HEADER HYDROLASE/DNA 01-AUG-22 8DWE TITLE ADENINE GLYCOSYLASE MUTY VARIANT E43Q IN COMPLEX WITH DNA CONTAINING TITLE 2 D(8-OXO-G) PAIRED WITH SUBSTRATE PURINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ADENINE DNA GLYCOSYLASE; COMPND 3 CHAIN: A, D; COMPND 4 SYNONYM: OXOG:A-SPECIFIC ADENINE GLYCOSYLASE; COMPND 5 EC: 3.2.2.31; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: DNA (5'-D(*AP*AP*GP*AP*CP*(8OG)P*TP*GP*GP*AP*C)-3'); COMPND 10 CHAIN: B, E; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: DNA (5'-D(*TP*GP*TP*CP*CP*AP*(PRN)P*GP*TP*CP*T)-3'); COMPND 14 CHAIN: C, F; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GEOBACILLUS STEAROTHERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 1422; SOURCE 4 GENE: MUTY; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 11 ORGANISM_TAXID: 32630; SOURCE 12 MOL_ID: 3; SOURCE 13 SYNTHETIC: YES; SOURCE 14 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 15 ORGANISM_TAXID: 32630 KEYWDS PROTEIN-DNA COMPLEX, DNA REPAIR, BASE EXCISION REPAIR, HYDROLASE, KEYWDS 2 HYDROLASE-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR L.P.RUSSELBURG,M.DEMIR,S.S.DAVID,M.P.HORVATH REVDAT 2 22-MAY-24 8DWE 1 REMARK REVDAT 1 09-AUG-23 8DWE 0 JRNL AUTH L.P.RUSSELBURG,M.DEMIR,K.CEDENO,S.S.DAVID,M.P.HORVATH JRNL TITL STRUCTURAL BASIS FOR BASE ENGAGEMENT AND STEREOCHEMISTRY JRNL TITL 2 REVEALED BY ALTERATION OF CATALYTIC RESIDUE GLU43 IN DNA JRNL TITL 3 REPAIR GLYCOSYLASE MUTY JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 73.12 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 96236 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.192 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.530 REMARK 3 FREE R VALUE TEST SET COUNT : 2438 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 73.1200 - 5.6600 0.99 5501 132 0.1787 0.2045 REMARK 3 2 5.6600 - 4.4900 1.00 5496 155 0.1494 0.1894 REMARK 3 3 4.4900 - 3.9200 1.00 5527 139 0.1462 0.1659 REMARK 3 4 3.9200 - 3.5600 1.00 5508 170 0.1657 0.2323 REMARK 3 5 3.5600 - 3.3100 0.99 5524 137 0.1770 0.2761 REMARK 3 6 3.3100 - 3.1100 1.00 5481 137 0.1948 0.2691 REMARK 3 7 3.1100 - 2.9600 1.00 5529 147 0.2021 0.2628 REMARK 3 8 2.9600 - 2.8300 1.00 5502 151 0.2249 0.2501 REMARK 3 9 2.8300 - 2.7200 1.00 5526 153 0.2331 0.2620 REMARK 3 10 2.7200 - 2.6300 1.00 5553 154 0.2358 0.2880 REMARK 3 11 2.6300 - 2.5400 1.00 5503 122 0.2426 0.2824 REMARK 3 12 2.5400 - 2.4700 1.00 5553 138 0.2489 0.3050 REMARK 3 13 2.4700 - 2.4100 1.00 5502 147 0.2649 0.2614 REMARK 3 14 2.4100 - 2.3500 1.00 5531 148 0.2811 0.3001 REMARK 3 15 2.3500 - 2.2900 1.00 5565 123 0.3101 0.3938 REMARK 3 16 2.2900 - 2.2400 1.00 5474 144 0.3174 0.3452 REMARK 3 17 2.2400 - 2.2000 0.99 5523 141 0.3359 0.3694 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.339 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.622 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 48.18 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 59.79 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.013 6653 REMARK 3 ANGLE : 1.164 9249 REMARK 3 CHIRALITY : 0.057 1025 REMARK 3 PLANARITY : 0.011 1038 REMARK 3 DIHEDRAL : 