HEADER RNA BINDING PROTEIN/RNA/DNA 07-AUG-22 8DZJ TITLE CRYO-EM STRUCTURE OF ACIDIBACILLUS SULFUROXIDANS CAS12F IN COMPLEX TITLE 2 WITH SGRNA AND TARGET DNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: ORFB_ZN_RIBBON DOMAIN-CONTAINING PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ASCAS12F; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: TARGET DNA STRAND; COMPND 8 CHAIN: C; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: NON-TARGET DNA STRAND; COMPND 12 CHAIN: D; COMPND 13 ENGINEERED: YES; COMPND 14 MOL_ID: 4; COMPND 15 MOLECULE: SGRNA; COMPND 16 CHAIN: E; COMPND 17 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ACIDIBACILLUS SULFUROXIDANS; SOURCE 3 ORGANISM_TAXID: 1765684; SOURCE 4 GENE: BM613_13600; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 SYNTHETIC: YES; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 MOL_ID: 3; SOURCE 13 SYNTHETIC: YES; SOURCE 14 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 15 ORGANISM_COMMON: HUMAN; SOURCE 16 ORGANISM_TAXID: 9606; SOURCE 17 MOL_ID: 4; SOURCE 18 SYNTHETIC: YES; SOURCE 19 ORGANISM_SCIENTIFIC: ACIDIBACILLUS SULFUROXIDANS; SOURCE 20 ORGANISM_TAXID: 1765684 KEYWDS CRISPR, CAS12, GENE EDITING, RNA BINDING PROTEIN-RNA-DNA COMPLEX EXPDTA ELECTRON MICROSCOPY AUTHOR C.LIU,M.ZHAO REVDAT 2 08-NOV-23 8DZJ 1 JRNL REVDAT 1 12-JUL-23 8DZJ 0 JRNL AUTH T.WU,C.LIU,S.ZOU,R.LYU,B.YANG,H.YAN,M.ZHAO,W.TANG JRNL TITL AN ENGINEERED HYPERCOMPACT CRISPR-CAS12F SYSTEM WITH BOOSTED JRNL TITL 2 GENE-EDITING ACTIVITY. JRNL REF NAT.CHEM.BIOL. V. 19 1384 2023 JRNL REFN ESSN 1552-4469 JRNL PMID 37400536 JRNL DOI 10.1038/S41589-023-01380-9 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : RELION REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 2.900 REMARK 3 NUMBER OF PARTICLES : 490190 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING ONLY REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 8DZJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-AUG-22. REMARK 100 THE DEPOSITION ID IS D_1000267566. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : ASCAS12F-SGRNA-DNA REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 8.00 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 BIOQUANTUM (6K X REMARK 245 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1000.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2500.