HEADER VIRAL PROTEIN/IMMUNE SYSTEM 30-JUL-22 8DW2 TITLE CRYO-EM STRUCTURE OF SARS-COV-2 RBD IN COMPLEX WITH ANTI-SARS-COV-2 TITLE 2 DARPIN,SR22, AND TWO ANTIBODY FABS, S309 AND CR3022 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SR22; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: SPIKE PROTEIN S1; COMPND 7 CHAIN: B; COMPND 8 FRAGMENT: RECEPTOR BINDING DOMAIN (UNP RESIDUES 330-526); COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: ANTIBODY S309 LIGHT CHAIN; COMPND 12 CHAIN: C; COMPND 13 ENGINEERED: YES; COMPND 14 MOL_ID: 4; COMPND 15 MOLECULE: ANTIBODY S309 HEAVY CHAIN; COMPND 16 CHAIN: D; COMPND 17 ENGINEERED: YES; COMPND 18 MOL_ID: 5; COMPND 19 MOLECULE: ANTIBODY CR3022 HEAVY CHAIN; COMPND 20 CHAIN: H; COMPND 21 ENGINEERED: YES; COMPND 22 MOL_ID: 6; COMPND 23 MOLECULE: ANTIBODY CR3022 LIGHT CHAIN; COMPND 24 CHAIN: L; COMPND 25 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: ESCHERICHIA PHAGE ECSZW-2; SOURCE 4 ORGANISM_TAXID: 2419741; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 7 2; SOURCE 8 ORGANISM_COMMON: 2019-NCOV, SARS-COV-2; SOURCE 9 ORGANISM_TAXID: 2697049; SOURCE 10 GENE: S, 2; SOURCE 11 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 12 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 14 EXPRESSION_SYSTEM_CELL_LINE: 293 FREESTYLE; SOURCE 15 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 16 EXPRESSION_SYSTEM_PLASMID: PVRC8400; SOURCE 17 MOL_ID: 3; SOURCE 18 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 19 ORGANISM_COMMON: HUMAN; SOURCE 20 ORGANISM_TAXID: 9606; SOURCE 21 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 22 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 23 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 24 EXPRESSION_SYSTEM_CELL_LINE: 293 FREESTYLE; SOURCE 25 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 26 EXPRESSION_SYSTEM_PLASMID: PVRC8400; SOURCE 27 MOL_ID: 4; SOURCE 28 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 29 ORGANISM_COMMON: HUMAN; SOURCE 30 ORGANISM_TAXID: 9606; SOURCE 31 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 32 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 33 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 34 EXPRESSION_SYSTEM_CELL_LINE: 293 FREESTYLE; SOURCE 35 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 36 EXPRESSION_SYSTEM_PLASMID: PVRC8400; SOURCE 37 MOL_ID: 5; SOURCE 38 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 39 ORGANISM_COMMON: HUMAN; SOURCE 40 ORGANISM_TAXID: 9606; SOURCE 41 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 42 