data_8EFW # _entry.id 8EFW # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.392 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8EFW pdb_00008efw 10.2210/pdb8efw/pdb WWPDB D_1000267942 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2023-09-20 2 'Structure model' 1 1 2023-11-08 3 'Structure model' 1 2 2024-05-01 4 'Structure model' 1 3 2024-05-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' citation 4 3 'Structure model' citation_author 5 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_ASTM' 4 2 'Structure model' '_citation.journal_id_CSD' 5 2 'Structure model' '_citation.journal_id_ISSN' 6 2 'Structure model' '_citation.journal_volume' 7 2 'Structure model' '_citation.page_first' 8 2 'Structure model' '_citation.page_last' 9 2 'Structure model' '_citation.pdbx_database_id_DOI' 10 2 'Structure model' '_citation.title' 11 2 'Structure model' '_citation.year' 12 2 'Structure model' '_citation_author.identifier_ORCID' 13 3 'Structure model' '_citation.country' 14 3 'Structure model' '_citation.journal_abbrev' 15 3 'Structure model' '_citation.journal_id_ASTM' 16 3 'Structure model' '_citation.journal_id_ISSN' 17 3 'Structure model' '_citation.pdbx_database_id_PubMed' 18 3 'Structure model' '_citation.title' 19 3 'Structure model' '_citation_author.name' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8EFW _pdbx_database_status.recvd_initial_deposition_date 2022-09-09 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 2 _pdbx_contact_author.email cdas@purdue.edu _pdbx_contact_author.name_first Chittaranjan _pdbx_contact_author.name_last Das _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-0567-7753 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Negron Teron, K.N.' 1 0000-0002-6489-2699 'Das, C.' 2 0000-0002-0567-7753 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Acta Crystallogr D Struct Biol' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2059-7983 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 79 _citation.language ? _citation.page_first 1044 _citation.page_last 1055 _citation.title 'Cocrystallization of ubiquitin-deubiquitinase complexes through disulfide linkage.' _citation.year 2023 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1107/S2059798323008501 _citation.pdbx_database_id_PubMed 37877948 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Negron Teron, K.I.' 1 ? primary 'Das, C.' 2 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man SdeA 21702.471 1 ? ? 