HEADER SIGNALING PROTEIN 09-AUG-22 8E0H TITLE CRYSTAL STRUCTURE OF HUMAN SAR1AD104/D140A DOUBLE MUTANT CAVEAT 8E0H RESIDUES HIS A 58 AND PRO A 59 THAT ARE NEXT TO EACH OTHER CAVEAT 2 8E0H IN THE SAMPLE SEQUENCE ARE NOT PROPERLY LINKED: DISTANCE CAVEAT 3 8E0H BETWEEN C AND N IS 4.82. RESIDUES HIS B 58 AND PRO B 59 CAVEAT 4 8E0H THAT ARE NEXT TO EACH OTHER IN THE SAMPLE SEQUENCE ARE NOT CAVEAT 5 8E0H PROPERLY LINKED: DISTANCE BETWEEN C AND N IS 5.22. COMPND MOL_ID: 1; COMPND 2 MOLECULE: GTP-BINDING PROTEIN SAR1A; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: COPII-ASSOCIATED SMALL GTPASE; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SAR1A, SAR1, SARA, SARA1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SAR1A, PPGPP, COPII, SMALL GTPASE, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Q.HUANG REVDAT 3 25-OCT-23 8E0H 1 REMARK REVDAT 2 22-MAR-23 8E0H 1 JRNL REVDAT 1 30-NOV-22 8E0H 0 JRNL AUTH Q.HUANG,D.M.E.SZEBENYI JRNL TITL THE ALARMONE PPGPP SELECTIVELY INHIBITS THE ISOFORM A OF THE JRNL TITL 2 HUMAN SMALL GTPASE SAR1. JRNL REF PROTEINS V. 91 518 2023 JRNL REFN ESSN 1097-0134 JRNL PMID 36369712 JRNL DOI 10.1002/PROT.26445 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.13 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 25407 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.860 REMARK 3 FREE R VALUE TEST SET COUNT : 1998 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.1310 - 4.8180 0.99 1798 154 0.1695 0.1989 REMARK 3 2 4.8180 - 3.8248 1.00 1717 146 0.1557 0.1653 REMARK 3 3 3.8248 - 3.3415 1.00 1711 146 0.1655 0.2405 REMARK 3 4 3.3415 - 3.0360 1.00 1676 144 0.1942 0.2522 REMARK 3 5 3.0360 - 2.8185 1.00 1676 142 0.2112 0.2516 REMARK 3 6 2.8185 - 2.6523 1.00 1651 142 0.2069 0.2690 REMARK 3 7 2.6523 - 2.5195 1.00 1659 141 0.2021 0.2749 REMARK 3 8 2.5195 - 2.4098 1.00 1677 144 0.1867 0.2618 REMARK 3 9 2.4098 - 2.3171 1.00 1656 141 0.2002 0.2364 REMARK 3 10 2.3171 - 2.2371 1.00 1627 139 0.1918 0.2630 REMARK 3 11 2.2371 - 2.1672 1.00 1654 142 0.1933 0.2661 REMARK 3 12 2.1672 - 2.1052 1.00 1618 138 0.1956 0.2772 REMARK 3 13 2.1052 - 2.0498 1.00 1652 141 0.2067 0.2501 REMARK 3 14 2.0498 - 2.0000 0.99 1637 138 0.2300 0.2998 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.720 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.11 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2832 REMARK 3 ANGLE : 0.872 3833 REMARK 3 CHIRALITY : 0.054 441 REMARK 3 PLANARITY : 0.005 462 REMARK 3 DIHEDRAL : 18.811 1655 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 14 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 13 THROUGH 37 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.1704 1.5066 -33.0035 REMARK 3 T TENSOR REMARK 3 T11: 0.2945 T22: 0.2502 REMARK 3 T33: 0.2533 T12: -0.0179 REMARK 3 T13: 0.0457 T23: 0.0184 REMARK 3 L TENSOR REMARK 3 L11: 0.8924 L22: 3.0783 REMARK 3 L33: 