HEADER SIGNALING PROTEIN 08-AUG-22 8E0B TITLE CRYSTAL STRUCTURE OF HUMAN SAR1BT39N COMPND MOL_ID: 1; COMPND 2 MOLECULE: SAR1BT39N; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SAR1B, GDP, COPII, SMALL GTPASE, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Q.HUANG REVDAT 2 28-FEB-24 8E0B 1 JRNL REVDAT 1 16-AUG-23 8E0B 0 JRNL AUTH Q.HUANG,D.M.E.SZEBENYI JRNL TITL THE ALARMONE PPGPP SELECTIVELY INHIBITS THE ISOFORM A OF THE JRNL TITL 2 HUMAN SMALL GTPASE SAR1. JRNL REF PROTEINS V. 91 518 2023 JRNL REFN ESSN 1097-0134 JRNL PMID 36369712 JRNL DOI 10.1002/PROT.26445 REMARK 2 REMARK 2 RESOLUTION. 2.21 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.21 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.17 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.8 REMARK 3 NUMBER OF REFLECTIONS : 20461 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.174 REMARK 3 FREE R VALUE : 0.237 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.770 REMARK 3 FREE R VALUE TEST SET COUNT : 1999 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.1660 - 5.3264 0.99 1462 158 0.1778 0.2160 REMARK 3 2 5.3264 - 4.2298 1.00 1440 156 0.1367 0.1819 REMARK 3 3 4.2298 - 3.6957 1.00 1425 155 0.1375 0.2157 REMARK 3 4 3.6957 - 3.3581 1.00 1419 153 0.1553 0.2173 REMARK 3 5 3.3581 - 3.1175 1.00 1416 153 0.1580 0.2300 REMARK 3 6 3.1175 - 2.9338 1.00 1413 153 0.1915 0.2592 REMARK 3 7 2.9338 - 2.7870 1.00 1407 153 0.1969 0.2849 REMARK 3 8 2.7870 - 2.6657 0.99 1422 153 0.2021 0.2670 REMARK 3 9 2.6657 - 2.5631 0.96 1360 148 0.2094 0.2749 REMARK 3 10 2.5631 - 2.4747 0.92 1284 138 0.2086 0.2927 REMARK 3 11 2.4747 - 2.3973 0.88 1246 136 0.2268 0.3162 REMARK 3 12 2.3973 - 2.3288 0.82 1165 127 0.2213 0.2747 REMARK 3 13 2.3288 - 2.2675 0.77 1072 115 0.2417 0.2939 REMARK 3 14 2.2675 - 2.2122 0.66 931 101 0.2469 0.3233 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.280 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.320 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2801 REMARK 3 ANGLE : 1.033 3788 REMARK 3 CHIRALITY : 0.066 430 REMARK 3 PLANARITY : 0.004 462 REMARK 3 DIHEDRAL : 17.178 1641 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 17 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 12 THROUGH 25 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.2224 -1.6735 227.5134 REMARK 3 T TENSOR REMARK 3 T11: 0.2223 T22: 0.2057 REMARK 3 T33: 0.2099 T12: -0.0110 REMARK 3 T13: 0.0601 T23: 0.0225 REMARK 3 L TENSOR REMARK 3 L11: 3.1617 L22: 3.4873 REMARK 3 L33: 4.0269 L12: -0.7850 REMARK 3 L13: 0.7376 L23: -0.1043 REMARK 3 S TENSOR REMARK 