'Deubiquitylase (DUB) domain, residues 6-201' ? 2 polymer man Ubiquitin 8622.922 1 ? G76C ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;PLGSMPKYVEGVELTQEGMHAIFARMGYGDITSGSIYNGVPTIDTGALNRQGFMPVLTGVGPHRDSGHWIMLIKGPGNQY YLFDPLGKTSGEGYQNILAAQLPMGSTLSVIPNGSGLNMGLCGYWVASAGLRAHQALNQHNPPTLLNVGQTITNEMRNEL DHDGYRKITGWLRAVADEFPEGEPQLDGKALRENTEKDLK ; ;PLGSMPKYVEGVELTQEGMHAIFARMGYGDITSGSIYNGVPTIDTGALNRQGFMPVLTGVGPHRDSGHWIMLIKGPGNQY YLFDPLGKTSGEGYQNILAAQLPMGSTLSVIPNGSGLNMGLCGYWVASAGLRAHQALNQHNPPTLLNVGQTITNEMRNEL DHDGYRKITGWLRAVADEFPEGEPQLDGKALRENTEKDLK ; B ? 2 'polypeptide(L)' no no MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGC MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGC C ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PRO n 1 2 LEU n 1 3 GLY n 1 4 SER n 1 5 MET n 1 6 PRO n 1 7 LYS n 1 8 TYR n 1 9 VAL n 1 10 GLU n 1 11 GLY n 1 12 VAL n 1 13 GLU n 1 14 LEU n 1 15 THR n 1 16 GLN n 1 17 GLU n 1 18 GLY n 1 19 MET n 1 20 HIS n 1 21 ALA n 1 22 ILE n 1 23 PHE n 1 24 ALA n 1 25 ARG n 1 26 MET n 1 27 GLY n 1 28 TYR n 1 29 GLY n 1 30 ASP n 1 31 ILE n 1 32 THR n 1 33 SER n 1 34 GLY n 1 35 SER n 1 36 ILE n 1 37 TYR n 1 38 ASN n 1 39 GLY n 1 40 VAL n 1 41 PRO n 1 42 THR n 1 43 ILE n 1 44 ASP n 1 45 THR n 1 46 GLY n 1 47 ALA n 1 48 LEU n 1 49 ASN n 1 50 ARG n 1 51 GLN n 1 52 GLY n 1 53 PHE n 1 54 MET n 1 55 PRO n 1 56 VAL n 1 57 LEU n 1 58 THR n 1 59 GLY n 1 60 VAL n 1 61 GLY n 1 62 PRO n 1 63 HIS n 1 64 ARG n 1 65 ASP n 1 66 SER n 1 67 GLY n 1 68 HIS n 1 69 TRP n 1 70 ILE n 1 71 MET n 1 72 LEU n 1 73 ILE n 1 74 LYS n 1 75 GLY n 1 76 PRO n 1 77 GLY n 1 78 ASN n 1 79 GLN n 1 80 TYR n 1 81 TYR n 1 82 LEU n 1 83 PHE n 1 84 ASP n 1 85 PRO n 1 86 LEU n 1 87 GLY n 1 88 LYS n 1 89 THR n 1 90 SER n 1 91 GLY n 1 92 GLU n 1 93 GLY n 1 94 TYR n 1 95 GLN n 1 96 ASN n 1 97 ILE n 1 98 LEU n 1 99 ALA n 1 100 ALA n 1 101 GLN n 1 102 LEU n 1 103 PRO n 1 104 MET n 1 105 GLY n 1 106 SER n 1 107 THR n 1 108 LEU n 1 109 SER n 1 110 VAL n 1 111 ILE n 1 112 PRO n 1 113 ASN n 1 114 GLY n 1 115 SER n 1 116 GLY n 1 117 LEU n 1 118 ASN n 1 119 MET n 1 120 GLY n 1 121 LEU n 1 122 CYS n 1 123 GLY n 1 124 TYR n 1 125 TRP n 1 126 VAL n 1 127 ALA n 1 128 SER n 1 129 ALA n 1 130 GLY n 1 131 LEU n 1 132 ARG n 1 133 ALA n 1 134 HIS n 1 135 GLN n 1 136 ALA n 1 137 LEU n 1 138 ASN n 1 139 GLN n 1 140 HIS n 1 141 ASN n 1 142 PRO n 1 143 PRO n 1 144 THR n 1 145 LEU n 1 146 LEU n 1 147 ASN n 1 148 VAL n 1 149 GLY n 1 150 GLN n 1 