18.735 2469 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND (RESID 5:228 OR RESID 401 OR RESID REMARK 3 403)) REMARK 3 ORIGIN FOR THE GROUP (A): 2.6835 6.4972 6.3555 REMARK 3 T TENSOR REMARK 3 T11: 0.3604 T22: 0.4044 REMARK 3 T33: 0.4494 T12: -0.0059 REMARK 3 T13: -0.0071 T23: 0.0311 REMARK 3 L TENSOR REMARK 3 L11: 0.6208 L22: 0.7203 REMARK 3 L33: 1.3284 L12: -0.2041 REMARK 3 L13: -0.1735 L23: -0.1614 REMARK 3 S TENSOR REMARK 3 S11: -0.0023 S12: -0.0168 S13: 0.0462 REMARK 3 S21: -0.0282 S22: 0.0118 S23: 0.0629 REMARK 3 S31: 0.1275 S32: -0.0835 S33: 0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND (RESID 229:359 OR RESID 404)) REMARK 3 ORIGIN FOR THE GROUP (A): 24.4989 -1.8878 34.7196 REMARK 3 T TENSOR REMARK 3 T11: 0.6451 T22: 0.5957 REMARK 3 T33: 0.5548 T12: 0.0780 REMARK 3 T13: -0.1492 T23: 0.0098 REMARK 3 L TENSOR REMARK 3 L11: 0.4166 L22: 0.6035 REMARK 3 L33: 0.4951 L12: -0.0668 REMARK 3 L13: -0.0427 L23: 0.0754 REMARK 3 S TENSOR REMARK 3 S11: 0.0990 S12: -0.1590 S13: 0.0097 REMARK 3 S21: 0.3017 S22: 0.1447 S23: -0.1785 REMARK 3 S31: 0.1659 S32: 0.1791 S33: 0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN D AND (RESID 4:228 OR RESID 401 OR RESID REMARK 3 403)) REMARK 3 ORIGIN FOR THE GROUP (A): 21.6974 -42.0474 6.6598 REMARK 3 T TENSOR REMARK 3 T11: 0.3717 T22: 0.4092 REMARK 3 T33: 0.4008 T12: -0.0189 REMARK 3 T13: -0.0032 T23: -0.0200 REMARK 3 L TENSOR REMARK 3 L11: 0.9226 L22: 0.8552 REMARK 3 L33: 1.4472 L12: -0.1525 REMARK 3 L13: 0.0058 L23: -0.3486 REMARK 3 S TENSOR REMARK 3 S11: 0.0512 S12: 0.0119 S13: -0.0824 REMARK 3 S21: 0.0416 S22: -0.0126 S23: -0.0893 REMARK 3 S31: -0.0669 S32: 0.0668 S33: 0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN D AND (RESID 229:360 OR RESID 404)) REMARK 3 ORIGIN FOR THE GROUP (A): -1.1163 -33.2691 33.6290 REMARK 3 T TENSOR REMARK 3 T11: 0.6874 T22: 0.6464 REMARK 3 T33: 0.4558 T12: 0.0270 REMARK 3 T13: 0.1310 T23: -0.0116 REMARK 3 L TENSOR REMARK 3 L11: 0.5291 L22: 0.5947 REMARK 3 L33: 0.6615 L12: -0.2898 REMARK 3 L13: -0.0547 L23: -0.3351 REMARK 3 S TENSOR REMARK 3 S11: -0.0133 S12: -0.3103 S13: 0.0550 REMARK 3 S21: 0.4162 S22: 0.0609 S23: 0.2002 REMARK 3 S31: -0.1384 S32: -0.3109 S33: 0.0001 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: ((CHAIN B AND RESID 1:11) OR (CHAIN C AND RESID REMARK 3 12:22)) REMARK 3 ORIGIN FOR THE GROUP (A): 15.9387 -0.3053 11.7381 REMARK 3 T TENSOR REMARK 3 T11: 0.4642 T22: 0.4216 REMARK 3 T33: 0.5054 T12: 0.0377 REMARK 3 T13: -0.0298 T23: 0.0356 REMARK 3 L TENSOR REMARK 3 L11: 0.4110 L22: 0.0538 REMARK 3 L33: 0.0508 L12: 0.0183 REMARK 3 L13: -0.0559 L23: 0.0573 REMARK 3 S TENSOR REMARK 3 S11: 0.2503 S12: 0.0661 S13: -0.0879 REMARK 3 S21: -0.1036 S22: -0.3663 S23: -0.0581 REMARK 3 S31: 0.2600 S32: 0.0577 S33: 0.0000 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: ((CHAIN E AND RESID 1:11) OR (CHAIN F AND RESID REMARK 3 12:22)) REMARK 3 ORIGIN FOR THE GROUP (A): 8.3346 -35.1447 11.5752 REMARK 3 T TENSOR REMARK 3 T11: 0.4764 T22: 0.4339 REMARK 3 T33: 0.4512 T12: 0.0234 REMARK 3 T13: 0.0106 T23: -0.0525 REMARK 3 L TENSOR REMARK 3 L11: 0.7143 L22: 0.0852 REMARK 3 L33: 0.2719 L12: -0.1892 REMARK 3 L13: 0.2019 L23: -0.0681 REMARK 3 S TENSOR REMARK 3 S11: 0.2477 S12: -0.0117 S13: 0.1007 REMARK 3 S21: -0.1713 S22: -0.4054 S23: 0.1620 REMARK 3 S31: -0.3252 S32: -0.0846 S33: 0.0003 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8DWE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-AUG-22. REMARK 100 THE DEPOSITION ID IS D_1000267475. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-DEC-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.11583 REMARK 200 MONOCHROMATOR : WATER-COOLED FLAT DOUBLE SI(111) REMARK 200 KHOZU MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 96293 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 73.120 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.11500 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 5.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.26 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : 1.67500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 0.880 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 6U7T REMARK 200 REMARK 200 REMARK: BROWN, ROD, RECTANGULAR REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.55 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 4000, CALCIUM ACETATE, ETHYLENE REMARK 280 GLYCOL, TRIS.HCL, BETA-MERCAPTOETHANOL, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 68.98000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5920 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18340 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -55.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6110 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18190 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -50.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 ARG A 3 REMARK 465 GLU A 4 REMARK 465 SER A 360 REMARK 465 GLY A 361 REMARK 465 VAL A 362 REMARK 465 ARG A 363 REMARK 465 ARG A 364 REMARK 465 PRO A 365 REMARK 465 MET D 1 REMARK 465 THR D 2 REMARK 465 ARG D 3 REMARK 465 GLN D 289 REMARK 465 TYR D 290 REMARK 465 GLY D 324 REMARK 465 GLY D 325 REMARK 465 PRO D 326 REMARK 465 GLY D 361 REMARK 465 VAL D 362 REMARK 465 ARG D 363 REMARK 465 ARG D 364 REMARK 465 PRO D 365 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 7 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 15 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 27 CG OD1 OD2 REMARK 470 LYS A 32 CD CE NZ REMARK 470 GLU A 52 CG CD OE1 OE2 REMARK 470 GLU A 69 CG CD OE1 OE2 REMARK 470 ASP A 73 CG OD1 OD2 REMARK 470 ASP A 75 CG OD1 OD2 REMARK 470 GLU A 76 CG CD OE1 OE2 REMARK 470 GLU A 78 CG CD OE1 OE2 REMARK 470 LYS A 109 CD CE NZ REMARK 470 ARG A 201 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 219 CG CD OE1 OE2 REMARK 470 GLU A 224 CG CD OE1 OE2 REMARK 470 LYS A 230 CG CD CE NZ REMARK 470 LYS A 231 CG CD CE NZ REMARK 470 ASP A 247 CG OD1 OD2 REMARK 470 GLU A 248 CD OE1 OE2 REMARK 470 GLU A 272 CG CD OE1 OE2 REMARK 470 ASP A 277 CG OD1 OD2 REMARK 470 LYS A 279 CG CD CE NZ REMARK 470 GLU A 280 CG CD OE1 OE2 REMARK 470 GLU A 283 CG CD OE1 OE2 REMARK 470 GLN A 284 CG CD OE1 NE2 REMARK 470 GLU A 288 CG CD OE1 OE2 REMARK 470 GLN