data_8DZD # _entry.id 8DZD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.375 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8DZD pdb_00008dzd 10.2210/pdb8dzd/pdb WWPDB D_1000267253 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.details 'Same structure as 7REF with Sucrose bound' _pdbx_database_related.db_id 7REF _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8DZD _pdbx_database_status.recvd_initial_deposition_date 2022-08-06 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Kent, J.E.' 1 0000-0002-4856-525X 'Aleshin, A.E.' 2 0000-0001-5079-6682 'Marassi, F.M.' 3 0000-0003-2695-5844 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Structure of MS3494 from Mycobacterium smegmatis bound to sucrose' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kent, J.E.' 1 ? primary 'Aleshin, A.E.' 2 ? primary 'Marassi, F.M.' 3 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 8DZD _cell.details ? _cell.formula_units_Z ? _cell.length_a 98.463 _cell.length_a_esd ? _cell.length_b 98.463 _cell.length_b_esd ? _cell.length_c 45.581 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 12 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8DZD _symmetry.cell_setting ? _symmetry.Int_Tables_number 168 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 6' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man MS3494 15077.604 2 ? ? ? ? 2 branched man 'beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose' 342.297 2 ? ? ? ? 3 non-polymer syn 'ACETATE ION' 59.044 1 ? ? ? ? 4 water nat water 18.015 170 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Putative secreted protein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;ADATDDYPIPNRIMRTPCTAEQIMAAARDVEPVYYERYMTDYKNKPPHVQQAARDRIHWFFSMDYAGRRQYSENTATDAF FEQLAWMWPNWAKLFFNNKGVAANTTDVCEQYPPDDMSVWNWDDDDK ; _entity_poly.pdbx_seq_one_letter_code_can ;ADATDDYPIPNRIMRTPCTAEQIMAAARDVEPVYYERYMTDYKNKPPHVQQAARDRIHWFFSMDYAGRRQYSENTATDAF FEQLAWMWPNWAKLFFNNKGVAANTTDVCEQYPPDDMSVWNWDDDDK ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 ASP n 1 3 ALA n 1 4 THR n 1 5 ASP n 1 6 ASP n 1 7 TYR n 1 8 PRO n 1 9 ILE n 1 10 PRO n 1 11 ASN n 1 12 ARG n 1 13 ILE n 1 14 MET n 1 15 ARG n 1 16 THR n 1 17 PRO n 1 18 CYS n 1 19 THR n 1 20 ALA n 1 21 GLU n 1 22 GLN n 1 23 ILE n 1 24 MET n 1 25 ALA n 1 26 ALA n 1 27 ALA n 1 28 ARG n 1 29 ASP n 1 30 VAL n 1 31 GLU n 1 32 PRO n 1 33 VAL n 1 34 TYR n 1 35 TYR n 1 36 GLU n 1 37 ARG n 1 38 TYR n 1 39 MET n 1 40 THR n 1 41 ASP n 1 42 TYR n 1 43 LYS n 1 44 ASN n 1 45 LYS n 1 46 PRO n 1 47 PRO n 1 48 HIS n 1 49 VAL n 1 50 GLN n 1 51 GLN n 1 52 ALA n 1 53 ALA n 1 54 ARG n 1 55 ASP n 1 56 ARG n 1 57 ILE n 1 58 HIS n 1 59 TRP n 1 60 PHE n 1 61 PHE n 1 62 SER n 1 63 MET n 1 64 ASP n 1 65 TYR n 1 66 ALA n 1 67 GLY n 1 68 ARG n 1 69 ARG n 1 70 GLN n 1 71 TYR n 1 72 SER n 1 73 GLU n 1 74 ASN n 1 75 THR n 1 76 ALA n 1 77 THR n 1 78 ASP n 1 79 ALA n 1 80 PHE n 1 81 PHE n 1 82 GLU n 1 83 GLN n 1 84 LEU n 1 85 ALA n 1 86 TRP n 1 87 MET n 1 88 TRP n 1 89 PRO n 1 90 ASN n 1 91 TRP n 1 92 ALA n 1 93 LYS n 1 94 LEU n 1 95 PHE n 1 96 PHE n 1 97 ASN n 1 98 ASN n 1 99 LYS n 1 100 GLY n 1 101 VAL n 1 102 ALA n 1 103 ALA n 1 104 ASN n 1 105 THR n 1 106 THR n 1 107 ASP n 1 108 VAL n 1 109 CYS n 1 110 GLU n 1 111 GLN n 1 112 TYR n 1 113 PRO n 1 114 PRO n 1 115 ASP n 1 116 ASP n 1 117 MET n 1 118 SER n 1 119 VAL n 1 120 TRP n 1 121 ASN n 1 122 TRP n 1 123 ASP n 1 124 ASP n 1 125 ASP n 1 126 ASP n 1 127 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 127 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene MSMEG_3494 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 700084 / mc(2)155' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mycolicibacterium smegmatis MC2 155' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 246196 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A0QY10_MYCS2 _struct_ref.pdbx_db_accession A0QY10 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;ADATDDYPIPNRIMRTPCTAEQIMAAARDVEPVYYERYMTDYKNKPPHVQQAARDRIHWFFSMDYAGRRQYSENTATDAF FEQLAWMWPNWAKLFFNNKGVAANTTDVCEQYPPDDMSVWNW ; _struct_ref.pdbx_align_begin 32 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8DZD A 1 ? 122 ? A0QY10 32 ? 153 ? 32 153 2 1 8DZD B 1 ? 122 ? A0QY10 32 ? 153 ? 32 153 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 8DZD ASP A 123 ? UNP A0QY10 ? ? 