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 43 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 44 EXPRESSION_SYSTEM_CELL_LINE: 293 FREESTYLE; SOURCE 45 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 46 EXPRESSION_SYSTEM_PLASMID: PVRC8400; SOURCE 47 MOL_ID: 6; SOURCE 48 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 49 ORGANISM_COMMON: HUMAN; SOURCE 50 ORGANISM_TAXID: 9606; SOURCE 51 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 52 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 53 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 54 EXPRESSION_SYSTEM_CELL_LINE: 293 FREESTYLE; SOURCE 55 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 56 EXPRESSION_SYSTEM_PLASMID: PVRC8400 KEYWDS DARPINS, ANTI-SARS-COV-2, THERAPEUTICS, COVID-19, VIRAL PROTEIN- KEYWDS 2 IMMUNE SYSTEM COMPLEX EXPDTA ELECTRON MICROSCOPY AUTHOR Y.D.KWON,J.GORMAN,P.D.KWONG REVDAT 2 15-MAR-23 8DW2 1 JRNL REVDAT 1 07-DEC-22 8DW2 0 JRNL AUTH V.CHONIRA,Y.D.KWON,J.GORMAN,J.B.CASE,Z.KU,R.SIMEON, JRNL AUTH 2 R.G.CASNER,D.R.HARRIS,A.S.OLIA,T.STEPHENS,L.SHAPIRO, JRNL AUTH 3 M.F.BENDER,H.BOYD,I.T.TENG,Y.TSYBOVSKY,F.KRAMMER,N.ZHANG, JRNL AUTH 4 M.S.DIAMOND,P.D.KWONG,Z.AN,Z.CHEN JRNL TITL A POTENT AND BROAD NEUTRALIZATION OF SARS-COV-2 VARIANTS OF JRNL TITL 2 CONCERN BY DARPINS. JRNL REF NAT.CHEM.BIOL. V. 19 284 2023 JRNL REFN ESSN 1552-4469 JRNL PMID 36411391 JRNL DOI 10.1038/S41589-022-01193-2 REMARK 2 REMARK 2 RESOLUTION. 4.11 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : CRYOSPARC, CRYOSPARC, UCSF CHIMERA, REMARK 3 PHENIX, CRYOSPARC, CRYOSPARC REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : 7BNO REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : RIGID BODY FIT REMARK 3 REFINEMENT TARGET : CC REMARK 3 OVERALL ANISOTROPIC B VALUE : 134.000 REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 4.110 REMARK 3 NUMBER OF PARTICLES : 101417 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 8DW2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-AUG-22. REMARK 100 THE DEPOSITION ID IS D_1000267465. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : DARPIN SR22 IN COMPLEX WITH REMARK 245 SARS-COV-2 RBD AND ANTIBODY REMARK 245 FABS, S309 AND CR3022 REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 1.00 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.40 REMARK 245 SAMPLE DETAILS : DARPIN SR22 IN COMPLEX WITH REMARK 245 SARS-COV-2 RBD AND ANTIBODY FABS, S309 AND CR3022 REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 BIOQUANTUM (6K X REMARK 245 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1250.