HEADER VIRAL PROTEIN 11-AUG-22 8E1Q TITLE THE CRYSTAL STRUCTURE OF THE I38T MUTANT PA ENDONUCLEASE TITLE 2 (2009/H1N1/CALIFORNIA) IN COMPLEX WITH COMPOUND SJ001023044 COMPND MOL_ID: 1; COMPND 2 MOLECULE: POLYMERASE ACIDIC PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS (A/LUXEMBOURG/43/2009(H1N1)); SOURCE 3 ORGANISM_TAXID: 655278; SOURCE 4 STRAIN: A/LUXEMBOURG/43/2009(H1N1); SOURCE 5 GENE: PA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NUCLEASE, INFLUENZA, INHIBITOR RESISTANCE, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.G.CUYPERS,J.P.SLAVISH,Z.RANKOVIC,S.W.WHITE REVDAT 3 18-OCT-23 8E1Q 1 REMARK REVDAT 2 11-OCT-23 8E1Q 1 JRNL REVDAT 1 14-SEP-22 8E1Q 0 JRNL AUTH M.G.CUYPERS,J.P.SLAVISH,Z.RANKOVIC,S.W.WHITE JRNL TITL THE CRYSTAL STRUCTURE OF THE I38T MUTANT PA ENDONUCLEASE JRNL TITL 2 (2009/H1N1/CALIFORNIA) IN COMPLEX WITH COMPOUND SJ001023044 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH P.J.SLAVISH,M.G.CUYPERS,M.A.RIMMER,A.ABDOLVAHABI,T.JEEVAN, REMARK 1 AUTH 2 G.KUMAR,J.A.JARUSIEWICZ,S.VAITHIYALINGAM,J.C.JONES, REMARK 1 AUTH 3 J.J.BOWLING,J.E.PRICE,R.M.DUBOIS,J.MIN,R.J.WEBBY,Z.RANKOVIC, REMARK 1 AUTH 4 S.W.WHITE REMARK 1 TITL CHEMICAL SCAFFOLD RECYCLING: STRUCTURE-GUIDED CONVERSION OF REMARK 1 TITL 2 AN HIV INTEGRASE INHIBITOR INTO A POTENT INFLUENZA VIRUS REMARK 1 TITL 3 RNA-DEPENDENT RNA POLYMERASE INHIBITOR DESIGNED TO MINIMIZE REMARK 1 TITL 4 RESISTANCE POTENTIAL. REMARK 1 REF EUR.J.MED.CHEM. V. 247 15035 2023 REMARK 1 REFN ISSN 0223-5234 REMARK 1 PMID 36603507 REMARK 1 DOI 10.1016/J.EJMECH.2022.115035 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 73.91 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 3 NUMBER OF REFLECTIONS : 9357 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.229 REMARK 3 R VALUE (WORKING SET) : 0.227 REMARK 3 FREE R VALUE : 0.263 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.910 REMARK 3 FREE R VALUE TEST SET COUNT : 459 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 73.9100 - 3.6100 0.96 2989 180 0.1944 0.2292 REMARK 3 2 3.6100 - 2.8600 0.98 2933 159 0.2808 0.3125 REMARK 3 3 2.6000 - 2.5000 0.99 2976 120 0.3207 0.4419 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.465 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 38.419 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 67.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 85.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 1585 REMARK 3 ANGLE : 0.522 2148 REMARK 3 CHIRALITY : 0.040 218 REMARK 3 PLANARITY : 0.002 270 REMARK 3 DIHEDRAL : 7.005 234 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 13 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -2 THROUGH 10 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.8443 22.8962 3.5355 REMARK 3 T TENSOR REMARK 3 T11: 1.0520 T22: 0.7245 REMARK 3 T33: 0.5978 T12: -0.1982 REMARK 3 T13: 0.1218 T23: -0.0956 REMARK 3 L TENSOR REMARK 3 L11: 6.0534 L22: 1.1654 REMARK 3 L33: 0.8449 L12: -2.6116 REMARK 3 L13: 