'expression tag' 154 1 1 8DZD ASP A 124 ? UNP A0QY10 ? ? 'expression tag' 155 2 1 8DZD ASP A 125 ? UNP A0QY10 ? ? 'expression tag' 156 3 1 8DZD ASP A 126 ? UNP A0QY10 ? ? 'expression tag' 157 4 1 8DZD LYS A 127 ? UNP A0QY10 ? ? 'expression tag' 158 5 2 8DZD ASP B 123 ? UNP A0QY10 ? ? 'expression tag' 154 6 2 8DZD ASP B 124 ? UNP A0QY10 ? ? 'expression tag' 155 7 2 8DZD ASP B 125 ? UNP A0QY10 ? ? 'expression tag' 156 8 2 8DZD ASP B 126 ? UNP A0QY10 ? ? 'expression tag' 157 9 2 8DZD LYS B 127 ? UNP A0QY10 ? ? 'expression tag' 158 10 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FRU 'D-saccharide, beta linking' . beta-D-fructofuranose 'beta-D-fructose; D-fructose; fructose' 'C6 H12 O6' 180.156 GLC 'D-saccharide, alpha linking' . alpha-D-glucopyranose 'alpha-D-glucose; D-glucose; glucose' 'C6 H12 O6' 180.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8DZD _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.12 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 41.85 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;26 % PEG 4K, 0.2 M Lithium acetate (pH 7.5) Soaked in 20 % Sucrose ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2022-05-08 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97946 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRL BEAMLINE BL12-2' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97946 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL12-2 _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 8DZD _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.90 _reflns.d_resolution_low 33.469 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 20058 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 10.2 _reflns.pdbx_Rmerge_I_obs 0.090 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 20.4 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.095 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? _reflns.pdbx_CC_split_method ? # _reflns_shell.d_res_high 1.90 _reflns_shell.d_res_low 1.95 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 4.6 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1343 _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.746 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 0.784 _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.950 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] -1.309 _refine.aniso_B[1][2] -0.654 _refine.aniso_B[1][3] -0.000 _refine.aniso_B[2][2] -1.309 _refine.aniso_B[2][3] -0.000 _refine.aniso_B[3][3] 4.246 _refine.B_iso_max ? _refine.B_iso_mean 23.013 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.975 _refine.correlation_coeff_Fo_to_Fc_free 0.962 _refine.details 'Hydrogens have been added in their riding positions' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8DZD _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.901 _refine.ls_d_res_low 33.469 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 20057 _refine.ls_number_reflns_R_free 958 _refine.ls_number_reflns_R_work 19099 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.856 _refine.ls_percent_reflns_R_free 4.776 _refine.ls_R_factor_all 0.142 _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free 0.1750 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1404 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'BABINET MODEL PLUS MASK' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 7REF _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.130 _refine.pdbx_overall_ESU_R_Free 0.117 _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 3.354 _refine.overall_SU_ML 0.094 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2038 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 50 _refine_hist.number_atoms_solvent 170 _refine_hist.number_atoms_total 2258 _refine_hist.d_res_high 1.901 _refine_hist.d_res_low 33.469 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.008 0.012 2201 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.005 0.016 1795 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.472 1.663 3013 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 0.546 1.559 4201 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 5.823 5.000 249 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 10.643 10.000 16 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 14.335 10.000 318 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 17.418 10.000 125 ? r_dihedral_angle_6_deg ? ? 