1.9071 L12: -0.7689 REMARK 3 L13: 0.8885 L23: 0.0845 REMARK 3 S TENSOR REMARK 3 S11: 0.1142 S12: 0.0733 S13: 0.0039 REMARK 3 S21: -0.4284 S22: -0.0317 S23: -0.2082 REMARK 3 S31: -0.1623 S32: -0.0532 S33: -0.1934 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 38 THROUGH 62 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.5033 7.7966 -24.9412 REMARK 3 T TENSOR REMARK 3 T11: 0.2622 T22: 0.3948 REMARK 3 T33: 0.2989 T12: -0.0154 REMARK 3 T13: 0.0623 T23: 0.0213 REMARK 3 L TENSOR REMARK 3 L11: 4.6267 L22: 2.6075 REMARK 3 L33: 3.7309 L12: 2.3036 REMARK 3 L13: 1.1375 L23: -1.3704 REMARK 3 S TENSOR REMARK 3 S11: 0.1414 S12: 0.2039 S13: 0.2250 REMARK 3 S21: -0.1380 S22: -0.1774 S23: -0.3792 REMARK 3 S31: -0.2331 S32: 0.3413 S33: -0.1445 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 63 THROUGH 79 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.0818 9.1205 -29.1452 REMARK 3 T TENSOR REMARK 3 T11: 0.3011 T22: 0.2574 REMARK 3 T33: 0.2976 T12: -0.0162 REMARK 3 T13: 0.0553 T23: 0.0265 REMARK 3 L TENSOR REMARK 3 L11: 2.4715 L22: 2.2170 REMARK 3 L33: 6.1346 L12: -0.7404 REMARK 3 L13: -1.5490 L23: 2.3689 REMARK 3 S TENSOR REMARK 3 S11: 0.3893 S12: -0.1032 S13: 0.4470 REMARK 3 S21: -0.3261 S22: 0.2274 S23: -0.1894 REMARK 3 S31: -0.2122 S32: 0.5120 S33: -0.3909 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 80 THROUGH 89 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.3683 17.8082 -23.1552 REMARK 3 T TENSOR REMARK 3 T11: 0.3876 T22: 0.3087 REMARK 3 T33: 0.2857 T12: 0.0206 REMARK 3 T13: 0.0060 T23: -0.0176 REMARK 3 L TENSOR REMARK 3 L11: 2.4514 L22: 2.9465 REMARK 3 L33: 3.3153 L12: 1.4000 REMARK 3 L13: -1.0555 L23: -0.6052 REMARK 3 S TENSOR REMARK 3 S11: -0.1224 S12: -0.4219 S13: 0.2017 REMARK 3 S21: 0.3065 S22: 0.0565 S23: -0.1049 REMARK 3 S31: -0.0040 S32: 0.1449 S33: 0.0037 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 90 THROUGH 134 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.6780 5.0851 -23.3656 REMARK 3 T TENSOR REMARK 3 T11: 0.2693 T22: 0.2763 REMARK 3 T33: 0.2720 T12: 0.0089 REMARK 3 T13: 0.0177 T23: -0.0074 REMARK 3 L TENSOR REMARK 3 L11: 0.9834 L22: 1.3893 REMARK 3 L33: 1.6612 L12: 0.4162 REMARK 3 L13: -0.4840 L23: 0.2196 REMARK 3 S TENSOR REMARK 3 S11: 0.0127 S12: 0.0482 S13: 0.0144 REMARK 3 S21: -0.1059 S22: -0.0884 S23: 0.1521 REMARK 3 S31: 0.1447 S32: -0.1801 S33: 0.0316 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 135 THROUGH 150 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.2897 -8.3153 -16.0988 REMARK 3 T TENSOR REMARK 3 T11: 0.3869 T22: 0.2914 REMARK 3 T33: 0.2930 T12: -0.0354 REMARK 3 T13: 0.0390 T23: 0.0161 REMARK 3 L TENSOR REMARK 3 L11: 1.7573 L22: 4.1172 REMARK 3 L33: 3.6385 L12: -1.2595 REMARK 3 L13: 0.0521 L23: -0.9081 REMARK 3 S TENSOR REMARK 3 S11: -0.0260 S12: -0.2247 S13: -0.3778 REMARK 3 S21: 0.0594 S22: 0.0552 S23: 0.3660 REMARK 3 S31: 