A 289 CG CD OE1 NE2 REMARK 470 GLU A 295 CG CD OE1 OE2 REMARK 470 GLU A 298 CG CD OE1 OE2 REMARK 470 GLU A 304 CD OE1 OE2 REMARK 470 ARG A 320 CD NE CZ NH1 NH2 REMARK 470 GLU A 328 CG CD OE1 OE2 REMARK 470 GLU A 338 CG CD OE1 OE2 REMARK 470 DT C 12 O5' C5' C4' O4' C3' C2' C1' REMARK 470 DT C 12 N1 C2 O2 N3 C4 O4 C5 REMARK 470 DT C 12 C7 C6 REMARK 470 GLU D 4 CG CD OE1 OE2 REMARK 470 GLU D 6 CG CD OE1 OE2 REMARK 470 ARG D 7 CD NE CZ NH1 NH2 REMARK 470 LYS D 32 CD CE NZ REMARK 470 GLU D 76 CG CD OE1 OE2 REMARK 470 ASP D 77 CG OD1 OD2 REMARK 470 LYS D 109 CD CE NZ REMARK 470 GLU D 223 CG CD OE1 OE2 REMARK 470 GLU D 224 CG CD OE1 OE2 REMARK 470 MET D 229 SD CE REMARK 470 LYS D 231 CG CD CE NZ REMARK 470 ASP D 247 CG OD1 OD2 REMARK 470 GLU D 248 CG CD OE1 OE2 REMARK 470 ASP D 277 CG OD1 OD2 REMARK 470 GLU D 280 CG CD OE1 OE2 REMARK 470 GLU D 283 CG CD OE1 OE2 REMARK 470 GLN D 284 CG CD OE1 NE2 REMARK 470 GLU D 298 CD OE1 OE2 REMARK 470 ARG D 320 CG CD NE CZ NH1 NH2 REMARK 470 ASP D 337 CG OD1 OD2 REMARK 470 LYS D 340 CG CD CE NZ REMARK 470 DT F 12 O5' C5' C4' O4' C3' C2' C1' REMARK 470 DT F 12 N1 C2 O2 N3 C4 O4 C5 REMARK 470 DT F 12 C7 C6 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HG1 THR A 5 OE1 GLU A 176 1.43 REMARK 500 OE2 GLU D 140 HH22 ARG D 175 1.59 REMARK 500 OP2 DA E 10 O HOH E 201 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE2 GLU A 12 NH2 ARG D 105 2555 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DG B 8 O3' DG B 8 C3' -0.050 REMARK 500 DC C 16 O3' DC C 16 C3' -0.039 REMARK 500 DG E 8 O3' DG E 8 C3' -0.037 REMARK 500 DC F 16 O3' DC F 16 C3' -0.043 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DA B 2 O5' - P - OP2 ANGL. DEV. = -7.5 DEGREES REMARK 500 DG B 3 O4' - C1' - N9 ANGL. DEV. = 2.0 DEGREES REMARK 500 DC B 5 O3' - P - OP2 ANGL. DEV. = 7.4 DEGREES REMARK 500 DC B 5 O4' - C1' - N1 ANGL. DEV. = 3.5 DEGREES REMARK 500 DG B 8 O4' - C1' - N9 ANGL. DEV. = 2.1 DEGREES REMARK 500 DC C 16 O4' - C1' - N1 ANGL. DEV. = 3.2 DEGREES REMARK 500 DA E 4 O4' - C1' - N9 ANGL. DEV. = 2.0 DEGREES REMARK 500 DC E 5 O4' - C1' - N1 ANGL. DEV. = 2.6 DEGREES REMARK 500 DG E 8 O4' - C1' - N9 ANGL. DEV. = 2.9 DEGREES REMARK 500 DC E 11 O4' - C1' - N1 ANGL. DEV. = 2.0 DEGREES REMARK 500 DC F 16 O4' - C1' - N1 ANGL. DEV. = 2.7 DEGREES REMARK 500 DG F 19 O4' - C1' - N9 ANGL. DEV. = 2.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 88 72.72 31.31 REMARK 500 VAL A 197 -58.99 -130.10 REMARK 500 ALA A 276 59.33 -141.93 REMARK 500 TYR D 88 74.76 27.74 REMARK 500 VAL D 197 -62.51 -126.96 REMARK 500 ARG D 202 65.66 39.28 REMARK 500 SER D 204 58.65 -90.52 REMARK 500 ASP D 246 -165.06 -111.99 REMARK 500 ASP D 277 124.14 -35.15 REMARK 500 ARG D 332 141.41 -171.31 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 403 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 118 O REMARK 620 2 SER A 118 OG 77.5 REMARK 620 3 VAL A 123 O 88.1 91.4 REMARK 620 4 HOH A 522 O 71.0 145.9 75.2 REMARK 620 5 HOH A 552 O 156.3 78.8 92.0 131.8 REMARK 620 6 HOH C 119 O 136.9 136.7 111.3 77.2 64.5 REMARK 620 7 GLU D 181 OE2 154.7 104.7 66.8 98.6 36.1 57.0 