HEADER TRANSFERASE 26-AUG-22 8E9P TITLE CRYSTAL STRUCTURE OF WILD-TYPE E. COLI ASPARTATE AMINOTRANSFERASE IN TITLE 2 THE LIGAND-FREE FORM AT 278 K COMPND MOL_ID: 1; COMPND 2 MOLECULE: ASPARTATE AMINOTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ASPAT,TRANSAMINASE A; COMPND 5 EC: 2.6.1.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: ASPC, B0928, JW0911; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ENZYME, DESIGNED PROTEIN, MUTANT PROTEIN, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR R.A.CHICA,A.D.ST-JACQUES,J.M.RODRIGUEZ,M.C.THOMPSON REVDAT 3 18-OCT-23 8E9P 1 REMARK REVDAT 2 11-OCT-23 8E9P 1 JRNL REVDAT 1 02-NOV-22 8E9P 0 JRNL AUTH A.D.ST-JACQUES,J.M.RODRIGUEZ,M.G.EASON,S.M.FOSTER,S.T.KHAN, JRNL AUTH 2 A.M.DAMRY,N.K.GOTO,M.C.THOMPSON,R.A.CHICA JRNL TITL COMPUTATIONAL REMODELING OF AN ENZYME CONFORMATIONAL JRNL TITL 2 LANDSCAPE FOR ALTERED SUBSTRATE SELECTIVITY. JRNL REF NAT COMMUN V. 14 6058 2023 JRNL REFN ESSN 2041-1723 JRNL PMID 37770431 JRNL DOI 10.1038/S41467-023-41762-0 REMARK 2 REMARK 2 RESOLUTION. 2.08 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.08 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.08 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 56664 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.177 REMARK 3 R VALUE (WORKING SET) : 0.174 REMARK 3 FREE R VALUE : 0.206 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.080 REMARK 3 FREE R VALUE TEST SET COUNT : 5709 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.0800 - 6.4700 0.99 1790 190 0.1455 0.1597 REMARK 3 2 6.4600 - 5.1400 1.00 1743 199 0.1368 0.1667 REMARK 3 3 5.1300 - 4.4900 1.00 1754 189 0.1129 0.1418 REMARK 3 4 4.4900 - 4.0800 1.00 1756 194 0.1038 0.1584 REMARK 3 5 4.0800 - 3.7800 1.00 1710 203 0.1143 0.1309 REMARK 3 6 3.7800 - 3.5600 1.00 1735 182 0.1315 0.1441 REMARK 3 7 3.5600 - 3.3800 1.00 1756 171 0.1519 0.1912 REMARK 3 8 3.3800 - 3.2400 1.00 1729 194 0.1683 0.2091 REMARK 3 9 3.2400 - 3.1100 1.00 1715 201 0.1786 0.2258 REMARK 3 10 3.1100 - 3.0000 1.00 1709 208 0.1993 0.2353 REMARK 3 11 3.0000 - 2.9100 1.00 1689 231 0.1948 0.2143 REMARK 3 12 2.9100 - 2.8300 1.00 1748 178 0.2030 0.2984 REMARK 3 13 2.8300 - 2.7500 1.00 1712 197 0.2082 0.2496 REMARK 3 14 2.7500 - 2.6800 1.00 1716 204 0.2150 0.2658 REMARK 3 15 2.6800 - 2.6200 1.00 1690 188 0.2171 0.2578 REMARK 3 16 2.6200 - 2.5700 1.00 1743 194 0.2157 0.2443 REMARK 3 17 2.5700 - 2.5200 1.00 1735 180 0.2272 0.2505 REMARK 3 18 2.5200 - 2.4700 1.00 1680 200 0.2278 0.2638 REMARK 3 19 2.4700 - 2.4300 