HEADER IMMUNOSUPPRESSANT/INHIBITOR 28-AUG-22 8EAA TITLE NKG2D COMPLEXED WITH INHIBITOR 4E COMPND MOL_ID: 1; COMPND 2 MOLECULE: NKG2-D TYPE II INTEGRAL MEMBRANE PROTEIN; COMPND 3 CHAIN: B, A; COMPND 4 SYNONYM: KILLER CELL LECTIN-LIKE RECEPTOR SUBFAMILY K MEMBER 1,NK COMPND 5 CELL RECEPTOR D,NKG2-D-ACTIVATING NK RECEPTOR; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: KLRK1, D12S2489E, NKG2D; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NKG2D, IMMUNE SYSTEM, IMMUNOSUPPRESSANT, IMMUNOSUPPRESSANT-INHIBITOR KEYWDS 2 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.A.THOMPSON,J.C.GRANT,N.K.KARPOWICH,S.SHARMA REVDAT 3 25-OCT-23 8EAA 1 REMARK REVDAT 2 10-MAY-23 8EAA 1 JRNL REVDAT 1 03-MAY-23 8EAA 0 JRNL AUTH A.A.THOMPSON,M.B.HARBUT,P.P.KUNG,N.K.KARPOWICH,J.D.BRANSON, JRNL AUTH 2 J.C.GRANT,D.HAGAN,H.A.PASCUAL,G.BAI,R.B.ZAVAREH,H.R.COATE, JRNL AUTH 3 B.C.COLLINS,M.COTE,C.F.GELIN,K.L.DAMM-GANAMET,H.GHOLAMI, JRNL AUTH 4 A.R.HUFF,L.LIMON,K.J.LUMB,P.A.MAK,K.M.NAKAFUKU,E.V.PRICE, JRNL AUTH 5 A.Y.SHIH,M.TOOTOONCHI,N.A.VELLORE,J.WANG,N.WEI,J.ZIFF, JRNL AUTH 6 S.B.BERGER,J.P.EDWARDS,A.GARDET,S.SUN,J.E.TOWNE,J.D.VENABLE, JRNL AUTH 7 Z.SHI,H.VENKATESAN,M.L.RIVES,S.SHARMA,B.T.SHIREMAN,S.J.ALLEN JRNL TITL IDENTIFICATION OF SMALL-MOLECULE PROTEIN-PROTEIN INTERACTION JRNL TITL 2 INHIBITORS FOR NKG2D. JRNL REF PROC.NATL.ACAD.SCI.USA V. 120 42120 2023 JRNL REFN ESSN 1091-6490 JRNL PMID 37098070 JRNL DOI 10.1073/PNAS.2216342120 REMARK 2 REMARK 2 RESOLUTION. 1.57 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.17.1_3660: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.57 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.03 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.380 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 3 NUMBER OF REFLECTIONS : 37714 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.204 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.160 REMARK 3 FREE R VALUE TEST SET COUNT : 1947 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 32.0300 - 3.7800 1.00 2727 149 0.1614 0.1940 REMARK 3 2 3.7800 - 3.0000 1.00 2640 145 0.1754 0.2243 REMARK 3 3 3.0000 - 2.6200 1.00 2634 145 0.1860 0.2252 REMARK 3 4 2.6200 - 2.3800 1.00 2618 137 0.1737 0.1842 REMARK 3 5 2.3800 - 2.2100 1.00 2628 152 0.1769 0.1824 REMARK 3 6 2.2100 - 2.0800 1.00 2629 123 0.1643 0.2034 REMARK 3 7 2.0800 - 1.9800 1.00 2622 137 0.1716 0.1923 REMARK 3 8 1.9800 - 1.8900 1.00 2586 159 0.1720 0.2056 REMARK 3 9 1.8900 - 1.8200 1.00 2565 145 0.1750 0.2065 REMARK 3 10 1.8200 - 1.7600 1.00 2642 141 0.1713 0.1950 REMARK 3 11 1.7600 - 1.7000 1.00 2577 151 0.1740 0.2208 REMARK 3 12 1.7000 - 1.6500 0.97 2554 139 0.1624 0.1842 REMARK 3 13 1.6500 - 1.6100 0.88 2276 120 0.1753 0.2410 REMARK 3 14 1.6100 - 1.5700 0.78 2069 104 0.1847 0.2068 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.140 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.620 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 13.48 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 2094 REMARK 3 ANGLE : 0.899 2838 REMARK 3 CHIRALITY : 0.089 