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA D 403 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 181 OE2 REMARK 620 2 SER D 118 O 13.5 REMARK 620 3 SER D 118 OG 13.7 1.9 REMARK 620 4 VAL D 123 O 12.4 1.1 2.2 REMARK 620 5 HOH D 528 O 13.8 1.6 3.5 2.0 REMARK 620 6 HOH D 558 O 14.9 2.0 1.4 2.8 3.3 REMARK 620 7 HOH F 107 O 15.3 1.9 3.1 3.0 1.9 2.1 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 401 FE3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 198 SG REMARK 620 2 SF4 A 401 S1 115.7 REMARK 620 3 SF4 A 401 S2 113.0 105.0 REMARK 620 4 SF4 A 401 S4 112.6 103.5 106.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 401 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 205 SG REMARK 620 2 SF4 A 401 S1 113.0 REMARK 620 3 SF4 A 401 S3 109.2 105.0 REMARK 620 4 SF4 A 401 S4 119.3 106.0 103.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 401 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 208 SG REMARK 620 2 SF4 A 401 S2 119.0 REMARK 620 3 SF4 A 401 S3 113.7 104.9 REMARK 620 4 SF4 A 401 S4 109.3 106.4 102.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 401 FE4 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 214 SG REMARK 620 2 SF4 A 401 S1 107.5 REMARK 620 3 SF4 A 401 S2 118.3 104.8 REMARK 620 4 SF4 A 401 S3 116.3 104.2 104.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 404 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 257 OD1 REMARK 620 2 ASP A 257 OD2 51.2 REMARK 620 3 THR A 259 O 68.0 116.6 REMARK 620 4 THR A 259 OG1 83.1 89.8 64.8 REMARK 620 5 HOH A 528 O 65.8 98.1 68.2 130.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 D 401 FE3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 198 SG REMARK 620 2 SF4 D 401 S1 112.2 REMARK 620 3 SF4 D 401 S2 114.8 104.7 REMARK 620 4 SF4 D 401 S4 114.8 102.9 106.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 D 401 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 205 SG REMARK 620 2 SF4 D 401 S1 115.3 REMARK 620 3 SF4 D 401 S3 110.4 104.7 REMARK 620 4 SF4 D 401 S4 118.2 102.8 104.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 D 401 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 208 SG REMARK 620 2 SF4 D 401 S2 115.5 REMARK 620 3 SF4 D 401 S3 114.4 104.0 REMARK 620 4 SF4 D 401 S4 111.6 106.8 103.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 D 401 FE4 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 214 SG REMARK 620 2 SF4 D 401 S1 109.5 REMARK 620 3 SF4 D 401 S2 118.8 105.7 REMARK 620 4 SF4 D 401 S3 113.3 104.3 104.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA D 404 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP D 257 OD2 REMARK 620 2 THR D 259 O 129.9 REMARK 620 3 THR D 259 OG1 111.7 59.0 REMARK 620 N 1 2 DBREF 8DWE A 1 365 UNP P83847 MUTY_GEOSE 1 365 DBREF 8DWE B 1 11 PDB 8DWE 8DWE 1 11 DBREF 8DWE C 12 22 PDB 8DWE 8DWE 12 22 DBREF 8DWE D 1 365 UNP P83847 MUTY_GEOSE 1 365 DBREF 8DWE E 1 11 PDB 8DWE 8DWE 1 11 DBREF 8DWE F 12 22 PDB 8DWE 8DWE 12 22 SEQADV 8DWE GLN A 43 UNP P83847 GLU 43 ENGINEERED MUTATION SEQADV 8DWE GLN D 43 UNP P83847 GLU 43 ENGINEERED MUTATION SEQRES 1 A 365 MET THR ARG GLU THR GLU ARG PHE PRO ALA ARG GLU PHE SEQRES 