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2500.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.70 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 4020.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, H, L, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO B 330 REMARK 465 ASN B 331 REMARK 465 ILE B 332 REMARK 465 THR B 333 REMARK 465 ASN B 334 REMARK 465 CYS C 214 REMARK 465 SER D 229 REMARK 465 CYS D 230 REMARK 465 LYS H 133 REMARK 465 SER H 134 REMARK 465 THR H 135 REMARK 465 SER H 136 REMARK 465 CYS H 220 REMARK 465 CYS L 220 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O TYR C 186 OH TYR C 192 2.13 REMARK 500 OG SER B 514 OE2 GLU B 516 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 156 1.04 -64.48 REMARK 500 PRO B 337 73.73 -69.90 REMARK 500 ASN B 360 63.60 60.59 REMARK 500 ALA B 372 18.66 58.28 REMARK 500 ASP B 428 58.70 33.97 REMARK 500 CYS B 432 117.74 -160.98 REMARK 500 ASP B 442 57.47 -94.74 REMARK 500 PRO B 521 -174.85 -65.21 REMARK 500 SER C 7 137.72 63.26 REMARK 500 ALA C 52 -5.83 68.00 REMARK 500 SER C 68 -177.79 -170.06 REMARK 500 SER C 77 -74.00 65.01 REMARK 500 HIS C 92 26.80 -141.01 REMARK 500 SER C 95 -133.90 52.20 REMARK 500 PRO C 141 -159.12 -91.89 REMARK 500 ASN C 158 11.74 -140.05 REMARK 500 SER C 171 63.22 60.40 REMARK 500 ALA D 92 -167.08 -162.91 REMARK 500 LEU D 110 -168.11 -125.48 REMARK 500 ASN D 218 55.52 30.97 REMARK 500 ASP H 148 62.77 62.54 REMARK 500 PHE H 150 142.41 -172.21 REMARK 500 PRO H 151 -175.28 -69.17 REMARK 500 SER H 192 33.91 -96.54 REMARK 500 ASN H 208 43.85 39.52 REMARK 500 SER L 14 -179.20 -66.61 REMARK 500 GLU L 17 -169.96 -125.04 REMARK 500 TRP L 56 18.70 58.91 REMARK 500 ALA L 57 -5.70 68.40 REMARK 500 ASP L 176 25.63 -143.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 CYS B 361 VAL B 362 148.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-27749 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-27750 RELATED DB: EMDB DBREF 8DW2 A 15 169 PDB 8DW2 8DW2 15 169 DBREF 8DW2 B 330 526 UNP P0DTC2 SPIKE_SARS2 330 526 DBREF 8DW2 C 1 214 PDB 8DW2 8DW2 1 214 DBREF 8DW2 D 1 230 PDB 8DW2 8DW2 1 230 DBREF 8DW2 H 0 220 PDB 8DW2 8DW2 0 220 DBREF 8DW2 L 1 220 PDB 8DW2 8DW2 1 220 SEQRES 1 A 155 GLY LYS LYS LEU LEU GLU ALA ALA ARG ALA GLY GLN ASP SEQRES 2 A 155 ASP GLU VAL ARG ILE LEU MET ALA ASN GLY ALA ASP VAL SEQRES 3 A 155 ASN ALA CYS ASP PRO SER GLY ILE THR PRO LEU HIS LEU SEQRES 4 A 155 ALA ALA ASP LYS GLY HIS LEU GLU ILE VAL GLU VAL LEU SEQRES 5 A 155 LEU LYS TYR GLY ALA ASP VAL ASN ALA MET ASP VAL TRP SEQRES 