HEADER METAL TRANSPORT 22-AUG-22 8E5S TITLE X-RAY STRUCTURE OF THE DEINOCOCCUS RADIODURANS NRAMP/MNTH DIVALENT TITLE 2 TRANSITION METAL TRANSPORTER WT IN AN OCCLUDED STATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: DIVALENT METAL CATION TRANSPORTER MNTH; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DEINOCOCCUS RADIODURANS; SOURCE 3 ORGANISM_TAXID: 1299; SOURCE 4 GENE: MNTH, DR_1709; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS MEMBRANE PROTEIN, DIVALENT TRANSITION METAL IMPORTER, LEUT FOLD, KEYWDS 2 NRAMP FAMILY, METAL TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR S.RAY,R.GAUDET REVDAT 3 05-MAR-25 8E5S 1 REMARK REVDAT 2 25-OCT-23 8E5S 1 REMARK REVDAT 1 03-MAY-23 8E5S 0 JRNL AUTH S.RAY,S.P.BERRY,E.A.WILSON,C.H.ZHANG,M.SHEKHAR,A.SINGHAROY, JRNL AUTH 2 R.GAUDET JRNL TITL HIGH-RESOLUTION STRUCTURES WITH BOUND MN 2+ AND CD 2+ MAP JRNL TITL 2 THE METAL IMPORT PATHWAY IN AN NRAMP TRANSPORTER. JRNL REF ELIFE V. 12 2023 JRNL REFN ESSN 2050-084X JRNL PMID 37039477 JRNL DOI 10.7554/ELIFE.84006 REMARK 2 REMARK 2 RESOLUTION. 2.38 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.38 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.06 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.7 REMARK 3 NUMBER OF REFLECTIONS : 15624 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.211 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.249 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.020 REMARK 3 FREE R VALUE TEST SET COUNT : 1565 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.0600 - 5.2900 0.87 1304 146 0.1904 0.2260 REMARK 3 2 5.2900 - 4.2000 0.89 1263 141 0.1743 0.1939 REMARK 3 3 4.2000 - 3.6700 0.91 1274 140 0.1739 0.2250 REMARK 3 4 3.6700 - 3.3300 0.91 1290 144 0.1909 0.2544 REMARK 3 5 3.3300 - 3.1000 0.92 1257 139 0.2350 0.2295 REMARK 3 6 3.1000 - 2.9100 0.92 1281 143 0.2394 0.3059 REMARK 3 7 2.9100 - 2.7700 0.92 1266 141 0.2404 0.3064 REMARK 3 8 2.7700 - 2.6500 0.94 1270 141 0.2477 0.2863 REMARK 3 9 2.6500 - 2.5400 0.94 1280 143 0.2515 0.3183 REMARK 3 10 2.5400 - 2.4600 0.94 1290 143 0.2613 0.3376 REMARK 3 11 2.4600 - 2.3800 0.93 1284 144 0.2639 0.3126 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.270 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.700 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 36.73 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 48.09 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 45 THROUGH 74 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.9745 -22.3200 30.3131 REMARK 3 T TENSOR REMARK 3 T11: 0.5583 T22: 0.2323 REMARK 3 T33: 0.2054 T12: 0.0805 REMARK 3 T13: 0.0103 T23: -0.0233 REMARK 3 L TENSOR REMARK 3 L11: 4.9051 L22: 1.4217 REMARK 3 L33: 2.4090 L12: 0.3801 REMARK 3 L13: -1.0430 L23: -1.4439 REMARK 3 S TENSOR REMARK 3 S11: -0.2275 S12: 0.2789 S13: -0.5043 REMARK 3 S21: -0.4451 S22: -0.2759 S23: 0.2705 REMARK 3 S31: 0.1970 S32: 