HEADER METAL TRANSPORT 22-AUG-22 8E60 TITLE X-RAY STRUCTURE OF THE DEINOCOCCUS RADIODURANS NRAMP/MNTH DIVALENT TITLE 2 TRANSITION METAL TRANSPORTER WT IN AN OCCLUDED, MANGANESE-BOUND STATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: DIVALENT METAL CATION TRANSPORTER MNTH; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DEINOCOCCUS RADIODURANS; SOURCE 3 ORGANISM_TAXID: 1299; SOURCE 4 GENE: MNTH, DR_1709; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS MEMBRANE PROTEIN, DIVALENT TRANSITION METAL IMPORTER, LEUT FOLD, KEYWDS 2 NRAMP FAMILY, METAL TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR S.RAY,R.GAUDET REVDAT 2 25-OCT-23 8E60 1 REMARK REVDAT 1 03-MAY-23 8E60 0 JRNL AUTH S.RAY,S.P.BERRY,E.A.WILSON,C.H.ZHANG,M.SHEKHAR,A.SINGHAROY, JRNL AUTH 2 R.GAUDET JRNL TITL HIGH-RESOLUTION STRUCTURES WITH BOUND MN 2+ AND CD 2+ MAP JRNL TITL 2 THE METAL IMPORT PATHWAY IN AN NRAMP TRANSPORTER. JRNL REF ELIFE V. 12 2023 JRNL REFN ESSN 2050-084X JRNL PMID 37039477 JRNL DOI 10.7554/ELIFE.84006 REMARK 2 REMARK 2 RESOLUTION. 2.38 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.38 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.28 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.1 REMARK 3 NUMBER OF REFLECTIONS : 16423 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.213 REMARK 3 R VALUE (WORKING SET) : 0.208 REMARK 3 FREE R VALUE : 0.259 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1642 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.2800 - 5.4500 0.89 1254 140 0.2033 0.2530 REMARK 3 2 5.4400 - 4.3200 0.93 1246 138 0.1791 0.2502 REMARK 3 3 4.3200 - 3.7800 0.93 1216 135 0.1844 0.2083 REMARK 3 4 3.7800 - 3.4300 0.95 1227 136 0.1800 0.2207 REMARK 3 5 3.4300 - 3.1900 0.96 1241 138 0.2083 0.2557 REMARK 3 6 3.1900 - 3.0000 0.96 1225 137 0.2247 0.2740 REMARK 3 7 3.0000 - 2.8500 0.96 1237 137 0.2289 0.3453 REMARK 3 8 2.8500 - 2.7200 0.97 1241 138 0.2523 0.3033 REMARK 3 9 2.7200 - 2.6200 0.94 1201 132 0.2497 0.3106 REMARK 3 10 2.6200 - 2.5300 0.97 1223 136 0.2677 0.3582 REMARK 3 11 2.5300 - 2.4500 0.97 1228 137 0.2879 0.2991 REMARK 3 12 2.4500 - 2.3800 0.97 1242 138 0.3126 0.3687 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.340 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.630 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 50.55 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 64.99 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 45 THROUGH 74 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.5368 -22.4348 30.5465 REMARK 3 T TENSOR REMARK 3 T11: 0.4980 T22: 0.4123 REMARK 3 T33: 0.4721 T12: 0.0231 REMARK 3 T13: 0.0265 T23: -0.0228 REMARK 3 L TENSOR REMARK 3 L11: 2.3464 L22: 2.6180 REMARK 3 L33: 3.0375 L12: -0.0604 REMARK 3 L13: -0.3981 L23: -2.5167 REMARK 3 S TENSOR REMARK 3 S11: -0.1848 S12: 0.5096 S13: -0.1306 REMARK 3 S21: 0.2033 S22: -0.1479 S23: -0.3865 REMARK 3 S31: 0.7660 S32: -0.2356 S33: 0.2707 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 75 THROUGH 146 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.1039 -13.4970 16.2907 REMARK 3 T TENSOR REMARK 3 T11: 0.3574 T22: 0.2881 REMARK 3 T33: 0.4106 T12: 0.0194 REMARK 3 T13: 0.0037 T23: 0.0445 REMARK 3 L TENSOR REMARK 3 L11: 0.0658 L22: 0.9082 REMARK 3 L33: 3.2898 L12: 0.0558 REMARK 3 L13: 0.2323 L23: -1.1714 REMARK 3 S TENSOR REMARK 3 S11: -0.0249 S12: 0.0091 S13: 0.0246 REMARK 3 S21: -0.1782 S22: -0.1292 S23: -0.2237 REMARK 3 S31: 0.0895 S32: 0.3069 S33: 0.2078 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 147 THROUGH 228 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.0465 -24.2194 29.9882 REMARK 3 T TENSOR REMARK 3 T11: 0.3417 T22: 0.3266 REMARK 3 T33: 0.3832 T12: 0.0004 REMARK 3 T13: 0.0100 T23: 0.0500 REMARK 3 L TENSOR REMARK 3 L11: 1.6400 L22: 2.9031 REMARK 3 L33: 2.1655 L12: 0.9530 REMARK 3 L13: -0.4503 L23: -1.0955 REMARK 3 S TENSOR REMARK 3 S11: -0.1741 S12: 0.0698 S13: -0.1547 REMARK 3 S21: -0.1923 S22: -0.0620 S23: -0.6280 REMARK 3 S31: 0.0204 S32: 0.2997 S33: 0.2886 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 229 THROUGH 249 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.4282 -21.3499 7.3605 REMARK 3 T TENSOR REMARK 3 T11: 0.6831 T22: 0.5955 REMARK 3 T33: 0.5460 T12: -0.0556 REMARK 3 T13: 0.0999 T23: -0.0374 REMARK 3 L TENSOR REMARK 3 L11: 3.4735 L22: 3.9159 REMARK 3 L33: 4.3993 L12: 0.5442 REMARK 3 L13: 1.9846 L23: -0.2860 REMARK 3 S TENSOR REMARK 3 S11: -0.1396 S12: 1.1426 S13: -0.5962 REMARK 3 S21: -0.4072 S22: -0.1319 S23: -0.7435 REMARK 3 S31: 1.4468 S32: 0.6938 S33: -0.0498 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 250 THROUGH 286 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.4263 -29.4048 19.5137 REMARK 3 T TENSOR REMARK 3 T11: 0.5213 T22: 0.3472 REMARK 3 T33: 0.4554 T12: -0.1070 REMARK 3 T13: 0.0065 T23: 0.0404 REMARK 3 L TENSOR REMARK 3 L11: 0.9157 L22: 2.1154 REMARK 3 L33: 8.5587 L12: -0.7527 REMARK 3 L13: 1.3857 L23: -1.2370 REMARK 3 S TENSOR REMARK 3 S11: -0.1799 S12: 0.0803 S13: -0.1209 REMARK 3 S21: -0.6046 S22: 0.0585 S23: 0.1413 REMARK 3 S31: 0.7918 S32: 0.2588 S33: -0.1023 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 287 THROUGH 343 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.7659 -22.6124 31.0228 REMARK 3 T TENSOR REMARK 3 T11: 0.3028 T22: 0.4315 REMARK 3 T33: 0.4345 T12: 0.0284 REMARK 3 T13: -0.0316 T23: 0.0508 REMARK 3 L TENSOR REMARK 3 L11: 1.3538 L22: 2.8324 REMARK 3 L33: 3.4833 L12: -0.5345 REMARK 3 L13: 0.7970 L23: -2.7659 REMARK 3 S TENSOR REMARK 3 S11: 0.0519 S12: -0.0682 S13: -0.0465 REMARK 3 S21: -0.4460 S22: -0.5029 S23: -0.4314 REMARK 3 S31: 0.4548 S32: 0.6680 S33: 0.4449 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 344 THROUGH 397 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.9900 -9.4103 21.2479 REMARK 3 T TENSOR REMARK 3 T11: 0.3873 T22: 0.3864 REMARK 3 T33: 0.4624 T12: -0.0737 REMARK 3 T13: -0.0391 T23: 0.0315 REMARK 3 L TENSOR REMARK 3 L11: 0.7449 L22: 1.5930 REMARK 3 L33: 2.7462 L12: 0.2889 REMARK 3 L13: -0.2679 L23: -1.2733 REMARK 3 S TENSOR REMARK 3 S11: 0.0305 S12: -0.0344 S13: -0.2866 REMARK 3 