'X-RAY DIFFRACTION' ? 0.078 0.200 300 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.008 0.020 2525 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 483 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? 0.216 0.200 488 ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.186 0.200 1689 ? r_symmetry_nbd_other ? ? 'X-RAY DIFFRACTION' ? 0.187 0.200 1105 ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? 0.077 0.200 939 ? r_symmetry_nbtor_other ? ? 'X-RAY DIFFRACTION' ? 0.174 0.200 117 ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.158 0.200 22 ? r_symmetry_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.179 0.200 105 ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? 0.211 0.200 12 ? r_symmetry_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 1.927 2.268 991 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 1.913 2.268 991 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 2.829 3.375 1241 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 2.828 3.378 1242 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 3.237 2.672 1210 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 3.237 2.675 1211 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? 4.943 3.880 1772 ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 4.941 3.882 1773 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 6.385 30.584 2694 ? r_lrange_it ? ? 'X-RAY DIFFRACTION' ? 6.337 28.660 2661 ? r_lrange_other ? ? 'X-RAY DIFFRACTION' ? 0.106 0.050 4254 ? r_ncsr_local_group_1 ? ? # loop_ _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_B_iso _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_asym_id _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.pdbx_rms _refine_ls_restr_ncs.pdbx_weight _refine_ls_restr_ncs.pdbx_ens_id 'X-RAY DIFFRACTION' 1 ? ? 0.10606 ? 0.05008 1 'Local ncs' ? A ? ? ? 1 'X-RAY DIFFRACTION' 2 ? ? 0.10606 ? 0.05008 2 'Local ncs' ? A ? ? ? 1 # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.901 1.950 1448 . 84 1363 99.9309 . 0.220 . 0.226 . 0.219 . . . . . 0.179 . 20 . 0.949 0.942 'X-RAY DIFFRACTION' 1.950 2.003 1465 . 77 1388 100.0000 . 0.198 . 0.230 . 0.196 . . . . . 0.156 . 20 . 0.961 0.963 'X-RAY DIFFRACTION' 2.003 2.061 1390 . 58 1332 100.0000 . 0.183 . 0.182 . 0.183 . . . . . 0.148 . 20 . 0.970 0.958 'X-RAY DIFFRACTION' 2.061 2.124 1340 . 57 1282 99.9254 . 0.172 . 0.246 . 0.169 . . . . . 0.137 . 20 . 0.974 0.953 'X-RAY DIFFRACTION' 2.124 2.193 1309 . 50 1249 99.2361 . 0.174 . 0.228 . 0.172 . . . . . 0.144 . 20 . 0.977 0.965 'X-RAY DIFFRACTION' 2.193 2.270 1265 . 64 1201 100.0000 . 0.153 . 0.201 . 0.150 . . . . . 0.126 . 20 . 0.983 0.968 'X-RAY DIFFRACTION' 2.270 2.355 1251 . 49 1202 100.0000 . 0.140 . 0.190 . 0.138 . . . . . 0.116 . 20 . 0.987 0.982 'X-RAY DIFFRACTION' 2.355 2.451 1167 . 52 1115 100.0000 . 0.132 . 0.187 . 0.130 . . . . . 0.113 . 20 . 0.988 0.976 'X-RAY DIFFRACTION' 2.451 2.559 1133 . 69 1061 99.7352 . 0.133 . 0.179 . 0.130 . . . . . 0.109 . 20 . 0.988 0.983 'X-RAY DIFFRACTION' 2.559 2.683 1093 . 64 1029 100.0000 . 0.137 . 0.207 . 0.132 . . . . . 0.117 . 20 . 0.989 0.975 'X-RAY DIFFRACTION' 2.683 2.828 1017 . 51 966 100.0000 . 0.137 . 0.205 . 0.134 . . . . . 0.118 . 20 . 0.989 0.977 'X-RAY DIFFRACTION' 2.828 2.998 992 . 42 950 100.0000 . 0.139 . 0.228 . 0.136 . . . . . 0.125 . 20 . 0.989 0.974 'X-RAY DIFFRACTION' 2.998 3.203 926 . 35 891 100.0000 . 0.140 . 0.159 . 0.139 . . . . . 0.127 . 20 . 0.987 0.983 'X-RAY DIFFRACTION' 3.203 3.457 862 . 47 815 100.0000 . 0.127 . 0.175 . 0.124 . . . . . 0.116 . 20 . 0.990 0.977 'X-RAY DIFFRACTION' 3.457 3.783 797 . 42 753 99.7491 . 0.113 . 0.135 . 0.111 . . . . . 0.112 . 20 . 0.993 0.989 'X-RAY DIFFRACTION' 3.783 4.223 722 . 24 692 99.1690 . 0.113 . 0.119 . 0.113 . . . . . 0.115 . 20 . 0.992 0.989 'X-RAY DIFFRACTION' 4.223 4.863 642 . 24 618 100.0000 . 0.117 . 0.117 . 0.117 . . . . . 0.121 . 20 . 0.992 0.993 'X-RAY DIFFRACTION' 4.863 5.925 552 . 35 517 100.0000 . 0.144 . 0.173 . 0.142 . . . . . 0.144 . 20 . 0.988 0.981 'X-RAY DIFFRACTION' 5.925 8.251 440 . 23 416 99.7727 . 0.153 . 0.131 . 0.154 . . . . . 0.160 . 20 . 0.987 0.988 'X-RAY DIFFRACTION' 8.251 33.469 270 . 11 259 100.0000 . 0.166 . 