2 A 365 GLN ARG ASP LEU LEU ASP TRP PHE ALA ARG GLU ARG ARG SEQRES 3 A 365 ASP LEU PRO TRP ARG LYS ASP ARG ASP PRO TYR LYS VAL SEQRES 4 A 365 TRP VAL SER GLN VAL MET LEU GLN GLN THR ARG VAL GLU SEQRES 5 A 365 THR VAL ILE PRO TYR PHE GLU GLN PHE ILE ASP ARG PHE SEQRES 6 A 365 PRO THR LEU GLU ALA LEU ALA ASP ALA ASP GLU ASP GLU SEQRES 7 A 365 VAL LEU LYS ALA TRP GLU GLY LEU GLY TYR TYR SER ARG SEQRES 8 A 365 VAL ARG ASN LEU HIS ALA ALA VAL LYS GLU VAL LYS THR SEQRES 9 A 365 ARG TYR GLY GLY LYS VAL PRO ASP ASP PRO ASP GLU PHE SEQRES 10 A 365 SER ARG LEU LYS GLY VAL GLY PRO TYR THR VAL GLY ALA SEQRES 11 A 365 VAL LEU SER LEU ALA TYR GLY VAL PRO GLU PRO ALA VAL SEQRES 12 A 365 ASP GLY ASN VAL MET ARG VAL LEU SER ARG LEU PHE LEU SEQRES 13 A 365 VAL THR ASP ASP ILE ALA LYS PRO SER THR ARG LYS ARG SEQRES 14 A 365 PHE GLU GLN ILE VAL ARG GLU ILE MET ALA TYR GLU ASN SEQRES 15 A 365 PRO GLY ALA PHE ASN GLU ALA LEU ILE GLU LEU GLY ALA SEQRES 16 A 365 LEU VAL CYS THR PRO ARG ARG PRO SER CYS LEU LEU CYS SEQRES 17 A 365 PRO VAL GLN ALA TYR CYS GLN ALA PHE ALA GLU GLY VAL SEQRES 18 A 365 ALA GLU GLU LEU PRO VAL LYS MET LYS LYS THR ALA VAL SEQRES 19 A 365 LYS GLN VAL PRO LEU ALA VAL ALA VAL LEU ALA ASP ASP SEQRES 20 A 365 GLU GLY ARG VAL LEU ILE ARG LYS ARG ASP SER THR GLY SEQRES 21 A 365 LEU LEU ALA ASN LEU TRP GLU PHE PRO SER CYS GLU THR SEQRES 22 A 365 ASP GLY ALA ASP GLY LYS GLU LYS LEU GLU GLN MET VAL SEQRES 23 A 365 GLY GLU GLN TYR GLY LEU GLN VAL GLU LEU THR GLU PRO SEQRES 24 A 365 ILE VAL SER PHE GLU HIS ALA PHE SER HIS LEU VAL TRP SEQRES 25 A 365 GLN LEU THR VAL PHE PRO GLY ARG LEU VAL HIS GLY GLY SEQRES 26 A 365 PRO VAL GLU GLU PRO TYR ARG LEU ALA PRO GLU ASP GLU SEQRES 27 A 365 LEU LYS ALA TYR ALA PHE PRO VAL SER HIS GLN ARG VAL SEQRES 28 A 365 TRP ARG GLU TYR LYS GLU TRP ALA SER GLY VAL ARG ARG SEQRES 29 A 365 PRO SEQRES 1 B 11 DA DA DG DA DC 8OG DT DG DG DA DC SEQRES 1 C 11 DT DG DT DC DC DA PRN DG DT DC DT SEQRES 1 D 365 MET THR ARG GLU THR GLU ARG PHE PRO ALA ARG GLU PHE SEQRES 2 D 365 GLN ARG ASP LEU LEU ASP TRP PHE ALA ARG GLU ARG ARG SEQRES 3 D 365 ASP LEU PRO TRP ARG LYS ASP ARG ASP PRO TYR LYS VAL SEQRES 4 D 365 TRP VAL SER GLN VAL MET LEU GLN GLN THR ARG VAL GLU SEQRES 5 D 365 THR VAL ILE PRO TYR PHE GLU GLN PHE ILE ASP ARG PHE SEQRES 6 D 365 PRO THR LEU GLU ALA LEU ALA ASP ALA ASP GLU ASP GLU SEQRES 7 D 365 VAL LEU LYS ALA TRP GLU GLY LEU GLY TYR TYR SER ARG SEQRES 8 D 365 VAL ARG ASN LEU HIS ALA ALA VAL LYS GLU VAL LYS THR SEQRES 9 D 365 ARG TYR GLY GLY LYS VAL PRO ASP ASP PRO ASP GLU PHE SEQRES 10 D 365 SER ARG LEU LYS GLY VAL GLY PRO TYR THR VAL GLY ALA SEQRES 11 D 365 VAL LEU SER LEU ALA TYR GLY VAL PRO GLU PRO ALA VAL SEQRES 12 D 365 ASP GLY ASN VAL MET ARG VAL LEU SER ARG LEU PHE LEU SEQRES 13 D 365 VAL THR ASP ASP ILE ALA LYS PRO SER THR ARG LYS ARG SEQRES 14 D 365 PHE GLU GLN ILE VAL ARG GLU ILE MET ALA TYR GLU ASN SEQRES 15 D 365 PRO GLY ALA PHE ASN GLU ALA LEU ILE GLU LEU GLY ALA SEQRES 16 D 365 LEU VAL CYS THR PRO ARG ARG PRO SER CYS LEU LEU CYS SEQRES 17 D 365 PRO VAL GLN ALA TYR CYS GLN ALA PHE ALA GLU GLY VAL SEQRES 18 D 365 ALA GLU GLU LEU PRO VAL LYS MET