3 S11: -0.3406 S12: 0.0768 S13: -0.0719 REMARK 3 S21: 0.1696 S22: -0.2312 S23: -0.1094 REMARK 3 S31: 0.2414 S32: 0.0371 S33: 0.4878 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 26 THROUGH 44 ) REMARK 3 ORIGIN FOR THE GROUP (A): 50.6071 -1.3595 219.2969 REMARK 3 T TENSOR REMARK 3 T11: 0.3797 T22: 0.1904 REMARK 3 T33: 0.2661 T12: 0.0516 REMARK 3 T13: -0.0441 T23: 0.0413 REMARK 3 L TENSOR REMARK 3 L11: 3.2660 L22: 2.6514 REMARK 3 L33: 2.6464 L12: 0.9794 REMARK 3 L13: -0.4707 L23: 0.1048 REMARK 3 S TENSOR REMARK 3 S11: -0.0534 S12: -0.2669 S13: -0.3102 REMARK 3 S21: 0.4800 S22: 0.0426 S23: -0.4034 REMARK 3 S31: 0.2855 S32: 0.3026 S33: 0.0135 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 45 THROUGH 84 ) REMARK 3 ORIGIN FOR THE GROUP (A): 48.2633 -7.5802 219.7092 REMARK 3 T TENSOR REMARK 3 T11: 0.4212 T22: 0.2880 REMARK 3 T33: 0.3221 T12: -0.0425 REMARK 3 T13: 0.0502 T23: -0.0280 REMARK 3 L TENSOR REMARK 3 L11: 3.6407 L22: 2.7175 REMARK 3 L33: 2.8228 L12: 0.1764 REMARK 3 L13: -1.7913 L23: 0.1685 REMARK 3 S TENSOR REMARK 3 S11: -0.2240 S12: -0.2467 S13: -0.6819 REMARK 3 S21: -0.0251 S22: 0.0312 S23: -0.3786 REMARK 3 S31: -0.2517 S32: 0.3275 S33: 0.0603 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 85 THROUGH 104 ) REMARK 3 ORIGIN FOR THE GROUP (A): 48.2574 -3.5302 211.4799 REMARK 3 T TENSOR REMARK 3 T11: 0.4557 T22: 0.2541 REMARK 3 T33: 0.2034 T12: -0.0176 REMARK 3 T13: -0.0101 T23: -0.0337 REMARK 3 L TENSOR REMARK 3 L11: 0.7102 L22: 2.9232 REMARK 3 L33: 1.7424 L12: -0.5618 REMARK 3 L13: 0.4101 L23: 1.2632 REMARK 3 S TENSOR REMARK 3 S11: -0.1275 S12: 0.1952 S13: -0.0199 REMARK 3 S21: -0.3410 S22: 0.0909 S23: -0.1043 REMARK 3 S31: 0.1816 S32: -0.0322 S33: -0.0030 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 105 THROUGH 120 ) REMARK 3 ORIGIN FOR THE GROUP (A): 53.5496 4.4169 204.7292 REMARK 3 T TENSOR REMARK 3 T11: 0.4739 T22: 0.3168 REMARK 3 T33: 0.2384 T12: 0.0261 REMARK 3 T13: 0.0865 T23: 0.0271 REMARK 3 L TENSOR REMARK 3 L11: 3.4591 L22: 5.4668 REMARK 3 L33: 2.6151 L12: 1.7768 REMARK 3 L13: 0.4023 L23: 1.1428 REMARK 3 S TENSOR REMARK 3 S11: 0.0253 S12: 0.5667 S13: -0.1928 REMARK 3 S21: -1.0190 S22: -0.0834 S23: -0.3042 REMARK 3 S31: -0.0179 S32: 0.3960 S33: -0.0485 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 121 THROUGH 150 ) REMARK 3 ORIGIN FOR THE GROUP (A): 47.8917 8.8590 210.8702 REMARK 3 T TENSOR REMARK 3 T11: 0.3836 T22: 0.2847 REMARK 3 T33: 0.1872 T12: -0.0324 REMARK 3 T13: -0.0055 T23: 0.0047 REMARK 3 L TENSOR REMARK 3 L11: 1.6671 L22: 2.3145 REMARK 3 L33: 1.9094 L12: -1.2291 REMARK 3 L13: 0.7940 