0.132 . 0.168 . . . . . 0.185 . 20 . 0.980 0.982 # loop_ _struct_ncs_dom.id _struct_ncs_dom.pdbx_ens_id _struct_ncs_dom.details 1 1 A 2 1 A # loop_ _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_comp_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_comp_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.selection_details 1 1 1 A ALA 3 . A TRP 122 . A ALA 34 A TRP 153 ? ? 1 2 1 A ALA 3 . A TRP 122 . A ALA 34 A TRP 153 ? ? # _struct_ncs_ens.id 1 _struct_ncs_ens.details 'Local NCS retraints between domains: 1 2' # _struct.entry_id 8DZD _struct.title 'Structure of MS3494 from Mycobacterium smegmatis bound to sucrose' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8DZD _struct_keywords.text 'UNKNOWN FUNCTION' _struct_keywords.pdbx_keywords 'UNKNOWN FUNCTION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 4 ? G N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 PRO A 10 ? THR A 16 ? PRO A 41 THR A 47 1 ? 7 HELX_P HELX_P2 AA2 THR A 19 ? GLU A 31 ? THR A 50 GLU A 62 1 ? 13 HELX_P HELX_P3 AA3 GLU A 31 ? ASN A 44 ? GLU A 62 ASN A 75 1 ? 14 HELX_P HELX_P4 AA4 PRO A 46 ? MET A 63 ? PRO A 77 MET A 94 1 ? 18 HELX_P HELX_P5 AA5 ASP A 64 ? ASP A 78 ? ASP A 95 ASP A 109 1 ? 15 HELX_P HELX_P6 AA6 GLU A 82 ? MET A 87 ? GLU A 113 MET A 118 5 ? 6 HELX_P HELX_P7 AA7 ALA A 92 ? ASN A 97 ? ALA A 123 ASN A 128 1 ? 6 HELX_P HELX_P8 AA8 ASN A 98 ? ASP A 107 ? ASN A 129 ASP A 138 1 ? 10 HELX_P HELX_P9 AA9 VAL A 108 ? TYR A 112 ? VAL A 139 TYR A 143 5 ? 5 HELX_P HELX_P10 AB1 ASP A 116 ? ASN A 121 ? ASP A 147 ASN A 152 5 ? 6 HELX_P HELX_P11 AB2 PRO B 10 ? THR B 16 ? PRO B 41 THR B 47 1 ? 7 HELX_P HELX_P12 AB3 THR B 19 ? GLU B 31 ? THR B 50 GLU B 62 1 ? 13 HELX_P HELX_P13 AB4 GLU B 31 ? ASN B 44 ? GLU B 62 ASN B 75 1 ? 14 HELX_P HELX_P14 AB5 PRO B 46 ? MET B 63 ? PRO B 77 MET B 94 1 ? 18 HELX_P HELX_P15 AB6 ASP B 64 ? ASP B 78 ? ASP B 95 ASP B 109 1 ? 15 HELX_P HELX_P16 AB7 GLU B 82 ? MET B 87 ? GLU B 113 MET B 118 5 ? 6 HELX_P HELX_P17 AB8 ALA B 92 ? ASN B 97 ? ALA B 123 ASN B 128 1 ? 6 HELX_P HELX_P18 AB9 ASN B 98 ? CYS B 109 ? ASN B 129 CYS B 140 1 ? 12 HELX_P HELX_P19 AC1 GLU B 110 ? TYR B 112 ? GLU B 141 TYR B 143 5 ? 3 HELX_P HELX_P20 AC2 ASP B 116 ? ASN B 121 ? ASP B 147 ASN B 152 5 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 18 SG ? ? ? 1_555 A CYS 109 SG ? ? A CYS 49 A CYS 140 1_555 ? ? ? ? ? ? ? 2.106 ? ? disulf2 disulf ? ? B CYS 18 SG ? ? ? 1_555 B CYS 109 SG ? ? B CYS 49 B CYS 140 1_555 ? ? ? ? ? ? ? 2.095 ? ? covale1 covale both ? C GLC . C1 ? ? ? 1_555 C FRU . O2 ? ? C GLC 1 C FRU 2 1_555 ? ? ? ? ? ? ? 1.427 ? ? covale2 covale both ? D GLC . C1 ? ? ? 1_555 D FRU . O2 ? ? D GLC 1 D FRU 2 1_555 ? ? ? ? ? ? ? 1.439 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 TYR 7 A . ? TYR 38 A PRO 8 A ? PRO 39 A 1 0.04 2 TYR 7 B . ? TYR 38 B PRO 8 B ? PRO 39 B 1 -1.10 # _atom_sites.entry_id 8DZD _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.010156 _atom_sites.fract_transf_matrix[1][2] 0.005864 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011727 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.021939 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.pdbx_scat_Z _atom_type.pdbx_N_electrons _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c C 6 6 2.310 20.844 1.020 10.208 1.589 0.569 0.865 51.651 0.216 H 1 1 0.493 10.511 0.323 26.126 0.140 3.142 0.041 57.800 0.003 N 7 7 12.222 0.006 3.135 9.893 2.014 28.997 1.167 0.583 -11.538 O 8 8 3.049 13.277 2.287 5.701 1.546 0.324 0.867 32.909 0.251 S 16 16 6.905 1.468 5.203 22.215 1.438 0.254 1.586 56.172 1.050 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 32 ? ? ? A . n A 1 2 ASP 2 33 33 ASP ASP A . n A 1 3 ALA 3 34 34 ALA ALA A . n A 1 4 THR 4 35 35 THR THR A . n A 1 5 ASP 5 36 36 ASP ASP A . n A 1 6 ASP 6 37 37 ASP ASP A . n A 1 7 TYR 7 38 38 TYR TYR A . n A 1 8 PRO 8 39 39 PRO PRO A . n A 1 9 ILE 9 40 40 ILE ILE A . n A 1 10 PRO 10 41 41 PRO PRO A . n A 1 11 ASN 11 42 42 ASN ASN A . n A 1 12 ARG 12 43 43 ARG ARG A . n A 1 13 ILE 13 44 44 ILE ILE A . n A 1 14 MET 14 45 45 MET MET A . n A 1 15 ARG 15 46 46 ARG ARG A . n A 1 16 THR 16 47 47 THR THR A . n A 1 17 PRO 17 48 48 PRO PRO A . n A 1 18 CYS 18 49 49 CYS CYS A . n A 1 19 THR 19 50 50 THR THR A . n A 1 20 ALA 20 51 51 ALA ALA A . n A 1 21 GLU 21 52 52 GLU GLU A . n A 1 22 GLN 22 