2.2754 L23: -1.0309 REMARK 3 S TENSOR REMARK 3 S11: 0.4365 S12: 2.1421 S13: 1.9996 REMARK 3 S21: -0.3087 S22: -0.1149 S23: 0.6141 REMARK 3 S31: -0.0200 S32: -0.0844 S33: -0.0596 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 11 THROUGH 31 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.7355 17.0956 4.4866 REMARK 3 T TENSOR REMARK 3 T11: 0.9800 T22: 0.7880 REMARK 3 T33: 0.7944 T12: 0.0419 REMARK 3 T13: 0.2124 T23: -0.0674 REMARK 3 L TENSOR REMARK 3 L11: 4.0931 L22: 1.8461 REMARK 3 L33: 7.3979 L12: 1.1467 REMARK 3 L13: 3.7572 L23: 3.4694 REMARK 3 S TENSOR REMARK 3 S11: 0.1014 S12: 0.6231 S13: -0.6376 REMARK 3 S21: -0.0802 S22: -0.0475 S23: -0.2412 REMARK 3 S31: 1.2506 S32: 0.9650 S33: -0.1952 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 32 THROUGH 50 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.7789 22.6236 14.1334 REMARK 3 T TENSOR REMARK 3 T11: 0.7824 T22: 0.5590 REMARK 3 T33: 0.7123 T12: -0.0752 REMARK 3 T13: 0.2347 T23: 0.0366 REMARK 3 L TENSOR REMARK 3 L11: 8.9174 L22: 7.8576 REMARK 3 L33: 5.2159 L12: 2.1928 REMARK 3 L13: 4.8698 L23: 5.2416 REMARK 3 S TENSOR REMARK 3 S11: -0.6486 S12: 0.3157 S13: -0.1870 REMARK 3 S21: -0.8479 S22: -0.0066 S23: 0.1230 REMARK 3 S31: -0.2011 S32: 0.4313 S33: 0.3433 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 51 THROUGH 83 ) REMARK 3 ORIGIN FOR THE GROUP (A): 47.7689 27.8608 19.7768 REMARK 3 T TENSOR REMARK 3 T11: 0.6633 T22: 0.5835 REMARK 3 T33: 0.6750 T12: -0.0577 REMARK 3 T13: 0.2289 T23: 0.1493 REMARK 3 L TENSOR REMARK 3 L11: 7.8814 L22: 2.0154 REMARK 3 L33: 4.7679 L12: -3.3910 REMARK 3 L13: -1.5608 L23: 6.7353 REMARK 3 S TENSOR REMARK 3 S11: 0.4772 S12: 0.3409 S13: 1.2346 REMARK 3 S21: 0.4085 S22: 1.0482 S23: -1.6871 REMARK 3 S31: -0.8394 S32: 1.0115 S33: -0.7047 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 84 THROUGH 98 ) REMARK 3 ORIGIN FOR THE GROUP (A): 56.1002 18.5348 18.9029 REMARK 3 T TENSOR REMARK 3 T11: 0.9333 T22: 0.6882 REMARK 3 T33: 0.7849 T12: 0.1786 REMARK 3 T13: 0.2263 T23: 0.2536 REMARK 3 L TENSOR REMARK 3 L11: 8.0814 L22: 2.5114 REMARK 3 L33: 3.4327 L12: 0.2237 REMARK 3 L13: 3.4789 L23: 1.5430 REMARK 3 S TENSOR REMARK 3 S11: -0.5279 S12: 0.7025 S13: -0.2795 REMARK 3 S21: -0.3942 S22: -0.5911 S23: -0.4146 REMARK 3 S31: 1.6604 S32: 1.2586 S33: 0.9845 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 99 THROUGH 108 ) REMARK 3 ORIGIN FOR THE GROUP (A): 50.0911 14.3327 23.2764 REMARK 3 T TENSOR REMARK 3 T11: 1.2963 T22: 0.3716 REMARK 3 T33: 0.7935 T12: -0.0796 REMARK 3 T13: 0.1990 T23: 0.3964 REMARK 3 L TENSOR REMARK 3 L11: 9.7910 L22: 3.5999 REMARK 3 L33: 2.0303 L12: -5.5885 REMARK 3 L13: -2.4877 L23: -0.8208 REMARK 3 S TENSOR REMARK 3 S11: 0.3037 S12: 0.3860 S13: -1.7142 REMARK 3 S21: 1.2828 S22: -0.1903 S23: 0.7970 REMARK 3 S31: 1.2280 S32: -1.8114 S33: -1.9069 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 109 THROUGH 115 ) REMARK 3 ORIGIN FOR THE GROUP (A): 49.6680 25.6433 28.0715 REMARK 3 T TENSOR REMARK 3 