0.8986 S32: -0.2787 S33: -0.0136 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 151 THROUGH 164 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.3058 -5.0829 -29.9431 REMARK 3 T TENSOR REMARK 3 T11: 0.3838 T22: 0.4333 REMARK 3 T33: 0.5019 T12: -0.0864 REMARK 3 T13: -0.0439 T23: -0.0116 REMARK 3 L TENSOR REMARK 3 L11: 3.7779 L22: 6.5480 REMARK 3 L33: 1.7108 L12: 1.1048 REMARK 3 L13: 2.3979 L23: 1.6981 REMARK 3 S TENSOR REMARK 3 S11: -0.1900 S12: 0.4649 S13: 0.0708 REMARK 3 S21: -0.6646 S22: -0.1720 S23: 0.9197 REMARK 3 S31: 0.7450 S32: -0.7426 S33: 0.2018 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 165 THROUGH 172 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.4779 -0.0270 -38.8747 REMARK 3 T TENSOR REMARK 3 T11: 0.7260 T22: 0.6890 REMARK 3 T33: 0.5908 T12: -0.0396 REMARK 3 T13: -0.3586 T23: -0.0215 REMARK 3 L TENSOR REMARK 3 L11: 3.5068 L22: 0.5159 REMARK 3 L33: 6.1006 L12: 1.3421 REMARK 3 L13: 4.6069 L23: 1.7596 REMARK 3 S TENSOR REMARK 3 S11: 0.1524 S12: 0.5378 S13: -0.3264 REMARK 3 S21: -1.7150 S22: 0.0499 S23: 1.1158 REMARK 3 S31: 0.1523 S32: -0.5174 S33: 0.1033 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 173 THROUGH 198 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.0530 -5.1171 -30.3259 REMARK 3 T TENSOR REMARK 3 T11: 0.3261 T22: 0.2528 REMARK 3 T33: 0.2826 T12: 0.0282 REMARK 3 T13: 0.0416 T23: -0.0536 REMARK 3 L TENSOR REMARK 3 L11: 2.1448 L22: 2.8595 REMARK 3 L33: 3.6627 L12: 0.0267 REMARK 3 L13: 0.1508 L23: -0.1987 REMARK 3 S TENSOR REMARK 3 S11: -0.0420 S12: 0.0916 S13: -0.2770 REMARK 3 S21: -0.1019 S22: 0.0623 S23: -0.0065 REMARK 3 S31: 0.5840 S32: 0.0896 S33: 0.0539 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 14 THROUGH 45 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.8980 -4.7045 7.5641 REMARK 3 T TENSOR REMARK 3 T11: 0.3708 T22: 0.2559 REMARK 3 T33: 0.3070 T12: 0.0436 REMARK 3 T13: 0.0181 T23: 0.0086 REMARK 3 L TENSOR REMARK 3 L11: 2.5947 L22: 2.3528 REMARK 3 L33: 3.0195 L12: -0.4556 REMARK 3 L13: -0.2851 L23: -0.1773 REMARK 3 S TENSOR REMARK 3 S11: -0.0646 S12: -0.2395 S13: -0.0842 REMARK 3 S21: -0.1518 S22: 0.0618 S23: -0.3355 REMARK 3 S31: 0.6312 S32: 0.1195 S33: -0.0121 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 46 THROUGH 66 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.7746 0.1732 16.4123 REMARK 3 T TENSOR REMARK 3 T11: 0.4149 T22: 0.4753 REMARK 3 T33: 0.4769 T12: 0.0921 REMARK 3 T13: -0.0185 T23: -0.0134 REMARK 3 L TENSOR REMARK 3 L11: 3.3557 L22: 4.4255 REMARK 3 L33: 4.2986 L12: -0.1570 REMARK 3 L13: -0.6959 L23: 1.8878 REMARK 3 S TENSOR REMARK 3 S11: -0.1908 S12: -0.5404 S13: 0.0130 REMARK 3 S21: 0.6960 S22: 0.2446 S23: -0.2436 REMARK 3 S31: 0.2967 S32: 0.2584 S33: -0.0983 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 67 THROUGH 134 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.3186 6.9710 4.0852 REMARK 3 