L23: -0.6669 REMARK 3 S TENSOR REMARK 3 S11: -0.1975 S12: 0.3184 S13: 0.0913 REMARK 3 S21: -0.5197 S22: -0.0353 S23: -0.2264 REMARK 3 S31: -0.3403 S32: 0.1170 S33: 0.1609 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 151 THROUGH 160 ) REMARK 3 ORIGIN FOR THE GROUP (A): 40.7306 11.0686 205.4975 REMARK 3 T TENSOR REMARK 3 T11: 0.5419 T22: 0.3559 REMARK 3 T33: 0.3134 T12: -0.0364 REMARK 3 T13: -0.0520 T23: 0.0727 REMARK 3 L TENSOR REMARK 3 L11: 5.7880 L22: 1.9401 REMARK 3 L33: 1.1436 L12: 1.9749 REMARK 3 L13: -0.8417 L23: -1.2986 REMARK 3 S TENSOR REMARK 3 S11: -0.3023 S12: 0.7229 S13: 0.3929 REMARK 3 S21: -0.7158 S22: 0.2085 S23: 0.2010 REMARK 3 S31: -0.0867 S32: -0.1229 S33: 0.0986 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 161 THROUGH 185 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.5802 7.3651 214.2930 REMARK 3 T TENSOR REMARK 3 T11: 0.4432 T22: 0.2532 REMARK 3 T33: 0.2587 T12: 0.0115 REMARK 3 T13: -0.0364 T23: 0.0204 REMARK 3 L TENSOR REMARK 3 L11: 3.4308 L22: 3.3732 REMARK 3 L33: 2.7855 L12: 0.1212 REMARK 3 L13: 1.0259 L23: 0.0802 REMARK 3 S TENSOR REMARK 3 S11: 0.0182 S12: 0.0438 S13: -0.1465 REMARK 3 S21: -0.2682 S22: 0.1281 S23: 0.4791 REMARK 3 S31: -0.1264 S32: -0.3090 S33: -0.1066 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 186 THROUGH 198 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.2767 3.4117 218.3380 REMARK 3 T TENSOR REMARK 3 T11: 0.2439 T22: 0.1923 REMARK 3 T33: 0.1862 T12: 0.0330 REMARK 3 T13: -0.0083 T23: 0.0086 REMARK 3 L TENSOR REMARK 3 L11: 4.4682 L22: 2.4536 REMARK 3 L33: 5.8337 L12: -0.1922 REMARK 3 L13: 2.0937 L23: 0.9737 REMARK 3 S TENSOR REMARK 3 S11: -0.3526 S12: -0.0210 S13: -0.0457 REMARK 3 S21: -0.0953 S22: 0.2464 S23: 0.3715 REMARK 3 S31: -0.3747 S32: -0.2221 S33: 0.0792 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 12 THROUGH 25 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.7487 12.3976 235.8600 REMARK 3 T TENSOR REMARK 3 T11: 0.3721 T22: 0.3672 REMARK 3 T33: 0.3219 T12: -0.0473 REMARK 3 T13: 0.0928 T23: -0.0427 REMARK 3 L TENSOR REMARK 3 L11: 2.4801 L22: 6.8127 REMARK 3 L33: 6.2789 L12: -0.7483 REMARK 3 L13: 0.4830 L23: -4.9326 REMARK 3 S TENSOR REMARK 3 S11: 0.1066 S12: -0.1373 S13: 0.0913 REMARK 3 S21: -0.0867 S22: -0.0215 S23: -1.2369 REMARK 3 S31: -0.6349 S32: 0.7007 S33: 0.1765 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 26 THROUGH 62 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.2218 11.0339 249.6885 REMARK 3 T TENSOR REMARK 3 T11: 0.3392 T22: 0.2314 REMARK 3 T33: 0.2311 T12: -0.0272 REMARK 3 T13: -0.0063 T23: -0.0239 REMARK 