283 REMARK 3 PLANARITY : 0.005 364 REMARK 3 DIHEDRAL : 6.363 278 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 91 THROUGH 114 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.5918 -11.3299 10.2647 REMARK 3 T TENSOR REMARK 3 T11: 0.1441 T22: 0.1359 REMARK 3 T33: 0.1056 T12: 0.0051 REMARK 3 T13: 0.0096 T23: -0.0019 REMARK 3 L TENSOR REMARK 3 L11: 0.7690 L22: 1.8004 REMARK 3 L33: 1.5439 L12: 0.1992 REMARK 3 L13: 0.8858 L23: -0.7315 REMARK 3 S TENSOR REMARK 3 S11: -0.0117 S12: 0.0882 S13: 0.1978 REMARK 3 S21: -0.0206 S22: -0.0539 S23: -0.0291 REMARK 3 S31: -0.1996 S32: 0.1666 S33: 0.0126 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 115 THROUGH 156 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.3218 -22.9066 16.1125 REMARK 3 T TENSOR REMARK 3 T11: 0.1068 T22: 0.1158 REMARK 3 T33: 0.0885 T12: -0.0019 REMARK 3 T13: -0.0051 T23: -0.0151 REMARK 3 L TENSOR REMARK 3 L11: 2.3004 L22: 2.1714 REMARK 3 L33: 1.6423 L12: 0.2095 REMARK 3 L13: -0.4669 L23: -0.5432 REMARK 3 S TENSOR REMARK 3 S11: -0.0326 S12: -0.0511 S13: -0.1041 REMARK 3 S21: -0.0680 S22: 0.0286 S23: 0.0286 REMARK 3 S31: -0.0183 S32: -0.0874 S33: 0.0073 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 157 THROUGH 179 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.6237 -33.6492 8.5345 REMARK 3 T TENSOR REMARK 3 T11: 0.2817 T22: 0.2344 REMARK 3 T33: 0.2577 T12: -0.0573 REMARK 3 T13: -0.0352 T23: -0.0910 REMARK 3 L TENSOR REMARK 3 L11: 2.5755 L22: 2.8860 REMARK 3 L33: 3.4157 L12: -0.2020 REMARK 3 L13: 1.0038 L23: 0.2961 REMARK 3 S TENSOR REMARK 3 S11: -0.1306 S12: 0.7438 S13: -0.7105 REMARK 3 S21: -0.4832 S22: 0.0055 S23: 0.3973 REMARK 3 S31: 0.4599 S32: -0.2991 S33: -0.0299 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 180 THROUGH 216 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.3395 -29.6537 18.0948 REMARK 3 T TENSOR REMARK 3 T11: 0.1166 T22: 0.1341 REMARK 3 T33: 0.1380 T12: -0.0028 REMARK 3 T13: -0.0029 T23: -0.0115 REMARK 3 L TENSOR REMARK 3 L11: 1.6238 L22: 2.2891 REMARK 3 L33: 1.0765 L12: -0.3206 REMARK 3 L13: -0.3230 L23: 0.3912 REMARK 3 S TENSOR REMARK 3 S11: -0.0155 S12: 0.0315 S13: -0.1799 REMARK 3 S21: -0.0869 S22: 0.0116 S23: -0.0647 REMARK 3 S31: 0.0730 S32: -0.0055 S33: -0.0085 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 93 THROUGH 103 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.8228 -7.2962 6.6866 REMARK 3 T TENSOR REMARK 3 T11: 0.1933 T22: 0.1743 REMARK 3 T33: 0.1448 T12: -0.0190 REMARK 3 T13: -0.0127 T23: -0.0149 REMARK 3 L TENSOR REMARK 3 L11: 3.6298 L22: 3.0925 REMARK 3 L33: 2.7632 L12: -0.0359 REMARK 3 L13: 1.8370 L23: -0.2115 REMARK 3 S TENSOR REMARK 3 S11: -0.0459 S12: 0.1842 S13: -0.1018 REMARK 3 S21: -0.4908 S22: 0.1527 S23: 0.1342 REMARK 3 S31: -0.2181 S32: 0.1366 S33: -0.0819 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 104 THROUGH 114 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.8760 -8.5966 14.0303 REMARK 3 T TENSOR REMARK 3 T11: 0.1538 T22: 0.1492 REMARK 3 T33: 0.1095 T12: -0.0031 REMARK 3 T13: 0.0034 T23: -0.0035 REMARK 3 L TENSOR REMARK 3 L11: 