HEADER DNA BINDING PROTEIN 15-AUG-22 8E2R TITLE CRYSTAL STRUCTURE OF TADAC-1.14 COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRNA-SPECIFIC ADENOSINE DEAMINASE 1.14; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.5.4.33; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: TADA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS DEAMINASE, TADAC, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR P.R.FELICIANO,S.J.LEE,G.CIARAMELLA REVDAT 4 25-OCT-23 8E2R 1 REMARK REVDAT 3 31-MAY-23 8E2R 1 JRNL REVDAT 2 08-FEB-23 8E2R 1 JRNL REVDAT 1 11-JAN-23 8E2R 0 JRNL AUTH D.K.LAM,P.R.FELICIANO,A.ARIF,T.BOHNUUD,T.P.FERNANDEZ, JRNL AUTH 2 J.M.GEHRKE,P.GRAYSON,K.D.LEE,M.A.ORTEGA,C.SAWYER, JRNL AUTH 3 N.D.SCHWAEGERLE,L.PERARO,L.YOUNG,S.J.LEE,G.CIARAMELLA, JRNL AUTH 4 N.M.GAUDELLI JRNL TITL IMPROVED CYTOSINE BASE EDITORS GENERATED FROM TADA VARIANTS. JRNL REF NAT.BIOTECHNOL. V. 41 686 2023 JRNL REFN ISSN 1087-0156 JRNL PMID 36624149 JRNL DOI 10.1038/S41587-022-01611-9 REMARK 2 REMARK 2 RESOLUTION. 2.22 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.22 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 55.21 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 23234 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.218 REMARK 3 R VALUE (WORKING SET) : 0.216 REMARK 3 FREE R VALUE : 0.251 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 1165 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 55.2100 - 4.4400 1.00 2946 160 0.2096 0.2633 REMARK 3 2 4.4400 - 3.5200 1.00 2775 159 0.1959 0.2285 REMARK 3 3 3.5200 - 3.0800 1.00 2758 142 0.2183 0.2163 REMARK 3 4 3.0800 - 2.8000 1.00 2751 142 0.2218 0.2635 REMARK 3 5 2.8000 - 2.6000 1.00 2716 147 0.2534 0.2826 REMARK 3 6 2.6000 - 2.4400 1.00 2707 133 0.2377 0.2924 REMARK 3 7 2.4400 - 2.3200 1.00 2733 131 0.2539 0.2683 REMARK 3 8 2.3200 - 2.2200 1.00 2683 151 0.3021 0.3114 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.280 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.410 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 64.34 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 6 THROUGH 25 OR REMARK 3 (RESID 26 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 27 REMARK 3 THROUGH 38 OR (RESID 39 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 40 THROUGH 46 OR (RESID 47 REMARK 3 THROUGH 49 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 50 REMARK 3 THROUGH 108 OR RESID 115 OR (RESID 116 REMARK 3 AND (NAME N OR NAME CA OR NAME C OR NAME REMARK 3 O OR NAME CB )) OR RESID 117 OR (RESID REMARK 3 118 AND (NAME N OR NAME CA OR NAME C OR REMARK 3 NAME O OR NAME CB )) OR RESID 119 THROUGH REMARK 3 121 OR (RESID 122 AND (NAME N OR NAME CA REMARK 3 OR NAME C OR NAME O OR NAME CB )) OR REMARK 3 RESID 123 THROUGH 125 OR (RESID 126 REMARK 3 THROUGH 127 AND (NAME N OR NAME CA OR REMARK 3 NAME C OR NAME O OR NAME CB )) OR RESID REMARK 3 128 OR (RESID 129 AND (NAME N OR NAME CA REMARK 3 OR NAME C OR NAME O OR NAME CB )) OR REMARK 3 RESID 130 THROUGH 150)) REMARK 3 SELECTION : (CHAIN B AND (RESID 6 THROUGH 12 OR REMARK 3 (RESID 13 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 14 REMARK 3 THROUGH 48 OR (RESID 49 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 50 THROUGH 139 OR (RESID 140 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB OR NAME CG )) OR RESID 141 REMARK 3 THROUGH 150)) REMARK 3 ATOM PAIRS NUMBER : 836 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8E2R COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-AUG-22. REMARK 100 THE DEPOSITION ID IS D_1000267716. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-MAY-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALBA REMARK 200 BEAMLINE : XALOC REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97926 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23294 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.220 REMARK 200 RESOLUTION RANGE LOW (A) : 56.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 14.20 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.22 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 8E2P REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.99 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULFATE, HEPES PH 7.5, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 56.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 44.87000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 44.87000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 28.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 44.87000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 44.87000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 84.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 44.87000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 44.87000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 28.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 44.87000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 44.87000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 84.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 56.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2820 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12720 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -101.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 HIS A 2 REMARK 465 GLU A 3 REMARK 465 VAL A 4 REMARK 465 GLU A 5 REMARK 465 ALA A 114 REMARK 465 MET A 151 REMARK 465 PRO A 152 REMARK 465 ARG A 153 REMARK 465 ARG A 154 REMARK 465 VAL A 155 REMARK 465 PHE A 156 REMARK 465 ASN A 157 REMARK 465 ALA A 158 REMARK 465 GLN A 159 REMARK 465 LYS A 160 REMARK 465 LYS A 161 REMARK 465 ALA A 162 REMARK 465 GLN A 163 REMARK 465 SER A 164 REMARK 465 SER A 165 REMARK 465 THR A 166 REMARK 465 ASP A 167 REMARK 465 MET B 1 REMARK 465 HIS B 2 REMARK 465 ALA B 109 REMARK 465 LYS B 110 REMARK 465 THR B 111 REMARK 465 HIS B 112 REMARK 465 ALA B 113 REMARK 465 ALA B 114 REMARK 465 PHE B 156 REMARK 465 ASN B 157 REMARK 465 ALA B 158 REMARK 465 GLN B 159 REMARK 465 LYS B 160 REMARK 465 LYS B 161 REMARK 465 ALA B 162 REMARK 465 GLN B 163 REMARK 465 SER B 164 REMARK 465 SER B 165 REMARK 465 THR B 166 REMARK 465 ASP B 167 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 13 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 26 CD NE CZ NH1 NH2 REMARK 470 ARG A 39 CD NE CZ NH1 NH2 REMARK 470 LYS A 49 CG CD CE NZ REMARK 470 LYS A 110 CG CD CE NZ REMARK 470 ARG A 129 CD NE CZ NH1 NH2 REMARK 470 GLU A 140 CD OE1 OE2 REMARK 470 ARG A 147 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 150 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 3 CG CD OE1 OE2 