0.1278 S33: 0.1406 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 75 THROUGH 146 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.8842 -13.4167 16.2637 REMARK 3 T TENSOR REMARK 3 T11: 0.4338 T22: 0.2144 REMARK 3 T33: 0.1655 T12: 0.0063 REMARK 3 T13: -0.0171 T23: 0.0220 REMARK 3 L TENSOR REMARK 3 L11: 0.5740 L22: 0.5535 REMARK 3 L33: 1.3989 L12: -0.1850 REMARK 3 L13: 0.0789 L23: -0.8989 REMARK 3 S TENSOR REMARK 3 S11: -0.0532 S12: -0.0061 S13: 0.0812 REMARK 3 S21: -0.1069 S22: 0.0015 S23: -0.1078 REMARK 3 S31: -0.0489 S32: 0.1120 S33: 0.0630 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 147 THROUGH 196 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.8678 -26.2446 25.5401 REMARK 3 T TENSOR REMARK 3 T11: 0.5070 T22: 0.2848 REMARK 3 T33: 0.3278 T12: 0.0425 REMARK 3 T13: 0.0378 T23: 0.0159 REMARK 3 L TENSOR REMARK 3 L11: 2.3205 L22: 2.8143 REMARK 3 L33: 1.0750 L12: 1.2475 REMARK 3 L13: -0.2264 L23: -0.5421 REMARK 3 S TENSOR REMARK 3 S11: -0.3334 S12: 0.1820 S13: -0.2314 REMARK 3 S21: -0.5410 S22: 0.1004 S23: -0.4277 REMARK 3 S31: 0.2047 S32: 0.1346 S33: 0.2298 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 197 THROUGH 249 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.2037 -20.6912 24.2557 REMARK 3 T TENSOR REMARK 3 T11: 0.4531 T22: 0.2741 REMARK 3 T33: 0.1888 T12: 0.0275 REMARK 3 T13: 0.0234 T23: -0.0016 REMARK 3 L TENSOR REMARK 3 L11: 1.2314 L22: 0.9495 REMARK 3 L33: 2.0460 L12: 0.2573 REMARK 3 L13: 0.1631 L23: -0.9149 REMARK 3 S TENSOR REMARK 3 S11: -0.1323 S12: 0.0390 S13: 0.0429 REMARK 3 S21: -0.1382 S22: -0.0680 S23: 0.0661 REMARK 3 S31: 0.0490 S32: -0.0183 S33: 0.0560 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 250 THROUGH 304 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.5188 -27.3420 27.8147 REMARK 3 T TENSOR REMARK 3 T11: 0.5576 T22: 0.2491 REMARK 3 T33: 0.2562 T12: 0.0337 REMARK 3 T13: 0.0360 T23: 0.0511 REMARK 3 L TENSOR REMARK 3 L11: 0.5907 L22: 1.1243 REMARK 3 L33: 1.3758 L12: -0.4040 REMARK 3 L13: 0.0514 L23: -0.8325 REMARK 3 S TENSOR REMARK 3 S11: 0.0645 S12: -0.0252 S13: -0.2188 REMARK 3 S21: -0.1681 S22: 0.1638 S23: -0.0644 REMARK 3 S31: 0.2872 S32: 0.0403 S33: 0.0984 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 305 THROUGH 397 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.3591 -14.2939 22.3085 REMARK 3 T TENSOR REMARK 3 T11: 0.4626 T22: 0.2100 REMARK 3 T33: 0.1993 T12: 0.0021 REMARK 3 T13: 0.0052 T23: 0.0096 REMARK 3 L TENSOR REMARK 3 L11: 0.8668 L22: 0.6739 REMARK 3 L33: 1.0977 L12: -0.0615 REMARK 3 L13: -0.1665 L23: -0.7069 REMARK 3 S TENSOR REMARK 3 S11: -0.0773 S12: 0.0038 S13: -0.0856 REMARK 3 S21: 0.0038 S22: -0.0717 S23: -0.1573 REMARK 3 S31: -0.0069 S32: 0.3164 S33: 0.1507 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 398 THROUGH 436 ) REMARK 3 ORIGIN FOR THE GROUP (A): -29.6192 -11.5037 17.3430 REMARK 3 T TENSOR REMARK 3 T11: 0.3868 T22: 