53 53 GLN GLN A . n A 1 23 ILE 23 54 54 ILE ILE A . n A 1 24 MET 24 55 55 MET MET A . n A 1 25 ALA 25 56 56 ALA ALA A . n A 1 26 ALA 26 57 57 ALA ALA A . n A 1 27 ALA 27 58 58 ALA ALA A . n A 1 28 ARG 28 59 59 ARG ARG A . n A 1 29 ASP 29 60 60 ASP ASP A . n A 1 30 VAL 30 61 61 VAL VAL A . n A 1 31 GLU 31 62 62 GLU GLU A . n A 1 32 PRO 32 63 63 PRO PRO A . n A 1 33 VAL 33 64 64 VAL VAL A . n A 1 34 TYR 34 65 65 TYR TYR A . n A 1 35 TYR 35 66 66 TYR TYR A . n A 1 36 GLU 36 67 67 GLU GLU A . n A 1 37 ARG 37 68 68 ARG ARG A . n A 1 38 TYR 38 69 69 TYR TYR A . n A 1 39 MET 39 70 70 MET MET A . n A 1 40 THR 40 71 71 THR THR A . n A 1 41 ASP 41 72 72 ASP ASP A . n A 1 42 TYR 42 73 73 TYR TYR A . n A 1 43 LYS 43 74 74 LYS LYS A . n A 1 44 ASN 44 75 75 ASN ASN A . n A 1 45 LYS 45 76 76 LYS LYS A . n A 1 46 PRO 46 77 77 PRO PRO A . n A 1 47 PRO 47 78 78 PRO PRO A . n A 1 48 HIS 48 79 79 HIS HIS A . n A 1 49 VAL 49 80 80 VAL VAL A . n A 1 50 GLN 50 81 81 GLN GLN A . n A 1 51 GLN 51 82 82 GLN GLN A . n A 1 52 ALA 52 83 83 ALA ALA A . n A 1 53 ALA 53 84 84 ALA ALA A . n A 1 54 ARG 54 85 85 ARG ARG A . n A 1 55 ASP 55 86 86 ASP ASP A . n A 1 56 ARG 56 87 87 ARG ARG A . n A 1 57 ILE 57 88 88 ILE ILE A . n A 1 58 HIS 58 89 89 HIS HIS A . n A 1 59 TRP 59 90 90 TRP TRP A . n A 1 60 PHE 60 91 91 PHE PHE A . n A 1 61 PHE 61 92 92 PHE PHE A . n A 1 62 SER 62 93 93 SER SER A . n A 1 63 MET 63 94 94 MET MET A . n A 1 64 ASP 64 95 95 ASP ASP A . n A 1 65 TYR 65 96 96 TYR TYR A . n A 1 66 ALA 66 97 97 ALA ALA A . n A 1 67 GLY 67 98 98 GLY GLY A . n A 1 68 ARG 68 99 99 ARG ARG A . n A 1 69 ARG 69 100 100 ARG ARG A . n A 1 70 GLN 70 101 101 GLN GLN A . n A 1 71 TYR 71 102 102 TYR TYR A . n A 1 72 SER 72 103 103 SER SER A . n A 1 73 GLU 73 104 104 GLU GLU A . n A 1 74 ASN 74 105 105 ASN ASN A . n A 1 75 THR 75 106 106 THR THR A . n A 1 76 ALA 76 107 107 ALA ALA A . n A 1 77 THR 77 108 108 THR THR A . n A 1 78 ASP 78 109 109 ASP ASP A . n A 1 79 ALA 79 110 110 ALA ALA A . n A 1 80 PHE 80 111 111 PHE PHE A . n A 1 81 PHE 81 112 112 PHE PHE A . n A 1 82 GLU 82 113 113 GLU GLU A . n A 1 83 GLN 83 114 114 GLN GLN A . n A 1 84 LEU 84 115 115 LEU LEU A . n A 1 85 ALA 85 116 116 ALA ALA A . n A 1 86 TRP 86 117 117 TRP TRP A . n A 1 87 MET 87 118 118 MET MET A . n A 1 88 TRP 88 119 119 TRP TRP A . n A 1 89 PRO 89 120 120 PRO PRO A . n A 1 90 ASN 90 121 121 ASN ASN A . n A 1 91 TRP 91 122 122 TRP TRP A . n A 1 92 ALA 92 123 123 ALA ALA A . n A 1 93 LYS 93 124 124 LYS LYS A . n A 1 94 LEU 94 125 125 LEU LEU A . n A 1 95 PHE 95 126 126 PHE PHE A . n A 1 96 PHE 96 127 127 PHE PHE A . n A 1 97 ASN 97 128 128 ASN ASN A . n A 1 98 ASN 98 129 129 ASN ASN A . n A 1 99 LYS 99 130 130 LYS LYS A . n A 1 100 GLY 100 131 131 GLY GLY A . n A 1 101 VAL 101 132 132 VAL VAL A . n A 1 102 ALA 102 133 133 ALA ALA A . n A 1 103 ALA 103 134 134 ALA ALA A . n A 1 104 ASN 104 135 135 ASN ASN A . n A 1 105 THR 105 136 136 THR THR A . n A 1 106 THR 106 137 137 THR THR A . n A 1 107 ASP 107 138 138 ASP ASP A . n A 1 108 VAL 108 139 139 VAL VAL A . n A 1 109 CYS 109 140 140 CYS CYS A . n A 1 110 GLU 110 141 141 GLU GLU A . n A 1 111 GLN 111 142 142 GLN GLN A . n A 1 112 TYR 112 143 143 TYR TYR A . n A 1 113 PRO 113 144 144 PRO PRO A . n A 1 114 PRO 114 145 145 PRO PRO A . n A 1 115 ASP 115 146 146 ASP ASP A . n A 1 116 ASP 116 147 147 ASP ASP A . n A 1 117 MET 117 148 148 MET MET A . n A 1 118 SER 118 149 149 SER SER A . n A 1 119 VAL 119 150 150 VAL VAL A . n A 1 120 TRP 120 151 151 TRP TRP A . n A 1 121 ASN 121 152 152 ASN ASN A . n A 1 122 TRP 122 153 153 TRP TRP A . n A 1 123 ASP 123 154 154 ASP ASP A . n A 1 124 ASP 124 155 ? ? ? A . n A 1 125 ASP 125 156 ? ? ? A . n A 1 126 ASP 126 157 ? ? ? A . n A 1 127 LYS 127 158 ? ? ? A . n B 1 1 ALA 1 32 ? ? ? B . n B 1 2 ASP 2 33 ? ? ? B . n B 1 3 ALA 3 34 34 ALA ALA B . n B 1 4 THR 4 35 35 THR THR B . n B 1 5 ASP 5 36 36 ASP ASP B . n B 1 6 ASP 6 37 37 ASP ASP B . n B 1 7 TYR 7 38 38 TYR TYR B . n B 1 8 PRO 8 39 39 PRO PRO B . n B 1 9 ILE 9 40 40 ILE ILE B . n B 1 10 PRO 10 41 41 PRO PRO B . n B 1 11 ASN 11 42 42 ASN ASN B . n B 1 12 ARG 12 43 43 ARG ARG B . n B 1 13 ILE 13 44 44 ILE ILE B . n B 1 14 MET 14 45 45 MET MET B . n B 1 15 ARG 15 46 46 ARG ARG B . n B 1 16 THR 16 47 47 THR THR B . n B 1 17 PRO 17 48 48 PRO PRO B . n B 1 18 CYS 18 49 