1.00 1749 192 0.2387 0.2390 REMARK 3 20 2.4200 - 2.3800 1.00 1732 183 0.2492 0.3054 REMARK 3 21 2.3800 - 2.3500 1.00 1741 170 0.2493 0.2684 REMARK 3 22 2.3500 - 2.3100 1.00 1747 166 0.2592 0.2728 REMARK 3 23 2.3100 - 2.2800 1.00 1688 197 0.2634 0.2713 REMARK 3 24 2.2800 - 2.2400 1.00 1711 212 0.2755 0.3182 REMARK 3 25 2.2400 - 2.2100 1.00 1688 213 0.2900 0.3166 REMARK 3 26 2.2100 - 2.1800 1.00 1713 196 0.2986 0.3248 REMARK 3 27 2.1800 - 2.1600 1.00 1730 201 0.3062 0.3163 REMARK 3 28 2.1600 - 2.1300 0.99 1689 186 0.3359 0.3533 REMARK 3 29 2.1300 - 2.1100 0.97 1691 187 0.3457 0.3624 REMARK 3 30 2.1100 - 2.0800 0.56 966 103 0.3500 0.3252 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.282 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.275 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 39.46 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 48.36 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 6549 REMARK 3 ANGLE : 0.486 8929 REMARK 3 CHIRALITY : 0.038 975 REMARK 3 PLANARITY : 0.003 1196 REMARK 3 DIHEDRAL : 19.870 2349 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -2 THROUGH 32 ) REMARK 3 ORIGIN FOR THE GROUP (A): 51.9557 75.2039 -4.9698 REMARK 3 T TENSOR REMARK 3 T11: 0.4826 T22: 0.5157 REMARK 3 T33: 0.5248 T12: -0.1244 REMARK 3 T13: -0.0708 T23: 0.0412 REMARK 3 L TENSOR REMARK 3 L11: 0.1327 L22: 0.4977 REMARK 3 L33: 0.1703 L12: 0.0889 REMARK 3 L13: 0.1027 L23: 0.3263 REMARK 3 S TENSOR REMARK 3 S11: -0.4457 S12: 0.6302 S13: 0.1012 REMARK 3 S21: 0.0364 S22: 0.5504 S23: 0.0229 REMARK 3 S31: 0.2295 S32: 0.2373 S33: -0.0219 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 33 THROUGH 300 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.2278 81.2950 1.4003 REMARK 3 T TENSOR REMARK 3 T11: 0.3065 T22: 0.3086 REMARK 3 T33: 0.3392 T12: 0.0175 REMARK 3 T13: -0.0242 T23: -0.0052 REMARK 3 L TENSOR REMARK 3 L11: 0.4773 L22: 1.3253 REMARK 3 L33: 2.3521 L12: -0.1906 REMARK 3 L13: 0.3031 L23: -0.5824 REMARK 3 S TENSOR REMARK 3 S11: 0.0559 S12: -0.0851 S13: 0.0053 REMARK 3 S21: -0.0131 S22: 0.0239 S23: 0.1896 REMARK 3 S31: 0.1433 S32: -0.2293 S33: 0.0010 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 301 THROUGH 396 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.8408 58.7825 -3.8733 REMARK 3 T TENSOR REMARK 3 T11: 0.5318 T22: 0.3872 REMARK 3 T33: 0.3080 T12: -0.0523 REMARK 3 T13: -0.0473 T23: -0.0070 REMARK 3 L TENSOR REMARK 3 L11: 0.4720 L22: 1.0498 REMARK 3 L33: 1.1820 L12: 0.2801 REMARK 3 L13: -0.3862 L23: 0.5648 REMARK 3 S TENSOR REMARK 