REMARK 470 GLU B 5 CG CD OE1 OE2 REMARK 470 ARG B 26 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 39 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 47 CG CD NE CZ NH1 NH2 REMARK 470 SER B 116 OG REMARK 470 MET B 118 CG SD CE REMARK 470 HIS B 122 CG ND1 CD2 CE1 NE2 REMARK 470 MET B 126 CG SD CE REMARK 470 ASN B 127 CG OD1 ND2 REMARK 470 ARG B 129 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 147 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 150 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 153 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 154 CG CD NE CZ NH1 NH2 REMARK 470 VAL B 155 CG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 47 21.44 -144.19 REMARK 500 ALA A 56 49.85 -77.48 REMARK 500 LEU A 75 63.91 -117.74 REMARK 500 LYS A 110 -74.40 -66.28 REMARK 500 ARG B 47 22.17 -142.96 REMARK 500 LEU B 75 65.13 -116.88 REMARK 500 MET B 126 71.43 -115.71 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 57 ND1 REMARK 620 2 CYS A 87 SG 106.5 REMARK 620 3 CYS A 90 SG 110.0 116.6 REMARK 620 4 HOH A 310 O 99.7 112.0 110.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 202 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 57 ND1 REMARK 620 2 CYS B 87 SG 103.9 REMARK 620 3 CYS B 90 SG 116.0 113.7 REMARK 620 4 HOH B 306 O 104.1 100.3 116.8 REMARK 620 N 1 2 3 DBREF 8E2R A 1 167 UNP W8T8U5 W8T8U5_ECOLX 1 167 DBREF 8E2R B 1 167 UNP W8T8U5 W8T8U5_ECOLX 1 167 SEQADV 8E2R HIS A 2 UNP W8T8U5 SER 2 CONFLICT SEQADV 8E2R ARG A 23 UNP W8T8U5 TRP 23 CONFLICT SEQADV 8E2R LEU A 36 UNP W8T8U5 HIS 36 CONFLICT SEQADV 8E2R ALA A 48 UNP W8T8U5 PRO 48 CONFLICT SEQADV 8E2R LYS A 49 UNP W8T8U5 ILE 49 CONFLICT SEQADV 8E2R LEU A 51 UNP W8T8U5 ARG 51 CONFLICT SEQADV 8E2R SER A 82 UNP W8T8U5 VAL 82 CONFLICT SEQADV 8E2R PHE A 84 UNP W8T8U5 LEU 84 CONFLICT SEQADV 8E2R VAL A 106 UNP W8T8U5 ALA 106 CONFLICT SEQADV 8E2R ASN A 108 UNP W8T8U5 ASP 108 CONFLICT SEQADV 8E2R HIS A 112 UNP W8T8U5 GLY 112 CONFLICT SEQADV 8E2R CYS A 146 UNP W8T8U5 SER 146 CONFLICT SEQADV 8E2R ARG A 147 UNP W8T8U5 ASP 147 CONFLICT SEQADV 8E2R PRO A 152 UNP W8T8U5 ARG 152 CONFLICT SEQADV 8E2R ARG A 154 UNP W8T8U5 GLN 154 CONFLICT SEQADV 8E2R VAL A 155 UNP W8T8U5 GLU 155 CONFLICT SEQADV 8E2R PHE A 156 UNP W8T8U5 ILE 156 CONFLICT SEQADV 8E2R ASN A 157 UNP W8T8U5 LYS 157 CONFLICT SEQADV 8E2R HIS B 2 UNP W8T8U5 SER 2 CONFLICT SEQADV 8E2R ARG B 23 UNP W8T8U5 TRP 23 CONFLICT SEQADV 8E2R LEU B 36 UNP W8T8U5 HIS 36 CONFLICT SEQADV 8E2R ALA B 48 UNP W8T8U5 PRO 48 CONFLICT SEQADV 8E2R LYS B 49 UNP W8T8U5 ILE 49 CONFLICT SEQADV 8E2R LEU B 51 UNP W8T8U5 ARG 51 CONFLICT SEQADV 8E2R SER B 82 UNP W8T8U5 VAL 82 CONFLICT SEQADV 8E2R PHE B 84 UNP W8T8U5 LEU 84 CONFLICT SEQADV 8E2R VAL B 106 UNP W8T8U5 ALA 106 CONFLICT SEQADV 8E2R ASN B 108 UNP W8T8U5 ASP 108 CONFLICT SEQADV 8E2R HIS B 112 UNP W8T8U5 GLY 112 CONFLICT SEQADV 8E2R CYS B 146 UNP W8T8U5 SER 146 CONFLICT SEQADV 8E2R ARG B 147 UNP W8T8U5 ASP 147 CONFLICT SEQADV 8E2R PRO B 152 UNP W8T8U5 ARG 152 CONFLICT SEQADV 8E2R ARG B 154 UNP W8T8U5 GLN 154 CONFLICT SEQADV 8E2R VAL B 155 UNP W8T8U5 GLU 155 CONFLICT SEQADV 8E2R PHE B 156 UNP W8T8U5 ILE 156 CONFLICT SEQADV 8E2R ASN B 157 UNP W8T8U5 LYS 157 CONFLICT SEQRES 1 A 167 MET HIS GLU VAL GLU PHE SER HIS GLU TYR TRP MET ARG SEQRES 2 A 167 HIS ALA LEU THR LEU