151 THR n 1 152 ILE n 1 153 THR n 1 154 ASN n 1 155 GLU n 1 156 MET n 1 157 ARG n 1 158 ASN n 1 159 GLU n 1 160 LEU n 1 161 ASP n 1 162 HIS n 1 163 ASP n 1 164 GLY n 1 165 TYR n 1 166 ARG n 1 167 LYS n 1 168 ILE n 1 169 THR n 1 170 GLY n 1 171 TRP n 1 172 LEU n 1 173 ARG n 1 174 ALA n 1 175 VAL n 1 176 ALA n 1 177 ASP n 1 178 GLU n 1 179 PHE n 1 180 PRO n 1 181 GLU n 1 182 GLY n 1 183 GLU n 1 184 PRO n 1 185 GLN n 1 186 LEU n 1 187 ASP n 1 188 GLY n 1 189 LYS n 1 190 ALA n 1 191 LEU n 1 192 ARG n 1 193 GLU n 1 194 ASN n 1 195 THR n 1 196 GLU n 1 197 LYS n 1 198 ASP n 1 199 LEU n 1 200 LYS n 2 1 MET n 2 2 GLN n 2 3 ILE n 2 4 PHE n 2 5 VAL n 2 6 LYS n 2 7 THR n 2 8 LEU n 2 9 THR n 2 10 GLY n 2 11 LYS n 2 12 THR n 2 13 ILE n 2 14 THR n 2 15 LEU n 2 16 GLU n 2 17 VAL n 2 18 GLU n 2 19 PRO n 2 20 SER n 2 21 ASP n 2 22 THR n 2 23 ILE n 2 24 GLU n 2 25 ASN n 2 26 VAL n 2 27 LYS n 2 28 ALA n 2 29 LYS n 2 30 ILE n 2 31 GLN n 2 32 ASP n 2 33 LYS n 2 34 GLU n 2 35 GLY n 2 36 ILE n 2 37 PRO n 2 38 PRO n 2 39 ASP n 2 40 GLN n 2 41 GLN n 2 42 ARG n 2 43 LEU n 2 44 ILE n 2 45 PHE n 2 46 ALA n 2 47 GLY n 2 48 LYS n 2 49 GLN n 2 50 LEU n 2 51 GLU n 2 52 ASP n 2 53 GLY n 2 54 ARG n 2 55 THR n 2 56 LEU n 2 57 SER n 2 58 ASP n 2 59 TYR n 2 60 ASN n 2 61 ILE n 2 62 GLN n 2 63 LYS n 2 64 GLU n 2 65 SER n 2 66 THR n 2 67 LEU n 2 68 HIS n 2 69 LEU n 2 70 VAL n 2 71 LEU n 2 72 ARG n 2 73 LEU n 2 74 ARG n 2 75 GLY n 2 76 CYS n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 200 ? ? ? ? ? ? ? ? ? 'Legionella pneumophila' 446 ? ? ? ? ? ? ? ? 'Escherichia coli BL21(DE3)' 469008 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 76 human ? UBB ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli BL21(DE3)' 469008 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PRO 1 -3 -3 PRO PRO B . n A 1 2 LEU 2 -2 -2 LEU LEU B . n A 1 3 GLY 3 -1 -1 GLY GLY B . n A 1 4 SER 4 0 0 SER SER B . n A 1 5 MET 5 1 1 MET MET B . n A 1 6 PRO 6 2 2 PRO PRO B . n A 1 7 LYS 7 3 3 LYS LYS B . n A 1 8 TYR 8 4 4 TYR TYR B . n A 1 9 VAL 9 5 5 VAL VAL B . n A 1 10 GLU 10 6 6 GLU GLU B . n A 1 11 GLY 11 7 7 GLY GLY B . n A 1 12 VAL 12 8 8 VAL VAL B . n A 1 13 GLU 13 9 9 GLU GLU B . n A 1 14 LEU 14 10 10 LEU LEU B . n A 1 15 THR 15 11 11 THR THR B . n A 1 16 GLN 16 12 12 GLN GLN B . n A 1 17 GLU 17 13 13 GLU GLU B . n A 1 18 GLY 18 14 14 GLY GLY B . n A 1 19 MET 19 15 15 MET MET B . n A 1 20 HIS 20 16 16 HIS HIS B . n A 1 21 ALA 21 17 17 ALA ALA B . n A 1 22 ILE 22 