LYS LYS THR ALA VAL SEQRES 19 D 365 LYS GLN VAL PRO LEU ALA VAL ALA VAL LEU ALA ASP ASP SEQRES 20 D 365 GLU GLY ARG VAL LEU ILE ARG LYS ARG ASP SER THR GLY SEQRES 21 D 365 LEU LEU ALA ASN LEU TRP GLU PHE PRO SER CYS GLU THR SEQRES 22 D 365 ASP GLY ALA ASP GLY LYS GLU LYS LEU GLU GLN MET VAL SEQRES 23 D 365 GLY GLU GLN TYR GLY LEU GLN VAL GLU LEU THR GLU PRO SEQRES 24 D 365 ILE VAL SER PHE GLU HIS ALA PHE SER HIS LEU VAL TRP SEQRES 25 D 365 GLN LEU THR VAL PHE PRO GLY ARG LEU VAL HIS GLY GLY SEQRES 26 D 365 PRO VAL GLU GLU PRO TYR ARG LEU ALA PRO GLU ASP GLU SEQRES 27 D 365 LEU LYS ALA TYR ALA PHE PRO VAL SER HIS GLN ARG VAL SEQRES 28 D 365 TRP ARG GLU TYR LYS GLU TRP ALA SER GLY VAL ARG ARG SEQRES 29 D 365 PRO SEQRES 1 E 11 DA DA DG DA DC 8OG DT DG DG DA DC SEQRES 1 F 11 DT DG DT DC DC DA PRN DG DT DC DT HET 8OG B 6 34 HET PRN C 18 30 HET 8OG E 6 34 HET PRN F 18 30 HET SF4 A 401 8 HET EDO A 402 10 HET CA A 403 1 HET CA A 404 1 HET TRS B 101 20 HET SF4 D 401 8 HET EDO D 402 10 HET CA D 403 1 HET CA D 404 1 HET TRS E 101 20 HETNAM 8OG 8-OXO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE HETNAM PRN PURINE 2'-DEOXYRIBO-5'-MONOPHOSPHATE HETNAM SF4 IRON/SULFUR CLUSTER HETNAM EDO 1,2-ETHANEDIOL HETNAM CA CALCIUM ION HETNAM TRS 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL HETSYN 8OG 8-OXO-7,8-DIHYDRO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE HETSYN EDO ETHYLENE GLYCOL HETSYN TRS TRIS BUFFER FORMUL 2 8OG 2(C10 H14 N5 O8 P) FORMUL 3 PRN 2(C10 H13 N4 O6 P) FORMUL 7 SF4 2(FE4 S4) FORMUL 8 EDO 2(C2 H6 O2) FORMUL 9 CA 4(CA 2+) FORMUL 11 TRS 2(C4 H12 N O3 1+) FORMUL 17 HOH *204(H2 O) HELIX 1 AA1 PRO A 9 ARG A 25 1 17 HELIX 2 AA2 LEU A 28 LYS A 32 5 5 HELIX 3 AA3 ASP A 35 LEU A 46 1 12 HELIX 4 AA4 ARG A 50 PHE A 65 1 16 HELIX 5 AA5 THR A 67 ALA A 74 1 8 HELIX 6 AA6 ASP A 75 GLU A 84 1 10 HELIX 7 AA7 TYR A 89 TYR A 106 1 18 HELIX 8 AA8 ASP A 113 ARG A 119 1 7 HELIX 9 AA9 GLY A 124 GLY A 137 1 14 HELIX 10 AB1 ASP A 144 PHE A 155 1 12 HELIX 11 AB2 LYS A 163 MET A 178 1 16 HELIX 12 AB3 ASN A 182 VAL A 197 1 16 HELIX 13 AB4 SER A 204 CYS A 208 5 5 HELIX 14 AB5 VAL A 210 TYR A 213 5 4 HELIX 15 AB6 CYS A 214 GLY A 220 1 7 HELIX 16 AB7 VAL A 221 LEU A 225 5 5 HELIX 17 AB8 ASP A 277 GLU A 288 1 12 HELIX 18 AB9 PRO A 335 LYS A 340 1 6 HELIX 19 AC1 PRO A 345 ALA A 359 1 15 HELIX 20 AC2 PRO D 9 ARG D 25 1 17 HELIX 21 AC3 LEU D 28 LYS D 32 5 5 HELIX 22 AC4 ASP D 35 LEU D 46 1 12 HELIX 23 AC5 ARG D 50 PHE D 65 1 16 HELIX 24 AC6 THR D 67 ALA D 74 1 8 HELIX 25 AC7 ASP D 75 GLU D 84 1 10 HELIX 26 AC8 TYR D 89 GLY D 107 1 19 HELIX 27 AC9 ASP D 113 ARG D 119 1 7 HELIX 28 AD1 GLY D 124 TYR D 136 1 13 HELIX 29 AD2 ASP D 144 PHE D 155 1 12 HELIX 30 AD3 LYS D 163 MET D 178 1 16 HELIX 31 AD4 ASN D 182 VAL D 197 1 16 HELIX 32 AD5 SER D 204 CYS D 208 5 5 HELIX 33 AD6 VAL D 210 TYR D 213 5 4 HELIX 34 AD7 CYS D 214 GLY D 220 1 7 HELIX 35 AD8 VAL D 221 LEU D 225 5 5 HELIX 36 AD9 GLY D 278 GLY D 287 1 10 HELIX 37 AE1 ASP D 337 TYR D 342 5 6 HELIX 38 AE2 PRO D 345 SER D 360 1 16 SHEET 1 AA1 4 SER A 270 GLU A 272 0 SHEET 2 AA1 4 LYS A 235 ALA A 245 -1 N ALA A 240 O CYS A 271 SHEET 3 AA1 4 LEU A 