S21: 0.0107 S22: -0.2074 S23: -0.4712 REMARK 3 S31: -0.3385 S32: 0.7498 S33: 0.3804 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 398 THROUGH 436 ) REMARK 3 ORIGIN FOR THE GROUP (A): -29.8237 -11.5150 17.4049 REMARK 3 T TENSOR REMARK 3 T11: 0.1766 T22: 0.3488 REMARK 3 T33: 0.3688 T12: 0.0858 REMARK 3 T13: -0.0424 T23: 0.0677 REMARK 3 L TENSOR REMARK 3 L11: 2.4313 L22: 3.0519 REMARK 3 L33: 6.0678 L12: -1.0566 REMARK 3 L13: 0.2664 L23: -0.7510 REMARK 3 S TENSOR REMARK 3 S11: -0.1064 S12: -0.3684 S13: 0.0147 REMARK 3 S21: -0.2601 S22: 0.2361 S23: 0.0743 REMARK 3 S31: -0.1026 S32: -0.9716 S33: -0.0673 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8E60 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-AUG-22. REMARK 100 THE DEPOSITION ID IS D_1000267900. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-APR-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.033 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16467 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.380 REMARK 200 RESOLUTION RANGE LOW (A) : 41.280 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.0 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.10900 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 8.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.38 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.47 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : 1.29200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 8E5V REMARK 200 REMARK 200 REMARK: 35 MICRON IN SIZE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.17 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 24% PEG400, 0.1 M MES, PH 5.9, 50 MM REMARK 280 SUCCINIC ACID, PH 6.0, 5 MM SPERMIDINE, PH 7.0, LIPIDIC CUBIC REMARK 280 PHASE, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 2 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 X,-Y,-Z REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 -X,-Y+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.55050 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 49.37350 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 35.55050 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 49.37350 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1330 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18510 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 23 REMARK 465 HIS A 24 REMARK 465 HIS A 25 REMARK 465 HIS A 26 REMARK 465 HIS A 27 REMARK 465 HIS A 28 REMARK 465 HIS A 29 REMARK 465 HIS A 30 REMARK 465 HIS A 31 REMARK 465 ALA A 32 REMARK 465 GLY A 33 REMARK 465 PRO A 34 REMARK 465 ARG A 35 REMARK 465 GLY A 36 REMARK 465 VAL A 37 REMARK 465 ARG A 38 REMARK 465 ARG A 39 REMARK 465 ILE A 40 REMARK 465 LEU A 41 REMARK 465 PRO A 42 REMARK 465 PHE A 43 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 44 CG CD1 CD2 REMARK 470 GLN A 168 CG CD OE1 NE2 REMARK 470 LYS A 169 CG CD CE NZ REMARK 470 ARG A 170 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 173 CG CD NE CZ NH1 NH2 REMARK 470 TYR A 428 CG CD1 CD2 CE1 CE2 CZ OH REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 198 73.04 50.79 REMARK 500 ASP A 248 79.41 -68.