0.3134 REMARK 3 T33: 0.1757 T12: 0.0701 REMARK 3 T13: -0.0017 T23: 0.0811 REMARK 3 L TENSOR REMARK 3 L11: 1.7349 L22: 1.4146 REMARK 3 L33: 3.4814 L12: -0.1470 REMARK 3 L13: -0.0932 L23: -0.2130 REMARK 3 S TENSOR REMARK 3 S11: 0.0995 S12: -0.2046 S13: 0.1754 REMARK 3 S21: -0.0438 S22: 0.1994 S23: 0.1415 REMARK 3 S31: 0.0633 S32: -0.7545 S33: -0.0106 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8E5S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-AUG-22. REMARK 100 THE DEPOSITION ID IS D_1000267855. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-NOV-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.984 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS 1.20.1_4487 REMARK 200 DATA SCALING SOFTWARE : AIMLESS 1.20.1_4487 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15678 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.380 REMARK 200 RESOLUTION RANGE LOW (A) : 41.060 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.4 REMARK 200 DATA REDUNDANCY : 4.500 REMARK 200 R MERGE (I) : 0.19200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.38 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.47 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.40 REMARK 200 R MERGE FOR SHELL (I) : 1.23800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 6C3I REMARK 200 REMARK 200 REMARK: 30 MICRON IN SIZE AND ISOMORPHOUS REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 28% PEG400, 0.1 M MES, PH 6.7, 50 MM REMARK 280 SUCCINIC ACID, PH 6.0, 5 MM SPERMIDINE, PH 7.0, LIPIDIC CUBIC REMARK 280 PHASE, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 2 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 X,-Y,-Z REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 -X,-Y+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.42500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 49.17100 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 35.42500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 49.17100 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1210 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18260 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 644 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 23 REMARK 465 HIS A 24 REMARK 465 HIS A 25 REMARK 465 HIS A 26 REMARK 465 HIS A 27 REMARK 465 HIS A 28 REMARK 465 HIS A 29 REMARK 465 HIS A 30 REMARK 465 HIS A 31 REMARK 465 ALA A 32 REMARK 465 GLY A 33 REMARK 465 PRO A 34 REMARK 465 ARG A 35 REMARK 465 GLY A 36 REMARK 465 VAL A 37 REMARK 465 ARG A 38 REMARK 465 ARG A 39 REMARK 465 ILE A 40 REMARK 465 LEU A 41 REMARK 465 PRO A 42 REMARK 465 PHE A 43 REMARK 465 LEU A 44 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 168 CG CD OE1 NE2 REMARK 470 LYS A 169 CG CD CE NZ REMARK 470 ARG A 170 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 173 CG CD NE CZ NH1 NH2 REMARK 470 TYR A 428 CG CD1 CD2 CE1 CE2 CZ OH REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 198 71.09 50.27 REMARK 500 ASP A 200 106.33 -59.62 REMARK 500 PRO A 210 108.46 -57.