ALA LYS ARG ALA ARG ASP GLU ARG SEQRES 3 A 167 GLU VAL PRO VAL GLY ALA VAL LEU VAL LEU ASN ASN ARG SEQRES 4 A 167 VAL ILE GLY GLU GLY TRP ASN ARG ALA LYS GLY LEU HIS SEQRES 5 A 167 ASP PRO THR ALA HIS ALA GLU ILE MET ALA LEU ARG GLN SEQRES 6 A 167 GLY GLY LEU VAL MET GLN ASN TYR ARG LEU ILE ASP ALA SEQRES 7 A 167 THR LEU TYR SER THR PHE GLU PRO CYS VAL MET CYS ALA SEQRES 8 A 167 GLY ALA MET ILE HIS SER ARG ILE GLY ARG VAL VAL PHE SEQRES 9 A 167 GLY VAL ARG ASN ALA LYS THR HIS ALA ALA GLY SER LEU SEQRES 10 A 167 MET ASP VAL LEU HIS HIS PRO GLY MET ASN HIS ARG VAL SEQRES 11 A 167 GLU ILE THR GLU GLY ILE LEU ALA ASP GLU CYS ALA ALA SEQRES 12 A 167 LEU LEU CYS ARG PHE PHE ARG MET PRO ARG ARG VAL PHE SEQRES 13 A 167 ASN ALA GLN LYS LYS ALA GLN SER SER THR ASP SEQRES 1 B 167 MET HIS GLU VAL GLU PHE SER HIS GLU TYR TRP MET ARG SEQRES 2 B 167 HIS ALA LEU THR LEU ALA LYS ARG ALA ARG ASP GLU ARG SEQRES 3 B 167 GLU VAL PRO VAL GLY ALA VAL LEU VAL LEU ASN ASN ARG SEQRES 4 B 167 VAL ILE GLY GLU GLY TRP ASN ARG ALA LYS GLY LEU HIS SEQRES 5 B 167 ASP PRO THR ALA HIS ALA GLU ILE MET ALA LEU ARG GLN SEQRES 6 B 167 GLY GLY LEU VAL MET GLN ASN TYR ARG LEU ILE ASP ALA SEQRES 7 B 167 THR LEU TYR SER THR PHE GLU PRO CYS VAL MET CYS ALA SEQRES 8 B 167 GLY ALA MET ILE HIS SER ARG ILE GLY ARG VAL VAL PHE SEQRES 9 B 167 GLY VAL ARG ASN ALA LYS THR HIS ALA ALA GLY SER LEU SEQRES 10 B 167 MET ASP VAL LEU HIS HIS PRO GLY MET ASN HIS ARG VAL SEQRES 11 B 167 GLU ILE THR GLU GLY ILE LEU ALA ASP GLU CYS ALA ALA SEQRES 12 B 167 LEU LEU CYS ARG PHE PHE ARG MET PRO ARG ARG VAL PHE SEQRES 13 B 167 ASN ALA GLN LYS LYS ALA GLN SER SER THR ASP HET ZN A 201 1 HET GOL B 201 6 HET ZN B 202 1 HETNAM ZN ZINC ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 ZN 2(ZN 2+) FORMUL 4 GOL C3 H8 O3 FORMUL 6 HOH *38(H2 O) HELIX 1 AA1 SER A 7 GLU A 25 1 19 HELIX 2 AA2 HIS A 57 GLN A 71 1 15 HELIX 3 AA3 CYS A 87 ARG A 98 1 12 HELIX 4 AA4 LEU A 117 HIS A 122 1 6 HELIX 5 AA5 LEU A 137 PHE A 149 1 13 HELIX 6 AA6 SER B 7 GLU B 25 1 19 HELIX 7 AA7 ARG B 47 HIS B 52 1 6 HELIX 8 AA8 HIS B 57 GLN B 71 1 15 HELIX 9 AA9 CYS B 87 ARG B 98 1 12 HELIX 10 AB1 LEU B 117 LEU B 121 5 5 HELIX 11 AB2 LEU B 137 ARG B 150 1 14 SHEET 1 AA1 5 ARG A 39 TRP A 45 0 SHEET 2 AA1 5 GLY A 31 LEU A 36 -1 N LEU A 34 O GLY A 42 SHEET 3 AA1 5 THR A 79 PHE A 84 -1 O THR A 79 N VAL A 35 SHEET 4 AA1 5 ARG A 101 VAL A 106 1 O VAL A 103 N LEU A 80 SHEET 5 AA1 5 GLU A 131 GLU A 134 1 O GLU A 131 N VAL A 102 SHEET 1 AA2 5 ARG B 39 TRP B 45 0 SHEET 2 AA2 5 GLY B 31 LEU B 36 -1 N LEU B 34 O GLY B 42 SHEET 3 AA2 5 THR B 79 PHE B 84 -1 O THR B 79 N VAL B 35 SHEET 4 AA2 5 ARG B 101 VAL B 106 1 O VAL B 103 N LEU B 80 SHEET 5 AA2 5 GLU B 131 GLU B 134 1 O GLU B 131 N VAL B 102 LINK ND1 HIS A 57 ZN ZN A 201 1555 1555 2.01 LINK SG CYS A 87 ZN ZN A 201 1555 1555 2.18 LINK SG CYS A 90 ZN ZN A 201 1555 1555 2.25 LINK ZN ZN A 201 O HOH A 310 1555 1555 2.14 LINK ND1 HIS B 57 ZN ZN B 202 1555 1555 1.99 LINK SG CYS B 87 ZN ZN B 202 1555 1555 2.34 LINK SG CYS B 90 ZN ZN B 202 1555 1555 2.28 LINK ZN ZN B 202 O HOH B 306 1555 1555 2.01 CRYST1 89.740 89.740 112.000 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011143 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011143 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008929 0.00000