3 S11: -0.0017 S12: -0.0574 S13: -0.0754 REMARK 3 S21: 0.1068 S22: 0.0133 S23: 0.1033 REMARK 3 S31: 0.1534 S32: 0.2412 S33: 0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID -2 THROUGH 22 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.6209 103.2750 2.4314 REMARK 3 T TENSOR REMARK 3 T11: 0.7282 T22: 0.6264 REMARK 3 T33: 0.5491 T12: 0.0303 REMARK 3 T13: 0.0518 T23: 0.0538 REMARK 3 L TENSOR REMARK 3 L11: 0.2931 L22: 0.1202 REMARK 3 L33: 0.0821 L12: 0.0891 REMARK 3 L13: -0.0126 L23: -0.1210 REMARK 3 S TENSOR REMARK 3 S11: -0.2135 S12: 0.1295 S13: 0.3575 REMARK 3 S21: 0.2314 S22: 0.3378 S23: 0.0192 REMARK 3 S31: 0.0762 S32: -0.6422 S33: 0.0002 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 23 THROUGH 46 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.0053 108.5504 -22.8202 REMARK 3 T TENSOR REMARK 3 T11: 0.4321 T22: 0.4132 REMARK 3 T33: 0.4120 T12: 0.0129 REMARK 3 T13: -0.0102 T23: 0.0670 REMARK 3 L TENSOR REMARK 3 L11: 0.0072 L22: 0.1369 REMARK 3 L33: 0.1062 L12: -0.0192 REMARK 3 L13: -0.0218 L23: -0.0850 REMARK 3 S TENSOR REMARK 3 S11: 0.3169 S12: -0.0831 S13: -0.2069 REMARK 3 S21: -0.0223 S22: -0.1417 S23: -0.0735 REMARK 3 S31: 0.3541 S32: -0.1642 S33: -0.0001 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 47 THROUGH 243 ) REMARK 3 ORIGIN FOR THE GROUP (A): 48.6199 102.7949 -11.4261 REMARK 3 T TENSOR REMARK 3 T11: 0.2944 T22: 0.4280 REMARK 3 T33: 0.5150 T12: -0.0114 REMARK 3 T13: -0.0604 T23: 0.1491 REMARK 3 L TENSOR REMARK 3 L11: 0.8479 L22: 1.7079 REMARK 3 L33: 1.5850 L12: -0.1230 REMARK 3 L13: 0.3009 L23: -0.4281 REMARK 3 S TENSOR REMARK 3 S11: -0.0381 S12: 0.0682 S13: 0.1651 REMARK 3 S21: 0.0293 S22: -0.3021 S23: -0.4604 REMARK 3 S31: -0.1284 S32: 0.4495 S33: -0.1545 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 244 THROUGH 300 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.5785 90.1397 -13.1545 REMARK 3 T TENSOR REMARK 3 T11: 0.3736 T22: 0.4273 REMARK 3 T33: 0.4146 T12: 0.0965 REMARK 3 T13: -0.0020 T23: 0.1079 REMARK 3 L TENSOR REMARK 3 L11: 0.1553 L22: 0.5213 REMARK 3 L33: 0.2746 L12: -0.0097 REMARK 3 L13: 0.1982 L23: -0.1208 REMARK 3 S TENSOR REMARK 3 S11: 0.0743 S12: 0.0665 S13: 0.0759 REMARK 3 S21: -0.2039 S22: -0.2869 S23: -0.2912 REMARK 3 S31: 0.2489 S32: 0.2356 S33: -0.0253 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 301 THROUGH 331 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.7453 110.9405 -30.2631 REMARK 3 T TENSOR REMARK 3 T11: 0.4992 T22: 0.4449 REMARK 3 T33: 0.4420 T12: 0.0527 REMARK 3 T13: 0.0414 