T11: 0.8680 T22: 0.6650 REMARK 3 T33: 0.6445 T12: 0.0057 REMARK 3 T13: 0.1186 T23: 0.2371 REMARK 3 L TENSOR REMARK 3 L11: 1.9924 L22: 2.0239 REMARK 3 L33: 0.8662 L12: 2.0161 REMARK 3 L13: -3.4416 L23: 3.0542 REMARK 3 S TENSOR REMARK 3 S11: -1.9358 S12: -2.7087 S13: 1.0224 REMARK 3 S21: 2.1820 S22: 0.3023 S23: -0.3144 REMARK 3 S31: 1.0328 S32: 0.7773 S33: -1.0383 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 116 THROUGH 126 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.2099 17.0650 23.7005 REMARK 3 T TENSOR REMARK 3 T11: 1.0909 T22: 0.3994 REMARK 3 T33: 0.7890 T12: -0.2788 REMARK 3 T13: 0.5517 T23: 0.3189 REMARK 3 L TENSOR REMARK 3 L11: 0.4357 L22: 2.1117 REMARK 3 L33: 3.5906 L12: -0.9753 REMARK 3 L13: 0.4127 L23: -1.0373 REMARK 3 S TENSOR REMARK 3 S11: 0.3333 S12: -0.2452 S13: -0.6262 REMARK 3 S21: 0.1638 S22: -0.2888 S23: 0.0943 REMARK 3 S31: 0.4075 S32: -0.9160 S33: -0.4693 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 127 THROUGH 138 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.9808 10.4334 27.2158 REMARK 3 T TENSOR REMARK 3 T11: 1.8593 T22: 0.7350 REMARK 3 T33: 0.9461 T12: -0.1782 REMARK 3 T13: 0.1194 T23: 0.2750 REMARK 3 L TENSOR REMARK 3 L11: 2.0121 L22: 0.5894 REMARK 3 L33: 7.0036 L12: -0.2099 REMARK 3 L13: 7.1491 L23: 1.0865 REMARK 3 S TENSOR REMARK 3 S11: 0.1828 S12: -1.9370 S13: -2.3815 REMARK 3 S21: -1.2167 S22: 0.2566 S23: 0.0164 REMARK 3 S31: 0.8245 S32: -1.0077 S33: -0.4794 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 139 THROUGH 149 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.9640 17.2364 28.0924 REMARK 3 T TENSOR REMARK 3 T11: 0.5884 T22: 0.5410 REMARK 3 T33: 0.5976 T12: -0.1942 REMARK 3 T13: 0.3158 T23: 0.1247 REMARK 3 L TENSOR REMARK 3 L11: 4.7648 L22: 6.8687 REMARK 3 L33: 4.8716 L12: -1.6420 REMARK 3 L13: 4.7253 L23: -0.9102 REMARK 3 S TENSOR REMARK 3 S11: 1.4692 S12: 0.3405 S13: 0.4104 REMARK 3 S21: -0.2551 S22: -0.9645 S23: -0.2460 REMARK 3 S31: -0.2409 S32: 0.0518 S33: -0.1795 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 150 THROUGH 164 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.9394 22.9169 30.2185 REMARK 3 T TENSOR REMARK 3 T11: 0.8906 T22: 0.6960 REMARK 3 T33: 0.6279 T12: -0.0858 REMARK 3 T13: 0.2546 T23: 0.1085 REMARK 3 L TENSOR REMARK 3 L11: 9.7932 L22: 2.2761 REMARK 3 L33: 8.0177 L12: -3.5536 REMARK 3 L13: 3.4603 L23: 1.4420 REMARK 3 S TENSOR REMARK 3 S11: 0.0353 S12: -1.1786 S13: -0.6257 REMARK 3 S21: 0.1076 S22: -0.3900 S23: -0.0701 REMARK 3 S31: 0.6347 S32: 0.1396 S33: 0.2150 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 165 THROUGH 184 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.2460 27.3449 19.1395 REMARK 3 T TENSOR REMARK 3 T11: 0.5172 T22: 0.5617 REMARK 3 T33: 0.5567 T12: -0.2552 REMARK 3 T13: 0.2788 T23: -0.0971 REMARK 3 L TENSOR REMARK 3 L11: 7.6901 L22: 2.8618 REMARK 3 L33: 7.4953 L12: 3.4255 REMARK 3 L13: 7.6134 L23: 3.7723 REMARK 3 S TENSOR REMARK 3 S11: -1.5950 S12: 0.1237 S13: 1.6750 REMARK 