data_8E2J # _entry.id 8E2J # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.368 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8E2J pdb_00008e2j 10.2210/pdb8e2j/pdb WWPDB D_1000267622 ? ? EMDB EMD-27838 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type EMDB 'cryo-EM structure of BIRC6 (consensus)' EMD-27832 'other EM volume' EMDB 'cryo-EM structure of helical arch of BIRC6 (from local refinement 1)' EMD-27833 'other EM volume' EMDB 'cryo-EM structure of N-terminal arm of BIRC6 (from local refinement 2)' EMD-27834 'other EM volume' EMDB 'cryo-EM structure of C-terminal arm of BIRC6 (from local refinement 4)' EMD-27836 'other EM volume' EMDB 'cryo-EM structure of N-terminal arm (aa68-966) of BIRC6 (from local refinement 3)' EMD-27835 'other EM volume' EMDB 'cryo-EM structure of BIRC6/Smac' EMD-27837 'other EM volume' EMDB 'cryo-EM density of BIRC6/casp-3 (clusters)' EMD-27839 'other EM volume' EMDB 'cryo-EM density of BIRC6/casp-7 (clusters)' EMD-27840 'other EM volume' EMDB 'cryo-EM structure of BIRC6/Smac (from local refinement 1)' EMD-27838 'associated EM volume' EMDB 'cryo-EM structure of BIRC6 (consensus)' EMD-27841 'other EM volume' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8E2J _pdbx_database_status.recvd_initial_deposition_date 2022-08-15 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Hunkeler, M.' 1 0000-0003-0246-1188 'Fischer, E.S.' 2 0000-0001-7337-6306 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Science _citation.journal_id_ASTM SCIEAS _citation.journal_id_CSD 0038 _citation.journal_id_ISSN 1095-9203 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 379 _citation.language ? _citation.page_first 1105 _citation.page_last 1111 _citation.title 'Structures of BIRC6-client complexes provide a mechanism of SMAC-mediated release of caspases.' _citation.year 2023 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1126/science.ade5750 _citation.pdbx_database_id_PubMed 36758104 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hunkeler, M.' 1 ? primary 'Jin, C.Y.' 2 ? primary 'Fischer, E.S.' 3 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 8E2J _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8E2J _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Diablo IAP-binding mitochondrial protein' 22161.615 2 ? ? ? ? 2 polymer man 'Baculoviral IAP repeat-containing protein 6' 4868.993 2 6.-.-.- ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Diablo homolog,mitochondrial,Direct IAP-binding protein with low pI,Second mitochondria-derived activator of caspase,Smac' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MAVPIAQKSEPHSLSSEALMRRAVSLVTDSTSTFLSQTTYALIEAITEYTKAVYTLTSLYRQYTSLLGKMNSEEEDEVWQ VIIGARAEMTSKHQEYLKLETTWMTAVGLSEMAAEAAYQTGADQASITARNHIQLVKLQVEEVHQLSRKAETKLAEAQIE ELRQKTQEEGEERAESEQEAYLREDHHHHHHHHH ; ;MAVPIAQKSEPHSLSSEALMRRAVSLVTDSTSTFLSQTTYALIEAITEYTKAVYTLTSLYRQYTSLLGKMNSEEEDEVWQ VIIGARAEMTSKHQEYLKLETTWMTAVGLSEMAAEAAYQTGADQASITARNHIQLVKLQVEEVHQLSRKAETKLAEAQIE ELRQKTQEEGEERAESEQEAYLREDHHHHHHHHH ; A,B ? 2 'polypeptide(L)' no no ;(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) ; XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX C,D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 VAL n 1 4 PRO n 1 5 ILE n 1 6 ALA n 1 7 GLN n 1 8 LYS n 1 9 SER n 1 10 GLU n 1 11 PRO n 1 12 HIS n 1 13 SER n 1 14 LEU n 1 15 SER n 1 16 SER n 1 17 GLU n 1 18 ALA n 1 19 LEU n 1 20 MET n 1 21 ARG n 1 22 ARG n 1 23 ALA n 1 24 VAL n 1 25 SER n 1 26 LEU n 1 27 VAL n 1 28 THR n 1 29 ASP n 1 30 SER n 1 31 THR n 1 32 SER n 1 33 THR n 1 34 PHE n 1 35 LEU n 1 36 SER n 1 37 GLN n 1 38 THR n 1 39 THR n 1 40 TYR n 1 41 ALA n 1 42 LEU n 1 43 ILE n 1 44 GLU n 1 45 ALA n 1 46 ILE n 1 47 THR n 1 48 GLU n 1 49 TYR n 1 50 THR n 1 51 LYS n 1 52 ALA n 1 53 VAL n 1 54 TYR n 1 55 THR n 1 56 LEU n 1 57 THR n 1 58 SER n 1 59 LEU n 1 60 TYR n 1 61 ARG n 1 62 GLN n 1 63 TYR n 1 64 THR n 1 65 SER n 1 66 LEU n 1 67 LEU n 1 68 GLY n 1 69 LYS n 1 70 MET n 1 71 ASN n 1 72 SER n 1 73 GLU n 1 74 GLU n 1 75 GLU n 1 76 ASP n 1 77 GLU n 1 78 VAL n 1 79 TRP n 1 80 GLN n 1 81 VAL n 1 82 ILE n 1 83 ILE n 1 84 GLY n 1 85 ALA n 1 86 ARG n 1 87 ALA n 1 88 GLU n 1 89 MET n 1 90 THR n 1 91 SER n 1 92 LYS n 1 93 HIS n 1 94 GLN n 1 95 GLU n 1 96 TYR n 1 97 LEU n 1 98 LYS n 1 99 LEU n 1 100 GLU n 1 101 THR n 1 102 THR n 1 103 TRP n 1 104 MET n 1 105 THR n 1 106 ALA n 1 107 VAL n 1 108 GLY n 1 109 LEU n 1 110 SER n 1 111 GLU n 1 112 MET n 1 113 ALA n 1 114 ALA n 1 115 GLU n 1 116 ALA n 1 117 ALA n 1 118 TYR n 1 119 GLN n 1 120 THR n 1 121 GLY n 1 122 ALA n 1 123 ASP n 1 124 GLN n 1 125 ALA n 1 126 SER n 1 127 ILE n 1 