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 5000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -23 REMARK 465 ALA A -22 REMARK 465 HIS A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 SER A -15 REMARK 465 ALA A -14 REMARK 465 ALA A -13 REMARK 465 LEU A -12 REMARK 465 GLU A -11 REMARK 465 VAL A -10 REMARK 465 LEU A -9 REMARK 465 PHE A -8 REMARK 465 GLN A -7 REMARK 465 GLY A -6 REMARK 465 PRO A -5 REMARK 465 GLY A -4 REMARK 465 TYR A -3 REMARK 465 GLN A -2 REMARK 465 ASP A -1 REMARK 465 GLN A 212 REMARK 465 THR A 213 REMARK 465 ARG A 214 REMARK 465 VAL A 215 REMARK 465 LEU A 216 REMARK 465 ASP A 217 REMARK 465 LEU A 218 REMARK 465 MET B -23 REMARK 465 ALA B -22 REMARK 465 HIS B -21 REMARK 465 HIS B -20 REMARK 465 HIS B -19 REMARK 465 HIS B -18 REMARK 465 HIS B -17 REMARK 465 HIS B -16 REMARK 465 SER B -15 REMARK 465 ALA B -14 REMARK 465 ALA B -13 REMARK 465 LEU B -12 REMARK 465 GLU B -11 REMARK 465 VAL B -10 REMARK 465 LEU B -9 REMARK 465 PHE B -8 REMARK 465 GLN B -7 REMARK 465 GLY B -6 REMARK 465 PRO B -5 REMARK 465 GLY B -4 REMARK 465 TYR B -3 REMARK 465 GLN B -2 REMARK 465 ASP B -1 REMARK 465 PRO B 0 REMARK 465 MET B 1 REMARK 465 ILE B 2 REMARK 465 ASP B 54 REMARK 465 ASN B 55 REMARK 465 HIS B 56 REMARK 465 GLY B 57 REMARK 465 GLU B 58 REMARK 465 TYR B 59 REMARK 465 PRO B 60 REMARK 465 LYS B 61 REMARK 465 SER B 62 REMARK 465 LYS B 63 REMARK 465 ASP B 64 REMARK 465 PRO B 211 REMARK 465 GLN B 212 REMARK 465 THR B 213 REMARK 465 ARG B 214 REMARK 465 VAL B 215 REMARK 465 LEU B 216 REMARK 465 ASP B 217 REMARK 465 LEU B 218 REMARK 465 ASN B 219 REMARK 465 LYS B 220 REMARK 465 ILE B 221 REMARK 465 MET B 222 REMARK 465 GLY B 223 REMARK 465 ILE B 224 REMARK 465 ALA B 225 REMARK 465 LEU B 226 REMARK 465 GLY B 227 REMARK 465 VAL B 228 REMARK 465 ALA B 229 REMARK 465 VAL B 230 REMARK 465 ALA B 231 REMARK 465 VAL B 232 REMARK 465 TYR B 233 REMARK 465 MET B 234 REMARK 465 ALA B 235 REMARK 465 PHE B 236 REMARK 465 GLN B 237 REMARK 465 HIS B 238 REMARK 465 THR B 239 REMARK 465 PRO B 240 REMARK 465 ALA B 241 REMARK 465 ARG B 242 REMARK 465 TYR B 243 REMARK 465 LYS B 244 REMARK 465 LEU B 245 REMARK 465 GLU B 246 REMARK 465 GLY B 247 REMARK 465 GLY B 248 REMARK 465 GLU B 249 REMARK 465 ILE B 250 REMARK 465 GLU B 251 REMARK 465 ASN B 252 REMARK 465 PHE B 253 REMARK 465 ARG B 254 REMARK 465 ARG B 255 REMARK 465 GLN B 256 REMARK 465 VAL B 257 REMARK 465 GLU B 258 REMARK 465 SER B 259 REMARK 465 ARG B 260 REMARK 465 ARG B 261 REMARK 465 ILE B 262 REMARK 465 SER B 263 REMARK 465 MET B 264 REMARK 465 LEU B 265 REMARK 465 ARG B 266 REMARK 465 GLN B 267 REMARK 465 GLY B 268 REMARK 465 LYS B 269 REMARK 465 TYR B 270 REMARK 465 ALA B 271 REMARK 465 GLY B 272 REMARK 465 GLY B 273 REMARK 465 ALA B 274 REMARK 465 ARG B 275 REMARK 465 GLY B 276 REMARK 465 GLY B 277 REMARK 465 HIS B 278 REMARK 465 GLY B 279 REMARK 465 ARG B 280 REMARK 465 ASP B 281 REMARK 465 LYS B 282 REMARK 465 ARG B 283 REMARK 465 ILE B 284 REMARK 465 LYS B 285 REMARK 