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 OLC A 505 REMARK 610 OLC A 506 REMARK 610 OLC A 508 REMARK 610 OLC A 510 REMARK 610 OLC A 512 REMARK 610 OLC A 513 REMARK 610 OLC A 514 REMARK 610 OLC A 515 REMARK 610 OLC A 516 REMARK 610 OLC A 517 REMARK 610 OLC A 518 REMARK 610 OLC A 519 REMARK 610 OLC A 520 REMARK 610 OLC A 521 REMARK 610 OLC A 522 REMARK 610 OLC A 523 REMARK 610 OLC A 524 REMARK 610 OLC A 525 REMARK 610 OLC A 526 REMARK 610 PEG A 527 REMARK 610 PEG A 528 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 501 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 296 OD1 REMARK 620 2 ASP A 296 OD2 48.3 REMARK 620 3 ASP A 369 OD1 120.8 83.8 REMARK 620 4 ASP A 369 OD2 123.3 75.2 43.4 REMARK 620 5 SER A 371 OG 70.1 89.5 78.4 120.3 REMARK 620 6 HOH A 637 O 93.2 89.1 122.8 79.9 158.5 REMARK 620 N 1 2 3 4 5 DBREF 8E5S A 32 436 UNP Q9RTP8 MNTH_DEIRA 32 436 SEQADV 8E5S MET A 23 UNP Q9RTP8 EXPRESSION TAG SEQADV 8E5S HIS A 24 UNP Q9RTP8 EXPRESSION TAG SEQADV 8E5S HIS A 25 UNP Q9RTP8 EXPRESSION TAG SEQADV 8E5S HIS A 26 UNP Q9RTP8 EXPRESSION TAG SEQADV 8E5S HIS A 27 UNP Q9RTP8 EXPRESSION TAG SEQADV 8E5S HIS A 28 UNP Q9RTP8 EXPRESSION TAG SEQADV 8E5S HIS A 29 UNP Q9RTP8 EXPRESSION TAG SEQADV 8E5S HIS A 30 UNP Q9RTP8 EXPRESSION TAG SEQADV 8E5S HIS A 31 UNP Q9RTP8 EXPRESSION TAG SEQRES 1 A 414 MET HIS HIS HIS HIS HIS HIS HIS HIS ALA GLY PRO ARG SEQRES 2 A 414 GLY VAL ARG ARG ILE LEU PRO PHE LEU GLY PRO ALA VAL SEQRES 3 A 414 ILE ALA SER ILE ALA TYR MET ASP PRO GLY ASN PHE ALA SEQRES 4 A 414 THR ASN ILE GLU GLY GLY ALA ARG TYR GLY TYR SER LEU SEQRES 5 A 414 LEU TRP VAL ILE LEU ALA ALA ASN LEU MET ALA MET VAL SEQRES 6 A 414 ILE GLN ASN LEU SER ALA ASN LEU GLY ILE ALA SER GLY SEQRES 7 A 414 ARG ASN LEU PRO GLU LEU ILE ARG GLU ARG TRP PRO ARG SEQRES 8 A 414 PRO LEU VAL TRP PHE TYR TRP ILE GLN ALA GLU LEU VAL SEQRES 9 A 414 ALA MET ALA THR ASP LEU ALA GLU PHE LEU GLY ALA ALA SEQRES 10 A 414 LEU ALA ILE GLN LEU LEU THR GLY LEU PRO MET PHE TRP SEQRES 11 A 414 GLY ALA VAL VAL THR GLY VAL VAL THR PHE TRP LEU LEU SEQRES 12 A 414 ASN LEU GLN LYS ARG GLY THR ARG PRO LEU GLU LEU ALA SEQRES 13 A 414 VAL GLY ALA PHE VAL LEU MET ILE GLY VAL ALA TYR LEU SEQRES 14 A 414 VAL GLN VAL VAL LEU ALA ARG PRO ASP LEU ALA ALA VAL SEQRES 15 A 414 GLY ALA GLY PHE VAL PRO ARG LEU GLN GLY PRO GLY SER SEQRES 16 A 414 ALA TYR LEU ALA VAL GLY ILE ILE GLY ALA THR VAL MET SEQRES 17 A 414 PRO HIS VAL ILE TYR LEU HIS SER ALA LEU THR GLN GLY SEQRES 18 A 414 ARG ILE GLN THR ASP THR THR GLU GLU LYS ARG ARG LEU SEQRES 19 A 414 VAL ARG LEU ASN ARG VAL ASP VAL ILE ALA ALA MET GLY SEQRES 20 A 414 LEU ALA GLY LEU ILE ASN MET SER MET LEU ALA VAL ALA SEQRES 21 A 414 ALA ALA THR PHE HIS GLY LYS ASN VAL GLU ASN ALA GLY SEQRES 22 A 414 ASP LEU THR THR ALA TYR