49 CYS CYS B . n B 1 19 THR 19 50 50 THR THR B . n B 1 20 ALA 20 51 51 ALA ALA B . n B 1 21 GLU 21 52 52 GLU GLU B . n B 1 22 GLN 22 53 53 GLN GLN B . n B 1 23 ILE 23 54 54 ILE ILE B . n B 1 24 MET 24 55 55 MET MET B . n B 1 25 ALA 25 56 56 ALA ALA B . n B 1 26 ALA 26 57 57 ALA ALA B . n B 1 27 ALA 27 58 58 ALA ALA B . n B 1 28 ARG 28 59 59 ARG ARG B . n B 1 29 ASP 29 60 60 ASP ASP B . n B 1 30 VAL 30 61 61 VAL VAL B . n B 1 31 GLU 31 62 62 GLU GLU B . n B 1 32 PRO 32 63 63 PRO PRO B . n B 1 33 VAL 33 64 64 VAL VAL B . n B 1 34 TYR 34 65 65 TYR TYR B . n B 1 35 TYR 35 66 66 TYR TYR B . n B 1 36 GLU 36 67 67 GLU GLU B . n B 1 37 ARG 37 68 68 ARG ARG B . n B 1 38 TYR 38 69 69 TYR TYR B . n B 1 39 MET 39 70 70 MET MET B . n B 1 40 THR 40 71 71 THR THR B . n B 1 41 ASP 41 72 72 ASP ASP B . n B 1 42 TYR 42 73 73 TYR TYR B . n B 1 43 LYS 43 74 74 LYS LYS B . n B 1 44 ASN 44 75 75 ASN ASN B . n B 1 45 LYS 45 76 76 LYS LYS B . n B 1 46 PRO 46 77 77 PRO PRO B . n B 1 47 PRO 47 78 78 PRO PRO B . n B 1 48 HIS 48 79 79 HIS HIS B . n B 1 49 VAL 49 80 80 VAL VAL B . n B 1 50 GLN 50 81 81 GLN GLN B . n B 1 51 GLN 51 82 82 GLN GLN B . n B 1 52 ALA 52 83 83 ALA ALA B . n B 1 53 ALA 53 84 84 ALA ALA B . n B 1 54 ARG 54 85 85 ARG ARG B . n B 1 55 ASP 55 86 86 ASP ASP B . n B 1 56 ARG 56 87 87 ARG ARG B . n B 1 57 ILE 57 88 88 ILE ILE B . n B 1 58 HIS 58 89 89 HIS HIS B . n B 1 59 TRP 59 90 90 TRP TRP B . n B 1 60 PHE 60 91 91 PHE PHE B . n B 1 61 PHE 61 92 92 PHE PHE B . n B 1 62 SER 62 93 93 SER SER B . n B 1 63 MET 63 94 94 MET MET B . n B 1 64 ASP 64 95 95 ASP ASP B . n B 1 65 TYR 65 96 96 TYR TYR B . n B 1 66 ALA 66 97 97 ALA ALA B . n B 1 67 GLY 67 98 98 GLY GLY B . n B 1 68 ARG 68 99 99 ARG ARG B . n B 1 69 ARG 69 100 100 ARG ARG B . n B 1 70 GLN 70 101 101 GLN GLN B . n B 1 71 TYR 71 102 102 TYR TYR B . n B 1 72 SER 72 103 103 SER SER B . n B 1 73 GLU 73 104 104 GLU GLU B . n B 1 74 ASN 74 105 105 ASN ASN B . n B 1 75 THR 75 106 106 THR THR B . n B 1 76 ALA 76 107 107 ALA ALA B . n B 1 77 THR 77 108 108 THR THR B . n B 1 78 ASP 78 109 109 ASP ASP B . n B 1 79 ALA 79 110 110 ALA ALA B . n B 1 80 PHE 80 111 111 PHE PHE B . n B 1 81 PHE 81 112 112 PHE PHE B . n B 1 82 GLU 82 113 113 GLU GLU B . n B 1 83 GLN 83 114 114 GLN GLN B . n B 1 84 LEU 84 115 115 LEU LEU B . n B 1 85 ALA 85 116 116 ALA ALA B . n B 1 86 TRP 86 117 117 TRP TRP B . n B 1 87 MET 87 118 118 MET MET B . n B 1 88 TRP 88 119 119 TRP TRP B . n B 1 89 PRO 89 120 120 PRO PRO B . n B 1 90 ASN 90 121 121 ASN ASN B . n B 1 91 TRP 91 122 122 TRP TRP B . n B 1 92 ALA 92 123 123 ALA ALA B . n B 1 93 LYS 93 124 124 LYS LYS B . n B 1 94 LEU 94 125 125 LEU LEU B . n B 1 95 PHE 95 126 126 PHE PHE B . n B 1 96 PHE 96 127 127 PHE PHE B . n B 1 97 ASN 97 128 128 ASN ASN B . n B 1 98 ASN 98 129 129 ASN ASN B . n B 1 99 LYS 99 130 130 LYS LYS B . n B 1 100 GLY 100 131 131 GLY GLY B . n B 1 101 VAL 101 132 132 VAL VAL B . n B 1 102 ALA 102 133 133 ALA ALA B . n B 1 103 ALA 103 134 134 ALA ALA B . n B 1 104 ASN 104 135 135 ASN ASN B . n B 1 105 THR 105 136 136 THR THR B . n B 1 106 THR 106 137 137 THR THR B . n B 1 107 ASP 107 138 138 ASP ASP B . n B 1 108 VAL 108 139 139 VAL VAL B . n B 1 109 CYS 109 140 140 CYS CYS B . n B 1 110 GLU 110 141 141 GLU GLU B . n B 1 111 GLN 111 142 142 GLN GLN B . n B 1 112 TYR 112 143 143 TYR TYR B . n B 1 113 PRO 113 144 144 PRO PRO B . n B 1 114 PRO 114 145 145 PRO PRO B . n B 1 115 ASP 115 146 146 ASP ASP B . n B 1 116 ASP 116 147 147 ASP ASP B . n B 1 117 MET 117 148 148 MET MET B . n B 1 118 SER 118 149 149 SER SER B . n B 1 119 VAL 119 150 150 VAL VAL B . n B 1 120 TRP 120 151 151 TRP TRP B . n B 1 121 ASN 121 152 152 ASN ASN B . n B 1 122 TRP 122 153 153 TRP TRP B . n B 1 123 ASP 123 154 154 ASP ASP B . n B 1 124 ASP 124 155 ? ? ? B . n B 1 125 ASP 125 156 ? ? ? B . n B 1 126 ASP 126 157 ? ? ? B . n B 1 127 LYS 127 158 ? ? ? B . n # _pdbx_contact_author.id 3 _pdbx_contact_author.email fmarassi@sbpdiscovery.org _pdbx_contact_author.name_first Francesca _pdbx_contact_author.name_last Marassi _pdbx_contact_author.name_mi M. _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-2695-5844 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 ACT 1 201 162 ACT ACT A . F 4 HOH 1 301 162 HOH HOH A . F 4 HOH 2 302 125 HOH HOH A . F 4 HOH 3 303 148 HOH HOH A . F 4 