465 PRO B 286 REMARK 465 ILE B 287 REMARK 465 GLU B 288 REMARK 465 GLN B 289 REMARK 465 LEU B 290 REMARK 465 ARG B 291 REMARK 465 ASP B 292 REMARK 465 LYS B 293 REMARK 465 ILE B 294 REMARK 465 ALA B 295 REMARK 465 ASN B 296 REMARK 465 PHE B 297 REMARK 465 ARG B 298 REMARK 465 ASP B 299 REMARK 465 THR B 300 REMARK 465 THR B 301 REMARK 465 ASN B 302 REMARK 465 HIS B 303 REMARK 465 ARG B 304 REMARK 465 TYR B 305 REMARK 465 SER B 306 REMARK 465 ARG B 307 REMARK 465 TYR B 308 REMARK 465 ILE B 309 REMARK 465 VAL B 310 REMARK 465 ASP B 311 REMARK 465 MET B 312 REMARK 465 ALA B 313 REMARK 465 ILE B 314 REMARK 465 LYS B 315 REMARK 465 GLU B 316 REMARK 465 GLY B 317 REMARK 465 CYS B 318 REMARK 465 GLY B 319 REMARK 465 THR B 320 REMARK 465 ILE B 321 REMARK 465 GLN B 322 REMARK 465 MET B 323 REMARK 465 GLU B 324 REMARK 465 ASP B 325 REMARK 465 LEU B 326 REMARK 465 THR B 327 REMARK 465 ASN B 328 REMARK 465 ILE B 329 REMARK 465 ARG B 330 REMARK 465 ASP B 331 REMARK 465 ILE B 332 REMARK 465 GLY B 333 REMARK 465 SER B 334 REMARK 465 ARG B 335 REMARK 465 PHE B 336 REMARK 465 LEU B 337 REMARK 465 GLN B 338 REMARK 465 ASN B 339 REMARK 465 TRP B 340 REMARK 465 THR B 341 REMARK 465 TYR B 342 REMARK 465 TYR B 343 REMARK 465 ASP B 344 REMARK 465 LEU B 345 REMARK 465 GLN B 346 REMARK 465 GLN B 347 REMARK 465 LYS B 348 REMARK 465 ILE B 349 REMARK 465 ILE B 350 REMARK 465 TYR B 351 REMARK 465 LYS B 352 REMARK 465 ALA B 353 REMARK 465 GLU B 354 REMARK 465 GLU B 355 REMARK 465 ALA B 356 REMARK 465 GLY B 357 REMARK 465 ILE B 358 REMARK 465 LYS B 359 REMARK 465 VAL B 360 REMARK 465 ILE B 361 REMARK 465 LYS B 362 REMARK 465 ILE B 363 REMARK 465 ASP B 364 REMARK 465 PRO B 365 REMARK 465 GLN B 366 REMARK 465 TYR B 367 REMARK 465 THR B 368 REMARK 465 SER B 369 REMARK 465 GLN B 370 REMARK 465 ARG B 371 REMARK 465 CYS B 372 REMARK 465 SER B 373 REMARK 465 GLU B 374 REMARK 465 CYS B 375 REMARK 465 GLY B 376 REMARK 465 ASN B 377 REMARK 465 ILE B 378 REMARK 465 ASP B 379 REMARK 465 SER B 380 REMARK 465 GLY B 381 REMARK 465 ASN B 382 REMARK 465 ARG B 383 REMARK 465 ILE B 384 REMARK 465 GLY B 385 REMARK 465 GLN B 386 REMARK 465 ALA B 387 REMARK 465 ILE B 388 REMARK 465 PHE B 389 REMARK 465 LYS B 390 REMARK 465 CYS B 391 REMARK 465 ARG B 392 REMARK 465 ALA B 393 REMARK 465 CYS B 394 REMARK 465 GLY B 395 REMARK 465 TYR B 396 REMARK 465 GLU B 397 REMARK 465 ALA B 398 REMARK 465 ASN B 399 REMARK 465 ALA B 400 REMARK 465 ASP B 401 REMARK 465 TYR B 402 REMARK 465 ASN B 403 REMARK 465 ALA B 404 REMARK 465 ALA B 405 REMARK 465 ARG B 406 REMARK 465 ASN B 407 REMARK 465 ILE B 408 REMARK 465 ALA B 409 REMARK 465 ILE B 410 REMARK 465 PRO B 411 REMARK 465 ASN B 412 REMARK 