T TENSOR REMARK 3 T11: 0.2380 T22: 0.2729 REMARK 3 T33: 0.2643 T12: -0.0485 REMARK 3 T13: 0.0152 T23: -0.0044 REMARK 3 L TENSOR REMARK 3 L11: 1.4178 L22: 2.5376 REMARK 3 L33: 1.8816 L12: -0.9165 REMARK 3 L13: -0.1613 L23: 0.5423 REMARK 3 S TENSOR REMARK 3 S11: -0.0436 S12: -0.1006 S13: -0.0155 REMARK 3 S21: -0.1835 S22: 0.0363 S23: -0.1730 REMARK 3 S31: -0.1605 S32: -0.0471 S33: 0.0106 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 135 THROUGH 172 ) REMARK 3 ORIGIN FOR THE GROUP (A): -35.8616 -2.3760 -0.5277 REMARK 3 T TENSOR REMARK 3 T11: 0.4290 T22: 0.5454 REMARK 3 T33: 0.4059 T12: -0.1280 REMARK 3 T13: -0.0755 T23: -0.0229 REMARK 3 L TENSOR REMARK 3 L11: 3.2873 L22: 2.3595 REMARK 3 L33: 1.4423 L12: 0.0175 REMARK 3 L13: -0.7926 L23: -0.4040 REMARK 3 S TENSOR REMARK 3 S11: -0.2515 S12: 0.5759 S13: -0.4252 REMARK 3 S21: -0.8189 S22: 0.1593 S23: 0.4908 REMARK 3 S31: 0.5641 S32: -0.8778 S33: -0.0004 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 173 THROUGH 198 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.9232 -7.7498 0.7790 REMARK 3 T TENSOR REMARK 3 T11: 0.4432 T22: 0.2469 REMARK 3 T33: 0.3616 T12: -0.0630 REMARK 3 T13: 0.0624 T23: -0.0175 REMARK 3 L TENSOR REMARK 3 L11: 3.9056 L22: 3.0569 REMARK 3 L33: 3.7119 L12: -0.0277 REMARK 3 L13: -1.7822 L23: -0.3008 REMARK 3 S TENSOR REMARK 3 S11: 0.0085 S12: -0.1029 S13: -0.5664 REMARK 3 S21: -0.1882 S22: -0.0378 S23: -0.0382 REMARK 3 S31: 0.3599 S32: 0.0367 S33: 0.1473 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8E0H COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-AUG-22. REMARK 100 THE DEPOSITION ID IS D_1000267649. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-MAY-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CHESS REMARK 200 BEAMLINE : F1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9778 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25484 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.200 REMARK 200 R MERGE (I) : 0.09900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 32.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.03 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 6.70 REMARK 200 R MERGE FOR SHELL (I) : 0.36100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 8DZM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.76 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.04 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 3.5M NACL, 0.2M CACL2 AND 0.1M NAAC, REMARK 280 PH4.5., VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 22.26700 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 66.97250 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.54100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 66.97250 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 22.26700 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 30.54100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 