3.5993 L22: 2.7699 REMARK 3 L33: 1.9618 L12: -0.8968 REMARK 3 L13: 1.3626 L23: 0.0857 REMARK 3 S TENSOR REMARK 3 S11: 0.0031 S12: 0.1561 S13: -0.0533 REMARK 3 S21: -0.0475 S22: -0.0487 S23: 0.0287 REMARK 3 S31: -0.0505 S32: -0.0021 S33: 0.0643 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 115 THROUGH 130 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.5080 -11.0750 16.2729 REMARK 3 T TENSOR REMARK 3 T11: 0.1264 T22: 0.2321 REMARK 3 T33: 0.1949 T12: -0.0100 REMARK 3 T13: 0.0280 T23: -0.0564 REMARK 3 L TENSOR REMARK 3 L11: 2.9068 L22: 1.0723 REMARK 3 L33: 3.1203 L12: 0.8926 REMARK 3 L13: 1.8261 L23: 0.7399 REMARK 3 S TENSOR REMARK 3 S11: 0.0285 S12: 0.6285 S13: -0.4526 REMARK 3 S21: -0.1438 S22: 0.1157 S23: -0.1694 REMARK 3 S31: 0.0568 S32: 0.1855 S33: -0.0493 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 131 THROUGH 156 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.2024 -7.0051 22.2226 REMARK 3 T TENSOR REMARK 3 T11: 0.1282 T22: 0.1049 REMARK 3 T33: 0.1152 T12: -0.0065 REMARK 3 T13: 0.0049 T23: -0.0049 REMARK 3 L TENSOR REMARK 3 L11: 2.6630 L22: 1.3968 REMARK 3 L33: 1.3692 L12: 0.0869 REMARK 3 L13: 0.5213 L23: 0.4442 REMARK 3 S TENSOR REMARK 3 S11: -0.0712 S12: 0.0660 S13: -0.1067 REMARK 3 S21: -0.0479 S22: -0.0240 S23: 0.0456 REMARK 3 S31: -0.0864 S32: -0.0627 S33: 0.0533 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 157 THROUGH 168 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.4505 1.8065 27.8702 REMARK 3 T TENSOR REMARK 3 T11: 0.3379 T22: 0.2044 REMARK 3 T33: 0.2673 T12: -0.0566 REMARK 3 T13: -0.0832 T23: -0.0335 REMARK 3 L TENSOR REMARK 3 L11: 3.3522 L22: 2.0128 REMARK 3 L33: 3.1519 L12: 0.6007 REMARK 3 L13: 0.9945 L23: 1.9503 REMARK 3 S TENSOR REMARK 3 S11: -0.2243 S12: -0.2737 S13: 0.9871 REMARK 3 S21: 0.6017 S22: 0.0948 S23: -0.4237 REMARK 3 S31: -0.8246 S32: 0.3860 S33: -0.0139 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 169 THROUGH 188 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.0690 -1.7891 30.4801 REMARK 3 T TENSOR REMARK 3 T11: 0.1880 T22: 0.1446 REMARK 3 T33: 0.2081 T12: -0.0149 REMARK 3 T13: -0.0449 T23: -0.0269 REMARK 3 L TENSOR REMARK 3 L11: 2.5010 L22: 1.2978 REMARK 3 L33: 1.7238 L12: 0.5992 REMARK 3 L13: -0.0636 L23: 0.7160 REMARK 3 S TENSOR REMARK 3 S11: -0.1254 S12: -0.2440 S13: 0.1186 REMARK 3 S21: 0.0092 S22: -0.0267 S23: -0.2089 REMARK 3 S31: -0.2775 S32: 0.1661 S33: 0.0587 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 189 THROUGH 215 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.8798 -8.9385 24.2957 REMARK 3 T TENSOR REMARK 3 T11: 0.1111 T22: 0.0992 REMARK 3 T33: 0.1354 T12: -0.0052 REMARK 3 T13: -0.0035 T23: 0.0017 REMARK 3 L TENSOR REMARK 3 L11: 2.7218 L22: 0.9609 REMARK 3 L33: 1.7031 L12: 0.2142 REMARK 3 L13: 0.1223 L23: 0.6637 REMARK 3 S TENSOR REMARK 3 S11: -0.0454 S12: -0.0408 S13: -0.1191 REMARK 3 S21: -0.0625 S22: 0.0315 S23: -0.0763 REMARK 3 S31: -0.1443 S32: 0.0877 S33: 0.0664 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8EAA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-SEP-22. REMARK 100 THE DEPOSITION ID IS D_1000268065. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-JUN-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37722 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.570 REMARK 200 RESOLUTION RANGE LOW (A) : 64.350 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 200 DATA REDUNDANCY : 3.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.57 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 76.3 REMARK 200 DATA REDUNDANCY IN SHELL : 1.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1MPU REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.15 - 0.22 M NANO3 20 - 31 % (W/V) REMARK 280 PEG 3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 50.00650 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 21.66900 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 50.00650 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 21.66900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3450 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11210 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -2.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 505 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B 88 REMARK 465 GLY B 89 REMARK 465 PRO B 90 REMARK 465 THR B 162 REMARK 465 ASN B 163 REMARK 465 GLY B 164 REMARK 465 MET A 88 REMARK 465 GLY A 89 REMARK 465 PRO A 90 REMARK 465 LEU A 91 REMARK 465 THR A 92 REMARK 465 PRO A 161 REMARK 465 THR A 162 REMARK 465 ASN A 163 REMARK 465 VAL A 216 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU B 91 CG CD1 CD2 REMARK 470 GLU B 169 CD OE1 OE2 REMARK 470 LYS A 101 CG CD CE NZ REMARK 470 LYS A 186 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER B 151 -160.63 61.54 REMARK 500 MET B 184 -64.83 -151.17 REMARK 500 SER A 151 -172.91 68.26 REMARK 500 REMARK 500 REMARK: NULL DBREF 8EAA B 90 216 UNP P26718 NKG2D_HUMAN 90 216 DBREF 8EAA A 90 216 UNP P26718 NKG2D_HUMAN 90 216 SEQADV 8EAA MET B 88 UNP P26718 INITIATING METHIONINE SEQADV 8EAA GLY B 89 UNP P26718 EXPRESSION TAG SEQADV 8EAA GLU B 117 UNP P26718 SER 117 ENGINEERED MUTATION SEQADV 8EAA SER B 173 UNP P26718 ILE 173 ENGINEERED MUTATION SEQADV 8EAA MET A 88 UNP P26718 INITIATING METHIONINE SEQADV 8EAA GLY A 89 UNP P26718 EXPRESSION TAG SEQADV 8EAA GLU A 117 UNP P26718 SER 117 ENGINEERED MUTATION SEQADV 8EAA SER A 173 UNP P26718 ILE 173 ENGINEERED MUTATION SEQRES 1 B 129 MET GLY PRO LEU THR GLU SER TYR CYS GLY PRO CYS PRO SEQRES 2 B 129 LYS ASN TRP ILE CYS TYR LYS ASN ASN CYS TYR GLN PHE SEQRES 3 B 129 PHE ASP GLU GLU LYS ASN TRP TYR GLU SER GLN ALA SER SEQRES 4 B 129 CYS MET SER GLN ASN ALA SER LEU LEU LYS VAL TYR SER SEQRES 5 B 129 LYS GLU ASP GLN ASP LEU LEU LYS LEU VAL LYS SER TYR SEQRES 6 B 129 HIS TRP MET GLY LEU VAL HIS ILE PRO THR ASN GLY SER SEQRES 7 B 129 TRP GLN TRP GLU ASP GLY SER SER LEU SER PRO ASN LEU SEQRES 8 B 129 LEU THR ILE ILE GLU MET GLN LYS GLY ASP CYS ALA LEU SEQRES 9 B 129 TYR ALA SER SER PHE LYS GLY TYR ILE GLU ASN CYS SER SEQRES 10 B 129 THR PRO ASN THR TYR ILE CYS MET GLN ARG THR VAL SEQRES 1 A 129 MET GLY PRO LEU THR GLU