465 ILE B 413 REMARK 465 ASP B 414 REMARK 465 LYS B 415 REMARK 465 ILE B 416 REMARK 465 ILE B 417 REMARK 465 ALA B 418 REMARK 465 GLU B 419 REMARK 465 SER B 420 REMARK 465 ILE B 421 REMARK 465 LYS B 422 REMARK 465 DT C 1 REMARK 465 DT C 2 REMARK 465 DC C 3 REMARK 465 DC C 4 REMARK 465 DG C 5 REMARK 465 DG C 6 REMARK 465 DC C 7 REMARK 465 DC C 8 REMARK 465 DT C 9 REMARK 465 DG C 10 REMARK 465 DG C 11 REMARK 465 DT C 39 REMARK 465 DT C 40 REMARK 465 DT C 41 REMARK 465 DT C 42 REMARK 465 DA D 1 REMARK 465 DA D 2 REMARK 465 DA D 3 REMARK 465 DA D 4 REMARK 465 DC D 15 REMARK 465 DT D 16 REMARK 465 DC D 17 REMARK 465 DT D 18 REMARK 465 DC D 19 REMARK 465 DA D 20 REMARK 465 DA D 21 REMARK 465 DG D 22 REMARK 465 DA D 23 REMARK 465 DC D 24 REMARK 465 DC D 25 REMARK 465 DC D 26 REMARK 465 DA D 27 REMARK 465 DC D 28 REMARK 465 DA D 29 REMARK 465 DA D 30 REMARK 465 DT D 31 REMARK 465 DC D 32 REMARK 465 DC D 33 REMARK 465 DA D 34 REMARK 465 DG D 35 REMARK 465 DG D 36 REMARK 465 DC D 37 REMARK 465 DC D 38 REMARK 465 DG D 39 REMARK 465 DG D 40 REMARK 465 DA D 41 REMARK 465 DA D 42 REMARK 465 G E 1 REMARK 465 G E 2 REMARK 465 A E 3 REMARK 465 U E 4 REMARK 465 U E 127 REMARK 465 A E 128 REMARK 465 U E 129 REMARK 465 A E 130 REMARK 465 G E 131 REMARK 465 C E 132 REMARK 465 U E 133 REMARK 465 C E 134 REMARK 465 A E 135 REMARK 465 U E 136 REMARK 465 A E 137 REMARK 465 A E 138 REMARK 465 A E 139 REMARK 465 C E 140 REMARK 465 A E 141 REMARK 465 A E 142 REMARK 465 G E 143 REMARK 465 G E 144 REMARK 465 G E 145 REMARK 465 U E 146 REMARK 465 U E 147 REMARK 465 U E 148 REMARK 465 G E 149 REMARK 465 C E 150 REMARK 465 G E 151 REMARK 465 A E 152 REMARK 465 G E 153 REMARK 465 C E 154 REMARK 465 U E 155 REMARK 465 A E 156 REMARK 465 G E 157 REMARK 465 C E 158 REMARK 465 U E 159 REMARK 465 C E 191 REMARK 465 C E 192 REMARK 465 A E 193 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 219 CG OD1 ND2 REMARK 470 LYS B 120 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 281 -7.48 72.22 REMARK 500 ARG A 283 -0.03 79.24 REMARK 500 SER B 115 -127.28 69.68 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 372 SG REMARK 620 2 CYS A 375 SG 99.4 REMARK 620 3 CYS A 391 SG 86.9 87.6 REMARK 620 4 CYS A 394 SG 123.0 118.2 132.3 REMARK 620 N 1 2 3 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-27801 RELATED DB: EMDB REMARK 900 CRYO-EM STRUCTURE OF ACIDIBACILLUS SULFUROXIDANS CAS12F IN COMPLEX REMARK 900 WITH SGRNA AND TARGET DNA DBREF1 8DZJ A 1 422 UNP A0A2U3D0N8_9BACL DBREF2 8DZJ A A0A2U3D0N8 1 422 DBREF1 8DZJ B 1 422 UNP A0A2U3D0N8_9BACL DBREF2 8DZJ B A0A2U3D0N8 1 422 DBREF 8DZJ C 1 42 PDB 8DZJ 8DZJ 1 42 DBREF 8DZJ D 1 42 PDB 8DZJ 8DZJ 1 42 