HOH 4 304 62 HOH HOH A . F 4 HOH 5 305 92 HOH HOH A . F 4 HOH 6 306 169 HOH HOH A . F 4 HOH 7 307 86 HOH HOH A . F 4 HOH 8 308 151 HOH HOH A . F 4 HOH 9 309 63 HOH HOH A . F 4 HOH 10 310 9 HOH HOH A . F 4 HOH 11 311 120 HOH HOH A . F 4 HOH 12 312 159 HOH HOH A . F 4 HOH 13 313 79 HOH HOH A . F 4 HOH 14 314 109 HOH HOH A . F 4 HOH 15 315 52 HOH HOH A . F 4 HOH 16 316 21 HOH HOH A . F 4 HOH 17 317 34 HOH HOH A . F 4 HOH 18 318 64 HOH HOH A . F 4 HOH 19 319 126 HOH HOH A . F 4 HOH 20 320 42 HOH HOH A . F 4 HOH 21 321 18 HOH HOH A . F 4 HOH 22 322 131 HOH HOH A . F 4 HOH 23 323 2 HOH HOH A . F 4 HOH 24 324 127 HOH HOH A . F 4 HOH 25 325 46 HOH HOH A . F 4 HOH 26 326 55 HOH HOH A . F 4 HOH 27 327 44 HOH HOH A . F 4 HOH 28 328 65 HOH HOH A . F 4 HOH 29 329 43 HOH HOH A . F 4 HOH 30 330 135 HOH HOH A . F 4 HOH 31 331 130 HOH HOH A . F 4 HOH 32 332 73 HOH HOH A . F 4 HOH 33 333 3 HOH HOH A . F 4 HOH 34 334 8 HOH HOH A . F 4 HOH 35 335 119 HOH HOH A . F 4 HOH 36 336 45 HOH HOH A . F 4 HOH 37 337 50 HOH HOH A . F 4 HOH 38 338 32 HOH HOH A . F 4 HOH 39 339 51 HOH HOH A . F 4 HOH 40 340 90 HOH HOH A . F 4 HOH 41 341 7 HOH HOH A . F 4 HOH 42 342 101 HOH HOH A . F 4 HOH 43 343 56 HOH HOH A . F 4 HOH 44 344 19 HOH HOH A . F 4 HOH 45 345 48 HOH HOH A . F 4 HOH 46 346 91 HOH HOH A . F 4 HOH 47 347 72 HOH HOH A . F 4 HOH 48 348 39 HOH HOH A . F 4 HOH 49 349 37 HOH HOH A . F 4 HOH 50 350 153 HOH HOH A . F 4 HOH 51 351 4 HOH HOH A . F 4 HOH 52 352 25 HOH HOH A . F 4 HOH 53 353 105 HOH HOH A . F 4 HOH 54 354 117 HOH HOH A . F 4 HOH 55 355 60 HOH HOH A . F 4 HOH 56 356 35 HOH HOH A . F 4 HOH 57 357 156 HOH HOH A . F 4 HOH 58 358 138 HOH HOH A . F 4 HOH 59 359 98 HOH HOH A . F 4 HOH 60 360 99 HOH HOH A . F 4 HOH 61 361 40 HOH HOH A . F 4 HOH 62 362 11 HOH HOH A . F 4 HOH 63 363 27 HOH HOH A . F 4 HOH 64 364 17 HOH HOH A . F 4 HOH 65 365 38 HOH HOH A . F 4 HOH 66 366 111 HOH HOH A . F 4 HOH 67 367 133 HOH HOH A . F 4 HOH 68 368 29 HOH HOH A . F 4 HOH 69 369 49 HOH HOH A . F 4 HOH 70 370 36 HOH HOH A . F 4 HOH 71 371 137 HOH HOH A . F 4 HOH 72 372 28 HOH HOH A . F 4 HOH 73 373 95 HOH HOH A . F 4 HOH 74 374 116 HOH HOH A . F 4 HOH 75 375 71 HOH HOH A . F 4 HOH 76 376 115 HOH HOH A . F 4 HOH 77 377 146 HOH HOH A . F 4 HOH 78 378 88 HOH HOH A . F 4 HOH 79 379 85 HOH HOH A . F 4 HOH 80 380 170 HOH HOH A . F 4 HOH 81 381 103 HOH HOH A . F 4 HOH 82 382 167 HOH HOH A . F 4 HOH 83 383 150 HOH HOH A . F 4 HOH 84 384 144 HOH HOH A . F 4 HOH 85 385 168 HOH HOH A . F 4 HOH 86 386 166 HOH HOH A . F 4 HOH 87 387 89 HOH HOH A . F 4 HOH 88 388 76 HOH HOH A . F 4 HOH 89 389 124 HOH HOH A . F 4 HOH 90 390 106 HOH HOH A . F 4 HOH 91 391 114 HOH HOH A . G 4 HOH 1 201 113 HOH HOH B . G 4 HOH 2 202 61 HOH HOH B . G 4 HOH 3 203 6 HOH HOH B . G 4 HOH 4 204 123 HOH HOH B . G 4 HOH 5 205 96 HOH HOH B . G 4 HOH 6 206 149 HOH HOH B . G 4 HOH 7 207 5 HOH HOH B . G 4 HOH 8 208 31 HOH HOH B . G 4 HOH 9 209 74 HOH HOH B . G 4 HOH 10 210 23 HOH HOH B . G 4 HOH 11 211 24 HOH HOH B . G 4 HOH 12 212 58 HOH HOH B . G 4 HOH 13 213 128 HOH HOH B . G 4 HOH 14 214 26 HOH HOH B . G 4 HOH 15 215 16 HOH HOH B . G 4 HOH 16 216 77 HOH HOH B . G 4 HOH 17 217 53 HOH HOH B . G 4 HOH 18 218 70 HOH HOH B . G 4 HOH 19 219 87 HOH HOH B . G 4 HOH 20 220 102 HOH HOH B . G 4 HOH 21 221 12 HOH HOH B . G 4 HOH 22 222 33 HOH HOH B . G 4 HOH 23 223 136 HOH HOH B . G 4 HOH 24 224 41 HOH HOH B . G 4 HOH 25 225 14 HOH HOH B . G 4 HOH 26 226 15 HOH HOH B . G 4 HOH 27 227 75 HOH HOH B . G 4 HOH 28 228 158 HOH HOH B . G 4 HOH 29 229 97 HOH HOH B . G 4 HOH 30 230 147 HOH HOH B . G 4 HOH 31 231 140 HOH HOH B . G 4 HOH 32 232 66 HOH HOH B . G 4 HOH 33 233 84 HOH HOH B . G 4 HOH 34 234 78 HOH HOH B . G 4 HOH 35 235 69 HOH HOH B . G 4 HOH 36 236 20 HOH HOH B . G 4 HOH 37 237 94 HOH HOH B . G 4 HOH 38 238 47 HOH HOH B . G 4 HOH 39 239 93 HOH HOH B . G 4 HOH 40 240 1 HOH HOH B . G 4 HOH 41 241 59 HOH HOH B . G 4 HOH 42 242 68 HOH HOH B . G 4 HOH 43 243 112 HOH HOH B . G 4 HOH 44 244 141 HOH HOH B . G 4 HOH 45 245 118 HOH HOH B . G 4 HOH 46 246 80 HOH HOH B . G 4 HOH 47 247 161 HOH HOH B . G 4 HOH 48 248 163 HOH HOH B . G 4 HOH 49 249 54 HOH HOH B . G 4 HOH 50 250 142 HOH HOH B . G 4 HOH 51 251 30 HOH HOH B . G 4 HOH 52 252 108 HOH HOH B . G 4 HOH 53 253 104 HOH HOH B . G 4 HOH 54 254 110 HOH HOH B . G 4 HOH 55 255 22 HOH HOH