3 S21: -0.9053 S22: 0.2699 S23: 0.5798 REMARK 3 S31: -1.7539 S32: -0.1594 S33: -1.2623 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 185 THROUGH 195 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.8506 14.8898 12.2597 REMARK 3 T TENSOR REMARK 3 T11: 1.1384 T22: 1.0734 REMARK 3 T33: 0.9054 T12: -0.6571 REMARK 3 T13: 0.3137 T23: -0.1829 REMARK 3 L TENSOR REMARK 3 L11: 1.9853 L22: 4.6521 REMARK 3 L33: 1.9169 L12: -4.9444 REMARK 3 L13: 3.5918 L23: -0.4097 REMARK 3 S TENSOR REMARK 3 S11: 0.6251 S12: -1.9990 S13: -1.7050 REMARK 3 S21: 2.1472 S22: -0.1601 S23: 1.6385 REMARK 3 S31: 1.1575 S32: -1.7114 S33: -0.6228 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8E1Q COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-AUG-22. REMARK 100 THE DEPOSITION ID IS D_1000267663. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-APR-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9375 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 73.910 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.05200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 4.10 REMARK 200 R MERGE FOR SHELL (I) : 0.54700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 5VPT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.69 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.84 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES PH 7.8, 1 M AMMONIUM REMARK 280 SULFATE, 10 MM MNCL2, 10 MM MGCL2, 0.5% PVP K15, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 44.41850 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 44.41850 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 66.60450 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 44.41850 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 44.41850 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 66.60450 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 44.41850 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 44.41850 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 66.60450 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 44.41850 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 44.41850 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 66.60450 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 44.41850 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 44.41850 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 66.60450 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 44.41850 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 44.41850 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 66.60450 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 44.41850 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 44.41850 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 66.60450 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 44.41850 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 44.41850 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 66.60450 