6 A 155 GLY ARG THR PRO LEU HIS LEU ALA ALA PHE THR GLY HIS SEQRES 7 A 155 LEU GLU ILE VAL GLU VAL LEU LEU LYS TYR GLY ALA ASP SEQRES 8 A 155 VAL ASN ALA CYS ASP LEU ASN GLY TYR THR PRO LEU HIS SEQRES 9 A 155 LEU ALA ALA GLY ARG GLY HIS LEU GLU ILE VAL GLU VAL SEQRES 10 A 155 LEU LEU LYS ASN GLY ALA GLY VAL ASN ALA GLN ASP LYS SEQRES 11 A 155 PHE GLY LYS THR ALA PHE ASP ILE SER ILE ASP ASN GLY SEQRES 12 A 155 ASN GLU ASP LEU ALA GLU ILE LEU GLN SER SER SER SEQRES 1 B 197 PRO ASN ILE THR ASN LEU CYS PRO PHE GLY GLU VAL PHE SEQRES 2 B 197 ASN ALA THR ARG PHE ALA SER VAL TYR ALA TRP ASN ARG SEQRES 3 B 197 LYS ARG ILE SER ASN CYS VAL ALA ASP TYR SER VAL LEU SEQRES 4 B 197 TYR ASN SER ALA SER PHE SER THR PHE LYS CYS TYR GLY SEQRES 5 B 197 VAL SER PRO THR LYS LEU ASN ASP LEU CYS PHE THR ASN SEQRES 6 B 197 VAL TYR ALA ASP SER PHE VAL ILE ARG GLY ASP GLU VAL SEQRES 7 B 197 ARG GLN ILE ALA PRO GLY GLN THR GLY LYS ILE ALA ASP SEQRES 8 B 197 TYR ASN TYR LYS LEU PRO ASP ASP PHE THR GLY CYS VAL SEQRES 9 B 197 ILE ALA TRP ASN SER ASN ASN LEU ASP SER LYS VAL GLY SEQRES 10 B 197 GLY ASN TYR ASN TYR LEU TYR ARG LEU PHE ARG LYS SER SEQRES 11 B 197 ASN LEU LYS PRO PHE GLU ARG ASP ILE SER THR GLU ILE SEQRES 12 B 197 TYR GLN ALA GLY SER THR PRO CYS ASN GLY VAL GLU GLY SEQRES 13 B 197 PHE ASN CYS TYR PHE PRO LEU GLN SER TYR GLY PHE GLN SEQRES 14 B 197 PRO THR ASN GLY VAL GLY TYR GLN PRO TYR ARG VAL VAL SEQRES 15 B 197 VAL LEU SER PHE GLU LEU LEU HIS ALA PRO ALA THR VAL SEQRES 16 B 197 CYS GLY SEQRES 1 C 214 GLU ILE VAL LEU THR GLN SER PRO GLY THR LEU SER LEU SEQRES 2 C 214 SER PRO GLY GLU ARG ALA THR LEU SER CYS ARG ALA SER SEQRES 3 C 214 GLN THR VAL SER SER THR SER LEU ALA TRP TYR GLN GLN SEQRES 4 C 214 LYS PRO GLY GLN ALA PRO ARG LEU LEU ILE TYR GLY ALA SEQRES 5 C 214 SER SER ARG ALA THR GLY ILE PRO ASP ARG PHE SER GLY SEQRES 6 C 214 SER GLY SER GLY THR ASP PHE THR LEU THR ILE SER ARG SEQRES 7 C 214 LEU GLU PRO GLU ASP PHE ALA VAL TYR TYR CYS GLN GLN SEQRES 8 C 214 HIS ASP THR SER LEU THR PHE GLY GLY GLY THR LYS VAL SEQRES 9 C 214 GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE ILE SEQRES 10 C 214 PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR ALA SEQRES 11 C 214 SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG GLU SEQRES 12 C 214 ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SER SEQRES 13 C 214 GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER LYS SEQRES 14 C 214 ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SER SEQRES 15 C 214 LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS GLU SEQRES 16 