PHE A 3 REMARK 465 ILE A 4 REMARK 465 PHE A 5 REMARK 465 GLU A 6 REMARK 465 TRP A 7 REMARK 465 ILE A 8 REMARK 465 TYR A 9 REMARK 465 ASN A 10 REMARK 465 GLY A 11 REMARK 465 PHE A 12 REMARK 465 ASP A 48 REMARK 465 ARG A 49 REMARK 465 LEU A 50 REMARK 465 GLY A 51 REMARK 465 GLN A 52 REMARK 465 HIS A 53 REMARK 465 GLY A 78 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 PHE B 3 REMARK 465 ILE B 4 REMARK 465 PHE B 5 REMARK 465 GLU B 6 REMARK 465 TRP B 7 REMARK 465 ILE B 8 REMARK 465 TYR B 9 REMARK 465 ASN B 10 REMARK 465 GLY B 11 REMARK 465 PHE B 12 REMARK 465 SER B 13 REMARK 465 ASP B 48 REMARK 465 ARG B 49 REMARK 465 LEU B 50 REMARK 465 GLY B 51 REMARK 465 GLY B 78 REMARK 465 GLY B 155 REMARK 465 GLN B 156 REMARK 465 THR B 157 REMARK 465 THR B 158 REMARK 465 GLY B 159 REMARK 465 LYS B 160 REMARK 465 GLY B 161 REMARK 465 ASN B 162 REMARK 465 VAL B 163 REMARK 465 THR B 164 REMARK 465 LEU B 165 REMARK 465 LYS B 166 REMARK 465 GLU B 167 REMARK 465 LEU B 168 REMARK 465 ASN B 169 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 47 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N HIS A 79 O HOH A 301 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 35 -0.22 83.35 REMARK 500 LYS A 46 116.95 175.42 REMARK 500 ALA A 67 -127.92 53.89 REMARK 500 LEU A 76 59.81 -97.85 REMARK 500 ALA B 67 -121.65 53.05 REMARK 500 LEU B 76 59.39 -102.49 REMARK 500 LEU B 90 74.45 -119.77 REMARK 500 ALA B 104 73.54 -100.75 REMARK 500 LYS B 135 33.67 70.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 8DZM RELATED DB: PDB REMARK 900 MUTANT DBREF 8E0H A 1 198 UNP Q9NR31 SAR1A_HUMAN 1 198 DBREF 8E0H B 1 198 UNP Q9NR31 SAR1A_HUMAN 1 198 SEQADV 8E0H ALA A 104 UNP Q9NR31 ASP 104 ENGINEERED MUTATION SEQADV 8E0H ALA A 140 UNP Q9NR31 ASP 140 ENGINEERED MUTATION SEQADV 8E0H ALA B 104 UNP Q9NR31 ASP 104 ENGINEERED MUTATION SEQADV 8E0H ALA B 140 UNP Q9NR31 ASP 140 ENGINEERED MUTATION SEQRES 1 A 198 MET SER PHE ILE PHE GLU TRP ILE TYR ASN GLY PHE SER SEQRES 2 A 198 SER VAL LEU GLN PHE LEU GLY LEU TYR LYS LYS SER GLY SEQRES 3 A 198 LYS LEU VAL PHE LEU GLY LEU ASP ASN ALA GLY LYS THR SEQRES 4 A 198 THR LEU LEU HIS MET LEU LYS ASP ASP ARG LEU GLY GLN SEQRES 5 A 198 HIS VAL PRO THR LEU HIS PRO THR SER GLU GLU LEU THR SEQRES 6 A 198 ILE ALA GLY MET THR PHE THR THR PHE ASP LEU GLY GLY SEQRES 7 A 198 HIS GLU GLN ALA ARG ARG VAL TRP LYS ASN TYR LEU PRO SEQRES 8 A 198 ALA ILE ASN GLY ILE VAL PHE LEU VAL ASP CYS ALA ALA SEQRES 9 A 198 HIS SER ARG LEU VAL GLU SER LYS VAL GLU LEU ASN ALA SEQRES 10 A 198 LEU MET THR ASP GLU THR ILE SER ASN VAL PRO ILE LEU SEQRES 11 A 198 ILE LEU GLY ASN LYS ILE ASP ARG THR ALA ALA ILE SER SEQRES 12 A 198 GLU GLU LYS LEU ARG GLU ILE PHE GLY LEU TYR GLY GLN SEQRES 13 A 198 THR THR GLY LYS GLY ASN VAL THR LEU LYS GLU LEU ASN SEQRES 14 A 198 ALA ARG PRO MET GLU VAL PHE MET CYS SER VAL LEU LYS SEQRES 