T23: 0.1270 REMARK 3 L TENSOR REMARK 3 L11: 0.1566 L22: 0.1106 REMARK 3 L33: 0.2877 L12: -0.1520 REMARK 3 L13: -0.2123 L23: 0.1080 REMARK 3 S TENSOR REMARK 3 S11: 0.1869 S12: 0.0703 S13: 0.3083 REMARK 3 S21: -0.6147 S22: -0.2923 S23: -0.5139 REMARK 3 S31: 0.0557 S32: 0.2364 S33: -0.0405 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 332 THROUGH 396 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.0252 121.5322 -17.7170 REMARK 3 T TENSOR REMARK 3 T11: 0.4364 T22: 0.4136 REMARK 3 T33: 0.4518 T12: -0.0173 REMARK 3 T13: -0.0440 T23: 0.0566 REMARK 3 L TENSOR REMARK 3 L11: 0.4335 L22: 0.7197 REMARK 3 L33: 0.3113 L12: 0.2695 REMARK 3 L13: -0.1156 L23: -0.2220 REMARK 3 S TENSOR REMARK 3 S11: 0.1284 S12: -0.1583 S13: 0.1768 REMARK 3 S21: 0.2455 S22: -0.2360 S23: -0.1404 REMARK 3 S31: 0.1358 S32: -0.2531 S33: -0.0001 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8E9P COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-AUG-22. REMARK 100 THE DEPOSITION ID IS D_1000268068. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JUN-21 REMARK 200 TEMPERATURE (KELVIN) : 278 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : DIALS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 57093 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.080 REMARK 200 RESOLUTION RANGE LOW (A) : 62.510 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 10.50 REMARK 200 R MERGE (I) : 0.20000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.09 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.13 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1X28 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.78 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.72 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: HEPES, AMMONIUM SULFATE, PEG 400, REMARK 280 MALEATE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 40.78500 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 40.78500 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 40.78500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8250 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28770 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -68.