3 L TENSOR REMARK 3 L11: 2.8287 L22: 2.3056 REMARK 3 L33: 0.7147 L12: 0.6160 REMARK 3 L13: -0.6132 L23: -0.1323 REMARK 3 S TENSOR REMARK 3 S11: 0.1664 S12: -0.4945 S13: 0.0498 REMARK 3 S21: 0.6117 S22: -0.1254 S23: 0.0872 REMARK 3 S31: -0.1595 S32: 0.0569 S33: -0.0143 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 63 THROUGH 84 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.9639 16.3860 244.1397 REMARK 3 T TENSOR REMARK 3 T11: 0.3129 T22: 0.2134 REMARK 3 T33: 0.3120 T12: -0.0078 REMARK 3 T13: 0.0403 T23: -0.0141 REMARK 3 L TENSOR REMARK 3 L11: 3.1836 L22: 3.9326 REMARK 3 L33: 2.9939 L12: 1.5950 REMARK 3 L13: -1.0668 L23: 0.0417 REMARK 3 S TENSOR REMARK 3 S11: 0.5101 S12: -0.0162 S13: 0.5337 REMARK 3 S21: -0.0908 S22: -0.2552 S23: 0.4792 REMARK 3 S31: -0.2620 S32: -0.0780 S33: -0.1969 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 85 THROUGH 104 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.9729 11.1597 241.9591 REMARK 3 T TENSOR REMARK 3 T11: 0.3717 T22: 0.2322 REMARK 3 T33: 0.2365 T12: 0.0670 REMARK 3 T13: -0.0915 T23: 0.0302 REMARK 3 L TENSOR REMARK 3 L11: 2.2752 L22: 2.1785 REMARK 3 L33: 1.2408 L12: -0.5970 REMARK 3 L13: 0.6670 L23: 0.8880 REMARK 3 S TENSOR REMARK 3 S11: -0.3116 S12: 0.1110 S13: 0.1514 REMARK 3 S21: 0.0577 S22: 0.2260 S23: -0.0655 REMARK 3 S31: -0.5002 S32: -0.4436 S33: 0.0405 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 105 THROUGH 120 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.8421 2.0373 243.7327 REMARK 3 T TENSOR REMARK 3 T11: 0.0655 T22: 0.3554 REMARK 3 T33: 0.3991 T12: -0.0765 REMARK 3 T13: -0.0005 T23: -0.0654 REMARK 3 L TENSOR REMARK 3 L11: 1.9962 L22: 2.9620 REMARK 3 L33: 2.8899 L12: -0.2509 REMARK 3 L13: -0.5249 L23: 0.1453 REMARK 3 S TENSOR REMARK 3 S11: 0.3050 S12: -0.2589 S13: -0.2504 REMARK 3 S21: 0.0555 S22: -0.3480 S23: 0.8552 REMARK 3 S31: -0.2030 S32: -0.5917 S33: -0.2222 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 121 THROUGH 150 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.1918 -1.0816 240.6996 REMARK 3 T TENSOR REMARK 3 T11: 0.3004 T22: 0.2025 REMARK 3 T33: 0.2463 T12: 0.0122 REMARK 3 T13: -0.0316 T23: -0.0312 REMARK 3 L TENSOR REMARK 3 L11: 2.4014 L22: 2.9356 REMARK 3 L33: 3.5119 L12: 0.5580 REMARK 3 L13: 0.6501 L23: -0.6599 REMARK 3 S TENSOR REMARK 3 S11: 0.1650 S12: 0.1497 S13: -0.1424 REMARK 3 S21: -0.1626 S22: -0.1507 S23: 0.1789 REMARK 3 S31: 0.3851 S32: -0.1057 S33: -0.0300 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 151 THROUGH 160 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.3086 -3.1765 232.1132 REMARK 