SER TYR CYS GLY PRO CYS PRO SEQRES 2 A 129 LYS ASN TRP ILE CYS TYR LYS ASN ASN CYS TYR GLN PHE SEQRES 3 A 129 PHE ASP GLU GLU LYS ASN TRP TYR GLU SER GLN ALA SER SEQRES 4 A 129 CYS MET SER GLN ASN ALA SER LEU LEU LYS VAL TYR SER SEQRES 5 A 129 LYS GLU ASP GLN ASP LEU LEU LYS LEU VAL LYS SER TYR SEQRES 6 A 129 HIS TRP MET GLY LEU VAL HIS ILE PRO THR ASN GLY SER SEQRES 7 A 129 TRP GLN TRP GLU ASP GLY SER SER LEU SER PRO ASN LEU SEQRES 8 A 129 LEU THR ILE ILE GLU MET GLN LYS GLY ASP CYS ALA LEU SEQRES 9 A 129 TYR ALA SER SER PHE LYS GLY TYR ILE GLU ASN CYS SER SEQRES 10 A 129 THR PRO ASN THR TYR ILE CYS MET GLN ARG THR VAL HET VMW B 301 36 HET PEG A 301 7 HET PEG A 302 7 HET GOL A 303 6 HETNAM VMW N-{(1S)-2-(DIMETHYLAMINO)-1-[3-METHYL-5- HETNAM 2 VMW (TRIFLUOROMETHYL)PHENYL]-2-OXOETHYL}-4-[4- HETNAM 3 VMW (TRIFLUOROMETHYL)PHENYL]PYRIDINE-3-CARBOXAMIDE HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 VMW C25 H21 F6 N3 O2 FORMUL 4 PEG 2(C4 H10 O3) FORMUL 6 GOL C3 H8 O3 FORMUL 7 HOH *210(H2 O) HELIX 1 AA1 ASN B 119 GLN B 130 1 12 HELIX 2 AA2 GLN B 143 VAL B 149 5 7 HELIX 3 AA3 ASN A 119 GLN A 130 1 12 HELIX 4 AA4 GLN A 143 VAL A 149 5 7 SHEET 1 AA1 2 GLU B 93 CYS B 99 0 SHEET 2 AA1 2 SER A 94 PRO A 100 -1 O SER A 94 N CYS B 99 SHEET 1 AA2 5 ILE B 104 TYR B 106 0 SHEET 2 AA2 5 ASN B 109 LYS B 118 -1 O TYR B 111 N ILE B 104 SHEET 3 AA2 5 ASN B 207 ARG B 214 -1 O GLN B 213 N CYS B 110 SHEET 4 AA2 5 HIS B 153 HIS B 159 1 N TRP B 154 O THR B 208 SHEET 5 AA2 5 TRP B 166 TRP B 168 -1 O GLN B 167 N VAL B 158 SHEET 1 AA3 6 SER B 133 LEU B 134 0 SHEET 2 AA3 6 ASN B 207 ARG B 214 -1 O MET B 212 N SER B 133 SHEET 3 AA3 6 HIS B 153 HIS B 159 1 N TRP B 154 O THR B 208 SHEET 4 AA3 6 CYS B 189 ALA B 193 -1 O TYR B 192 N HIS B 153 SHEET 5 AA3 6 LYS B 197 GLU B 201 -1 O TYR B 199 N LEU B 191 SHEET 6 AA3 6 THR B 180 ILE B 182 1 N ILE B 182 O GLY B 198 SHEET 1 AA4 4 ILE A 104 TYR A 106 0 SHEET 2 AA4 4 ASN A 109 LYS A 118 -1 O TYR A 111 N ILE A 104 SHEET 3 AA4 4 ASN A 207 ARG A 214 -1 O GLN A 213 N CYS A 110 SHEET 4 AA4 4 SER A 133 LEU A 134 -1 N SER A 133 O MET A 212 SHEET 1 AA5 5 TRP A 166 TRP A 168 0 SHEET 2 AA5 5 HIS A 153 HIS A 159 -1 N VAL A 158 O GLN A 167 SHEET 3 AA5 5 CYS A 189 ALA A 193 -1 O TYR A 192 N HIS A 153 SHEET 4 AA5 5 LYS A 197 GLU A 201 -1 O LYS A 197 N ALA A 193 SHEET 5 AA5 5 THR A 180 GLU A 183 1 N ILE A 182 O GLY A 198 SSBOND 1 CYS B 96 CYS B 105 1555 1555 2.05 SSBOND 2 CYS B 99 CYS B 110 1555 1555 2.02 SSBOND 3 CYS B 127 CYS B 211 1555 1555 2.03 SSBOND 4 CYS B 189 CYS B 203 1555 1555 2.04 SSBOND 5 CYS A 96 CYS A 105 1555 1555 2.05 SSBOND 6 CYS A 99 CYS A 110 1555 1555 2.03 SSBOND 7 CYS A 127 CYS A 211 1555 1555 2.06 SSBOND 8 CYS A 189 CYS A 203 1555 1555 2.06 CISPEP 1 GLY B 97 PRO B 98 0 1.63 CISPEP 2 SER B 194 SER B 195 0 -2.18 CISPEP 3 GLY A 97 PRO A 98 0 3.30 CISPEP 4 SER A 194 SER A 195 0 -3.04 CRYST1 100.013 43.338 67.109 90.00 106.49 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009999 0.000000 0.002960 0.00000 SCALE2 0.000000 0.023074 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015540 0.00000