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -9 REMARK 465 ALA A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 MET B -9 REMARK 465 ALA B -8 REMARK 465 HIS B -7 REMARK 465 HIS B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 3 CG CD OE1 OE2 REMARK 470 LEU A 19 CG CD1 CD2 REMARK 470 ARG A 21 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 85 CG CD CE NZ REMARK 470 LYS A 121 CG CD CE NZ REMARK 470 LYS A 236 CG CD CE NZ REMARK 470 LYS A 355 CG CD CE NZ REMARK 470 ARG B 21 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 73 CG CD OE1 OE2 REMARK 470 ARG B 76 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 85 CG CD CE NZ REMARK 470 LYS B 93 CG CD CE NZ REMARK 470 LYS B 121 CG CD CE NZ REMARK 470 GLU B 153 CG CD OE1 OE2 REMARK 470 LYS B 236 CG CD CE NZ REMARK 470 LYS B 343 CG CD CE NZ REMARK 470 LYS B 355 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH22 ARG A 336 O HOH A 505 1.59 REMARK 500 O HOH A 511 O HOH A 560 2.08 REMARK 500 OG1 THR A 43 O HOH A 501 2.14 REMARK 500 O4 SO4 A 402 O HOH A 502 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 4 41.11 -98.70 REMARK 500 THR A 43 77.15 -112.43 REMARK 500 TYR A 149 -52.10 -150.20 REMARK 500 ALA A 218 -74.35 -93.66 REMARK 500 ARG A 254 73.67 59.81 REMARK 500 ASN A 282 -74.74 -109.65 REMARK 500 SER A 284 -63.90 80.42 REMARK 500 SER A 351 -71.94 -65.44 REMARK 500 THR B 43 78.92 -113.75 REMARK 500 TYR B 149 -53.07 -149.87 REMARK 500 MET B 234 -25.73 -152.43 REMARK 500 ARG B 254 75.25 55.53 REMARK 500 ASN B 282 -76.43 -107.94 REMARK 500 SER B 284 -66.00 78.08 REMARK 500 ASN B 335 32.70 -82.89 REMARK 500 ASN B 335 -59.96 66.95 REMARK 500 REMARK 500 REMARK: NULL DBREF 8E9P A 2 396 UNP P00509 AAT_ECOLI 2 396 DBREF 8E9P B 2 396 UNP P00509 AAT_ECOLI 2 396 SEQADV 8E9P MET A -9 UNP P00509 INITIATING METHIONINE SEQADV 8E9P ALA A -8 UNP P00509 EXPRESSION TAG SEQADV 8E9P HIS A -7 UNP P00509 EXPRESSION TAG SEQADV 8E9P HIS A -6 UNP P00509 EXPRESSION TAG SEQADV 8E9P HIS A -5 UNP P00509 EXPRESSION TAG SEQADV 8E9P HIS A -4 UNP P00509 EXPRESSION TAG SEQADV 8E9P HIS A -3 UNP P00509 EXPRESSION TAG SEQADV 8E9P HIS A -2 UNP P00509 EXPRESSION TAG SEQADV 8E9P VAL A -1 UNP P00509 EXPRESSION TAG SEQADV 8E9P GLY A 0 UNP P00509 EXPRESSION TAG SEQADV 8E9P THR A 1 UNP P00509 EXPRESSION TAG SEQADV 8E9P MET B -9 UNP P00509 INITIATING METHIONINE SEQADV 8E9P ALA B -8 UNP P00509 EXPRESSION TAG SEQADV 8E9P HIS B -7 UNP P00509 EXPRESSION TAG SEQADV 8E9P HIS B -6 UNP P00509 EXPRESSION TAG SEQADV 8E9P HIS B -5 UNP P00509 EXPRESSION TAG SEQADV 8E9P HIS B -4 UNP P00509 EXPRESSION TAG SEQADV 8E9P HIS B -3 UNP P00509 EXPRESSION TAG SEQADV 8E9P HIS B -2 UNP P00509 EXPRESSION TAG SEQADV 8E9P VAL B -1 UNP P00509 EXPRESSION TAG SEQADV 8E9P GLY B 0 UNP P00509 EXPRESSION TAG SEQADV 8E9P THR B 1 UNP P00509 EXPRESSION TAG SEQRES 1 A 406 MET ALA HIS HIS HIS HIS HIS HIS VAL GLY THR PHE GLU SEQRES 