128 THR n 1 129 ALA n 1 130 ARG n 1 131 ASN n 1 132 HIS n 1 133 ILE n 1 134 GLN n 1 135 LEU n 1 136 VAL n 1 137 LYS n 1 138 LEU n 1 139 GLN n 1 140 VAL n 1 141 GLU n 1 142 GLU n 1 143 VAL n 1 144 HIS n 1 145 GLN n 1 146 LEU n 1 147 SER n 1 148 ARG n 1 149 LYS n 1 150 ALA n 1 151 GLU n 1 152 THR n 1 153 LYS n 1 154 LEU n 1 155 ALA n 1 156 GLU n 1 157 ALA n 1 158 GLN n 1 159 ILE n 1 160 GLU n 1 161 GLU n 1 162 LEU n 1 163 ARG n 1 164 GLN n 1 165 LYS n 1 166 THR n 1 167 GLN n 1 168 GLU n 1 169 GLU n 1 170 GLY n 1 171 GLU n 1 172 GLU n 1 173 ARG n 1 174 ALA n 1 175 GLU n 1 176 SER n 1 177 GLU n 1 178 GLN n 1 179 GLU n 1 180 ALA n 1 181 TYR n 1 182 LEU n 1 183 ARG n 1 184 GLU n 1 185 ASP n 1 186 HIS n 1 187 HIS n 1 188 HIS n 1 189 HIS n 1 190 HIS n 1 191 HIS n 1 192 HIS n 1 193 HIS n 1 194 HIS n 2 1 UNK n 2 2 UNK n 2 3 UNK n 2 4 UNK n 2 5 UNK n 2 6 UNK n 2 7 UNK n 2 8 UNK n 2 9 UNK n 2 10 UNK n 2 11 UNK n 2 12 UNK n 2 13 UNK n 2 14 UNK n 2 15 UNK n 2 16 UNK n 2 17 UNK n 2 18 UNK n 2 19 UNK n 2 20 UNK n 2 21 UNK n 2 22 UNK n 2 23 UNK n 2 24 UNK n 2 25 UNK n 2 26 UNK n 2 27 UNK n 2 28 UNK n 2 29 UNK n 2 30 UNK n 2 31 UNK n 2 32 UNK n 2 33 UNK n 2 34 UNK n 2 35 UNK n 2 36 UNK n 2 37 UNK n 2 38 UNK n 2 39 UNK n 2 40 UNK n 2 41 UNK n 2 42 UNK n 2 43 UNK n 2 44 UNK n 2 45 UNK n 2 46 UNK n 2 47 UNK n 2 48 UNK n 2 49 UNK n 2 50 UNK n 2 51 UNK n 2 52 UNK n 2 53 UNK n 2 54 UNK n 2 55 UNK n 2 56 UNK n 2 57 UNK n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 194 human ? 'DIABLO, SMAC' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? LOBSTR ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 57 Human ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? Human 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? Expi293 ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP DBLOH_HUMAN Q9NR28 ? 1 ;AVPIAQKSEPHSLSSEALMRRAVSLVTDSTSTFLSQTTYALIEAITEYTKAVYTLTSLYRQYTSLLGKMNSEEEDEVWQV IIGARAEMTSKHQEYLKLETTWMTAVGLSEMAAEAAYQTGADQASITARNHIQLVKLQVEEVHQLSRKAETKLAEAQIEE LRQKTQEEGEERAESEQEAYLRED ; 56 2 PDB 8E2J 8E2J ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8E2J A 2 ? 185 ? Q9NR28 56 ? 239 ? 1 184 2 1 8E2J B 2 ? 185 ? Q9NR28 56 ? 239 ? 1 184 3 2 8E2J C 1 ? 57 ? 8E2J 51 ? 107 ? 51 107 4 2 8E2J D 1 ? 57 ? 8E2J 51 ? 107 ? 51 107 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 8E2J MET A 1 ? UNP Q9NR28 ? ? 'initiating methionine' 0 1 1 8E2J HIS A 186 ? UNP Q9NR28 ? ? 'expression tag' 185 2 1 8E2J HIS A 187 ? UNP Q9NR28 ? ? 'expression tag' 186 3 1 8E2J HIS A 188 ? UNP Q9NR28 ? ? 'expression tag' 187 4 1 8E2J HIS A 189 ? UNP Q9NR28 ? ? 'expression tag' 188 5 1 8E2J HIS A 190 ? UNP Q9NR28 ? ? 'expression tag' 189 6 1 8E2J HIS A 191 ? UNP Q9NR28 ? ? 'expression tag' 190 7 1 8E2J HIS A 192 ? UNP Q9NR28 ? ? 'expression tag' 191 8 1 8E2J HIS A 193 ? UNP Q9NR28 ? ? 'expression tag' 192 9 1 8E2J HIS A 194 ? UNP Q9NR28 ? ? 'expression tag' 193 10 2 8E2J MET B 1 ? UNP Q9NR28 ? ? 'initiating methionine' 0 11 2 8E2J HIS B 186 ? UNP Q9NR28 ? ? 'expression tag' 185 12 2 8E2J HIS B 187 ? UNP Q9NR28 ? ? 'expression tag' 186 13 2 8E2J HIS B 188 ? UNP Q9NR28 ? ? 'expression tag' 187 14 2 8E2J HIS B 189 ? UNP Q9NR28 ? ? 'expression tag' 188 15 2 8E2J HIS B 190 ? UNP Q9NR28 ? ? 'expression tag' 189 16 2 8E2J HIS B 191 ? UNP Q9NR28 ? ? 'expression tag' 190 17 2 8E2J HIS B 192 ? UNP Q9NR28 ? ? 'expression tag' 191 18 2 8E2J HIS B 193 ? UNP Q9NR28 ? ? 'expression tag' 192 19 2 8E2J HIS B 194 ? UNP Q9NR28 ? ? 'expression tag' 193 20 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 UNK 'L-peptide linking' . UNKNOWN ? 'C4 H9 N O2' 103.120 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8E2J _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.entry_id 8E2J _refine.pdbx_diffrn_id ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high . _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.003 ? 3348 ? f_bond_d ? ? 'ELECTRON MICROSCOPY' ? 0.542 ? 4548 ? f_angle_d ? ? 'ELECTRON MICROSCOPY' ? 15.882 ? 1156 ? f_dihedral_angle_d ? ? 'ELECTRON MICROSCOPY' ? 0.026 ? 554 ? f_chiral_restr ? ? 'ELECTRON MICROSCOPY' ? 0.008 ? 594 ? f_plane_restr ? ? # _struct.entry_id 8E2J _struct.title 'Cryo-EM structure of BIRC6/Smac (from local refinement 1)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8E2J _struct_keywords.text 'Ubiquitin, E3 ligase, Apoptosis, Autophagy, IAP, LIGASE' _struct_keywords.pdbx_keywords LIGASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 13 ? LEU A 66 ? SER A 12 LEU A 65 1 ? 54 HELX_P HELX_P2 AA2 GLU A 74 ? GLY A 121 ? GLU A 73 GLY A 120 1 ? 48 HELX_P HELX_P3 AA3 ALA A 122 ? TYR A 181 ? ALA A 121 TYR A 180 1 ? 