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A 196 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A -3 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 15 CD OE1 OE2 REMARK 470 LYS A 19 CE NZ REMARK 470 ASP A 27 CG OD1 OD2 REMARK 470 LYS A 29 NZ REMARK 470 ARG A 84 NE CZ NH1 NH2 REMARK 470 GLU A 101 CG CD OE1 OE2 REMARK 470 LYS A 102 CE NZ REMARK 470 LYS A 104 CG CD CE NZ REMARK 470 LYS A 113 CD CE NZ REMARK 470 LEU A 132 CG CD1 CD2 REMARK 470 LYS A 137 CD CE NZ REMARK 470 ILE A 138 CG1 CG2 CD1 REMARK 470 LYS A 139 CG CD CE NZ REMARK 470 GLU A 141 CG CD OE1 OE2 REMARK 470 LYS A 142 CG CD CE NZ REMARK 470 GLU A 165 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 125 -160.21 -103.16 REMARK 500 GLU A 141 -27.74 65.32 REMARK 500 ALA A 159 17.03 58.60 REMARK 500 THR A 162 -66.01 62.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 QQ4 A 204 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 201 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 41 NE2 REMARK 620 2 ASP A 108 OD2 96.4 REMARK 620 3 GLU A 119 OE2 172.5 88.6 REMARK 620 4 ILE A 120 O 80.1 82.7 95.2 REMARK 620 5 U0I A 203 O01 83.4 168.7 90.6 86.2 REMARK 620 6 U0I A 203 O01 81.7 170.6 92.4 87.9 2.7 REMARK 620 7 U0I A 203 O33 89.5 101.4 94.8 169.2 89.9 87.8 REMARK 620 8 U0I A 203 O33 91.8 101.8 92.5 171.2 89.5 87.5 2.4 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 202 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 80 OE1 REMARK 620 2 ASP A 108 OD1 105.3 REMARK 620 3 U0I A 203 O31 108.6 125.9 REMARK 620 4 U0I A 203 O31 109.5 127.2 2.5 REMARK 620 5 U0I A 203 O33 112.9 63.5 64.9 66.9 REMARK 620 6 U0I A 203 O33 114.5 64.9 63.1 65.0 2.3 REMARK 620 N 1 2 3 4 5 DBREF 8E1Q A 1 50 UNP C6H0Y9 C6H0Y9_9INFA 1 50 DBREF 8E1Q A 73 196 UNP C6H0Y9 C6H0Y9_9INFA 73 196 SEQADV 8E1Q MET A -19 UNP C6H0Y9 EXPRESSION TAG SEQADV 8E1Q GLY A -18 UNP C6H0Y9 EXPRESSION TAG SEQADV 8E1Q SER A -17 UNP C6H0Y9 EXPRESSION TAG SEQADV 8E1Q SER A -16 UNP C6H0Y9 EXPRESSION TAG SEQADV 8E1Q HIS A -15 UNP C6H0Y9 EXPRESSION TAG SEQADV 8E1Q HIS A -14 UNP C6H0Y9 EXPRESSION TAG SEQADV 8E1Q HIS A -13 UNP C6H0Y9 EXPRESSION TAG SEQADV 8E1Q HIS A -12 UNP C6H0Y9 EXPRESSION TAG SEQADV 8E1Q HIS A -11 UNP C6H0Y9 EXPRESSION TAG SEQADV 8E1Q HIS A -10 UNP C6H0Y9 EXPRESSION TAG SEQADV 8E1Q SER A -9 UNP C6H0Y9 EXPRESSION TAG SEQADV 8E1Q SER A -8 UNP C6H0Y9 EXPRESSION TAG SEQADV 8E1Q GLY A -7 UNP C6H0Y9 EXPRESSION TAG SEQADV 8E1Q LEU A -6 UNP C6H0Y9 EXPRESSION TAG SEQADV 8E1Q VAL A -5 UNP C6H0Y9 EXPRESSION TAG SEQADV 8E1Q PRO A -4 UNP C6H0Y9 EXPRESSION TAG SEQADV 8E1Q ARG A -3 UNP C6H0Y9 EXPRESSION TAG SEQADV 8E1Q GLY A -2 UNP C6H0Y9 EXPRESSION TAG SEQADV 8E1Q SER A -1 UNP C6H0Y9 EXPRESSION TAG SEQADV 8E1Q HIS A 0 UNP C6H0Y9 EXPRESSION TAG SEQADV 8E1Q THR A 38 UNP C6H0Y9 ILE 38 ENGINEERED MUTATION SEQADV 8E1Q GLY A 51 UNP C6H0Y9 LINKER SEQADV 8E1Q GLY A 52 UNP C6H0Y9 LINKER SEQADV 8E1Q SER A 53 UNP C6H0Y9 LINKER SEQRES 1 A 197 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 197 LEU VAL PRO ARG GLY SER HIS MET GLU ASP PHE VAL ARG SEQRES 3 A 197 GLN CYS PHE ASN PRO MET ILE VAL GLU LEU ALA GLU LYS SEQRES 4 A 197 ALA MET LYS GLU TYR GLY GLU ASP PRO LYS ILE GLU THR SEQRES 5 A 197 ASN LYS PHE ALA ALA THR CYS THR HIS LEU GLU VAL CYS SEQRES 6 A 197 PHE MET TYR SER ASP GLY GLY SER LYS HIS ARG PHE GLU SEQRES 7 A 197 ILE ILE GLU GLY ARG ASP ARG ILE MET ALA TRP THR VAL SEQRES 8 A 197 VAL ASN SER ILE CYS ASN THR THR GLY VAL GLU LYS PRO SEQRES 9 A 197 LYS PHE LEU PRO ASP LEU TYR ASP TYR LYS GLU ASN ARG SEQRES 10 A 197 PHE ILE GLU ILE GLY VAL THR ARG ARG GLU VAL HIS ILE SEQRES 11 A 197 TYR TYR LEU GLU LYS ALA ASN LYS ILE LYS SER GLU LYS SEQRES 12 A 197 THR HIS ILE HIS ILE PHE SER PHE THR GLY GLU GLU MET SEQRES 13 A 197 ALA THR LYS ALA ASP TYR THR LEU ASP GLU GLU SER ARG SEQRES 14 A 197 ALA ARG ILE LYS THR ARG LEU PHE THR ILE ARG GLN GLU SEQRES 15 A 197 MET ALA SER ARG SER LEU TRP ASP SER PHE ARG GLN SER SEQRES 16 A 197 GLU ARG HET MN A 201 1 HET MN A 202 1 HET U0I A 203 66 HET QQ4 A 204 41 HET SO4 A 205 5 HET SO4 A 206 5 HETNAM MN MANGANESE (II) ION HETNAM U0I 5-HYDROXY-N-[2-(4-HYDROXY-3-METHOXYPHENYL)ETHYL]-6-OXO- HETNAM 2 U0I 2-{[2-(TRIFLUOROMETHYL)PHENYL]METHYL}-1,6- HETNAM 3 U0I DIHYDROPYRIMIDINE-4-CARBOXAMIDE HETNAM QQ4 HEXA VINYLPYRROLIDONE K15 HETNAM SO4 SULFATE ION HETSYN QQ4 1,1',1'',1''',1'''',1'''''-[(3R,5R,7R,9S,11R)-DODECANE- HETSYN 2 QQ4 1,3,5,7,9,11-HEXAYL]HEXA(PYRROLIDIN-2-ONE) FORMUL 2 MN 2(MN 2+) FORMUL 4 U0I C22 H20 F3 N3 O5 FORMUL 5 QQ4 C36 H56 N6 O6 FORMUL 6 SO4 2(O4 S 2-) FORMUL 8 HOH *29(H2 O) HELIX 1 AA1 SER A -1 PHE A 9 1 11 HELIX 2 AA2 ASN A 10 TYR A 24 1 15 HELIX 3 AA3 GLU A 31 GLY A 51 1 21 HELIX 4 AA4 ASP A 83 GLY A 99 1 17 HELIX 5 AA5 GLU A 126 ILE A 138 1 13 HELIX 6 AA6 LYS A 158 ASP A 160 5 3 HELIX 7 AA7 ASP A 164 ARG A 185 1 22 HELIX 8 AA8 LEU A 187 GLU A 195 1 9 SHEET 1 AA1 5 PHE A 76 ILE A 78 0 SHEET 2 AA1 5 LEU A 109 ASP A 111 -1 O TYR A 110 N GLU A 77 SHEET 3 AA1 5 ARG A 116 THR A 123 -1 O ARG A 116 N ASP A 111 SHEET 4 AA1 5 HIS A 144 SER A 149 1 O HIS A 144 N PHE A 117 SHEET 5 AA1 5 GLU A 154 ALA A 156 -1 O MET A 155 N ILE A 147 LINK NE2 HIS A 41 MN MN A 201 1555 1555 2.30 LINK OE1 GLU A 80 MN MN A 202 1555 1555 2.35 LINK OD2 ASP A 108 MN MN A 201 1555 1555 2.22 LINK OD1 ASP A 108 MN MN A 202 1555 1555 2.02 LINK OE2 GLU A 119 MN MN A 201 1555 1555 2.16 LINK O ILE A 120 MN MN A 201 1555 1555 2.11 LINK MN MN A 201 O01AU0I A 203 1555 1555 2.07 LINK MN MN A 201 O01BU0I A 203 1555 1555 2.08 LINK MN MN A 201 O33AU0I A 203 1555 1555 1.97 LINK MN MN A 201 O33BU0I A 203 1555 1555 2.03 LINK MN MN A 202 O31AU0I A 203 1555 1555 2.03 LINK MN MN A 202 O31BU0I A 203 1555 1555 2.16 LINK MN MN A 202 O33AU0I A 203 1555 1555 2.69 LINK MN MN A 202 O33BU0I A 203 1555 1555 2.69 CRYST1 88.837 88.837 133.209 90.00 90.00 90.00 I 4 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011257 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011257 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007507 0.00000