2 A 406 ASN ILE THR ALA ALA PRO ALA ASP PRO ILE LEU GLY LEU SEQRES 3 A 406 ALA ASP LEU PHE ARG ALA ASP GLU ARG PRO GLY LYS ILE SEQRES 4 A 406 ASN LEU GLY ILE GLY VAL TYR LYS ASP GLU THR GLY LYS SEQRES 5 A 406 THR PRO VAL LEU THR SER VAL LYS LYS ALA GLU GLN TYR SEQRES 6 A 406 LEU LEU GLU ASN GLU THR THR LYS ASN TYR LEU GLY ILE SEQRES 7 A 406 ASP GLY ILE PRO GLU PHE GLY ARG CYS THR GLN GLU LEU SEQRES 8 A 406 LEU PHE GLY LYS GLY SER ALA LEU ILE ASN ASP LYS ARG SEQRES 9 A 406 ALA ARG THR ALA GLN THR PRO GLY GLY THR GLY ALA LEU SEQRES 10 A 406 ARG VAL ALA ALA ASP PHE LEU ALA LYS ASN THR SER VAL SEQRES 11 A 406 LYS ARG VAL TRP VAL SER ASN PRO SER TRP PRO ASN HIS SEQRES 12 A 406 LYS SER VAL PHE ASN SER ALA GLY LEU GLU VAL ARG GLU SEQRES 13 A 406 TYR ALA TYR TYR ASP ALA GLU ASN HIS THR LEU ASP PHE SEQRES 14 A 406 ASP ALA LEU ILE ASN SER LEU ASN GLU ALA GLN ALA GLY SEQRES 15 A 406 ASP VAL VAL LEU PHE HIS GLY CYS CYS HIS ASN PRO THR SEQRES 16 A 406 GLY ILE ASP PRO THR LEU GLU GLN TRP GLN THR LEU ALA SEQRES 17 A 406 GLN LEU SER VAL GLU LYS GLY TRP LEU PRO LEU PHE ASP SEQRES 18 A 406 PHE ALA TYR GLN GLY PHE ALA ARG GLY LEU GLU GLU ASP SEQRES 19 A 406 ALA GLU GLY LEU ARG ALA PHE ALA ALA MET HIS LYS GLU SEQRES 20 A 406 LEU ILE VAL ALA SER SER TYR SER LYS ASN PHE GLY LEU SEQRES 21 A 406 TYR ASN GLU ARG VAL GLY ALA CYS THR LEU VAL ALA ALA SEQRES 22 A 406 ASP SER GLU THR VAL ASP ARG ALA PHE SER GLN MET LYS SEQRES 23 A 406 ALA ALA ILE ARG ALA ASN TYR SER ASN PRO PRO ALA HIS SEQRES 24 A 406 GLY ALA SER VAL VAL ALA THR ILE LEU SER ASN ASP ALA SEQRES 25 A 406 LEU ARG ALA ILE TRP GLU GLN GLU LEU THR ASP MET ARG SEQRES 26 A 406 GLN ARG ILE GLN ARG MET ARG GLN LEU PHE VAL ASN THR SEQRES 27 A 406 LEU GLN GLU LYS GLY ALA ASN ARG ASP PHE SER PHE ILE SEQRES 28 A 406 ILE LYS GLN ASN GLY MET PHE SER PHE SER GLY LEU THR SEQRES 29 A 406 LYS GLU GLN VAL LEU ARG LEU ARG GLU GLU PHE GLY VAL SEQRES 30 A 406 TYR ALA VAL ALA SER GLY ARG VAL ASN VAL ALA GLY MET SEQRES 31 A 406 THR PRO ASP ASN MET ALA PRO LEU CYS GLU ALA ILE VAL SEQRES 32 A 406 ALA VAL LEU SEQRES 1 B 406 MET ALA HIS HIS HIS HIS HIS HIS VAL GLY THR PHE GLU SEQRES 2 B 406 ASN ILE THR ALA ALA PRO ALA ASP PRO ILE LEU GLY LEU SEQRES 3 B 406 ALA ASP LEU PHE ARG ALA ASP GLU ARG PRO GLY LYS ILE SEQRES 4 B 406 ASN LEU GLY ILE GLY VAL TYR LYS ASP GLU THR GLY LYS SEQRES 5 B 406 THR PRO VAL LEU THR SER VAL LYS LYS ALA GLU GLN TYR SEQRES 6 B 406 LEU LEU GLU ASN GLU THR THR LYS ASN TYR LEU GLY ILE SEQRES 7 B 406 ASP GLY ILE PRO GLU PHE GLY ARG CYS THR GLN GLU LEU