310 HIS A 323 1 O PHE A 317 N VAL A 241 SHEET 4 AA1 4 LEU A 292 LEU A 296 -1 N GLN A 293 O VAL A 322 SHEET 1 AA2 4 SER A 270 GLU A 272 0 SHEET 2 AA2 4 LYS A 235 ALA A 245 -1 N ALA A 240 O CYS A 271 SHEET 3 AA2 4 LEU A 310 HIS A 323 1 O PHE A 317 N VAL A 241 SHEET 4 AA2 4 VAL A 301 ALA A 306 -1 N PHE A 303 O LEU A 314 SHEET 1 AA3 3 TRP A 266 GLU A 267 0 SHEET 2 AA3 3 VAL A 251 LYS A 255 -1 N ARG A 254 O GLU A 267 SHEET 3 AA3 3 TYR A 331 ALA A 334 -1 O ARG A 332 N ILE A 253 SHEET 1 AA4 4 SER D 270 GLU D 272 0 SHEET 2 AA4 4 LYS D 235 ALA D 245 -1 N ALA D 240 O CYS D 271 SHEET 3 AA4 4 LEU D 310 VAL D 322 1 O PHE D 317 N VAL D 241 SHEET 4 AA4 4 GLN D 293 LEU D 296 -1 N GLN D 293 O VAL D 322 SHEET 1 AA5 4 SER D 270 GLU D 272 0 SHEET 2 AA5 4 LYS D 235 ALA D 245 -1 N ALA D 240 O CYS D 271 SHEET 3 AA5 4 LEU D 310 VAL D 322 1 O PHE D 317 N VAL D 241 SHEET 4 AA5 4 VAL D 301 ALA D 306 -1 N PHE D 303 O LEU D 314 SHEET 1 AA6 3 TRP D 266 GLU D 267 0 SHEET 2 AA6 3 ARG D 250 LYS D 255 -1 N ARG D 254 O GLU D 267 SHEET 3 AA6 3 TYR D 331 PRO D 335 -1 O ALA D 334 N VAL D 251 LINK O3' DC B 5 P 8OG B 6 1555 1555 1.59 LINK O3' 8OG B 6 P DT B 7 1555 1555 1.60 LINK O3' DA C 17 P PRN C 18 1555 1555 1.60 LINK O3' PRN C 18 P DG C 19 1555 1555 1.62 LINK O3' DC E 5 P 8OG E 6 1555 1555 1.61 LINK O3' 8OG E 6 P DT E 7 1555 1555 1.60 LINK O3' DA F 17 P PRN F 18 1555 1555 1.61 LINK O3' PRN F 18 P DG F 19 1555 1555 1.64 LINK O SER A 118 CA CA A 403 1555 1555 2.22 LINK OG SER A 118 CA CA A 403 1555 1555 2.58 LINK O VAL A 123 CA CA A 403 1555 1555 2.39 LINK OE2 GLU A 181 CA CA D 403 1555 2555 2.34 LINK SG CYS A 198 FE3 SF4 A 401 1555 1555 2.44 LINK SG CYS A 205 FE2 SF4 A 401 1555 1555 2.50 LINK SG CYS A 208 FE1 SF4 A 401 1555 1555 2.39 LINK SG CYS A 214 FE4 SF4 A 401 1555 1555 2.41 LINK OD1 ASP A 257 CA CA A 404 1555 1555 2.65 LINK OD2 ASP A 257 CA CA A 404 1555 1555 2.43 LINK O THR A 259 CA CA A 404 1555 1555 2.68 LINK OG1 THR A 259 CA CA A 404 1555 1555 2.70 LINK CA CA A 403 O HOH A 522 1555 1555 2.45 LINK CA CA A 403 O HOH A 552 1555 1555 2.46 LINK CA CA A 403 O HOH C 119 1555 1555 2.64 LINK CA CA A 403 OE2 GLU D 181 2645 1555 2.55 LINK CA CA A 404 O HOH A 528 1555 1555 2.44 LINK O SER D 118 CA CA D 403 1555 1555 2.35 LINK OG SER D 118 CA CA D 403 1555 1555 2.44 LINK O VAL D 123 CA CA D 403 1555 1555 2.36 LINK SG CYS D 198 FE3 SF4 D 401 1555 1555 2.25 LINK SG CYS D 205 FE2 SF4 D 401 1555 1555 2.36 LINK SG CYS D 208 FE1 SF4 D 401 1555 1555 2.42 LINK SG CYS D 214 FE4 SF4 D 401 1555 1555 2.21 LINK OD2 ASP D 257 CA CA D 404 1555 1555 3.07 LINK O THR D 259 CA CA D 404 1555 1555 2.66 LINK OG1 THR D 259 CA CA D 404 1555 1555 2.92 LINK CA CA D 403 O HOH D 528 1555 1555 2.50 LINK CA CA D 403 O HOH D 558 1555 1555 2.64 LINK CA CA D 403 O HOH F 107 1555 1555 2.58 CISPEP 1 LEU A 225 PRO A 226 0 -6.51 CISPEP 2 GLU A 329 PRO A 330 0 6.42 CISPEP 3 LEU D 225 PRO D 226 0 3.37 CISPEP 4 GLU D 329 PRO D 330 0 7.56 CRYST1 48.630 137.960 74.490 90.00 101.00 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020563 0.000000 0.003997 0.00000 SCALE2 0.000000 0.007248 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013676 0.00000