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 OLC A 505 REMARK 610 OLC A 507 REMARK 610 OLC A 508 REMARK 610 OLC A 509 REMARK 610 OLC A 511 REMARK 610 OLC A 512 REMARK 610 OLC A 513 REMARK 610 OLC A 514 REMARK 610 OLC A 515 REMARK 610 OLC A 517 REMARK 610 OLC A 518 REMARK 610 OLC A 519 REMARK 610 OLC A 520 REMARK 610 OLC A 521 REMARK 610 OLC A 522 REMARK 610 OLC A 523 REMARK 610 OLC A 524 REMARK 610 OLC A 525 REMARK 610 OLC A 526 REMARK 610 PEG A 529 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 501 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA A 53 O REMARK 620 2 ASP A 56 OD1 88.2 REMARK 620 3 ASN A 59 OD1 101.7 67.1 REMARK 620 4 ALA A 227 O 137.3 133.6 90.5 REMARK 620 5 MET A 230 SD 77.4 131.6 160.9 78.3 REMARK 620 6 HOH A 605 O 131.7 58.2 95.8 86.4 98.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 502 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 296 OD2 REMARK 620 2 ASP A 369 OD2 86.7 REMARK 620 3 HOH A 619 O 116.9 135.1 REMARK 620 4 HOH A 642 O 92.9 87.2 125.7 REMARK 620 N 1 2 3 DBREF 8E60 A 32 436 UNP Q9RTP8 MNTH_DEIRA 32 436 SEQADV 8E60 MET A 23 UNP Q9RTP8 EXPRESSION TAG SEQADV 8E60 HIS A 24 UNP Q9RTP8 EXPRESSION TAG SEQADV 8E60 HIS A 25 UNP Q9RTP8 EXPRESSION TAG SEQADV 8E60 HIS A 26 UNP Q9RTP8 EXPRESSION TAG SEQADV 8E60 HIS A 27 UNP Q9RTP8 EXPRESSION TAG SEQADV 8E60 HIS A 28 UNP Q9RTP8 EXPRESSION TAG SEQADV 8E60 HIS A 29 UNP Q9RTP8 EXPRESSION TAG SEQADV 8E60 HIS A 30 UNP Q9RTP8 EXPRESSION TAG SEQADV 8E60 HIS A 31 UNP Q9RTP8 EXPRESSION TAG SEQRES 1 A 414 MET HIS HIS HIS HIS HIS HIS HIS HIS ALA GLY PRO ARG SEQRES 2 A 414 GLY VAL ARG ARG ILE LEU PRO PHE LEU GLY PRO ALA VAL SEQRES 3 A 414 ILE ALA SER ILE ALA TYR MET ASP PRO GLY ASN PHE ALA SEQRES 4 A 414 THR ASN ILE GLU GLY GLY ALA ARG TYR GLY TYR SER LEU SEQRES 5 A 414 LEU TRP VAL ILE LEU ALA ALA ASN LEU MET ALA MET VAL SEQRES 6 A 414 ILE GLN ASN LEU SER ALA ASN LEU GLY ILE ALA SER GLY SEQRES 7 A 414 ARG ASN LEU PRO GLU LEU ILE ARG GLU ARG TRP PRO ARG SEQRES 8 A 414 PRO LEU VAL TRP PHE TYR TRP ILE GLN ALA GLU LEU VAL SEQRES 9 A 414 ALA MET ALA THR ASP LEU ALA GLU PHE LEU GLY ALA ALA SEQRES 10 A 414 LEU ALA ILE GLN LEU LEU THR GLY LEU PRO MET PHE TRP SEQRES 11 A 414 GLY ALA VAL VAL THR GLY VAL VAL THR PHE TRP LEU LEU SEQRES 12 A 414 ASN LEU GLN LYS ARG GLY THR ARG PRO LEU GLU LEU ALA SEQRES 13 A 414 VAL GLY ALA PHE VAL LEU MET ILE GLY VAL ALA TYR LEU SEQRES 14 A 414 VAL GLN VAL VAL LEU ALA ARG PRO ASP LEU ALA ALA VAL SEQRES 15 A 414 GLY ALA GLY PHE VAL PRO ARG LEU GLN GLY PRO GLY SER SEQRES 16 A 414 ALA TYR LEU ALA VAL GLY ILE ILE GLY ALA THR VAL MET SEQRES 17 A 414 PRO HIS VAL ILE TYR LEU HIS SER ALA LEU THR GLN GLY SEQRES 18 A 414 ARG ILE GLN THR ASP THR THR GLU GLU LYS ARG ARG LEU SEQRES 19 A 414 VAL ARG LEU ASN ARG VAL ASP VAL ILE ALA ALA MET GLY SEQRES 20 A 414 LEU ALA GLY LEU ILE ASN MET SER MET LEU ALA VAL ALA SEQRES 21 A 414 ALA ALA THR PHE HIS GLY LYS ASN VAL GLU ASN ALA GLY SEQRES 22 A 414 ASP