SEQRES 8 B 406 LEU PHE GLY LYS GLY SER ALA LEU ILE ASN ASP LYS ARG SEQRES 9 B 406 ALA ARG THR ALA GLN THR PRO GLY GLY THR GLY ALA LEU SEQRES 10 B 406 ARG VAL ALA ALA ASP PHE LEU ALA LYS ASN THR SER VAL SEQRES 11 B 406 LYS ARG VAL TRP VAL SER ASN PRO SER TRP PRO ASN HIS SEQRES 12 B 406 LYS SER VAL PHE ASN SER ALA GLY LEU GLU VAL ARG GLU SEQRES 13 B 406 TYR ALA TYR TYR ASP ALA GLU ASN HIS THR LEU ASP PHE SEQRES 14 B 406 ASP ALA LEU ILE ASN SER LEU ASN GLU ALA GLN ALA GLY SEQRES 15 B 406 ASP VAL VAL LEU PHE HIS GLY CYS CYS HIS ASN PRO THR SEQRES 16 B 406 GLY ILE ASP PRO THR LEU GLU GLN TRP GLN THR LEU ALA SEQRES 17 B 406 GLN LEU SER VAL GLU LYS GLY TRP LEU PRO LEU PHE ASP SEQRES 18 B 406 PHE ALA TYR GLN GLY PHE ALA ARG GLY LEU GLU GLU ASP SEQRES 19 B 406 ALA GLU GLY LEU ARG ALA PHE ALA ALA MET HIS LYS GLU SEQRES 20 B 406 LEU ILE VAL ALA SER SER TYR SER LYS ASN PHE GLY LEU SEQRES 21 B 406 TYR ASN GLU ARG VAL GLY ALA CYS THR LEU VAL ALA ALA SEQRES 22 B 406 ASP SER GLU THR VAL ASP ARG ALA PHE SER GLN MET LYS SEQRES 23 B 406 ALA ALA ILE ARG ALA ASN TYR SER ASN PRO PRO ALA HIS SEQRES 24 B 406 GLY ALA SER VAL VAL ALA THR ILE LEU SER ASN ASP ALA SEQRES 25 B 406 LEU ARG ALA ILE TRP GLU GLN GLU LEU THR ASP MET ARG SEQRES 26 B 406 GLN ARG ILE GLN ARG MET ARG GLN LEU PHE VAL ASN THR SEQRES 27 B 406 LEU GLN GLU LYS GLY ALA ASN ARG ASP PHE SER PHE ILE SEQRES 28 B 406 ILE LYS GLN ASN GLY MET PHE SER PHE SER GLY LEU THR SEQRES 29 B 406 LYS GLU GLN VAL LEU ARG LEU ARG GLU GLU PHE GLY VAL SEQRES 30 B 406 TYR ALA VAL ALA SER GLY ARG VAL ASN VAL ALA GLY MET SEQRES 31 B 406 THR PRO ASP ASN MET ALA PRO LEU CYS GLU ALA ILE VAL SEQRES 32 B 406 ALA VAL LEU HET PLP A 401 22 HET SO4 A 402 5 HET SO4 B 401 5 HET PLP B 402 23 HETNAM PLP PYRIDOXAL-5'-PHOSPHATE HETNAM SO4 SULFATE ION HETSYN PLP VITAMIN B6 PHOSPHATE FORMUL 3 PLP 2(C8 H10 N O6 P) FORMUL 4 SO4 2(O4 S 2-) FORMUL 7 HOH *183(H2 O) HELIX 1 AA1 ASP A 11 ASP A 23 1 13 HELIX 2 AA2 LEU A 46 GLU A 60 1 15 HELIX 3 AA3 ILE A 71 GLY A 84 1 14 HELIX 4 AA4 SER A 87 ASP A 92 1 6 HELIX 5 AA5 PRO A 101 THR A 118 1 18 HELIX 6 AA6 PRO A 131 ALA A 140 1 10 HELIX 7 AA7 ASP A 158 LEU A 166 1 9 HELIX 8 AA8 THR A 190 GLY A 205 1 16 HELIX 9 AA9 GLU A 222 ASP A 224 5 3 HELIX 10 AB1 ALA A 225 HIS A 235 1 11 HELIX 11 AB2 LEU A 250 ARG A 254 5 5 HELIX 12 AB3 ASP A 264 ALA A 281 1 18 HELIX 13 AB4 PRO A 287 ASN A 300 1 14 HELIX 14 AB5 ASN A 300 LYS A 332 1 33 HELIX 15 AB6 SER A 339 GLN A 344 1 6 HELIX 16 AB7 THR A 354 GLY A 366 1 13 HELIX 17 AB8 ALA A 378 MET A 380 5 3 HELIX 18 