C 214 VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SER SEQRES 17 C 214 PHE ASN ARG GLY GLU CYS SEQRES 1 D 230 GLN VAL GLN LEU VAL GLN SER GLY ALA GLU VAL LYS LYS SEQRES 2 D 230 PRO GLY ALA SER VAL LYS VAL SER CYS LYS ALA SER GLY SEQRES 3 D 230 TYR PRO PHE THR SER TYR GLY ILE SER TRP VAL ARG GLN SEQRES 4 D 230 ALA PRO GLY GLN GLY LEU GLU TRP MET GLY TRP ILE SER SEQRES 5 D 230 THR TYR ASN GLY ASN THR ASN TYR ALA GLN LYS PHE GLN SEQRES 6 D 230 GLY ARG VAL THR MET THR THR ASP THR SER THR THR THR SEQRES 7 D 230 GLY TYR MET GLU LEU ARG ARG LEU ARG SER ASP ASP THR SEQRES 8 D 230 ALA VAL TYR TYR CYS ALA ARG ASP TYR THR ARG GLY ALA SEQRES 9 D 230 TRP PHE GLY GLU SER LEU ILE GLY GLY PHE ASP ASN TRP SEQRES 10 D 230 GLY GLN GLY THR LEU VAL THR VAL SER SER ALA SER THR SEQRES 11 D 230 LYS GLY PRO SER VAL PHE PRO LEU ALA PRO SER SER LYS SEQRES 12 D 230 SER THR SER GLY GLY THR ALA ALA LEU GLY CYS LEU VAL SEQRES 13 D 230 LYS ASP TYR PHE PRO GLU PRO VAL THR VAL SER TRP ASN SEQRES 14 D 230 SER GLY ALA LEU THR SER GLY VAL HIS THR PHE PRO ALA SEQRES 15 D 230 VAL LEU GLN SER SER GLY LEU TYR SER LEU SER SER VAL SEQRES 16 D 230 VAL THR VAL PRO SER SER SER LEU GLY THR GLN THR TYR SEQRES 17 D 230 ILE CYS ASN VAL ASN HIS LYS PRO SER ASN THR LYS VAL SEQRES 18 D 230 ASP LYS LYS VAL GLU PRO LYS SER CYS SEQRES 1 H 221 THR GLN MET GLN LEU VAL GLN SER GLY THR GLU VAL LYS SEQRES 2 H 221 LYS PRO GLY GLU SER LEU LYS ILE SER CYS LYS GLY SER SEQRES 3 H 221 GLY TYR GLY PHE ILE THR TYR TRP ILE GLY TRP VAL ARG SEQRES 4 H 221 GLN MET PRO GLY LYS GLY LEU GLU TRP MET GLY ILE ILE SEQRES 5 H 221 TYR PRO GLY ASP SER GLU THR ARG TYR SER PRO SER PHE SEQRES 6 H 221 GLN GLY GLN VAL THR ILE SER ALA ASP LYS SER ILE ASN SEQRES 7 H 221 THR ALA TYR LEU GLN TRP SER SER LEU LYS ALA SER ASP SEQRES 8 H 221 THR ALA ILE TYR TYR CYS ALA GLY GLY SER GLY ILE SER SEQRES 9 H 221 THR PRO MET ASP VAL TRP GLY GLN GLY THR THR VAL THR SEQRES 10 H 221 VAL ALA SER THR LYS GLY PRO SER VAL PHE PRO LEU ALA SEQRES 11 H 221 PRO SER SER LYS SER THR SER GLY GLY THR ALA ALA LEU SEQRES 12 H 221 GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL THR SEQRES 13 H 221 VAL SER TRP ASN SER GLY ALA LEU THR SER GLY VAL HIS SEQRES 14 H 221 THR PHE PRO ALA VAL LEU GLN SER SER GLY LEU TYR SER SEQRES 15 H 221 LEU SER SER VAL VAL THR VAL PRO SER SER SER LEU GLY SEQRES 16 H 221 THR GLN THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SER SEQRES 17 H 221 ASN THR LYS VAL ASP LYS LYS VAL GLU PRO LYS SER CYS SEQRES 1 L 220 ASP ILE GLN LEU THR GLN SER PRO ASP SER LEU ALA VAL SEQRES 2 L 220 SER LEU GLY GLU ARG