DBREF 8DZJ E 1 193 PDB 8DZJ 8DZJ 1 193 SEQADV 8DZJ MET A -23 UNP A0A2U3D0N EXPRESSION TAG SEQADV 8DZJ ALA A -22 UNP A0A2U3D0N EXPRESSION TAG SEQADV 8DZJ HIS A -21 UNP A0A2U3D0N EXPRESSION TAG SEQADV 8DZJ HIS A -20 UNP A0A2U3D0N EXPRESSION TAG SEQADV 8DZJ HIS A -19 UNP A0A2U3D0N EXPRESSION TAG SEQADV 8DZJ HIS A -18 UNP A0A2U3D0N EXPRESSION TAG SEQADV 8DZJ HIS A -17 UNP A0A2U3D0N EXPRESSION TAG SEQADV 8DZJ HIS A -16 UNP A0A2U3D0N EXPRESSION TAG SEQADV 8DZJ SER A -15 UNP A0A2U3D0N EXPRESSION TAG SEQADV 8DZJ ALA A -14 UNP A0A2U3D0N EXPRESSION TAG SEQADV 8DZJ ALA A -13 UNP A0A2U3D0N EXPRESSION TAG SEQADV 8DZJ LEU A -12 UNP A0A2U3D0N EXPRESSION TAG SEQADV 8DZJ GLU A -11 UNP A0A2U3D0N EXPRESSION TAG SEQADV 8DZJ VAL A -10 UNP A0A2U3D0N EXPRESSION TAG SEQADV 8DZJ LEU A -9 UNP A0A2U3D0N EXPRESSION TAG SEQADV 8DZJ PHE A -8 UNP A0A2U3D0N EXPRESSION TAG SEQADV 8DZJ GLN A -7 UNP A0A2U3D0N EXPRESSION TAG SEQADV 8DZJ GLY A -6 UNP A0A2U3D0N EXPRESSION TAG SEQADV 8DZJ PRO A -5 UNP A0A2U3D0N EXPRESSION TAG SEQADV 8DZJ GLY A -4 UNP A0A2U3D0N EXPRESSION TAG SEQADV 8DZJ TYR A -3 UNP A0A2U3D0N EXPRESSION TAG SEQADV 8DZJ GLN A -2 UNP A0A2U3D0N EXPRESSION TAG SEQADV 8DZJ ASP A -1 UNP A0A2U3D0N EXPRESSION TAG SEQADV 8DZJ PRO A 0 UNP A0A2U3D0N EXPRESSION TAG SEQADV 8DZJ ALA A 225 UNP A0A2U3D0N ASP 225 CONFLICT SEQADV 8DZJ MET B -23 UNP A0A2U3D0N EXPRESSION TAG SEQADV 8DZJ ALA B -22 UNP A0A2U3D0N EXPRESSION TAG SEQADV 8DZJ HIS B -21 UNP A0A2U3D0N EXPRESSION TAG SEQADV 8DZJ HIS B -20 UNP A0A2U3D0N EXPRESSION TAG SEQADV 8DZJ HIS B -19 UNP A0A2U3D0N EXPRESSION TAG SEQADV 8DZJ HIS B -18 UNP A0A2U3D0N EXPRESSION TAG SEQADV 8DZJ HIS B -17 UNP A0A2U3D0N EXPRESSION TAG SEQADV 8DZJ HIS B -16 UNP A0A2U3D0N EXPRESSION TAG SEQADV 8DZJ SER B -15 UNP A0A2U3D0N EXPRESSION TAG SEQADV 8DZJ ALA B -14 UNP A0A2U3D0N EXPRESSION TAG SEQADV 8DZJ ALA B -13 UNP A0A2U3D0N EXPRESSION TAG SEQADV 8DZJ LEU B -12 UNP A0A2U3D0N EXPRESSION TAG SEQADV 8DZJ GLU B -11 UNP A0A2U3D0N EXPRESSION TAG SEQADV 8DZJ VAL B -10 UNP A0A2U3D0N EXPRESSION TAG SEQADV 8DZJ LEU B -9 UNP A0A2U3D0N EXPRESSION TAG SEQADV 8DZJ PHE B -8 UNP A0A2U3D0N EXPRESSION TAG SEQADV 8DZJ GLN B -7 UNP A0A2U3D0N EXPRESSION TAG SEQADV 8DZJ GLY B -6 UNP A0A2U3D0N EXPRESSION TAG SEQADV 8DZJ PRO B -5 UNP A0A2U3D0N EXPRESSION TAG SEQADV 8DZJ GLY B -4 UNP A0A2U3D0N EXPRESSION TAG SEQADV 8DZJ TYR B -3 UNP A0A2U3D0N EXPRESSION TAG SEQADV 8DZJ GLN B -2 UNP A0A2U3D0N EXPRESSION TAG SEQADV 8DZJ ASP B -1 UNP A0A2U3D0N EXPRESSION TAG SEQADV 8DZJ PRO B 0 UNP A0A2U3D0N EXPRESSION TAG SEQADV 8DZJ ALA B 225 UNP A0A2U3D0N ASP 225 CONFLICT SEQRES 1 A 446 MET ALA HIS HIS HIS HIS HIS HIS SER ALA ALA LEU GLU SEQRES 2 A 446 VAL LEU PHE