B . G 4 HOH 56 256 81 HOH HOH B . G 4 HOH 57 257 132 HOH HOH B . G 4 HOH 58 258 129 HOH HOH B . G 4 HOH 59 259 143 HOH HOH B . G 4 HOH 60 260 107 HOH HOH B . G 4 HOH 61 261 155 HOH HOH B . G 4 HOH 62 262 134 HOH HOH B . G 4 HOH 63 263 67 HOH HOH B . G 4 HOH 64 264 152 HOH HOH B . G 4 HOH 65 265 10 HOH HOH B . G 4 HOH 66 266 154 HOH HOH B . G 4 HOH 67 267 164 HOH HOH B . G 4 HOH 68 268 100 HOH HOH B . G 4 HOH 69 269 121 HOH HOH B . G 4 HOH 70 270 13 HOH HOH B . G 4 HOH 71 271 139 HOH HOH B . G 4 HOH 72 272 57 HOH HOH B . G 4 HOH 73 273 165 HOH HOH B . G 4 HOH 74 274 82 HOH HOH B . G 4 HOH 75 275 122 HOH HOH B . G 4 HOH 76 276 145 HOH HOH B . G 4 HOH 77 277 160 HOH HOH B . G 4 HOH 78 278 83 HOH HOH B . G 4 HOH 79 279 157 HOH HOH B . # _pdbx_molecule_features.prd_id PRD_900003 _pdbx_molecule_features.name sucrose _pdbx_molecule_features.type Oligosaccharide _pdbx_molecule_features.class Nutrient _pdbx_molecule_features.details 'oligosaccharide with reducing-end-to-reducing-end glycosidic bond' # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_900003 _pdbx_molecule.asym_id C # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,E,F 2 1 B,D,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id B _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 234 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id G _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2023-08-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0352 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _pdbx_entry_details.entry_id 8DZD _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 B _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 203 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 275 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.14 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id TRP _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 119 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -154.10 _pdbx_validate_torsion.psi 86.37 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 ARG A 43 ? ? 0.114 'SIDE CHAIN' 2 1 ARG A 59 ? ? 0.105 'SIDE CHAIN' 3 1 ARG B 59 ? ? 0.086 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ALA 32 ? A ALA 1 2 1 Y 1 A ASP 155 ? A ASP 124 3 1 Y 1 A ASP 156 ? A ASP 125 4 1 Y 1 A ASP 157 ? A ASP 126 5 1 Y 1 A LYS 158 ? A LYS 127 6 1 Y 1 B ALA 32 ? B ALA 1 7 1 Y 1 B ASP 33 ? B ASP 2 8 1 Y 1 B ASP 155 ? B ASP 124 9 1 Y 1 B ASP 156 ? B ASP 125 10 1 Y 1 B ASP 157 ? B ASP 126 11 1 Y 1 B LYS 158 ? B LYS 127 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' ? 1 'National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)' 'United States' ? 2 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero C 2 GLC 1 C GLC 1 A GLC 160 n C 2 FRU 2 C FRU 2 A FRU 161 n D 2 GLC 1 D GLC 1 B GLC 160 n D 2 FRU 2 D FRU 2 B FRU 161 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier FRU 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DFrufb FRU 'COMMON NAME' GMML 1.0 b-D-fructofuranose FRU 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Fruf FRU 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Fru GLC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpa GLC 'COMMON NAME' GMML 1.0 a-D-glucopyranose GLC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Glcp GLC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Glc # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DFrufb2-1DGlcpa 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/2,2,1/[ha122h-2b_2-5][a2122h-1a_1-5]/1-2/a2-b1' WURCS PDB2Glycan 1.1.0 3 2 '[][b-D-Fruf]{[(2+1)][a-D-Glcp]{}}' LINUCS PDB-CARE ? # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 1 _pdbx_entity_branch_link.comp_id_1 GLC _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.entity_branch_list_num_2 2 _pdbx_entity_branch_link.comp_id_2 FRU _pdbx_entity_branch_link.atom_id_2 O2 _pdbx_entity_branch_link.leaving_atom_id_2 HO2 _pdbx_entity_branch_link.value_order sing _pdbx_entity_branch_link.details ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 GLC 1 n 2 FRU 2 n # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 FRU ? ? FRU ? ? 'SUBJECT OF INVESTIGATION' ? 2 GLC ? ? GLC ? ? 'SUBJECT OF INVESTIGATION' ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'ACETATE ION' ACT 4 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #