HEADER METAL TRANSPORT 22-AUG-22 8E5V TITLE X-RAY STRUCTURE OF THE DEINOCOCCUS RADIODURANS NRAMP/MNTH DIVALENT TITLE 2 TRANSITION METAL TRANSPORTER WTSOAK IN AN OCCLUDED STATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: DIVALENT METAL CATION TRANSPORTER MNTH; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DEINOCOCCUS RADIODURANS; SOURCE 3 ORGANISM_TAXID: 1299; SOURCE 4 GENE: MNTH, DR_1709; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS MEMBRANE PROTEIN, DIVALENT TRANSITION METAL IMPORTER, LEUT FOLD, KEYWDS 2 NRAMP FAMILY, METAL TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR S.RAY,R.GAUDET REVDAT 2 25-OCT-23 8E5V 1 REMARK REVDAT 1 03-MAY-23 8E5V 0 JRNL AUTH S.RAY,S.P.BERRY,E.A.WILSON,C.H.ZHANG,M.SHEKHAR,A.SINGHAROY, JRNL AUTH 2 R.GAUDET JRNL TITL HIGH-RESOLUTION STRUCTURES WITH BOUND MN 2+ AND CD 2+ MAP JRNL TITL 2 THE METAL IMPORT PATHWAY IN AN NRAMP TRANSPORTER. JRNL REF ELIFE V. 12 2023 JRNL REFN ESSN 2050-084X JRNL PMID 37039477 JRNL DOI 10.7554/ELIFE.84006 REMARK 2 REMARK 2 RESOLUTION. 2.36 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.36 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.23 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 17432 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.220 REMARK 3 R VALUE (WORKING SET) : 0.217 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1743 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.2300 - 5.4000 0.96 1369 151 0.2040 0.2254 REMARK 3 2 5.4000 - 4.2900 0.99 1345 150 0.1868 0.2039 REMARK 3 3 4.2900 - 3.7500 0.98 1302 144 0.1803 0.2088 REMARK 3 4 3.7500 - 3.4000 0.98 1297 144 0.2080 0.2225 REMARK 3 5 3.4000 - 3.1600 0.99 1316 147 0.2186 0.2451 REMARK 3 6 3.1600 - 2.9700 1.00 1305 145 0.2244 0.3044 REMARK 3 7 2.9700 - 2.8200 1.00 1297 144 0.2330 0.2842 REMARK 3 8 2.8200 - 2.7000 1.00 1312 145 0.2639 0.3249 REMARK 3 9 2.7000 - 2.6000 0.99 1298 145 0.2850 0.3209 REMARK 3 10 2.6000 - 2.5100 0.99 1285 143 0.3000 0.3217 REMARK 3 11 2.5100 - 2.4300 0.99 1282 142 0.3033 0.3633 REMARK 3 12 2.4300 - 2.3600 0.99 1281 143 0.3457 0.3473 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.340 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.390 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 49.97 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 65.19 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 45 THROUGH 74 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.5590 -22.4348 30.5683 REMARK 3 T TENSOR REMARK 3 T11: 0.4793 T22: 0.4714 REMARK 3 T33: 0.4600 T12: 0.0734 REMARK 3 T13: 0.0056 T23: 0.0214 REMARK 3 L TENSOR REMARK 3 L11: 2.3597 L22: 2.0119 REMARK 3 L33: 2.7112 L12: 0.4659 REMARK 3 L13: -0.2918 L23: -2.1570 REMARK 3 S TENSOR REMARK 3 S11: -0.2112 S12: 0.7148 S13: -0.1424 REMARK 3 S21: -0.0768 S22: -0.3373 S23: -0.3499 REMARK 3 S31: 0.7586 S32: -0.3346 S33: 0.2064 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 75 THROUGH 146 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.9673 -13.4768 16.4417 REMARK 3 T TENSOR REMARK 3 T11: 0.2994 T22: 0.2923 REMARK 3 T33: 0.4162 T12: 0.0342 REMARK 3 T13: 0.0259 T23: 0.0051 REMARK 3 L TENSOR REMARK 3 L11: 1.0094 L22: 1.9632 REMARK 3 L33: 3.3517 L12: -0.0079 REMARK 3 L13: 0.2109 L23: -1.4103 REMARK 3 S TENSOR REMARK 3 S11: 0.0094 S12: 0.0519 S13: 0.0797 REMARK 3 S21: -0.1909 S22: -0.1135 S23: -0.0118 REMARK 3 S31: 0.0464 S32: 0.2566 S33: 0.1582 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 147 THROUGH 171 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.5695 -19.2012 23.1928 REMARK 3 T TENSOR REMARK 3 T11: 0.6343 T22: 0.5990 REMARK 3 T33: 0.9115 T12: 0.0330 REMARK 3 T13: -0.0787 T23: 0.2409 REMARK 3 L TENSOR REMARK 3 L11: 3.0984 L22: 7.1558 REMARK 3 L33: 3.7111 L12: -0.4275 REMARK 3 L13: -1.1793 L23: 3.1637 REMARK 3 S TENSOR REMARK 3 S11: -0.0089 S12: -0.4040 S13: 0.2563 REMARK 3 S21: -1.5121 S22: 0.1083 S23: -0.6283 REMARK 3 S31: 0.0067 S32: 1.0610 S33: 0.5447 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 172 THROUGH 228 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.7436 -26.5480 33.1729 REMARK 3 T TENSOR REMARK 3 T11: 0.3082 T22: 0.3611 REMARK 3 T33: 0.3080 T12: 0.0030 REMARK 3 T13: -0.0113 T23: 0.0093 REMARK 3 L TENSOR REMARK 3 L11: 2.0707 L22: 3.3755 REMARK 3 L33: 3.2778 L12: 0.8718 REMARK 3 L13: -0.4620 L23: -0.8514 REMARK 3 S TENSOR REMARK 3 S11: -0.0951 S12: -0.1298 S13: -0.1800 REMARK 3 S21: 0.1290 S22: -0.0191 S23: -0.0012 REMARK 3 S31: -0.0040 S32: 0.1096 S33: 0.0661 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 229 THROUGH 249 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.6127 -21.4008 7.3033 REMARK 3 T TENSOR REMARK 3 T11: 0.5507 T22: 0.5063 REMARK 3 T33: 0.4478 T12: -0.0281 REMARK 3 T13: 0.0195 T23: 0.0269 REMARK 3 L TENSOR REMARK 3 L11: 3.3955 L22: 2.6379 REMARK 3 L33: 3.4939 L12: 0.8727 REMARK 3 L13: 1.5172 L23: -1.7509 REMARK 3 S TENSOR REMARK 3 S11: -0.3499 S12: 0.6498 S13: -0.1088 REMARK 3 S21: -0.1946 S22: -0.0083 S23: 0.5809 REMARK 3 S31: 1.1858 S32: 0.2103 S33: -0.0352 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 250 THROUGH 286 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.4298 -29.4201 19.5454 REMARK 3 T TENSOR REMARK 3 T11: 0.5268 T22: 0.3486 REMARK 3 T33: 0.4867 T12: -0.0573 REMARK 3 T13: -0.0139 T23: 0.0125 REMARK 3 L TENSOR REMARK 3 L11: 0.8049 L22: 2.0046 REMARK 3 L33: 8.6472 L12: -0.7911 REMARK 3 L13: 1.4563 L23: -1.5114 REMARK 3 S TENSOR REMARK 3 S11: 0.0531 S12: -0.0313 S13: -0.1465 REMARK 3 S21: -0.5120 S22: 0.1572 S23: 0.1698 REMARK 3 S31: 0.5232 S32: -0.1951 S33: -0.0670 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 287 THROUGH 343 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.7834 -22.6428 31.0466 REMARK 3 T TENSOR REMARK 3 T11: 0.3368 T22: 0.4574 REMARK 3 T33: 0.4323 T12: 0.0647 REMARK 3 T13: -0.0449 T23: 0.0471 REMARK 3 L TENSOR REMARK 3 L11: 1.1785 L22: 2.3513 REMARK 3 L33: 3.7192 L12: -0.3981 REMARK 3 L13: 1.2543 L23: -2.2962 REMARK 3 S TENSOR REMARK 3 S11: -0.1707 S12: -0.1976 S13: -0.1800 REMARK 3 S21: -0.0240 S22: -0.2845 S23: -0.3583 REMARK 3 S31: 0.1776 S32: 0.4334 S33: 0.3980 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 344 THROUGH 397 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.9855 -9.5285 21.4643 REMARK 3 T TENSOR REMARK 3 T11: 0.4297 T22: 0.3114 REMARK 3 T33: 0.4449 T12: -0.0333 REMARK 3 T13: -0.0098 T23: 0.0089 REMARK 3 L TENSOR REMARK 3 L11: 1.1922 L22: 1.2711 REMARK 3 L33: 2.8282 L12: 0.2708 REMARK 3 L13: -0.1585 L23: -0.6860 REMARK 3 S TENSOR REMARK 3 S11: 0.0037 S12: -0.0574 S13: -0.1651 REMARK 3 S21: 0.0418 S22: -0.1279 S23: -0.2984 REMARK 3 S31: -0.2818 S32: 0.6244 S33: 0.2920 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 398 THROUGH 436 ) REMARK 3 ORIGIN FOR THE GROUP (A): -29.6250 -11.0872 18.0246 REMARK 3 T TENSOR REMARK 3 T11: 0.2728 T22: 0.3836 REMARK 3 T33: 0.4030 T12: 0.0564 REMARK 3 T13: -0.0438 T23: 0.0756 REMARK 3 L TENSOR REMARK 3 L11: 1.8465 L22: 2.2556 REMARK 3 L33: 5.5876 L12: -1.6888 REMARK 3 L13: 0.2329 L23: -1.1184 REMARK 3 S TENSOR REMARK 3 S11: -0.2927 S12: -0.1880 S13: -0.0023 REMARK 3 S21: -0.0611 S22: 0.1525 S23: 0.1559 REMARK 3 S31: -0.5002 S32: -0.5662 S33: -0.0458 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8E5V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-AUG-22. REMARK 100 THE DEPOSITION ID IS D_1000267898. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-APR-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.033 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17464 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.360 REMARK 200 RESOLUTION RANGE LOW (A) : 41.230 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : 0.10700 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 5.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.36 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.45 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : 1.32800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 8E5S REMARK 200 REMARK 200 REMARK: 40 MICRON IN SIZE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.02 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 28% PEG400, 0.1 M MES, PH 6.3, 50 MM REMARK 280 SUCCINIC ACID, PH 6.0, 5 MM SPERMIDINE, PH 7.0, LIPIDIC CUBIC REMARK 280 PHASE, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 2 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 X,-Y,-Z REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 -X,-Y+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.51850 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 49.38650 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 35.51850 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 49.38650 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 750 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17780 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 23 REMARK 465 HIS A 24 REMARK 465 HIS A 25 REMARK 465 HIS A 26 REMARK 465 HIS A 27 REMARK 465 HIS A 28 REMARK 465 HIS A 29 REMARK 465 HIS A 30 REMARK 465 HIS A 31 REMARK 465 ALA A 32 REMARK 465 GLY A 33 REMARK 465 PRO A 34 REMARK 465 ARG A 35 REMARK 465 GLY A 36 REMARK 465 VAL A 37 REMARK 465 ARG A 38 REMARK 465 ARG A 39 REMARK 465 ILE A 40 REMARK 465 LEU A 41 REMARK 465 PRO A 42 REMARK 465 PHE A 43 REMARK 465 LEU A 44 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 168 CG CD OE1 NE2 REMARK 470 LYS A 169 CG CD CE NZ REMARK 470 ARG A 170 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 173 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 408 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 213 66.83 -118.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 OLC A 503 REMARK 610 OLC A 504 REMARK 610 OLC A 505 REMARK 610 OLC A 506 REMARK 610 OLC A 507 REMARK 610 OLC A 508 REMARK 610 OLC A 510 REMARK 610 OLC A 511 REMARK 610 OLC A 513 REMARK 610 OLC A 514 REMARK 610 OLC A 516 REMARK 610 OLC A 517 REMARK 610 OLC A 518 REMARK 610 OLC A 520 REMARK 610 OLC A 521 REMARK 610 OLC A 522 REMARK 610 OLC A 523 REMARK 610 OLC A 524 REMARK 610 OLC A 525 REMARK 610 OLC A 526 REMARK 610 OLC A 528 REMARK 610 OLC A 529 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 501 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 296 OD1 REMARK 620 2 ASP A 296 OD2 47.2 REMARK 620 3 ASP A 369 OD1 108.3 95.3 REMARK 620 4 ASP A 369 OD2 123.0 80.8 46.5 REMARK 620 5 HOH A 631 O 110.3 118.6 140.0 115.2 REMARK 620 6 HOH A 635 O 99.4 75.3 131.6 85.1 50.3 REMARK 620 7 HOH A 647 O 72.7 119.9 102.7 146.8 79.3 123.4 REMARK 620 N 1 2 3 4 5 6 DBREF 8E5V A 32 436 UNP Q9RTP8 MNTH_DEIRA 32 436 SEQADV 8E5V MET A 23 UNP Q9RTP8 EXPRESSION TAG SEQADV 8E5V HIS A 24 UNP Q9RTP8 EXPRESSION TAG SEQADV 8E5V HIS A 25 UNP Q9RTP8 EXPRESSION TAG SEQADV 8E5V HIS A 26 UNP Q9RTP8 EXPRESSION TAG SEQADV 8E5V HIS A 27 UNP Q9RTP8 EXPRESSION TAG SEQADV 8E5V HIS A 28 UNP Q9RTP8 EXPRESSION TAG SEQADV 8E5V HIS A 29 UNP Q9RTP8 EXPRESSION TAG SEQADV 8E5V HIS A 30 UNP Q9RTP8 EXPRESSION TAG SEQADV 8E5V HIS A 31 UNP Q9RTP8 EXPRESSION TAG SEQRES 1 A 414 MET HIS HIS HIS HIS HIS HIS HIS HIS ALA GLY PRO ARG SEQRES 2 A 414 GLY VAL ARG ARG ILE LEU PRO PHE LEU GLY PRO ALA VAL SEQRES 3 A 414 ILE ALA SER ILE ALA TYR MET ASP PRO GLY ASN PHE ALA SEQRES 4 A 414 THR ASN ILE GLU GLY GLY ALA ARG TYR GLY TYR SER LEU SEQRES 5 A 414 LEU TRP VAL ILE LEU ALA ALA ASN LEU MET ALA MET VAL SEQRES 6 A 414 ILE GLN ASN LEU SER ALA ASN LEU GLY ILE ALA SER GLY SEQRES 7 A 414 ARG ASN LEU PRO GLU LEU ILE ARG GLU ARG TRP PRO ARG SEQRES 8 A 414 PRO LEU VAL TRP PHE TYR TRP ILE GLN ALA GLU LEU VAL SEQRES 9 A 414 ALA MET ALA THR ASP LEU ALA GLU PHE LEU GLY ALA ALA SEQRES 10 A 414 LEU ALA ILE GLN LEU LEU THR GLY LEU PRO MET PHE TRP SEQRES 11 A 414 GLY ALA VAL VAL THR GLY VAL VAL THR PHE TRP LEU LEU SEQRES 12 A 414 ASN LEU GLN LYS ARG GLY THR ARG PRO LEU GLU LEU ALA SEQRES 13 A 414 VAL GLY ALA PHE VAL LEU MET ILE GLY VAL ALA TYR LEU SEQRES 14 A 414 VAL GLN VAL VAL LEU ALA ARG PRO ASP LEU ALA ALA VAL SEQRES 15 A 414 GLY ALA GLY PHE VAL PRO ARG LEU GLN GLY PRO GLY SER SEQRES 16 A 414 ALA TYR LEU ALA VAL GLY ILE ILE GLY ALA THR VAL MET SEQRES 17 A 414 PRO HIS VAL ILE TYR LEU HIS SER ALA LEU THR GLN GLY SEQRES 18 A 414 ARG ILE GLN THR ASP THR THR GLU GLU LYS ARG ARG LEU SEQRES 19 A 414 VAL ARG LEU ASN ARG VAL ASP VAL ILE ALA ALA MET GLY SEQRES 20 A 414 LEU ALA GLY LEU ILE ASN MET SER MET LEU ALA VAL ALA SEQRES 21 A 414 ALA ALA THR PHE HIS GLY LYS ASN VAL GLU ASN ALA GLY SEQRES 22 A 414 ASP LEU THR THR ALA TYR GLN THR LEU THR PRO LEU LEU SEQRES 23 A 414 GLY PRO ALA ALA SER VAL LEU PHE ALA VAL ALA LEU LEU SEQRES 24 A 414 ALA SER GLY LEU SER SER SER ALA VAL GLY THR MET ALA SEQRES 25 A 414 GLY ASP VAL ILE MET GLN GLY PHE MET GLY PHE HIS ILE SEQRES 26 A 414 PRO LEU TRP LEU ARG ARG LEU ILE THR MET LEU PRO ALA SEQRES 27 A 414 PHE ILE VAL ILE LEU LEU GLY MET ASP PRO SER SER VAL SEQRES 28 A 414 LEU ILE LEU SER GLN VAL ILE LEU CYS PHE GLY VAL PRO SEQRES 29 A 414 PHE ALA LEU VAL PRO LEU LEU LEU PHE THR ALA ARG ARG SEQRES 30 A 414 ASP VAL MET GLY ALA LEU VAL THR ARG ARG SER PHE THR SEQRES 31 A 414 VAL ILE GLY TRP VAL ILE ALA VAL ILE ILE ILE ALA LEU SEQRES 32 A 414 ASN GLY TYR LEU LEU TRP GLU LEU LEU GLY GLY HET NA A 501 1 HET CL A 502 1 HET OLC A 503 19 HET OLC A 504 18 HET OLC A 505 13 HET OLC A 506 18 HET OLC A 507 23 HET OLC A 508 18 HET OLC A 509 25 HET OLC A 510 14 HET OLC A 511 11 HET OLC A 512 25 HET OLC A 513 7 HET OLC A 514 8 HET OLC A 515 25 HET OLC A 516 8 HET OLC A 517 16 HET OLC A 518 11 HET OLC A 519 25 HET OLC A 520 7 HET OLC A 521 11 HET OLC A 522 9 HET OLC A 523 23 HET OLC A 524 8 HET OLC A 525 11 HET OLC A 526 18 HET OLC A 527 25 HET OLC A 528 22 HET OLC A 529 9 HET PEG A 530 7 HET PEG A 531 7 HETNAM NA SODIUM ION HETNAM CL CHLORIDE ION HETNAM OLC (2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-ENOATE HETNAM PEG DI(HYDROXYETHYL)ETHER HETSYN OLC 1-OLEOYL-R-GLYCEROL FORMUL 2 NA NA 1+ FORMUL 3 CL CL 1- FORMUL 4 OLC 27(C21 H40 O4) FORMUL 31 PEG 2(C4 H10 O3) FORMUL 33 HOH *61(H2 O) HELIX 1 AA1 GLY A 45 TYR A 54 1 10 HELIX 2 AA2 ASP A 56 GLY A 71 1 16 HELIX 3 AA3 LEU A 74 GLY A 100 1 27 HELIX 4 AA4 ASN A 102 TRP A 111 1 10 HELIX 5 AA5 PRO A 112 GLY A 147 1 36 HELIX 6 AA6 PRO A 149 ASN A 166 1 18 HELIX 7 AA7 GLY A 171 ALA A 197 1 27 HELIX 8 AA8 ASP A 200 PHE A 208 1 9 HELIX 9 AA9 GLY A 214 VAL A 229 1 16 HELIX 10 AB1 MET A 230 THR A 241 1 12 HELIX 11 AB2 THR A 249 HIS A 287 1 39 HELIX 12 AB3 THR A 299 THR A 303 5 5 HELIX 13 AB4 LEU A 304 GLY A 309 1 6 HELIX 14 AB5 ALA A 311 GLY A 344 1 34 HELIX 15 AB6 PRO A 348 LEU A 366 1 19 HELIX 16 AB7 ASP A 369 PHE A 383 1 15 HELIX 17 AB8 GLY A 384 THR A 396 1 13 HELIX 18 AB9 ARG A 398 GLY A 403 1 6 HELIX 19 AC1 ALA A 404 VAL A 406 5 3 HELIX 20 AC2 ARG A 408 GLY A 435 1 28 LINK OD1 ASP A 296 NA NA A 501 1555 1555 2.96 LINK OD2 ASP A 296 NA NA A 501 1555 1555 2.31 LINK OD1 ASP A 369 NA NA A 501 1555 1555 2.97 LINK OD2 ASP A 369 NA NA A 501 1555 1555 2.45 LINK NA NA A 501 O HOH A 631 1555 1555 2.96 LINK NA NA A 501 O HOH A 635 1555 1555 2.37 LINK NA NA A 501 O HOH A 647 1555 1555 2.29 CRYST1 58.954 71.037 98.773 90.00 90.00 90.00 P 2 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016962 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014077 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010124 0.00000