GLN GLY PRO GLY TYR GLN ASP PRO MET ILE SEQRES 3 A 446 LYS VAL TYR ARG TYR GLU ILE VAL LYS PRO LEU ASP LEU SEQRES 4 A 446 ASP TRP LYS GLU PHE GLY THR ILE LEU ARG GLN LEU GLN SEQRES 5 A 446 GLN GLU THR ARG PHE ALA LEU ASN LYS ALA THR GLN LEU SEQRES 6 A 446 ALA TRP GLU TRP MET GLY PHE SER SER ASP TYR LYS ASP SEQRES 7 A 446 ASN HIS GLY GLU TYR PRO LYS SER LYS ASP ILE LEU GLY SEQRES 8 A 446 TYR THR ASN VAL HIS GLY TYR ALA TYR HIS THR ILE LYS SEQRES 9 A 446 THR LYS ALA TYR ARG LEU ASN SER GLY ASN LEU SER GLN SEQRES 10 A 446 THR ILE LYS ARG ALA THR ASP ARG PHE LYS ALA TYR GLN SEQRES 11 A 446 LYS GLU ILE LEU ARG GLY ASP MET SER ILE PRO SER TYR SEQRES 12 A 446 LYS ARG ASP ILE PRO LEU ASP LEU ILE LYS GLU ASN ILE SEQRES 13 A 446 SER VAL ASN ARG MET ASN HIS GLY ASP TYR ILE ALA SER SEQRES 14 A 446 LEU SER LEU LEU SER ASN PRO ALA LYS GLN GLU MET ASN SEQRES 15 A 446 VAL LYS ARG LYS ILE SER VAL ILE ILE ILE VAL ARG GLY SEQRES 16 A 446 ALA GLY LYS THR ILE MET ASP ARG ILE LEU SER GLY GLU SEQRES 17 A 446 TYR GLN VAL SER ALA SER GLN ILE ILE HIS ASP ASP ARG SEQRES 18 A 446 LYS ASN LYS TRP TYR LEU ASN ILE SER TYR ASP PHE GLU SEQRES 19 A 446 PRO GLN THR ARG VAL LEU ASP LEU ASN LYS ILE MET GLY SEQRES 20 A 446 ILE ALA LEU GLY VAL ALA VAL ALA VAL TYR MET ALA PHE SEQRES 21 A 446 GLN HIS THR PRO ALA ARG TYR LYS LEU GLU GLY GLY GLU SEQRES 22 A 446 ILE GLU ASN PHE ARG ARG GLN VAL GLU SER ARG ARG ILE SEQRES 23 A 446 SER MET LEU ARG GLN GLY LYS TYR ALA GLY GLY ALA ARG SEQRES 24 A 446 GLY GLY HIS GLY ARG ASP LYS ARG ILE LYS PRO ILE GLU SEQRES 25 A 446 GLN LEU ARG ASP LYS ILE ALA ASN PHE ARG ASP THR THR SEQRES 26 A 446 ASN HIS ARG TYR SER ARG TYR ILE VAL ASP MET ALA ILE SEQRES 27 A 446 LYS GLU GLY CYS GLY THR ILE GLN MET GLU ASP LEU THR SEQRES 28 A 446 ASN ILE ARG ASP ILE GLY SER ARG PHE LEU GLN ASN TRP SEQRES 29 A 446 THR TYR TYR ASP LEU GLN GLN LYS ILE ILE TYR LYS ALA SEQRES 30 A 446 GLU GLU ALA GLY ILE LYS VAL ILE LYS ILE ASP PRO GLN SEQRES 31 A 446 TYR THR SER GLN ARG CYS SER GLU CYS GLY ASN ILE ASP SEQRES 32 A 446 SER GLY ASN ARG ILE GLY GLN ALA ILE PHE LYS CYS ARG SEQRES 33 A 446 ALA CYS GLY TYR GLU ALA ASN ALA ASP TYR ASN ALA ALA SEQRES 34 A 446 ARG ASN ILE ALA ILE PRO ASN ILE ASP LYS ILE ILE ALA SEQRES 35 A 446 GLU SER ILE LYS SEQRES 1 B 446 MET ALA HIS HIS HIS HIS HIS HIS SER ALA ALA LEU GLU SEQRES 2 B 446 VAL LEU PHE GLN GLY PRO GLY TYR GLN ASP PRO MET ILE SEQRES 3 B 446 LYS VAL TYR ARG TYR GLU ILE VAL LYS PRO LEU ASP LEU SEQRES 4 B 446 ASP TRP LYS GLU PHE GLY THR ILE LEU ARG GLN LEU GLN SEQRES 5 B 446 GLN GLU THR ARG PHE ALA LEU ASN LYS ALA THR GLN LEU SEQRES 6 B 446 ALA TRP GLU TRP MET GLY PHE SER SER ASP TYR LYS ASP SEQRES 7 B 446 ASN HIS