ALA THR ILE ASN CYS LYS SER SER SEQRES 3 L 220 GLN SER VAL LEU TYR SER SER ILE ASN LYS ASN TYR LEU SEQRES 4 L 220 ALA TRP TYR GLN GLN LYS PRO GLY GLN PRO PRO LYS LEU SEQRES 5 L 220 LEU ILE TYR TRP ALA SER THR ARG GLU SER GLY VAL PRO SEQRES 6 L 220 ASP ARG PHE SER GLY SER GLY SER GLY THR ASP PHE THR SEQRES 7 L 220 LEU THR ILE SER SER LEU GLN ALA GLU ASP VAL ALA VAL SEQRES 8 L 220 TYR TYR CYS GLN GLN TYR TYR SER THR PRO TYR THR PHE SEQRES 9 L 220 GLY GLN GLY THR LYS VAL GLU ILE LYS ARG THR VAL ALA SEQRES 10 L 220 ALA PRO SER VAL PHE ILE PHE PRO PRO SER ASP GLU GLN SEQRES 11 L 220 LEU LYS SER GLY THR ALA SER VAL VAL CYS LEU LEU ASN SEQRES 12 L 220 ASN PHE TYR PRO ARG GLU ALA LYS VAL GLN TRP LYS VAL SEQRES 13 L 220 ASP ASN ALA LEU GLN SER GLY ASN SER GLN GLU SER VAL SEQRES 14 L 220 THR GLU GLN ASP SER LYS ASP SER THR TYR SER LEU SER SEQRES 15 L 220 SER THR LEU THR LEU SER LYS ALA ASP TYR GLU LYS HIS SEQRES 16 L 220 LYS VAL TYR ALA CYS GLU VAL THR HIS GLN GLY LEU SER SEQRES 17 L 220 SER PRO VAL THR LYS SER PHE ASN ARG GLY GLU CYS HET NAG E 1 14 HET NAG E 2 14 HET BMA E 3 11 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 7 NAG 2(C8 H15 N O6) FORMUL 7 BMA C6 H12 O6 HELIX 1 AA1 LYS A 16 GLY A 25 1 10 HELIX 2 AA2 GLN A 26 ASN A 36 1 11 HELIX 3 AA3 THR A 49 GLY A 58 1 10 HELIX 4 AA4 HIS A 59 TYR A 69 1 11 HELIX 5 AA5 THR A 82 GLY A 91 1 10 HELIX 6 AA6 HIS A 92 GLY A 103 1 12 HELIX 7 AA7 THR A 115 ARG A 123 1 9 HELIX 8 AA8 LEU A 126 ASN A 135 1 10 HELIX 9 AA9 THR A 148 ASN A 156 1 9 HELIX 10 AB1 LEU A 161 SER A 168 1 8 HELIX 11 AB2 PRO B 337 ASN B 343 1 7 HELIX 12 AB3 SER B 349 TRP B 353 5 5 HELIX 13 AB4 TYR B 365 ASN B 370 1 6 HELIX 14 AB5 ASP B 405 ILE B 410 5 6 HELIX 15 AB6 GLY B 416 ASN B 422 1 7 HELIX 16 AB7 SER C 121 LYS C 126 1 6 HELIX 17 AB8 LYS C 183 GLU C 187 1 5 HELIX 18 AB9 ARG D 87 THR D 91 5 5 HELIX 19 AC1 SER D 201 LEU D 203 5 3 HELIX 20 AC2 GLY H 28 TYR H 32 5 5 HELIX 21 AC3 GLN L 85 VAL L 89 5 5 HELIX 22 AC4 SER L 127 GLY L 134 1 8 HELIX 23 AC5 LYS L 189 LYS L 194 1 6 SHEET 1 AA1 5 ASN B 354 LYS B 356 0 SHEET 2 AA1 5 ALA B 397 ARG B 403 -1 O SER B 399 N ASN B 354 SHEET 3 AA1 5 PRO B 507 SER B 514 -1 O VAL B 510 N PHE B 400 SHEET 4 AA1 5 GLY B 431 ASN B 437 -1 N ILE B 434 O VAL B 511 SHEET 5 AA1 5 LYS B 378 CYS B 379 -1 N LYS B 378 O VAL B 433 SHEET 1 AA2 2 LEU B 452 TYR B 453 0 SHEET 2 AA2 2 GLN B 493 SER B 494 -1 O GLN B 493 N TYR B 453 SHEET 1 AA3 2 TYR B 473 GLN B 474 0 SHEET 2 AA3 2 CYS B 488 TYR B 489 -1 O TYR B 489 N TYR B 473 SHEET 1 AA4 4 LEU C 4 THR C 5 0 SHEET 2 AA4 4 THR C 20 ALA C 25 -1 O ARG C 24 N THR C 5 SHEET 3 AA4 4 ASP C 71 THR C 75 -1 O PHE C 72 N CYS C 23 SHEET 4 AA4 4 SER C 64 SER C 68 -1 N SER C 66 O THR C 73 SHEET 1 AA5 5 SER C 54 ARG C 55 0 SHEET 2 AA5 5 PRO C 45 TYR C 50 -1 N TYR C 50 O SER C 54 SHEET 3 AA5 5 LEU C 34 GLN C 39 -1 N TRP C 36 O ILE C 49 SHEET 4 AA5 5 VAL C 86 GLN C 91 -1 O GLN C 90 N ALA C 35 SHEET 5 AA5 5 THR C 97 PHE C 98 -1 O THR C 97 N GLN C 91 SHEET 1 AA6 5 SER C 54 ARG C 55 0 SHEET 2 AA6 5 PRO C 45 TYR C 50 -1 N TYR C 50 O SER C 54 SHEET 3 AA6 5 LEU C 34 GLN C 39 -1 N TRP C 36 O ILE C 49 SHEET 4 AA6 5 VAL C 86 GLN C 91 -1 O GLN C 90 N ALA C 35 SHEET 5 AA6 5 THR C 102 LYS C 103 -1 O THR C 102 N TYR C 87 SHEET 1 AA7 4 SER C 114 PHE C 118 0 SHEET 2 AA7 4 THR C 129 PHE C 139 -1 O VAL C 133 N PHE C 118 SHEET 3 AA7 4 TYR C 173 SER C 182 -1 O SER C 177 N CYS C 134 SHEET 4 AA7 4 SER C 159 VAL C 163 -1 N GLN C 160 O THR C 178 SHEET 1 AA8 3 LYS C 145 VAL C 150 0 SHEET 2 AA8 3 VAL C 191 THR C 197 -1 O GLU C 195 N GLN C 147 SHEET 3 AA8 3 VAL C 205 ASN C 210 -1 O LYS C 207 N CYS C 194 SHEET 1 AA9 4 GLN D 3 GLN D 6 0 SHEET 2 AA9 4 VAL D 18 SER D 25 -1 O LYS D 23 N VAL D 5 SHEET 3 AA9 4 THR D 78 LEU D 83 -1 O LEU D 83 N VAL D 18 SHEET 4 AA9 4 VAL D 68 ASP D 73 -1 N THR D 71 O TYR D 80 SHEET 1 AB1 6 GLU D 10 LYS D 12 0 SHEET 2 AB1 6 THR D 121 VAL D 125 1 O LEU D 122 N GLU D 10 SHEET 3 AB1 6 ALA D 92 ARG D 98 -1 N ALA D 92 O VAL D 123 SHEET 4 AB1 6 ILE D 34 GLN D 39 -1 N SER D 35 O ALA D 97 SHEET 5 AB1 6 LEU D 45 ILE D 51 -1 O GLY D 49 N TRP D 36 SHEET 6 AB1 6 THR D 58 TYR D 60 -1 O ASN D 59 N TRP D 50 SHEET 1 AB2 4 SER D 134 LEU D 138 0 SHEET 2 AB2 4 THR D 149 LYS D 157 -1 O LEU D 155 N PHE D 136 SHEET 3 AB2 4 SER D 191 PRO D 199 -1 O LEU D 192 N VAL D 156 SHEET 4 AB2 4 VAL D 177 THR D 179 -1 N HIS D 178 O VAL D 195 SHEET 1 AB3 3 THR D 165 TRP D 168 0 SHEET 2 AB3 3 ILE D 209 HIS D 214 -1 O ASN D 213 N THR D 165 SHEET 3 AB3 3 THR D 219 LYS D 224 -1 O LYS D 223 N CYS D 210 SHEET 1 AB4 4 MET H 2 GLN H 6 0 SHEET 2 AB4 4 LEU H 18 GLY H 26 -1 O SER H 25 N GLN H 3 SHEET 3 AB4 4 THR H 78 TRP H 83 -1 O LEU H 81 N ILE H 20 SHEET 4 AB4 4 VAL H 68 ASP H 73 -1 N SER H 71 O TYR H 80 SHEET 1 AB5 5 THR H 58 TYR H 60 0 SHEET 2 AB5 5 LEU H 45 ILE H 51 -1 N ILE H 50 O ARG H 59 SHEET 3 AB5 5 TRP H 33 GLN H 39 -1 N ILE H 34 O ILE H 51 SHEET 4 AB5 5 ALA H 92 GLY H 99 -1 O ALA H 97 N GLY H 35 SHEET 5 AB5 5 VAL H 108 TRP H 109 -1 O VAL H 108 N GLY H 98 SHEET 1 AB6 5 THR H 58 TYR H 60 0 SHEET 2 AB6 5 LEU H 45 ILE H 51 -1 N ILE H 50 O ARG H 59 SHEET 3 AB6 5 TRP H 33 GLN H 39 -1 N ILE H 34 O ILE H 51 SHEET 4 AB6 5 ALA H 92 GLY H 99 -1 O ALA H 97 N GLY H 35 SHEET 5 AB6 5 THR H 113 VAL H 115 -1 O THR H 113 N TYR H 94 SHEET 1 AB7 4 SER H 124 LEU H 128 0 SHEET 2 AB7 4 THR H 139 TYR H 149 -1 O LEU H 145 N PHE H 126 SHEET 3 AB7 4 TYR H 180 PRO H 189 -1 O LEU H 182 N VAL H 146 SHEET 4 AB7 4 HIS H 168 THR H 169 -1 N HIS H 168 O VAL H 185 SHEET 1 AB8 4 SER H 124 LEU H 128 0 SHEET 2 AB8 4 THR H 139 TYR H 149 -1 O LEU H 145 N PHE H 126 SHEET 3 AB8 4 TYR H 180 PRO H 189 -1 O LEU H 182 N VAL H 146 SHEET 4 AB8 4 VAL H 173 LEU H 174 -1 N VAL H 173 O SER H 181 SHEET 1 AB9 3 VAL H 154 TRP H 158 0 SHEET 2 AB9 3 TYR H 198 HIS H 204 -1 O ASN H 201 N SER H 157 SHEET 3 AB9 3 THR H 209 VAL H 215 -1 O VAL H 211 N VAL H 202 SHEET 1 AC1 4 LEU L 4 SER L 7 0 SHEET 2 AC1 4 ALA L 19 SER L 25 -1 O ASN L 22 N SER L 7 SHEET 3 AC1 4 ASP L 76 ILE L 81 -1 O LEU L 79 N ILE L 21 SHEET 4 AC1 4 PHE L 68 SER L 73 -1 N SER L 71 O THR L 78 SHEET 1 AC2 5 THR L 59 ARG L 60 0 SHEET 2 AC2 5 LYS L 51 TYR L 55 -1 N TYR L 55 O THR L 59 SHEET 3 AC2 5 LEU L 39 GLN L 44 -1 N GLN L 43 O LYS L 51 SHEET 4 AC2 5 VAL L 91 GLN L 96 -1 O TYR L 93 N TYR L 42 SHEET 5 AC2 5 THR L 108 LYS L 109 -1 O THR L 108 N TYR L 92 SHEET 1 AC3 4 SER L 120 PHE L 124 0 SHEET 2 AC3 4 THR L 135 PHE L 145 -1 O LEU L 141 N PHE L 122 SHEET 3 AC3 4 TYR L 179 SER L 188 -1 O LEU L 181 N LEU L 142 SHEET 4 AC3 4 SER L 165 VAL L 169 -1 N SER L 168 O SER L 182 SHEET 1 AC4 3 ALA L 150 VAL L 156 0 SHEET 2 AC4 3 VAL L 197 HIS L 204 -1 O ALA L 199 N LYS L 155 SHEET 3 AC4 3 VAL L 211 ASN L 216 -1 O PHE L 215 N TYR L 198 SSBOND 1 CYS B 336 CYS B 361 1555 1555 2.03 SSBOND 2 CYS B 379 CYS B 432 1555 1555 2.03 SSBOND 3 CYS B 391 CYS B 525 1555 1555 2.03 SSBOND 4 CYS B 480 CYS B 488 1555 1555 2.03 SSBOND 5 CYS C 23 CYS C 89 1555 1555 2.04 SSBOND 6 CYS C 134 CYS C 194 1555 1555 2.04 SSBOND 7 CYS D 22 CYS D 96 1555 1555 2.04 SSBOND 8 CYS D 154 CYS D 210 1555 1555 2.04 SSBOND 9 CYS H 22 CYS H 96 1555 1555 2.03 SSBOND 10 CYS H 144 CYS H 200 1555 1555 2.03 SSBOND 11 CYS L 23 CYS L 94 1555 1555 2.04 SSBOND 12 CYS L 140 CYS L 200 1555 1555 2.03 LINK ND2 ASN B 343 C1 NAG E 1 1555 1555 1.44 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.44 LINK O4 NAG E 2 C1 BMA E 3 1555 1555 1.45 CISPEP 1 SER C 7 PRO C 8 0 -6.38 CISPEP 2 TYR C 140 PRO C 141 0 -7.03 CISPEP 3 PHE D 160 PRO D 161 0 -8.86 CISPEP 4 GLU D 162 PRO D 163 0 5.09 CISPEP 5 PHE H 150 PRO H 151 0 -8.06 CISPEP 6 GLU H 152 PRO H 153 0 -4.76 CISPEP 7 SER L 7 PRO L 8 0 -1.04 CISPEP 8 THR L 100 PRO L 101 0 -2.69 CISPEP 9 TYR L 146 PRO L 147 0 3.88 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000