LEU THR THR ALA TYR GLN THR LEU THR PRO LEU LEU SEQRES 23 A 414 GLY PRO ALA ALA SER VAL LEU PHE ALA VAL ALA LEU LEU SEQRES 24 A 414 ALA SER GLY LEU SER SER SER ALA VAL GLY THR MET ALA SEQRES 25 A 414 GLY ASP VAL ILE MET GLN GLY PHE MET GLY PHE HIS ILE SEQRES 26 A 414 PRO LEU TRP LEU ARG ARG LEU ILE THR MET LEU PRO ALA SEQRES 27 A 414 PHE ILE VAL ILE LEU LEU GLY MET ASP PRO SER SER VAL SEQRES 28 A 414 LEU ILE LEU SER GLN VAL ILE LEU CYS PHE GLY VAL PRO SEQRES 29 A 414 PHE ALA LEU VAL PRO LEU LEU LEU PHE THR ALA ARG ARG SEQRES 30 A 414 ASP VAL MET GLY ALA LEU VAL THR ARG ARG SER PHE THR SEQRES 31 A 414 VAL ILE GLY TRP VAL ILE ALA VAL ILE ILE ILE ALA LEU SEQRES 32 A 414 ASN GLY TYR LEU LEU TRP GLU LEU LEU GLY GLY HET MN A 501 1 HET MN A 502 1 HET CL A 503 1 HET OLC A 504 25 HET OLC A 505 14 HET OLC A 506 25 HET OLC A 507 18 HET OLC A 508 16 HET OLC A 509 13 HET OLC A 510 25 HET OLC A 511 17 HET OLC A 512 13 HET OLC A 513 7 HET OLC A 514 16 HET OLC A 515 9 HET OLC A 516 25 HET OLC A 517 8 HET OLC A 518 15 HET OLC A 519 16 HET OLC A 520 24 HET OLC A 521 16 HET OLC A 522 18 HET OLC A 523 16 HET OLC A 524 19 HET OLC A 525 7 HET OLC A 526 15 HET PEG A 527 7 HET PEG A 528 7 HET PEG A 529 5 HET GOL A 530 6 HETNAM MN MANGANESE (II) ION HETNAM CL CHLORIDE ION HETNAM OLC (2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-ENOATE HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM GOL GLYCEROL HETSYN OLC 1-OLEOYL-R-GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 MN 2(MN 2+) FORMUL 4 CL CL 1- FORMUL 5 OLC 23(C21 H40 O4) FORMUL 28 PEG 3(C4 H10 O3) FORMUL 31 GOL C3 H8 O3 FORMUL 32 HOH *47(H2 O) HELIX 1 AA1 GLY A 45 TYR A 54 1 10 HELIX 2 AA2 ASP A 56 GLY A 71 1 16 HELIX 3 AA3 LEU A 74 GLY A 100 1 27 HELIX 4 AA4 ASN A 102 TRP A 111 1 10 HELIX 5 AA5 PRO A 112 GLY A 147 1 36 HELIX 6 AA6 PRO A 149 ASN A 166 1 18 HELIX 7 AA7 GLN A 168 ALA A 197 1 30 HELIX 8 AA8 ASP A 200 PHE A 208 1 9 HELIX 9 AA9 GLY A 214 VAL A 229 1 16 HELIX 10 AB1 MET A 230 THR A 241 1 12 HELIX 11 AB2 THR A 249 HIS A 287 1 39 HELIX 12 AB3 THR A 299 THR A 303 5 5 HELIX 13 AB4 LEU A 304 GLY A 309 1 6 HELIX 14 AB5 ALA A 311 GLY A 344 1 34 HELIX 15 AB6 PRO A 348 LEU A 366 1 19 HELIX 16 AB7 ASP A 369 GLY A 384 1 16 HELIX 17 AB8 GLY A 384 THR A 396 1 13 HELIX 18 AB9 ARG A 398 GLY A 403 1 6 HELIX 19 AC1 ALA A 404 VAL A 406 5 3 HELIX 20 AC2 ARG A 408 GLY A 435 1 28 LINK O ALA A 53 MN MN A 501 1555 1555 2.23 LINK OD1 ASP A 56 MN MN A 501 1555 1555 2.68 LINK OD1 ASN A 59 MN MN A 501 1555 1555 2.35 LINK O ALA A 227 MN MN A 501 1555 1555 2.46 LINK SD MET A 230 MN MN A 501 1555 1555 2.80 LINK OD2 ASP A 296 MN MN A 502 1555 1555 2.11 LINK OD2 ASP A 369 MN MN A 502 1555 1555 2.31 LINK MN MN A 501 O HOH A 605 1555 1555 2.31 LINK MN MN A 502 O HOH A 619 1555 1555 2.25 LINK MN MN A 502 O HOH A 642 1555 1555 2.66 CRYST1 59.076 71.101 98.747 90.00 90.00 90.00 P 2 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016927 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014064 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010127 0.00000