3 T TENSOR REMARK 3 T11: 0.2966 T22: 0.3290 REMARK 3 T33: 0.2853 T12: 0.0136 REMARK 3 T13: -0.1521 T23: -0.2407 REMARK 3 L TENSOR REMARK 3 L11: 2.6542 L22: 0.8272 REMARK 3 L33: 3.4267 L12: 1.3213 REMARK 3 L13: -2.1229 L23: -0.5166 REMARK 3 S TENSOR REMARK 3 S11: 0.0189 S12: 0.6811 S13: -0.4556 REMARK 3 S21: 0.0193 S22: -0.2577 S23: 0.1433 REMARK 3 S31: -0.1312 S32: -0.7731 S33: -0.0086 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 161 THROUGH 198 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.2612 3.5460 233.5394 REMARK 3 T TENSOR REMARK 3 T11: 0.2716 T22: 0.2345 REMARK 3 T33: 0.2361 T12: 0.0556 REMARK 3 T13: -0.0298 T23: -0.0613 REMARK 3 L TENSOR REMARK 3 L11: 4.2656 L22: 2.3668 REMARK 3 L33: 2.8422 L12: 0.8764 REMARK 3 L13: -0.3131 L23: 0.3665 REMARK 3 S TENSOR REMARK 3 S11: 0.0337 S12: 0.4233 S13: -0.1132 REMARK 3 S21: -0.2195 S22: 0.0968 S23: -0.1083 REMARK 3 S31: -0.1071 S32: -0.0131 S33: -0.1234 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8E0B COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-AUG-22. REMARK 100 THE DEPOSITION ID IS D_1000267641. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-DEC-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CHESS REMARK 200 BEAMLINE : A1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9778 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20483 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.4 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : 0.11700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.24 REMARK 200 COMPLETENESS FOR SHELL (%) : 70.7 REMARK 200 DATA REDUNDANCY IN SHELL : 3.00 REMARK 200 R MERGE FOR SHELL (I) : 0.49200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 8DZM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.31 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.48 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.2M (NH4)2SO4 AND 0.1M SODIUM REMARK 280 CITRATE, PH5.5., VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 30.90700 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 PHE A 3 REMARK 465 ILE A 4 REMARK 465 PHE A 5 REMARK 465 ASP A 6 REMARK 465 TRP A 7 REMARK 465 ILE A 8 REMARK 465 TYR A 9 REMARK 465 SER A 10 REMARK 465 GLY A 11 REMARK 465 PHE A 12 REMARK 465 ASP A 47 REMARK 465 ASP A 48 REMARK 465 ARG A 49 REMARK 465 LEU A 50 REMARK 465 GLY A 51 REMARK 465 GLN A 52 REMARK 465 HIS A 53 REMARK 465 VAL A 54 REMARK 465 PRO A 55 REMARK 465 THR A 56 REMARK 465 LEU A 57 REMARK 465 HIS A 58 REMARK 465 PRO A 59 REMARK 465 GLY A 78 REMARK 465 HIS A 79 REMARK 465 VAL A 80 REMARK 465 GLN A 81 REMARK 