60 HELX_P HELX_P4 AA4 LEU B 14 ? LEU B 66 ? LEU B 13 LEU B 65 1 ? 53 HELX_P HELX_P5 AA5 LEU B 67 ? MET B 70 ? LEU B 66 MET B 69 5 ? 4 HELX_P HELX_P6 AA6 ASN B 71 ? THR B 120 ? ASN B 70 THR B 119 1 ? 50 HELX_P HELX_P7 AA7 ALA B 122 ? TYR B 181 ? ALA B 121 TYR B 180 1 ? 60 HELX_P HELX_P8 AA8 UNK C 2 ? UNK C 57 ? UNK C 52 UNK C 107 1 ? 56 HELX_P HELX_P9 AA9 UNK D 2 ? UNK D 57 ? UNK D 52 UNK D 107 1 ? 56 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _atom_sites.entry_id 8E2J _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 0 ? ? ? A . n A 1 2 ALA 2 1 ? ? ? A . n A 1 3 VAL 3 2 ? ? ? A . n A 1 4 PRO 4 3 ? ? ? A . n A 1 5 ILE 5 4 ? ? ? A . n A 1 6 ALA 6 5 ? ? ? A . n A 1 7 GLN 7 6 ? ? ? A . n A 1 8 LYS 8 7 ? ? ? A . n A 1 9 SER 9 8 ? ? ? A . n A 1 10 GLU 10 9 ? ? ? A . n A 1 11 PRO 11 10 ? ? ? A . n A 1 12 HIS 12 11 ? ? ? A . n A 1 13 SER 13 12 12 SER SER A . n A 1 14 LEU 14 13 13 LEU LEU A . n A 1 15 SER 15 14 14 SER SER A . n A 1 16 SER 16 15 15 SER SER A . n A 1 17 GLU 17 16 16 GLU GLU A . n A 1 18 ALA 18 17 17 ALA ALA A . n A 1 19 LEU 19 18 18 LEU LEU A . n A 1 20 MET 20 19 19 MET MET A . n A 1 21 ARG 21 20 20 ARG ARG A . n A 1 22 ARG 22 21 21 ARG ARG A . n A 1 23 ALA 23 22 22 ALA ALA A . n A 1 24 VAL 24 23 23 VAL VAL A . n A 1 25 SER 25 24 24 SER SER A . n A 1 26 LEU 26 25 25 LEU LEU A . n A 1 27 VAL 27 26 26 VAL VAL A . n A 1 28 THR 28 27 27 THR THR A . n A 1 29 ASP 29 28 28 ASP ASP A . n A 1 30 SER 30 29 29 SER SER A . n A 1 31 THR 31 30 30 THR THR A . n A 1 32 SER 32 31 31 SER SER A . n A 1 33 THR 33 32 32 THR THR A . n A 1 34 PHE 34 33 33 PHE PHE A . n A 1 35 LEU 35 34 34 LEU LEU A . n A 1 36 SER 36 35 35 SER SER A . n A 1 37 GLN 37 36 36 GLN GLN A . n A 1 38 THR 38 37 37 THR THR A . n A 1 39 THR 39 38 38 THR THR A . n A 1 40 TYR 40 39 39 TYR TYR A . n A 1 41 ALA 41 40 40 ALA ALA A . n A 1 42 LEU 42 41 41 LEU LEU A . n A 1 43 ILE 43 42 42 ILE ILE A . n A 1 44 GLU 44 43 43 GLU GLU A . n A 1 45 ALA 45 44 44 ALA ALA A . n A 1 46 ILE 46 45 45 ILE ILE A . n A 1 47 THR 47 46 46 THR THR A . n A 1 48 GLU 48 47 47 GLU GLU A . n A 1 49 TYR 49 48 48 TYR TYR A . n A 1 50 THR 50 49 49 THR THR A . n A 1 51 LYS 51 50 50 LYS LYS A . n A 1 52 ALA 52 51 51 ALA ALA A . n A 1 53 VAL 53 52 52 VAL VAL A . n A 1 54 TYR 54 53 53 TYR TYR A . n A 1 55 THR 55 54 54 THR THR A . n A 1 56 LEU 56 55 55 LEU LEU A . n A 1 57 THR 57 56 56 THR THR A . n A 1 58 SER 58 57 57 SER SER A . n A 1 59 LEU 59 58 58 LEU LEU A . n A 1 60 TYR 60 59 59 TYR TYR A . n A 1 61 ARG 61 60 60 ARG ARG A . n A 1 62 GLN 62 61 61 GLN GLN A . n A 1 63 TYR 63 62 62 TYR TYR A . n A 1 64 THR 64 63 63 THR THR A . n A 1 65 SER 65 64 64 SER SER A . n A 1 66 LEU 66 65 65 LEU LEU A . n A 1 67 LEU 67 66 66 LEU LEU A . n A 1 68 GLY 68 67 67 GLY GLY A . n A 1 69 LYS 69 68 68 LYS LYS A . n A 1 70 MET 70 69 69 MET MET A . n A 1 71 ASN 71 70 70 ASN ASN A . n A 1 72 SER 72 71 71 SER SER A . n A 1 73 GLU 73 72 72 GLU GLU A . n A 1 74 GLU 74 73 73 GLU GLU A . n A 1 75 GLU 75 74 74 GLU GLU A . n A 1 76 ASP 76 75 75 ASP ASP A . n A 1 77 GLU 77 76 76 GLU GLU A . n A 1 78 VAL 78 77 77 VAL VAL A . n A 1 79 TRP 79 78 78 TRP TRP A . n A 1 80 GLN 80 79 79 GLN GLN A . n A 1 81 VAL 81 80 80 VAL VAL A . n A 1 82 ILE 82 81 81 ILE ILE A . n A 1 83 ILE 83 82 82 ILE ILE A . n A 1 84 GLY 84 83 83 GLY GLY A . n A 1 85 ALA 85 84 84 ALA ALA A . n A 1 86 ARG 86 85 85 ARG ARG A . n A 1 87 ALA 87 86 86 ALA ALA A . n A 1 88 GLU 88 87 87 GLU GLU A . n A 1 89 MET 89 88 88 MET MET A . n A 1 90 THR 90 89 89 THR THR A . n A 1 91 SER 91 90 90 SER SER A . n A 1 92 LYS 92 91 91 LYS LYS A . n A 1 93 HIS 93 92 92 HIS HIS A . n A 1 94 GLN 94 93 93 GLN GLN A . n A 1 95 GLU 95 94 94 GLU GLU A . n A 1 96 TYR 96 95 95 TYR TYR A . n A 1 97 LEU 97 96 96 LEU LEU A . n A 1 98 LYS 98 97 97 LYS LYS A . n A 1 99 LEU 99 98 98 LEU LEU A . n A 1 100 GLU 100 99 99 GLU GLU A . n A 1 101 THR 101 100 100 THR THR A . n A 1 102 THR 102 101 101 THR THR A . n A 1 103 TRP 103 102 102 TRP TRP A . n A 1 104 MET 104 103 103 MET MET A . n A 1 105 THR 105 104 104 THR THR A . n A 1 106 ALA 106 105 105 ALA ALA A . n A 1 107 VAL 107 106 106 VAL VAL A . n A 1 108 GLY 108 107 107 GLY GLY A . n A 1 109 LEU 109 108 108 LEU LEU A . n A 1 110 SER 110 109 109 SER SER A . n A 1 111 GLU 111 110 110 GLU GLU A . n A 1 112 MET 112 111 111 MET MET A . n A 1 113 ALA 113 112 112 ALA ALA A . n A 1 114 ALA 114 113 113 ALA ALA A . n A 1 115 GLU 115 114 114 GLU GLU A . n A 1 116 ALA 116 115 115 ALA ALA A . n A 1 117 ALA 117 116 116 ALA ALA A . n A 1 118 TYR 118 117 117 TYR TYR A . n A 1 119 GLN 119 118 118 GLN GLN A . n A 1 120 THR 120 119 119 THR THR A . n A 1 121 GLY 121 120 120 GLY GLY A . n A 