HEADER DNA BINDING PROTEIN/DNA 30-AUG-22 8EB5 TITLE TANDEM OF HERMES TRANSPOSASE BED DOMAIN IN COMPLEX WITH THE QUASI TITLE 2 PALINDROME OF ITS TRANSPOSON LEFT-END COMPND MOL_ID: 1; COMPND 2 MOLECULE: HERMES TRANSPOSASE BED DOMAIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: HERMES TRANSPOSON LEFT-END SUBTERMINAL REPEATS 1 AND 2; COMPND 8 CHAIN: C; COMPND 9 ENGINEERED: YES; COMPND 10 MUTATION: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: HERMES TRANSPOSON LEFT-END SUBTERMINAL REPEATS 1 AND 2; COMPND 13 CHAIN: D; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUSCA DOMESTICA; SOURCE 3 ORGANISM_COMMON: HOUSE FLY; SOURCE 4 ORGANISM_TAXID: 7370; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VARIANT: ROSETTA; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET15B; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 ORGANISM_SCIENTIFIC: MUSCA DOMESTICA; SOURCE 13 ORGANISM_TAXID: 7370; SOURCE 14 MOL_ID: 3; SOURCE 15 SYNTHETIC: YES; SOURCE 16 ORGANISM_SCIENTIFIC: MUSCA DOMESTICA; SOURCE 17 ORGANISM_TAXID: 7370 KEYWDS BED DOMAIN, ZINC-BINDING DOMAIN, TRANSPOSASE, DNA BINDING PROTEIN-DNA KEYWDS 2 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR L.LANNES,F.DYDA REVDAT 2 22-MAY-24 8EB5 1 REMARK REVDAT 1 02-AUG-23 8EB5 0 JRNL AUTH L.LANNES,C.M.FURMAN,A.B.HICKMAN,F.DYDA JRNL TITL ZINC-FINGER BED DOMAINS DRIVE THE FORMATION OF THE ACTIVE JRNL TITL 2 HERMES TRANSPOSOSOME BY ASYMMETRIC DNA BINDING. JRNL REF NAT COMMUN V. 14 4470 2023 JRNL REFN ESSN 2041-1723 JRNL PMID 37491363 JRNL DOI 10.1038/S41467-023-40210-3 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.4 (11-DEC-2020) REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.64 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 7292 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.232 REMARK 3 R VALUE (WORKING SET) : 0.231 REMARK 3 FREE R VALUE : 0.238 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.190 REMARK 3 FREE R VALUE TEST SET COUNT : 743 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 38 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.52 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 198 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.3034 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 183 REMARK 3 BIN R VALUE (WORKING SET) : 0.3017 REMARK 3 BIN FREE R VALUE : 0.3255 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 7.58 REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 601 REMARK 3 NUCLEIC ACID ATOMS : 691 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 5 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 100.2 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 98.38 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.20750 REMARK 3 B22 (A**2) : -3.20750 REMARK 3 B33 (A**2) : 6.41500 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.350 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.647 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.267 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.472 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.251 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.940 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.950 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 1425 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 2067 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 407 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 142 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 1425 ; 5.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 188 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : 4 ; 1.000 ; HARMONIC REMARK 3 UTILITY ANGLES : 4 ; 1.000 ; HARMONIC REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 686 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 0.94 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.15 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 27.63 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): 17.1944 30.1754 1.3939 REMARK 3 T TENSOR REMARK 3 T11: 0.3867 T22: -0.0194 REMARK 3 T33: -0.0833 T12: -0.1393 REMARK 3 T13: 0.0996 T23: 0.0543 REMARK 3 L TENSOR REMARK 3 L11: 6.6093 L22: 5.6090 REMARK 3 L33: 9.0815 L12: 3.3268 REMARK 3 L13: 1.3917 L23: 0.4088 REMARK 3 S TENSOR REMARK 3 S11: -0.2053 S12: 0.5767 S13: 0.7413 REMARK 3 S21: -0.7830 S22: 0.0732 S23: -0.2491 REMARK 3 S31: 0.3147 S32: 0.1640 S33: 0.1321 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { C|* } REMARK 3 ORIGIN FOR THE GROUP (A): 13.1609 24.7772 18.8006 REMARK 3 T TENSOR REMARK 3 T11: 0.1693 T22: -0.0200 REMARK 3 T33: -0.0924 T12: -0.3607 REMARK 3 T13: 0.0212 T23: -0.0609 REMARK 3 L TENSOR REMARK 3 L11: 6.0254 L22: 9.4460 REMARK 3 L33: 2.2305 L12: 1.6950 REMARK 3 L13: -2.1890 L23: -2.5553 REMARK 3 S TENSOR REMARK 3 S11: 0.4002 S12: -0.2423 S13: 0.1584 REMARK 3 S21: -0.1986 S22: -0.7625 S23: 0.7819 REMARK 3 S31: 0.0499 S32: -0.0629 S33: 0.3623 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { D|* } REMARK 3 ORIGIN FOR THE GROUP (A): 13.2450 24.5212 18.9323 REMARK 3 T TENSOR REMARK 3 T11: 0.0144 T22: -0.1620 REMARK 3 T33: 0.1160 T12: -0.3549 REMARK 3 T13: 0.0442 T23: -0.0958 REMARK 3 L TENSOR REMARK 3 L11: 4.5631 L22: 11.6649 REMARK 3 L33: 7.1753 L12: 2.1326 REMARK 3 L13: -0.9603 L23: -1.7916 REMARK 3 S TENSOR REMARK 3 S11: 0.2116 S12: -0.1952 S13: 0.3730 REMARK 3 S21: -0.6529 S22: -0.1180 S23: 0.0096 REMARK 3 S31: 0.0317 S32: -0.0260 S33: -0.0936 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8EB5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 31-AUG-22. REMARK 100 THE DEPOSITION ID IS D_1000267820. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-JUL-20 REMARK 200 TEMPERATURE (KELVIN) : 95 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.28335 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 7292 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 27.640 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 19.20 REMARK 200 R MERGE (I) : 0.04434 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 35.4700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 19.23 REMARK 200 R MERGE FOR SHELL (I) : 1.22400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.390 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: AUTOSOL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.02 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.46 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 4000, BIS-TRIS, PH 6.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 141.71533 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 70.85767 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 106.28650 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 35.42883 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 177.14417 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 141.71533 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 70.85767 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 35.42883 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 106.28650 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 177.14417 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, D REMARK 350 BIOMT1 2 0.500000 -0.866025 0.000000 27.63550 REMARK 350 BIOMT2 2 -0.866025 -0.500000 0.000000 47.86609 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 35.42883 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLN A 2 REMARK 465 LYS A 3 REMARK 465 LYS A 78 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DC C 1 O4' - C1' - N1 ANGL. DEV. = 4.0 DEGREES REMARK 500 DA C 5 O4' - C1' - N9 ANGL. DEV. = 2.6 DEGREES REMARK 500 DT C 8 O4' - C1' - N1 ANGL. DEV. = 2.4 DEGREES REMARK 500 DT C 12 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES REMARK 500 DT C 13 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES REMARK 500 DG D 7 O4' - C1' - N9 ANGL. DEV. = 2.7 DEGREES REMARK 500 DC D 8 O4' - C1' - N1 ANGL. DEV. = 1.8 DEGREES REMARK 500 DC D 9 O4' - C1' - N1 ANGL. DEV. = 2.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH D 101 DISTANCE = 30.97 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 101 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 51 SG REMARK 620 2 CYS A 54 SG 113.5 REMARK 620 3 HIS A 71 NE2 102.8 102.5 REMARK 620 4 CYS A 73 SG 109.8 123.1 102.0 REMARK 620 N 1 2 3 DBREF 8EB5 A 1 78 UNP Q25442 Q25442_MUSDO 1 78 DBREF 8EB5 C 1 17 PDB 8EB5 8EB5 1 17 DBREF 8EB5 D 1 17 PDB 8EB5 8EB5 1 17 SEQRES 1 A 78 MET GLN LYS MET ASP ASN LEU GLU VAL LYS ALA LYS ILE SEQRES 2 A 78 ASN GLN GLY LEU TYR LYS ILE THR PRO ARG HIS LYS GLY SEQRES 3 A 78 THR SER PHE ILE TRP ASN VAL LEU ALA ASP ILE GLN LYS SEQRES 4 A 78 GLU ASP ASP THR LEU VAL GLU GLY TRP VAL PHE CYS ARG SEQRES 5 A 78 LYS CYS GLU LYS VAL LEU LYS TYR THR THR ARG GLN THR SEQRES 6 A 78 SER ASN LEU CYS ARG HIS LYS CYS CYS ALA SER LEU LYS SEQRES 1 C 17 DC DA DA DC DA DA DG DT DG DG DC DT DT SEQRES 2 C 17 DA DT DT DT SEQRES 1 D 17 DA DA DA DT DA DA DG DC DC DA DC DT DT SEQRES 2 D 17 DG DT DT DG HET ZN A 101 1 HETNAM ZN ZINC ION FORMUL 4 ZN ZN 2+ FORMUL 5 HOH *5(H2 O) HELIX 1 AA1 MET A 4 GLN A 15 1 12 HELIX 2 AA2 SER A 28 ASN A 32 5 5 HELIX 3 AA3 THR A 65 HIS A 71 1 7 HELIX 4 AA4 HIS A 71 SER A 76 1 6 SHEET 1 AA1 2 LYS A 19 ILE A 20 0 SHEET 2 AA1 2 ILE A 37 GLN A 38 -1 O GLN A 38 N LYS A 19 SHEET 1 AA2 3 LEU A 34 ALA A 35 0 SHEET 2 AA2 3 TRP A 48 CYS A 51 -1 O PHE A 50 N ALA A 35 SHEET 3 AA2 3 VAL A 57 LYS A 59 -1 O LEU A 58 N VAL A 49 LINK SG CYS A 51 ZN ZN A 101 1555 1555 2.28 LINK SG CYS A 54 ZN ZN A 101 1555 1555 2.29 LINK NE2 HIS A 71 ZN ZN A 101 1555 1555 2.15 LINK SG CYS A 73 ZN ZN A 101 1555 1555 2.32 CRYST1 55.271 55.271 212.573 90.00 90.00 120.00 P 65 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018093 0.010446 0.000000 0.00000 SCALE2 0.000000 0.020892 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004704 0.00000