GLY GLU TYR PRO LYS SER LYS ASP ILE LEU GLY SEQRES 8 B 446 TYR THR ASN VAL HIS GLY TYR ALA TYR HIS THR ILE LYS SEQRES 9 B 446 THR LYS ALA TYR ARG LEU ASN SER GLY ASN LEU SER GLN SEQRES 10 B 446 THR ILE LYS ARG ALA THR ASP ARG PHE LYS ALA TYR GLN SEQRES 11 B 446 LYS GLU ILE LEU ARG GLY ASP MET SER ILE PRO SER TYR SEQRES 12 B 446 LYS ARG ASP ILE PRO LEU ASP LEU ILE LYS GLU ASN ILE SEQRES 13 B 446 SER VAL ASN ARG MET ASN HIS GLY ASP TYR ILE ALA SER SEQRES 14 B 446 LEU SER LEU LEU SER ASN PRO ALA LYS GLN GLU MET ASN SEQRES 15 B 446 VAL LYS ARG LYS ILE SER VAL ILE ILE ILE VAL ARG GLY SEQRES 16 B 446 ALA GLY LYS THR ILE MET ASP ARG ILE LEU SER GLY GLU SEQRES 17 B 446 TYR GLN VAL SER ALA SER GLN ILE ILE HIS ASP ASP ARG SEQRES 18 B 446 LYS ASN LYS TRP TYR LEU ASN ILE SER TYR ASP PHE GLU SEQRES 19 B 446 PRO GLN THR ARG VAL LEU ASP LEU ASN LYS ILE MET GLY SEQRES 20 B 446 ILE ALA LEU GLY VAL ALA VAL ALA VAL TYR MET ALA PHE SEQRES 21 B 446 GLN HIS THR PRO ALA ARG TYR LYS LEU GLU GLY GLY GLU SEQRES 22 B 446 ILE GLU ASN PHE ARG ARG GLN VAL GLU SER ARG ARG ILE SEQRES 23 B 446 SER MET LEU ARG GLN GLY LYS TYR ALA GLY GLY ALA ARG SEQRES 24 B 446 GLY GLY HIS GLY ARG ASP LYS ARG ILE LYS PRO ILE GLU SEQRES 25 B 446 GLN LEU ARG ASP LYS ILE ALA ASN PHE ARG ASP THR THR SEQRES 26 B 446 ASN HIS ARG TYR SER ARG TYR ILE VAL ASP MET ALA ILE SEQRES 27 B 446 LYS GLU GLY CYS GLY THR ILE GLN MET GLU ASP LEU THR SEQRES 28 B 446 ASN ILE ARG ASP ILE GLY SER ARG PHE LEU GLN ASN TRP SEQRES 29 B 446 THR TYR TYR ASP LEU GLN GLN LYS ILE ILE TYR LYS ALA SEQRES 30 B 446 GLU GLU ALA GLY ILE LYS VAL ILE LYS ILE ASP PRO GLN SEQRES 31 B 446 TYR THR SER GLN ARG CYS SER GLU CYS GLY ASN ILE ASP SEQRES 32 B 446 SER GLY ASN ARG ILE GLY GLN ALA ILE PHE LYS CYS ARG SEQRES 33 B 446 ALA CYS GLY TYR GLU ALA ASN ALA ASP TYR ASN ALA ALA SEQRES 34 B 446 ARG ASN ILE ALA ILE PRO ASN ILE ASP LYS ILE ILE ALA SEQRES 35 B 446 GLU SER ILE LYS SEQRES 1 C 42 DT DT DC DC DG DG DC DC DT DG DG DA DT SEQRES 2 C 42 DT DG DT DG DG DG DT DC DT DT DG DA DG SEQRES 3 C 42 DA DG DC DA DA DA DA DA DC DC DT DG DT SEQRES 4 C 42 DT DT DT SEQRES 1 D 42 DA DA DA DA DC DA DG DG DT DT DT DT DT SEQRES 2 D 42 DG DC DT DC DT DC DA DA DG DA DC DC DC SEQRES 3 D 42 DA DC DA DA DT DC DC DA DG DG DC DC DG SEQRES 4 D 42 DG DA DA SEQRES 1 E 193 G G A U U C G U C G G U U SEQRES 2 E 193 C A G C G A C G A U A A G SEQRES 3 E 193 C C G A G A A G U G C C A SEQRES 4 E 193 A U A A A A C U G U U A A SEQRES 5 E 193 G U G G U U U G G U A A C SEQRES 6 E 193 G C U C G G U A A G G U A SEQRES 7 E 193 G C C A A A A G G C U G A SEQRES 8 E 193 A A C U C C G U G C A C A SEQRES 9 E 193 A A G A C C G C A C G G A SEQRES 10 E 193 C G C U