1 122 ALA 122 121 121 ALA ALA A . n A 1 123 ASP 123 122 122 ASP ASP A . n A 1 124 GLN 124 123 123 GLN GLN A . n A 1 125 ALA 125 124 124 ALA ALA A . n A 1 126 SER 126 125 125 SER SER A . n A 1 127 ILE 127 126 126 ILE ILE A . n A 1 128 THR 128 127 127 THR THR A . n A 1 129 ALA 129 128 128 ALA ALA A . n A 1 130 ARG 130 129 129 ARG ARG A . n A 1 131 ASN 131 130 130 ASN ASN A . n A 1 132 HIS 132 131 131 HIS HIS A . n A 1 133 ILE 133 132 132 ILE ILE A . n A 1 134 GLN 134 133 133 GLN GLN A . n A 1 135 LEU 135 134 134 LEU LEU A . n A 1 136 VAL 136 135 135 VAL VAL A . n A 1 137 LYS 137 136 136 LYS LYS A . n A 1 138 LEU 138 137 137 LEU LEU A . n A 1 139 GLN 139 138 138 GLN GLN A . n A 1 140 VAL 140 139 139 VAL VAL A . n A 1 141 GLU 141 140 140 GLU GLU A . n A 1 142 GLU 142 141 141 GLU GLU A . n A 1 143 VAL 143 142 142 VAL VAL A . n A 1 144 HIS 144 143 143 HIS HIS A . n A 1 145 GLN 145 144 144 GLN GLN A . n A 1 146 LEU 146 145 145 LEU LEU A . n A 1 147 SER 147 146 146 SER SER A . n A 1 148 ARG 148 147 147 ARG ARG A . n A 1 149 LYS 149 148 148 LYS LYS A . n A 1 150 ALA 150 149 149 ALA ALA A . n A 1 151 GLU 151 150 150 GLU GLU A . n A 1 152 THR 152 151 151 THR THR A . n A 1 153 LYS 153 152 152 LYS LYS A . n A 1 154 LEU 154 153 153 LEU LEU A . n A 1 155 ALA 155 154 154 ALA ALA A . n A 1 156 GLU 156 155 155 GLU GLU A . n A 1 157 ALA 157 156 156 ALA ALA A . n A 1 158 GLN 158 157 157 GLN GLN A . n A 1 159 ILE 159 158 158 ILE ILE A . n A 1 160 GLU 160 159 159 GLU GLU A . n A 1 161 GLU 161 160 160 GLU GLU A . n A 1 162 LEU 162 161 161 LEU LEU A . n A 1 163 ARG 163 162 162 ARG ARG A . n A 1 164 GLN 164 163 163 GLN GLN A . n A 1 165 LYS 165 164 164 LYS LYS A . n A 1 166 THR 166 165 165 THR THR A . n A 1 167 GLN 167 166 166 GLN GLN A . n A 1 168 GLU 168 167 167 GLU GLU A . n A 1 169 GLU 169 168 168 GLU GLU A . n A 1 170 GLY 170 169 169 GLY GLY A . n A 1 171 GLU 171 170 170 GLU GLU A . n A 1 172 GLU 172 171 171 GLU GLU A . n A 1 173 ARG 173 172 172 ARG ARG A . n A 1 174 ALA 174 173 173 ALA ALA A . n A 1 175 GLU 175 174 174 GLU GLU A . n A 1 176 SER 176 175 175 SER SER A . n A 1 177 GLU 177 176 176 GLU GLU A . n A 1 178 GLN 178 177 177 GLN GLN A . n A 1 179 GLU 179 178 178 GLU GLU A . n A 1 180 ALA 180 179 179 ALA ALA A . n A 1 181 TYR 181 180 180 TYR TYR A . n A 1 182 LEU 182 181 181 LEU LEU A . n A 1 183 ARG 183 182 182 ARG ARG A . n A 1 184 GLU 184 183 183 GLU GLU A . n A 1 185 ASP 185 184 184 ASP ASP A . n A 1 186 HIS 186 185 ? ? ? A . n A 1 187 HIS 187 186 ? ? ? A . n A 1 188 HIS 188 187 ? ? ? A . n A 1 189 HIS 189 188 ? ? ? A . n A 1 190 HIS 190 189 ? ? ? A . n A 1 191 HIS 191 190 ? ? ? A . n A 1 192 HIS 192 191 ? ? ? A . n A 1 193 HIS 193 192 ? ? ? A . n A 1 194 HIS 194 193 ? ? ? A . n B 1 1 MET 1 0 ? ? ? B . n B 1 2 ALA 2 1 ? ? ? B . n B 1 3 VAL 3 2 ? ? ? B . n B 1 4 PRO 4 3 ? ? ? B . n B 1 5 ILE 5 4 ? ? ? B . n B 1 6 ALA 6 5 ? ? ? B . n B 1 7 GLN 7 6 ? ? ? B . n B 1 8 LYS 8 7 ? ? ? B . n B 1 9 SER 9 8 ? ? ? B . n B 1 10 GLU 10 9 ? ? ? B . n B 1 11 PRO 11 10 ? ? ? B . n B 1 12 HIS 12 11 ? ? ? B . n B 1 13 SER 13 12 12 SER SER B . n B 1 14 LEU 14 13 13 LEU LEU B . n B 1 15 SER 15 14 14 SER SER B . n B 1 16 SER 16 15 15 SER SER B . n B 1 17 GLU 17 16 16 GLU GLU B . n B 1 18 ALA 18 17 17 ALA ALA B . n B 1 19 LEU 19 18 18 LEU LEU B . n B 1 20 MET 20 19 19 MET MET B . n B 1 21 ARG 21 20 20 ARG ARG B . n B 1 22 ARG 22 21 21 ARG ARG B . n B 1 23 ALA 23 22 22 ALA ALA B . n B 1 24 VAL 24 23 23 VAL VAL B . n B 1 25 SER 25 24 24 SER SER B . n B 1 26 LEU 26 25 25 LEU LEU B . n B 1 27 VAL 27 26 26 VAL VAL B . n B 1 28 THR 28 27 27 THR THR B . n B 1 29 ASP 29 28 28 ASP ASP B . n B 1 30 SER 30 29 29 SER SER B . n B 1 31 THR 31 30 30 THR THR B . n B 1 32 SER 32 31 31 SER SER B . n B 1 33 THR 33 32 32 THR THR B . n B 1 34 PHE 34 33 33 PHE PHE B . n B 1 35 LEU 35 34 34 LEU LEU B . n B 1 36 SER 36 35 35 SER SER B . n B 1 37 GLN 37 36 36 GLN GLN B . n B 1 38 THR 38 37 37 THR THR B . n B 1 39 THR 39 38 38 THR THR B . n B 1 40 TYR 40 39 39 TYR TYR B . n B 1 41 ALA 41 40 40 ALA ALA B . n B 1 42 LEU 42 41 41 LEU LEU B . n B 1 43 ILE 43 42 42 ILE ILE B . n B 1 44 GLU 44 43 43 GLU GLU B . n B 1 45 ALA 45 44 44 ALA ALA B . n B 1 46 ILE 46 45 45 ILE ILE B . n B 1 47 THR 47 46 46 THR THR B . n B 1 48 GLU 48 47 47 GLU GLU B . n B 1 49 TYR 49 48 48 TYR TYR B . n B 1 50 THR 50 49 49 THR THR B . n B 1 51 LYS 51 50 50 LYS LYS B . n B 1 52 ALA 52 51 51 ALA ALA B . n B 1 53 VAL 53 52 52 VAL VAL B . n B 1 54 TYR 54 53 53 TYR TYR B . n B 1 55 THR 55 54 54 THR THR B . n B 1 56 LEU 56 55 55 LEU LEU B . n B 1 57 THR 57 56 56 THR THR B . n B 1 58 SER 58 57 57 SER SER B . n B 1 59 LEU 59 58 