AB9 ASN A 384 LEU A 396 1 13 HELIX 19 AC1 ILE B 13 ASP B 23 1 11 HELIX 20 AC2 LEU B 46 GLU B 60 1 15 HELIX 21 AC3 ILE B 71 GLY B 84 1 14 HELIX 22 AC4 SER B 87 ASP B 92 1 6 HELIX 23 AC5 PRO B 101 THR B 118 1 18 HELIX 24 AC6 PRO B 131 ALA B 140 1 10 HELIX 25 AC7 ASP B 158 LEU B 166 1 9 HELIX 26 AC8 ASN B 167 ALA B 169 5 3 HELIX 27 AC9 THR B 190 GLY B 205 1 16 HELIX 28 AD1 GLY B 220 ALA B 225 1 6 HELIX 29 AD2 ALA B 225 ALA B 233 1 9 HELIX 30 AD3 LEU B 250 ARG B 254 5 5 HELIX 31 AD4 ASP B 264 ALA B 281 1 18 HELIX 32 AD5 PRO B 287 SER B 299 1 13 HELIX 33 AD6 ASN B 300 LYS B 332 1 33 HELIX 34 AD7 PHE B 338 GLN B 344 5 7 HELIX 35 AD8 THR B 354 GLY B 366 1 13 HELIX 36 AD9 ALA B 378 MET B 380 5 3 HELIX 37 AE1 ASN B 384 LEU B 396 1 13 SHEET 1 AA1 2 ILE A 29 ASN A 30 0 SHEET 2 AA1 2 VAL A 367 TYR A 368 1 O TYR A 368 N ILE A 29 SHEET 1 AA2 7 ALA A 95 THR A 100 0 SHEET 2 AA2 7 GLY A 256 VAL A 261 -1 O LEU A 260 N ARG A 96 SHEET 3 AA2 7 LEU A 238 SER A 243 -1 N VAL A 240 O THR A 259 SHEET 4 AA2 7 LEU A 207 PHE A 212 1 N PHE A 210 O ALA A 241 SHEET 5 AA2 7 VAL A 174 HIS A 178 1 N PHE A 177 O ASP A 211 SHEET 6 AA2 7 ARG A 122 ASN A 127 1 N TRP A 124 O LEU A 176 SHEET 7 AA2 7 GLU A 143 ALA A 148 1 O ARG A 145 N VAL A 125 SHEET 1 AA3 2 TYR A 150 ASP A 151 0 SHEET 2 AA3 2 THR A 156 LEU A 157 -1 O THR A 156 N ASP A 151 SHEET 1 AA4 2 PHE A 348 PHE A 350 0 SHEET 2 AA4 2 ARG A 374 ASN A 376 -1 O VAL A 375 N SER A 349 SHEET 1 AA5 2 ILE B 29 ASN B 30 0 SHEET 2 AA5 2 VAL B 367 TYR B 368 1 O TYR B 368 N ILE B 29 SHEET 1 AA6 7 ALA B 95 THR B 100 0 SHEET 2 AA6 7 GLY B 256 VAL B 261 -1 O LEU B 260 N ARG B 96 SHEET 3 AA6 7 LEU B 238 SER B 243 -1 N VAL B 240 O THR B 259 SHEET 4 AA6 7 LEU B 207 PHE B 212 1 N PHE B 212 O ALA B 241 SHEET 5 AA6 7 VAL B 174 HIS B 178 1 N PHE B 177 O LEU B 209 SHEET 6 AA6 7 ARG B 122 ASN B 127 1 N TRP B 124 O LEU B 176 SHEET 7 AA6 7 GLU B 143 ALA B 148 1 O ARG B 145 N VAL B 123 SHEET 1 AA7 2 TYR B 150 ASP B 151 0 SHEET 2 AA7 2 THR B 156 LEU B 157 -1 O THR B 156 N ASP B 151 SHEET 1 AA8 2 PHE B 348 PHE B 350 0 SHEET 2 AA8 2 ARG B 374 ASN B 376 -1 O VAL B 375 N SER B 349 LINK NZ LYS A 246 C4A PLP A 401 1555 1555 1.59 CISPEP 1 ASN A 127 PRO A 128 0 1.87 CISPEP 2 ASN A 183 PRO A 184 0 9.21 CISPEP 3 ASN B 127 PRO B 128 0 0.68 CISPEP 4 ASN B 183 PRO B 184 0 9.51 CRYST1 143.830 143.830 81.570 90.00 90.00 120.00 P 63 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006953 0.004014 0.000000 0.00000 SCALE2 0.000000 0.008028 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012259 0.00000