U C A C A U A U A SEQRES 11 E 193 G C U C A U A A A C A A G SEQRES 12 E 193 G G U U U G C G A G C U A SEQRES 13 E 193 G C U U G U G G A G U G U SEQRES 14 E 193 G A A C C U C U C A A G A SEQRES 15 E 193 C C C A C A A U C C A HET ZN A 501 1 HETNAM ZN ZINC ION FORMUL 6 ZN ZN 2+ HELIX 1 AA1 ASP A 16 GLY A 57 1 42 HELIX 2 AA2 LYS A 61 LEU A 66 1 6 HELIX 3 AA3 ASN A 70 LYS A 80 1 11 HELIX 4 AA4 ASN A 87 TYR A 105 1 19 HELIX 5 AA5 TYR A 105 ARG A 111 1 7 HELIX 6 AA6 ILE A 128 GLU A 130 5 3 HELIX 7 AA7 SER A 150 MET A 157 1 8 HELIX 8 AA8 ARG A 170 SER A 182 1 13 HELIX 9 AA9 GLY A 247 TYR A 270 1 24 HELIX 10 AB1 GLY A 272 HIS A 278 1 7 HELIX 11 AB2 ILE A 284 GLU A 316 1 33 HELIX 12 AB3 ASP A 325 ARG A 330 1 6 HELIX 13 AB4 THR A 341 GLY A 357 1 17 HELIX 14 AB5 ALA A 400 ILE A 410 1 11 HELIX 15 AB6 ASN A 412 LYS A 422 1 11 HELIX 16 AB7 ASP B 16 MET B 46 1 31 HELIX 17 AB8 ASN B 70 LYS B 80 1 11 HELIX 18 AB9 ASN B 87 ARG B 111 1 25 HELIX 19 AC1 ILE B 128 GLU B 130 5 3 HELIX 20 AC2 SER B 150 ASN B 158 1 9 HELIX 21 AC3 GLY B 171 GLY B 183 1 13 SHEET 1 AA1 7 LEU A 125 LEU A 127 0 SHEET 2 AA1 7 GLN A 186 ASP A 195 -1 O ILE A 192 N LEU A 125 SHEET 3 AA1 7 LYS A 200 PHE A 209 -1 O SER A 206 N SER A 188 SHEET 4 AA1 7 MET A 1 LEU A 13 -1 N ILE A 9 O TRP A 201 SHEET 5 AA1 7 ILE A 163 ILE A 168 -1 O SER A 164 N LEU A 13 SHEET 6 AA1 7 TYR A 142 LEU A 146 -1 N LEU A 146 O ILE A 163 SHEET 7 AA1 7 ILE A 132 ARG A 136 -1 N ASN A 135 O ILE A 143 SHEET 1 AA2 5 ARG A 242 LEU A 245 0 SHEET 2 AA2 5 VAL A 232 PHE A 236 -1 N VAL A 232 O LEU A 245 SHEET 3 AA2 5 ILE A 221 ALA A 225 -1 N ALA A 225 O TYR A 233 SHEET 4 AA2 5 THR A 320 GLU A 324 1 O GLN A 322 N MET A 222 SHEET 5 AA2 5 LYS A 359 ILE A 363 1 O ILE A 361 N ILE A 321 SHEET 1 AA3 2 ILE A 388 CYS A 391 0 SHEET 2 AA3 2 TYR A 396 ASN A 399 -1 O ALA A 398 N PHE A 389 SHEET 1 AA4 7 LEU B 125 LEU B 127 0 SHEET 2 AA4 7 SER B 190 ASP B 195 -1 O SER B 190 N LEU B 127 SHEET 3 AA4 7 LYS B 200 ASP B 208 -1 O LYS B 200 N ASP B 195 SHEET 4 AA4 7 VAL B 4 PRO B 12 -1 N TYR B 7 O LEU B 203 SHEET 5 AA4 7 LYS B 162 ILE B 167 -1 O ILE B 166 N LYS B 11 SHEET 6 AA4 7 TYR B 142 SER B 147 -1 N ALA B 144 O VAL B 165 SHEET 7 AA4 7 ILE B 132 ARG B 136 -1 N ASN B 135 O ILE B 143 SHEET 1 AA5 4 LEU B 125 LEU B 127 0 SHEET 2 AA5 4 SER B 190 ASP B 195 -1 O SER B 190 N LEU B 127 SHEET 3 AA5 4 LYS B 200 ASP B 208 -1 O LYS B 200 N ASP B 195 SHEET 4 AA5 4 GLN B 186 VAL B 187 -1 N GLN B 186 O ASP B 208 LINK SG CYS A 372 ZN ZN A 501 1555 1555 2.83 LINK SG CYS A 375 ZN ZN A 501 1555 1555 2.30 LINK SG CYS A 391 ZN ZN A 501 1555 1555 2.30 LINK SG CYS A 394 ZN ZN A 501 1555 1555 2.30 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000