58 LEU LEU B . n B 1 60 TYR 60 59 59 TYR TYR B . n B 1 61 ARG 61 60 60 ARG ARG B . n B 1 62 GLN 62 61 61 GLN GLN B . n B 1 63 TYR 63 62 62 TYR TYR B . n B 1 64 THR 64 63 63 THR THR B . n B 1 65 SER 65 64 64 SER SER B . n B 1 66 LEU 66 65 65 LEU LEU B . n B 1 67 LEU 67 66 66 LEU LEU B . n B 1 68 GLY 68 67 67 GLY GLY B . n B 1 69 LYS 69 68 68 LYS LYS B . n B 1 70 MET 70 69 69 MET MET B . n B 1 71 ASN 71 70 70 ASN ASN B . n B 1 72 SER 72 71 71 SER SER B . n B 1 73 GLU 73 72 72 GLU GLU B . n B 1 74 GLU 74 73 73 GLU GLU B . n B 1 75 GLU 75 74 74 GLU GLU B . n B 1 76 ASP 76 75 75 ASP ASP B . n B 1 77 GLU 77 76 76 GLU GLU B . n B 1 78 VAL 78 77 77 VAL VAL B . n B 1 79 TRP 79 78 78 TRP TRP B . n B 1 80 GLN 80 79 79 GLN GLN B . n B 1 81 VAL 81 80 80 VAL VAL B . n B 1 82 ILE 82 81 81 ILE ILE B . n B 1 83 ILE 83 82 82 ILE ILE B . n B 1 84 GLY 84 83 83 GLY GLY B . n B 1 85 ALA 85 84 84 ALA ALA B . n B 1 86 ARG 86 85 85 ARG ARG B . n B 1 87 ALA 87 86 86 ALA ALA B . n B 1 88 GLU 88 87 87 GLU GLU B . n B 1 89 MET 89 88 88 MET MET B . n B 1 90 THR 90 89 89 THR THR B . n B 1 91 SER 91 90 90 SER SER B . n B 1 92 LYS 92 91 91 LYS LYS B . n B 1 93 HIS 93 92 92 HIS HIS B . n B 1 94 GLN 94 93 93 GLN GLN B . n B 1 95 GLU 95 94 94 GLU GLU B . n B 1 96 TYR 96 95 95 TYR TYR B . n B 1 97 LEU 97 96 96 LEU LEU B . n B 1 98 LYS 98 97 97 LYS LYS B . n B 1 99 LEU 99 98 98 LEU LEU B . n B 1 100 GLU 100 99 99 GLU GLU B . n B 1 101 THR 101 100 100 THR THR B . n B 1 102 THR 102 101 101 THR THR B . n B 1 103 TRP 103 102 102 TRP TRP B . n B 1 104 MET 104 103 103 MET MET B . n B 1 105 THR 105 104 104 THR THR B . n B 1 106 ALA 106 105 105 ALA ALA B . n B 1 107 VAL 107 106 106 VAL VAL B . n B 1 108 GLY 108 107 107 GLY GLY B . n B 1 109 LEU 109 108 108 LEU LEU B . n B 1 110 SER 110 109 109 SER SER B . n B 1 111 GLU 111 110 110 GLU GLU B . n B 1 112 MET 112 111 111 MET MET B . n B 1 113 ALA 113 112 112 ALA ALA B . n B 1 114 ALA 114 113 113 ALA ALA B . n B 1 115 GLU 115 114 114 GLU GLU B . n B 1 116 ALA 116 115 115 ALA ALA B . n B 1 117 ALA 117 116 116 ALA ALA B . n B 1 118 TYR 118 117 117 TYR TYR B . n B 1 119 GLN 119 118 118 GLN GLN B . n B 1 120 THR 120 119 119 THR THR B . n B 1 121 GLY 121 120 120 GLY GLY B . n B 1 122 ALA 122 121 121 ALA ALA B . n B 1 123 ASP 123 122 122 ASP ASP B . n B 1 124 GLN 124 123 123 GLN GLN B . n B 1 125 ALA 125 124 124 ALA ALA B . n B 1 126 SER 126 125 125 SER SER B . n B 1 127 ILE 127 126 126 ILE ILE B . n B 1 128 THR 128 127 127 THR THR B . n B 1 129 ALA 129 128 128 ALA ALA B . n B 1 130 ARG 130 129 129 ARG ARG B . n B 1 131 ASN 131 130 130 ASN ASN B . n B 1 132 HIS 132 131 131 HIS HIS B . n B 1 133 ILE 133 132 132 ILE ILE B . n B 1 134 GLN 134 133 133 GLN GLN B . n B 1 135 LEU 135 134 134 LEU LEU B . n B 1 136 VAL 136 135 135 VAL VAL B . n B 1 137 LYS 137 136 136 LYS LYS B . n B 1 138 LEU 138 137 137 LEU LEU B . n B 1 139 GLN 139 138 138 GLN GLN B . n B 1 140 VAL 140 139 139 VAL VAL B . n B 1 141 GLU 141 140 140 GLU GLU B . n B 1 142 GLU 142 141 141 GLU GLU B . n B 1 143 VAL 143 142 142 VAL VAL B . n B 1 144 HIS 144 143 143 HIS HIS B . n B 1 145 GLN 145 144 144 GLN GLN B . n B 1 146 LEU 146 145 145 LEU LEU B . n B 1 147 SER 147 146 146 SER SER B . n B 1 148 ARG 148 147 147 ARG ARG B . n B 1 149 LYS 149 148 148 LYS LYS B . n B 1 150 ALA 150 149 149 ALA ALA B . n B 1 151 GLU 151 150 150 GLU GLU B . n B 1 152 THR 152 151 151 THR THR B . n B 1 153 LYS 153 152 152 LYS LYS B . n B 1 154 LEU 154 153 153 LEU LEU B . n B 1 155 ALA 155 154 154 ALA ALA B . n B 1 156 GLU 156 155 155 GLU GLU B . n B 1 157 ALA 157 156 156 ALA ALA B . n B 1 158 GLN 158 157 157 GLN GLN B . n B 1 159 ILE 159 158 158 ILE ILE B . n B 1 160 GLU 160 159 159 GLU GLU B . n B 1 161 GLU 161 160 160 GLU GLU B . n B 1 162 LEU 162 161 161 LEU LEU B . n B 1 163 ARG 163 162 162 ARG ARG B . n B 1 164 GLN 164 163 163 GLN GLN B . n B 1 165 LYS 165 164 164 LYS LYS B . n B 1 166 THR 166 165 165 THR THR B . n B 1 167 GLN 167 166 166 GLN GLN B . n B 1 168 GLU 168 167 167 GLU GLU B . n B 1 169 GLU 169 168 168 GLU GLU B . n B 1 170 GLY 170 169 169 GLY GLY B . n B 1 171 GLU 171 170 170 GLU GLU B . n B 1 172 GLU 172 171 171 GLU GLU B . n B 1 173 ARG 173 172 172 ARG ARG B . n B 1 174 ALA 174 173 173 ALA ALA B . n B 1 175 GLU 175 174 174 GLU GLU B . n B 1 176 SER 176 175 175 SER SER B . n B 1 177 GLU 177 176 176 GLU GLU B . n B 1 178 GLN 178 177 177 GLN GLN B . n B 1 179 GLU 179 178 178 GLU GLU B . n B 1 180 ALA 180 179 179 ALA ALA B . n B 1 181 TYR 181 180 180 TYR TYR B . n B 1 182 LEU 182 181 181 LEU LEU B . n B 1 183 ARG 183 182 182 ARG ARG B . n B 1 184 GLU 184 183 183 GLU GLU B . n B 1 185 ASP 185 