465 ALA A 82 REMARK 465 ARG A 83 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 PHE B 3 REMARK 465 ILE B 4 REMARK 465 PHE B 5 REMARK 465 ASP B 6 REMARK 465 TRP B 7 REMARK 465 ILE B 8 REMARK 465 TYR B 9 REMARK 465 SER B 10 REMARK 465 GLY B 11 REMARK 465 PHE B 12 REMARK 465 ASP B 47 REMARK 465 ASP B 48 REMARK 465 ARG B 49 REMARK 465 LEU B 50 REMARK 465 GLY B 51 REMARK 465 GLN B 52 REMARK 465 HIS B 53 REMARK 465 VAL B 54 REMARK 465 GLY B 77 REMARK 465 GLY B 78 REMARK 465 HIS B 79 REMARK 465 VAL B 80 REMARK 465 GLN B 81 REMARK 465 ALA B 82 REMARK 465 ARG B 83 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 46 CG CD CE NZ REMARK 470 LYS B 46 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 361 O HOH A 362 29411 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 35 -0.20 78.35 REMARK 500 ALA A 67 -127.75 49.98 REMARK 500 LYS A 135 37.66 72.15 REMARK 500 LEU A 168 -157.95 -80.43 REMARK 500 ASN A 169 -40.60 -160.02 REMARK 500 ALA B 67 -118.81 32.20 REMARK 500 LYS B 135 33.05 71.41 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LYS A 166 GLU A 167 136.66 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 8E0A RELATED DB: PDB REMARK 900 MUTANT DBREF 8E0B A 1 198 UNP Q9Y6B6 SAR1B_HUMAN 1 198 DBREF 8E0B B 1 198 UNP Q9Y6B6 SAR1B_HUMAN 1 198 SEQADV 8E0B ASN A 39 UNP Q9Y6B6 THR 39 ENGINEERED MUTATION SEQADV 8E0B ASN B 39 UNP Q9Y6B6 THR 39 ENGINEERED MUTATION SEQRES 1 A 198 MET SER PHE ILE PHE ASP TRP ILE TYR SER GLY PHE SER SEQRES 2 A 198 SER VAL LEU GLN PHE LEU GLY LEU TYR LYS LYS THR GLY SEQRES 3 A 198 LYS LEU VAL PHE LEU GLY LEU ASP ASN ALA GLY LYS ASN SEQRES 4 A 198 THR LEU LEU HIS MET LEU LYS ASP ASP ARG LEU GLY GLN SEQRES 5 A 198 HIS VAL PRO THR LEU HIS PRO THR SER GLU GLU LEU THR SEQRES 6 A 198 ILE ALA GLY MET THR PHE THR THR PHE ASP LEU GLY GLY SEQRES 7 A 198 HIS VAL GLN ALA ARG ARG VAL TRP LYS ASN TYR LEU PRO SEQRES 8 A 198 ALA ILE ASN GLY ILE VAL PHE LEU VAL ASP CYS ALA ASP SEQRES 9 A 198 HIS GLU ARG LEU LEU GLU SER LYS GLU GLU LEU ASP SER SEQRES 10 A 198 LEU MET THR ASP GLU THR ILE ALA ASN VAL PRO ILE LEU SEQRES 11 A 198 ILE LEU GLY ASN LYS ILE ASP ARG PRO GLU ALA ILE SER SEQRES 12 A 198 GLU GLU ARG LEU ARG GLU MET PHE GLY LEU TYR GLY GLN SEQRES 13 A 198 THR THR GLY LYS GLY SER ILE SER LEU LYS GLU LEU ASN SEQRES 14 A 198 ALA ARG PRO LEU GLU VAL PHE MET CYS SER VAL LEU LYS SEQRES 15 A 198 ARG GLN GLY TYR GLY GLU GLY PHE ARG TRP MET ALA GLN SEQRES 16 A 198 TYR ILE ASP SEQRES 1 B 198 MET SER PHE ILE PHE ASP TRP ILE TYR SER GLY PHE SER SEQRES 2 B 198 SER VAL LEU GLN PHE LEU GLY LEU TYR LYS LYS THR GLY SEQRES 3 B 198 