15 A 198 ARG GLN GLY TYR GLY GLU GLY PHE ARG TRP LEU SER GLN SEQRES 16 A 198 TYR ILE ASP SEQRES 1 B 198 MET SER PHE ILE PHE GLU TRP ILE TYR ASN GLY PHE SER SEQRES 2 B 198 SER VAL LEU GLN PHE LEU GLY LEU TYR LYS LYS SER GLY SEQRES 3 B 198 LYS LEU VAL PHE LEU GLY LEU ASP ASN ALA GLY LYS THR SEQRES 4 B 198 THR LEU LEU HIS MET LEU LYS ASP ASP ARG LEU GLY GLN SEQRES 5 B 198 HIS VAL PRO THR LEU HIS PRO THR SER GLU GLU LEU THR SEQRES 6 B 198 ILE ALA GLY MET THR PHE THR THR PHE ASP LEU GLY GLY SEQRES 7 B 198 HIS GLU GLN ALA ARG ARG VAL TRP LYS ASN TYR LEU PRO SEQRES 8 B 198 ALA ILE ASN GLY ILE VAL PHE LEU VAL ASP CYS ALA ALA SEQRES 9 B 198 HIS SER ARG LEU VAL GLU SER LYS VAL GLU LEU ASN ALA SEQRES 10 B 198 LEU MET THR ASP GLU THR ILE SER ASN VAL PRO ILE LEU SEQRES 11 B 198 ILE LEU GLY ASN LYS ILE ASP ARG THR ALA ALA ILE SER SEQRES 12 B 198 GLU GLU LYS LEU ARG GLU ILE PHE GLY LEU TYR GLY GLN SEQRES 13 B 198 THR THR GLY LYS GLY ASN VAL THR LEU LYS GLU LEU ASN SEQRES 14 B 198 ALA ARG PRO MET GLU VAL PHE MET CYS SER VAL LEU LYS SEQRES 15 B 198 ARG GLN GLY TYR GLY GLU GLY PHE ARG TRP LEU SER GLN SEQRES 16 B 198 TYR ILE ASP HET G4P A 201 36 HET G4P B 201 36 HETNAM G4P GUANOSINE-5',3'-TETRAPHOSPHATE HETSYN G4P GUANOSINE TETRAPHOSPHATE;PPGPP FORMUL 3 G4P 2(C10 H17 N5 O17 P4) FORMUL 5 HOH *166(H2 O) HELIX 1 AA1 SER A 13 LEU A 19 1 7 HELIX 2 AA2 GLY A 37 LEU A 45 1 9 HELIX 3 AA3 GLU A 80 LEU A 90 1 11 HELIX 4 AA4 ALA A 104 SER A 106 5 3 HELIX 5 AA5 ARG A 107 THR A 120 1 14 HELIX 6 AA6 ASP A 121 SER A 125 5 5 HELIX 7 AA7 SER A 143 PHE A 151 1 9 HELIX 8 AA8 THR A 164 LEU A 168 5 5 HELIX 9 AA9 GLY A 185 GLN A 195 1 11 HELIX 10 AB1 VAL B 15 LEU B 19 1 5 HELIX 11 AB2 GLY B 37 LYS B 46 1 10 HELIX 12 AB3 GLU B 80 LEU B 90 1 11 HELIX 13 AB4 ALA B 104 SER B 106 5 3 HELIX 14 AB5 ARG B 107 THR B 120 1 14 HELIX 15 AB6 ASP B 121 SER B 125 5 5 HELIX 16 AB7 SER B 143 PHE B 151 1 9 HELIX 17 AB8 SER B 179 ARG B 183 5 5 HELIX 18 AB9 GLY B 185 GLN B 195 1 11 SHEET 1 AA1 6 GLU A 63 ILE A 66 0 SHEET 2 AA1 6 MET A 69 THR A 73 -1 O PHE A 71 N LEU A 64 SHEET 3 AA1 6 GLY A 26 GLY A 32 1 N PHE A 30 O THR A 72 SHEET 4 AA1 6 GLY A 95 ASP A 101 1 O VAL A 97 N LEU A 31 SHEET 5 AA1 6 ILE A 129 ASN A 134 1 O LEU A 130 N ILE A 96 SHEET 6 AA1 6 MET A 173 MET A 177 1 O GLU A 174 N ILE A 131 SHEET 1 AA2 7 THR B 56 LEU B 57 0 SHEET 2 AA2 7 SER B 61 ILE B 66 -1 O SER B 61 N LEU B 57 SHEET 3 AA2 7 MET B 69 THR B 73 -1 O MET B 69 N ILE B 66 SHEET 4 AA2 7 GLY B 26 GLY B 32 1 N PHE B 30 O THR B 72 SHEET 5 AA2 7 GLY B 95 ASP B 101 1 O VAL B 97 N LEU B 31 SHEET 6 AA2 7 ILE B 129 ASN B 134 1 O LEU B 130 N PHE B 98 SHEET 7 AA2 7 MET B 173 MET B 177 1 O GLU B 174 N ILE B 131 CRYST1 44.534 61.082 133.945 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022455 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016371 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007466 0.00000