184 184 ASP ASP B . n B 1 186 HIS 186 185 ? ? ? B . n B 1 187 HIS 187 186 ? ? ? B . n B 1 188 HIS 188 187 ? ? ? B . n B 1 189 HIS 189 188 ? ? ? B . n B 1 190 HIS 190 189 ? ? ? B . n B 1 191 HIS 191 190 ? ? ? B . n B 1 192 HIS 192 191 ? ? ? B . n B 1 193 HIS 193 192 ? ? ? B . n B 1 194 HIS 194 193 ? ? ? B . n C 2 1 UNK 1 51 51 UNK ALA C . n C 2 2 UNK 2 52 52 UNK ALA C . n C 2 3 UNK 3 53 53 UNK ALA C . n C 2 4 UNK 4 54 54 UNK ALA C . n C 2 5 UNK 5 55 55 UNK ALA C . n C 2 6 UNK 6 56 56 UNK ALA C . n C 2 7 UNK 7 57 57 UNK ALA C . n C 2 8 UNK 8 58 58 UNK ALA C . n C 2 9 UNK 9 59 59 UNK ALA C . n C 2 10 UNK 10 60 60 UNK ALA C . n C 2 11 UNK 11 61 61 UNK ALA C . n C 2 12 UNK 12 62 62 UNK ALA C . n C 2 13 UNK 13 63 63 UNK ALA C . n C 2 14 UNK 14 64 64 UNK ALA C . n C 2 15 UNK 15 65 65 UNK ALA C . n C 2 16 UNK 16 66 66 UNK ALA C . n C 2 17 UNK 17 67 67 UNK ALA C . n C 2 18 UNK 18 68 68 UNK ALA C . n C 2 19 UNK 19 69 69 UNK ALA C . n C 2 20 UNK 20 70 70 UNK ALA C . n C 2 21 UNK 21 71 71 UNK ALA C . n C 2 22 UNK 22 72 72 UNK ALA C . n C 2 23 UNK 23 73 73 UNK ALA C . n C 2 24 UNK 24 74 74 UNK ALA C . n C 2 25 UNK 25 75 75 UNK ALA C . n C 2 26 UNK 26 76 76 UNK ALA C . n C 2 27 UNK 27 77 77 UNK ALA C . n C 2 28 UNK 28 78 78 UNK ALA C . n C 2 29 UNK 29 79 79 UNK ALA C . n C 2 30 UNK 30 80 80 UNK ALA C . n C 2 31 UNK 31 81 81 UNK ALA C . n C 2 32 UNK 32 82 82 UNK ALA C . n C 2 33 UNK 33 83 83 UNK ALA C . n C 2 34 UNK 34 84 84 UNK ALA C . n C 2 35 UNK 35 85 85 UNK ALA C . n C 2 36 UNK 36 86 86 UNK ALA C . n C 2 37 UNK 37 87 87 UNK ALA C . n C 2 38 UNK 38 88 88 UNK ALA C . n C 2 39 UNK 39 89 89 UNK ALA C . n C 2 40 UNK 40 90 90 UNK ALA C . n C 2 41 UNK 41 91 91 UNK ALA C . n C 2 42 UNK 42 92 92 UNK ALA C . n C 2 43 UNK 43 93 93 UNK ALA C . n C 2 44 UNK 44 94 94 UNK ALA C . n C 2 45 UNK 45 95 95 UNK ALA C . n C 2 46 UNK 46 96 96 UNK ALA C . n C 2 47 UNK 47 97 97 UNK ALA C . n C 2 48 UNK 48 98 98 UNK ALA C . n C 2 49 UNK 49 99 99 UNK ALA C . n C 2 50 UNK 50 100 100 UNK ALA C . n C 2 51 UNK 51 101 101 UNK ALA C . n C 2 52 UNK 52 102 102 UNK ALA C . n C 2 53 UNK 53 103 103 UNK ALA C . n C 2 54 UNK 54 104 104 UNK ALA C . n C 2 55 UNK 55 105 105 UNK ALA C . n C 2 56 UNK 56 106 106 UNK ALA C . n C 2 57 UNK 57 107 107 UNK ALA C . n D 2 1 UNK 1 51 51 UNK ALA D . n D 2 2 UNK 2 52 52 UNK ALA D . n D 2 3 UNK 3 53 53 UNK ALA D . n D 2 4 UNK 4 54 54 UNK ALA D . n D 2 5 UNK 5 55 55 UNK ALA D . n D 2 6 UNK 6 56 56 UNK ALA D . n D 2 7 UNK 7 57 57 UNK ALA D . n D 2 8 UNK 8 58 58 UNK ALA D . n D 2 9 UNK 9 59 59 UNK ALA D . n D 2 10 UNK 10 60 60 UNK ALA D . n D 2 11 UNK 11 61 61 UNK ALA D . n D 2 12 UNK 12 62 62 UNK ALA D . n D 2 13 UNK 13 63 63 UNK ALA D . n D 2 14 UNK 14 64 64 UNK ALA D . n D 2 15 UNK 15 65 65 UNK ALA D . n D 2 16 UNK 16 66 66 UNK ALA D . n D 2 17 UNK 17 67 67 UNK ALA D . n D 2 18 UNK 18 68 68 UNK ALA D . n D 2 19 UNK 19 69 69 UNK ALA D . n D 2 20 UNK 20 70 70 UNK ALA D . n D 2 21 UNK 21 71 71 UNK ALA D . n D 2 22 UNK 22 72 72 UNK ALA D . n D 2 23 UNK 23 73 73 UNK ALA D . n D 2 24 UNK 24 74 74 UNK ALA D . n D 2 25 UNK 25 75 75 UNK ALA D . n D 2 26 UNK 26 76 76 UNK ALA D . n D 2 27 UNK 27 77 77 UNK ALA D . n D 2 28 UNK 28 78 78 UNK ALA D . n D 2 29 UNK 29 79 79 UNK ALA D . n D 2 30 UNK 30 80 80 UNK ALA D . n D 2 31 UNK 31 81 81 UNK ALA D . n D 2 32 UNK 32 82 82 UNK ALA D . n D 2 33 UNK 33 83 83 UNK ALA D . n D 2 34 UNK 34 84 84 UNK ALA D . n D 2 35 UNK 35 85 85 UNK ALA D . n D 2 36 UNK 36 86 86 UNK ALA D . n D 2 37 UNK 37 87 87 UNK ALA D . n D 2 38 UNK 38 88 88 UNK ALA D . n D 2 39 UNK 39 89 89 UNK ALA D . n D 2 40 UNK 40 90 90 UNK ALA D . n D 2 41 UNK 41 91 91 UNK ALA D . n D 2 42 UNK 42 92 92 UNK ALA D . n D 2 43 UNK 43 93 93 UNK ALA D . n D 2 44 UNK 44 94 94 UNK ALA D . n D 2 45 UNK 45 95 95 UNK ALA D . n D 2 46 UNK 46 96 96 UNK ALA D . n D 2 47 UNK 47 97 97 UNK ALA D . n D 2 48 UNK 48 98 98 UNK ALA D . n D 2 49 UNK 49 99 99 UNK ALA D . n D 2 50 UNK 50 100 100 UNK ALA D . n D 2 51 UNK 51 101 101 UNK ALA D . n D 2 52 UNK 52 102 102 UNK ALA D . n D 2 53 UNK 53 103 103 UNK ALA D . n D 2 54 UNK 54 104 104 UNK ALA D . n D 2 55 UNK 55 105 105 UNK ALA D . n D 2 56 UNK 56 106 106 UNK ALA D . n D 2 57 UNK 57 107 107 UNK ALA D . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email efischer@crystal.harvard.edu _pdbx_contact_author.name_first Eric _pdbx_contact_author.name_last Fischer _pdbx_contact_author.name_mi S. _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0001-7337-6306 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2023-02-15 2 'Structure model' 1 1 2023-02-22 3 'Structure model' 1 2 2023-03-29 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' citation 3 3 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.page_first' 2 2 'Structure model' '_citation.page_last' 3 2 'Structure model' '_citation.pdbx_database_id_PubMed' 4 2 'Structure model' '_citation.title' 5 3 'Structure model' '_citation.journal_volume' 6 3 'Structure model' '_citation.page_first' 7 3 'Structure model' '_citation.page_last' 8 3 'Structure model' '_citation.title' 9 3 'Structure model' '_citation_author.identifier_ORCID' # _software.citation_id ? _software.classification refinement _software.compiler_name ? _software.compiler_version ? _software.contact_author ? _software.contact_author_email ? _software.date ? _software.description ? _software.dependencies ? _software.hardware ? _software.language ? _software.location ? _software.mods ? _software.name PHENIX _software.os ? _software.os_version ? _software.type ? _software.version 1.20.1_4487: _software.pdbx_ordinal 1 # _em_3d_fitting.entry_id 8E2J _em_3d_fitting.id 1 _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_protocol OTHER _em_3d_fitting.ref_space REAL _em_3d_fitting.target_criteria ? _em_3d_fitting.method ? # _em_3d_reconstruction.entry_id 8E2J _em_3d_reconstruction.id 1 _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.details ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.num_particles 192025 _em_3d_reconstruction.resolution 3.44 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.symmetry_type POINT _em_3d_reconstruction.method ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.magnification_calibration ? # _em_buffer.id 1 _em_buffer.details ? _em_buffer.pH 7.4 _em_buffer.specimen_id 1 _em_buffer.name ? # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.details ? _em_entity_assembly.name 'Baculoviral IAP repeat-containing protein 6' _em_entity_assembly.source 'MULTIPLE SOURCES' _em_entity_assembly.type COMPLEX _em_entity_assembly.entity_id_list '1, 2' _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? # _em_image_scans.entry_id 8E2J _em_image_scans.id 1 _em_image_scans.dimension_height 4092 _em_image_scans.dimension_width 5760 _em_image_scans.frames_per_image 50 _em_image_scans.image_recording_id 1 _em_image_scans.sampling_size ? _em_image_scans.scanner_model ? _em_image_scans.used_frames_per_image 1-50 _em_image_scans.citation_id ? _em_image_scans.number_digital_images ? _em_image_scans.od_range ? _em_image_scans.quant_bit_size ? _em_image_scans.details ? # _em_imaging.id 1 _em_imaging.entry_id 8E2J _em_imaging.accelerating_voltage 300 _em_imaging.alignment_procedure 'COMA FREE' _em_imaging.c2_aperture_diameter 50 _em_imaging.calibrated_defocus_max ? _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_magnification ? _em_imaging.cryogen NITROGEN _em_imaging.details 'Data collection in counting mode, using multi-shot scheme (9 holes per stage position, 3 movies per hole)' _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs 2.7 _em_imaging.nominal_defocus_max 2200 _em_imaging.nominal_defocus_min 800 _em_imaging.nominal_magnification 105000 _em_imaging.recording_temperature_maximum ? _em_imaging.recording_temperature_minimum ? _em_imaging.residual_tilt ? _em_imaging.specimen_holder_model 'FEI TITAN KRIOS AUTOGRID HOLDER' _em_imaging.specimen_id 1 _em_imaging.citation_id ? _em_imaging.date ? _em_imaging.temperature ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.astigmatism ? _em_imaging.detector_distance ? _em_imaging.electron_beam_tilt_params ? _em_imaging.specimen_holder_type ? # _em_sample_support.id 1 _em_sample_support.specimen_id 1 _em_sample_support.details ? _em_sample_support.grid_material COPPER _em_sample_support.grid_mesh_size 300 _em_sample_support.grid_type 'Quantifoil R1.2/1.3' _em_sample_support.method ? _em_sample_support.film_material ? # _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.chamber_temperature 283.15 _em_vitrification.cryogen_name ETHANE _em_vitrification.details ? _em_vitrification.humidity 90 _em_vitrification.instrument 'LEICA EM GP' _em_vitrification.entry_id 8E2J _em_vitrification.citation_id ? _em_vitrification.method ? _em_vitrification.temp ? _em_vitrification.time_resolved_state ? # _em_experiment.entry_id 8E2J _em_experiment.id 1 _em_experiment.aggregation_state PARTICLE _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.entity_assembly_id 1 # _em_single_particle_entity.entry_id 8E2J _em_single_particle_entity.id 1 _em_single_particle_entity.image_processing_id 1 _em_single_particle_entity.point_symmetry C1 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A ARG 21 ? ? HG A SER 24 ? ? 1.46 2 1 O B GLN 61 ? ? HG B SER 64 ? ? 