LYS LEU VAL PHE LEU GLY LEU ASP ASN ALA GLY LYS ASN SEQRES 4 B 198 THR LEU LEU HIS MET LEU LYS ASP ASP ARG LEU GLY GLN SEQRES 5 B 198 HIS VAL PRO THR LEU HIS PRO THR SER GLU GLU LEU THR SEQRES 6 B 198 ILE ALA GLY MET THR PHE THR THR PHE ASP LEU GLY GLY SEQRES 7 B 198 HIS VAL GLN ALA ARG ARG VAL TRP LYS ASN TYR LEU PRO SEQRES 8 B 198 ALA ILE ASN GLY ILE VAL PHE LEU VAL ASP CYS ALA ASP SEQRES 9 B 198 HIS GLU ARG LEU LEU GLU SER LYS GLU GLU LEU ASP SER SEQRES 10 B 198 LEU MET THR ASP GLU THR ILE ALA ASN VAL PRO ILE LEU SEQRES 11 B 198 ILE LEU GLY ASN LYS ILE ASP ARG PRO GLU ALA ILE SER SEQRES 12 B 198 GLU GLU ARG LEU ARG GLU MET PHE GLY LEU TYR GLY GLN SEQRES 13 B 198 THR THR GLY LYS GLY SER ILE SER LEU LYS GLU LEU ASN SEQRES 14 B 198 ALA ARG PRO LEU GLU VAL PHE MET CYS SER VAL LEU LYS SEQRES 15 B 198 ARG GLN GLY TYR GLY GLU GLY PHE ARG TRP MET ALA GLN SEQRES 16 B 198 TYR ILE ASP HET SO4 A 201 5 HET SO4 A 202 5 HET GDP A 203 28 HET SO4 B 201 5 HET SO4 B 202 5 HET SO4 B 203 5 HET GDP B 204 28 HETNAM SO4 SULFATE ION HETNAM GDP GUANOSINE-5'-DIPHOSPHATE FORMUL 3 SO4 5(O4 S 2-) FORMUL 5 GDP 2(C10 H15 N5 O11 P2) FORMUL 10 HOH *134(H2 O) HELIX 1 AA1 SER A 13 LEU A 19 1 7 HELIX 2 AA2 GLY A 37 LEU A 45 1 9 HELIX 3 AA3 ARG A 84 ILE A 93 5 10 HELIX 4 AA4 ASP A 104 GLU A 106 5 3 HELIX 5 AA5 ARG A 107 THR A 120 1 14 HELIX 6 AA6 ASP A 121 ALA A 125 5 5 HELIX 7 AA7 SER A 143 PHE A 151 1 9 HELIX 8 AA8 GLY A 185 GLN A 195 1 11 HELIX 9 AA9 SER B 13 LEU B 19 1 7 HELIX 10 AB1 GLY B 37 LEU B 45 1 9 HELIX 11 AB2 ARG B 84 ILE B 93 5 10 HELIX 12 AB3 ASP B 104 GLU B 106 5 3 HELIX 13 AB4 ARG B 107 ASP B 121 1 15 HELIX 14 AB5 GLU B 122 ALA B 125 5 4 HELIX 15 AB6 SER B 143 PHE B 151 1 9 HELIX 16 AB7 GLY B 185 GLN B 195 1 11 SHEET 1 AA1 6 GLU A 62 ILE A 66 0 SHEET 2 AA1 6 MET A 69 THR A 73 -1 O MET A 69 N ILE A 66 SHEET 3 AA1 6 GLY A 26 GLY A 32 1 N PHE A 30 O THR A 72 SHEET 4 AA1 6 GLY A 95 ASP A 101 1 O VAL A 97 N LEU A 31 SHEET 5 AA1 6 ILE A 129 ASN A 134 1 O LEU A 130 N PHE A 98 SHEET 6 AA1 6 LEU A 173 MET A 177 1 O PHE A 176 N ILE A 131 SHEET 1 AA2 6 GLU B 63 ILE B 66 0 SHEET 2 AA2 6 MET B 69 THR B 73 -1 O MET B 69 N ILE B 66 SHEET 3 AA2 6 GLY B 26 LEU B 31 1 N PHE B 30 O THR B 72 SHEET 4 AA2 6 GLY B 95 ASP B 101 1 O VAL B 97 N LEU B 31 SHEET 5 AA2 6 ILE B 129 ASN B 134 1 O LEU B 130 N ILE B 96 SHEET 6 AA2 6 LEU B 173 MET B 177 1 O GLU B 174 N ILE B 131 CRYST1 52.971 61.814 70.681 90.00 106.17 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018878 0.000000 0.005472 0.00000 SCALE2 0.000000 0.016178 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014731 0.00000