE F 90 -1 O TYR F 89 N LEU F 44 SSBOND 1 CYS A 22 CYS A 96 1555 1555 2.65 SSBOND 2 CYS B 22 CYS B 96 1555 1555 2.09 CRYST1 165.025 165.025 46.002 90.00 90.00 120.00 P 6 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006060 0.003499 0.000000 0.00000 SCALE2 0.000000 0.006997 0.000000 0.00000 SCALE3 0.000000 0.000000 0.021738 0.00000