1.56 3 1 O B ASN 70 ? ? H B GLU 74 ? ? 1.59 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 70 ? ? -53.60 107.99 2 1 GLU A 73 ? ? -98.92 -62.14 3 1 GLU A 183 ? ? 62.38 -29.14 4 1 ASN B 70 ? ? -151.85 74.32 5 1 GLU B 183 ? ? 62.65 -29.22 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 0 ? A MET 1 2 1 Y 1 A ALA 1 ? A ALA 2 3 1 Y 1 A VAL 2 ? A VAL 3 4 1 Y 1 A PRO 3 ? A PRO 4 5 1 Y 1 A ILE 4 ? A ILE 5 6 1 Y 1 A ALA 5 ? A ALA 6 7 1 Y 1 A GLN 6 ? A GLN 7 8 1 Y 1 A LYS 7 ? A LYS 8 9 1 Y 1 A SER 8 ? A SER 9 10 1 Y 1 A GLU 9 ? A GLU 10 11 1 Y 1 A PRO 10 ? A PRO 11 12 1 Y 1 A HIS 11 ? A HIS 12 13 1 Y 1 A HIS 185 ? A HIS 186 14 1 Y 1 A HIS 186 ? A HIS 187 15 1 Y 1 A HIS 187 ? A HIS 188 16 1 Y 1 A HIS 188 ? A HIS 189 17 1 Y 1 A HIS 189 ? A HIS 190 18 1 Y 1 A HIS 190 ? A HIS 191 19 1 Y 1 A HIS 191 ? A HIS 192 20 1 Y 1 A HIS 192 ? A HIS 193 21 1 Y 1 A HIS 193 ? A HIS 194 22 1 Y 1 B MET 0 ? B MET 1 23 1 Y 1 B ALA 1 ? B ALA 2 24 1 Y 1 B VAL 2 ? B VAL 3 25 1 Y 1 B PRO 3 ? B PRO 4 26 1 Y 1 B ILE 4 ? B ILE 5 27 1 Y 1 B ALA 5 ? B ALA 6 28 1 Y 1 B GLN 6 ? B GLN 7 29 1 Y 1 B LYS 7 ? B LYS 8 30 1 Y 1 B SER 8 ? B SER 9 31 1 Y 1 B GLU 9 ? B GLU 10 32 1 Y 1 B PRO 10 ? B PRO 11 33 1 Y 1 B HIS 11 ? B HIS 12 34 1 Y 1 B HIS 185 ? B HIS 186 35 1 Y 1 B HIS 186 ? B HIS 187 36 1 Y 1 B HIS 187 ? B HIS 188 37 1 Y 1 B HIS 188 ? B HIS 189 38 1 Y 1 B HIS 189 ? B HIS 190 39 1 Y 1 B HIS 190 ? B HIS 191 40 1 Y 1 B HIS 191 ? B HIS 192 41 1 Y 1 B HIS 192 ? B HIS 193 42 1 Y 1 B HIS 193 ? B HIS 194 # loop_ _em_buffer_component.buffer_id _em_buffer_component.id _em_buffer_component.concentration _em_buffer_component.concentration_units _em_buffer_component.formula _em_buffer_component.name 1 1 30 mM C8H18N2O4S HEPES 1 2 150 mM NaCl 'Sodium chloride' 1 3 3 mM C9H15O6P TCEP # _em_ctf_correction.id 1 _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' _em_ctf_correction.details ? # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.units MEGADALTONS _em_entity_assembly_molwt.value 1.111 # _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.ncbi_tax_id 9606 _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organism 'Homo sapiens' _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? # _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.ncbi_tax_id 9606 _em_entity_assembly_recombinant.organism 'Homo sapiens' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain Expi293 # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.avg_electron_dose_per_image 56.379 _em_image_recording.average_exposure_time 1.365 _em_image_recording.details ? _em_image_recording.detector_mode COUNTING _em_image_recording.film_or_detector_model 'GATAN K3 BIOQUANTUM (6k x 4k)' _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged 1 _em_image_recording.num_real_images 14574 _em_image_recording.avg_electron_dose_per_subtomogram ? # _em_imaging_optics.id 1 _em_imaging_optics.imaging_id 1 _em_imaging_optics.chr_aberration_corrector ? _em_imaging_optics.energyfilter_lower ? _em_imaging_optics.energyfilter_name 'GIF Bioquantum' _em_imaging_optics.energyfilter_upper ? _em_imaging_optics.energyfilter_slit_width 20 _em_imaging_optics.phase_plate ? _em_imaging_optics.sph_aberration_corrector ? _em_imaging_optics.details ? # _em_particle_selection.id 1 _em_particle_selection.image_processing_id 1 _em_particle_selection.details ? _em_particle_selection.method ? _em_particle_selection.num_particles_selected 3192460 _em_particle_selection.reference_model ? # loop_ _em_software.id _em_software.category _em_software.details _em_software.name _em_software.version _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id 1 'PARTICLE SELECTION' ? Topaz ? 1 ? ? 2 'IMAGE ACQUISITION' ? SerialEM 3.8.5 ? ? 1 3 MASKING ? ? ? ? ? ? 4 'CTF CORRECTION' ? cryoSPARC ? 1 ? ? 5 'LAYERLINE INDEXING' ? ? ? ? ? ? 6 'DIFFRACTION INDEXING' ? ? ? ? ? ? 7 'MODEL FITTING' ? Coot ? ? 1 ? 8 OTHER ? ? ? ? ? ? 9 'MODEL REFINEMENT' ? Coot ? ? 1 ? 10 'MODEL REFINEMENT' ? PHENIX ? ? 1 ? 11 'MODEL REFINEMENT' ? ISOLDE ? ? 1 ? 12 'MODEL REFINEMENT' ? 'UCSF ChimeraX' ? ? 1 ? 13 'MODEL REFINEMENT' ? 'UCSF Chimera' ? ? 1 ? 14 'INITIAL EULER ASSIGNMENT' ? cryoSPARC ? 1 ? ? 15 'FINAL EULER ASSIGNMENT' ? cryoSPARC ? 1 ? ? 16 CLASSIFICATION ? cryoSPARC ? 1 ? ? 17 RECONSTRUCTION ? cryoSPARC ? 1 ? ? # _em_specimen.id 1 _em_specimen.experiment_id 1 _em_specimen.concentration 1.4 _em_specimen.details 'added CHAPSO to 0.5 mM' _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Cancer Institute (NIH/NCI)' 'United States' CA066996 1 'The Mark Foundation' 'United States' 19-001-ELA 2 # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details ? #