GLN THR LEU THR PRO LEU LEU SEQRES 23 A 414 GLY PRO ALA ALA SER VAL LEU PHE ALA VAL ALA LEU LEU SEQRES 24 A 414 ALA SER GLY LEU SER SER SER ALA VAL GLY THR MET ALA SEQRES 25 A 414 GLY ASP VAL ILE MET GLN GLY PHE MET GLY PHE HIS ILE SEQRES 26 A 414 PRO LEU TRP LEU ARG ARG LEU ILE THR MET LEU PRO ALA SEQRES 27 A 414 PHE ILE VAL ILE LEU LEU GLY MET ASP PRO SER SER VAL SEQRES 28 A 414 LEU ILE LEU SER GLN VAL ILE LEU CYS PHE GLY VAL PRO SEQRES 29 A 414 PHE ALA LEU VAL PRO LEU LEU LEU PHE THR ALA ARG ARG SEQRES 30 A 414 ASP VAL MET GLY ALA LEU VAL THR ARG ARG SER PHE THR SEQRES 31 A 414 VAL ILE GLY TRP VAL ILE ALA VAL ILE ILE ILE ALA LEU SEQRES 32 A 414 ASN GLY TYR LEU LEU TRP GLU LEU LEU GLY GLY HET NA A 501 1 HET CL A 502 1 HET OLC A 503 25 HET OLC A 504 25 HET OLC A 505 20 HET OLC A 506 15 HET OLC A 507 25 HET OLC A 508 18 HET OLC A 509 25 HET OLC A 510 11 HET OLC A 511 25 HET OLC A 512 21 HET OLC A 513 15 HET OLC A 514 8 HET OLC A 515 19 HET OLC A 516 7 HET OLC A 517 17 HET OLC A 518 23 HET OLC A 519 15 HET OLC A 520 8 HET OLC A 521 15 HET OLC A 522 12 HET OLC A 523 12 HET OLC A 524 20 HET OLC A 525 17 HET OLC A 526 7 HET PEG A 527 5 HET PEG A 528 3 HET PEG A 529 7 HET GOL A 530 6 HET GOL A 531 6 HETNAM NA SODIUM ION HETNAM CL CHLORIDE ION HETNAM OLC (2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-ENOATE HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM GOL GLYCEROL HETSYN OLC 1-OLEOYL-R-GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 NA NA 1+ FORMUL 3 CL CL 1- FORMUL 4 OLC 24(C21 H40 O4) FORMUL 28 PEG 3(C4 H10 O3) FORMUL 31 GOL 2(C3 H8 O3) FORMUL 33 HOH *47(H2 O) HELIX 1 AA1 GLY A 45 ILE A 52 1 8 HELIX 2 AA2 ALA A 53 MET A 55 5 3 HELIX 3 AA3 ASP A 56 GLY A 71 1 16 HELIX 4 AA4 LEU A 74 GLY A 100 1 27 HELIX 5 AA5 ASN A 102 TRP A 111 1 10 HELIX 6 AA6 PRO A 112 GLY A 147 1 36 HELIX 7 AA7 PRO A 149 LEU A 167 1 19 HELIX 8 AA8 GLN A 168 ALA A 197 1 30 HELIX 9 AA9 ASP A 200 GLY A 207 1 8 HELIX 10 AB1 GLY A 214 VAL A 229 1 16 HELIX 11 AB2 MET A 230 GLN A 242 1 13 HELIX 12 AB3 THR A 249 HIS A 287 1 39 HELIX 13 AB4 ASP A 296 THR A 303 5 8 HELIX 14 AB5 LEU A 304 GLY A 309 1 6 HELIX 15 AB6 ALA A 311 GLY A 344 1 34 HELIX 16 AB7 PRO A 348 LEU A 366 1 19 HELIX 17 AB8 ASP A 369 GLY A 384 1 16 HELIX 18 AB9 GLY A 384 THR A 396 1 13 HELIX 19 AC1 ARG A 398 GLY A 403 1 6 HELIX 20 AC2 ALA A 404 VAL A 406 5 3 HELIX 21 AC3 ARG A 408 GLY A 435 1 28 LINK OD1 ASP A 296 NA NA A 501 1555 1555 2.88 LINK OD2 ASP A 296 NA NA A 501 1555 1555 2.34 LINK OD1 ASP A 369 NA NA A 501 1555 1555 3.15 LINK OD2 ASP A 369 NA NA A 501 1555 1555 2.67 LINK OG SER A 371 NA NA A 501 1555 1555 3.19 LINK NA NA A 501 O HOH A 637 1555 1555 2.32 CRYST1 58.658 70.850 98.342 90.00 90.00 90.00 P 2 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017048 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014114 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010169 0.00000