18 18 ILE ILE B . n A 1 23 PHE 23 19 19 PHE PHE B . n A 1 24 ALA 24 20 20 ALA ALA B . n A 1 25 ARG 25 21 21 ARG ARG B . n A 1 26 MET 26 22 22 MET MET B . n A 1 27 GLY 27 23 23 GLY GLY B . n A 1 28 TYR 28 24 24 TYR TYR B . n A 1 29 GLY 29 25 25 GLY GLY B . n A 1 30 ASP 30 26 26 ASP ASP B . n A 1 31 ILE 31 27 27 ILE ILE B . n A 1 32 THR 32 28 28 THR THR B . n A 1 33 SER 33 29 29 SER SER B . n A 1 34 GLY 34 30 30 GLY GLY B . n A 1 35 SER 35 31 31 SER SER B . n A 1 36 ILE 36 32 32 ILE ILE B . n A 1 37 TYR 37 33 33 TYR TYR B . n A 1 38 ASN 38 34 34 ASN ASN B . n A 1 39 GLY 39 35 35 GLY GLY B . n A 1 40 VAL 40 36 36 VAL VAL B . n A 1 41 PRO 41 37 37 PRO PRO B . n A 1 42 THR 42 38 38 THR THR B . n A 1 43 ILE 43 39 39 ILE ILE B . n A 1 44 ASP 44 40 40 ASP ASP B . n A 1 45 THR 45 41 41 THR THR B . n A 1 46 GLY 46 42 42 GLY GLY B . n A 1 47 ALA 47 43 43 ALA ALA B . n A 1 48 LEU 48 44 44 LEU LEU B . n A 1 49 ASN 49 45 45 ASN ASN B . n A 1 50 ARG 50 46 46 ARG ARG B . n A 1 51 GLN 51 47 47 GLN GLN B . n A 1 52 GLY 52 48 48 GLY GLY B . n A 1 53 PHE 53 49 49 PHE PHE B . n A 1 54 MET 54 50 50 MET MET B . n A 1 55 PRO 55 51 51 PRO PRO B . n A 1 56 VAL 56 52 52 VAL VAL B . n A 1 57 LEU 57 53 53 LEU LEU B . n A 1 58 THR 58 54 54 THR THR B . n A 1 59 GLY 59 55 55 GLY GLY B . n A 1 60 VAL 60 56 56 VAL VAL B . n A 1 61 GLY 61 57 57 GLY GLY B . n A 1 62 PRO 62 58 58 PRO PRO B . n A 1 63 HIS 63 59 59 HIS HIS B . n A 1 64 ARG 64 60 60 ARG ARG B . n A 1 65 ASP 65 61 61 ASP ASP B . n A 1 66 SER 66 62 62 SER SER B . n A 1 67 GLY 67 63 63 GLY GLY B . n A 1 68 HIS 68 64 64 HIS HIS B . n A 1 69 TRP 69 65 65 TRP TRP B . n A 1 70 ILE 70 66 66 ILE ILE B . n A 1 71 MET 71 67 67 MET MET B . n A 1 72 LEU 72 68 68 LEU LEU B . n A 1 73 ILE 73 69 69 ILE ILE B . n A 1 74 LYS 74 70 70 LYS LYS B . n A 1 75 GLY 75 71 71 GLY GLY B . n A 1 76 PRO 76 72 72 PRO PRO B . n A 1 77 GLY 77 73 73 GLY GLY B . n A 1 78 ASN 78 74 74 ASN ASN B . n A 1 79 GLN 79 75 75 GLN GLN B . n A 1 80 TYR 80 76 76 TYR TYR B . n A 1 81 TYR 81 77 77 TYR TYR B . n A 1 82 LEU 82 78 78 LEU LEU B . n A 1 83 PHE 83 79 79 PHE PHE B . n A 1 84 ASP 84 80 80 ASP ASP B . n A 1 85 PRO 85 81 81 PRO PRO B . n A 1 86 LEU 86 82 82 LEU LEU B . n A 1 87 GLY 87 83 83 GLY GLY B . n A 1 88 LYS 88 84 84 LYS LYS B . n A 1 89 THR 89 85 85 THR THR B . n A 1 90 SER 90 86 86 SER SER B . n A 1 91 GLY 91 87 87 GLY GLY B . n A 1 92 GLU 92 88 88 GLU GLU B . n A 1 93 GLY 93 89 89 GLY GLY B . n A 1 94 TYR 94 90 90 TYR TYR B . n A 1 95 GLN 95 91 91 GLN GLN B . n A 1 96 ASN 96 92 92 ASN ASN B . n A 1 97 ILE 97 93 93 ILE ILE B . n A 1 98 LEU 98 94 94 LEU LEU B . n A 1 99 ALA 99 95 95 ALA ALA B . n A 1 100 ALA 100 96 96 ALA ALA B . n A 1 101 GLN 101 97 97 GLN GLN B . n A 1 102 LEU 102 98 98 LEU LEU B . n A 1 103 PRO 103 99 99 PRO PRO B . n A 1 104 MET 104 100 100 MET MET B . n A 1 105 GLY 105 101 101 GLY GLY B . n A 1 106 SER 106 102 102 SER SER B . n A 1 107 THR 107 103 103 THR THR B . n A 1 108 LEU 108 104 104 LEU LEU B . n A 1 109 SER 109 105 105 SER SER B . n A 1 110 VAL 110 106 106 VAL VAL B . n A 1 111 ILE 111 107 107 ILE ILE B . n A 1 112 PRO 112 108 108 PRO PRO B . n A 1 113 ASN 113 109 109 ASN ASN B . n A 1 114 GLY 114 110 110 GLY GLY B . n A 1 115 SER 115 111 111 SER SER B . n A 1 116 GLY 116 112 112 GLY GLY B . n A 1 117 LEU 117 113 113 LEU LEU B . n A 1 118 ASN 118 114 114 ASN ASN B . n A 1 119 MET 119 115 115 MET MET B . n A 1 120 GLY 120 116 116 GLY GLY B . n A 1 121 LEU 121 117 117 LEU LEU B . n A 1 122 CYS 122 118 118 CYS CYS B . n A 1 123 GLY 123 119 119 GLY GLY B . n A 1 124 TYR 124 120 120 TYR TYR B . n A 1 125 TRP 125 121 121 TRP TRP B . n A 1 126 VAL 126 122 122 VAL VAL B . n A 1 127 ALA 127 123 123 ALA ALA B . n A 1 128 SER 128 124 124 SER SER B . n A 1 129 ALA 129 125 125 ALA ALA B . n A 1 130 GLY 130 126 126 GLY GLY B . n A 1 131 LEU 131 127 127 LEU LEU B . n A 1 132 ARG 132 128 128 ARG ARG B . n A 1 133 ALA 133 129 129 ALA ALA B . n A 1 134 HIS 134 130 130 HIS HIS B . n A 1 135 GLN 135 131 131 GLN GLN B . n A 1 136 ALA 136 132 132 ALA ALA B . n A 1 137 LEU 137 133 133 LEU LEU B . n A 1 138 ASN 138 134 134 ASN ASN B . n A 1 139 GLN 139 135 135 GLN GLN B . n A 1 140 HIS 140 136 136 HIS HIS B . n A 1 141 ASN 141 137 137 ASN ASN B . n A 1 142 PRO 142 138 138 PRO PRO B . n A 1 143 PRO 143 139 139 PRO PRO B . n A 1 144 THR 144 140 140 THR THR B . n A 1 145 LEU 145 141 141 LEU LEU B . n A 1 146 LEU 146 142 142 LEU LEU B . n A 1 147 ASN 147 143 143 ASN ASN B . n A 1 148 VAL 148 144 144 VAL VAL B . n A 1 149 GLY 149 145 145 GLY GLY B . n A 1 150 GLN 150 146 146 GLN GLN B . n A 1 151 THR 151 147 147 THR THR B . n A 1 152 ILE 152 148 148 ILE ILE B . n A 1 153 THR 153 149 149 THR THR B . n A 1 154 ASN 154 150 150 ASN ASN B . n A 1 155 GLU 155 151 151 GLU GLU B . n A 1 156 MET 156 152 152 MET MET B . n A 1 157 ARG 157 153 153 ARG ARG B . n A 1 158 ASN 158 154 154 ASN ASN B . n A 1 159 GLU 159 155 155 GLU GLU B . n A 1 160 LEU 160 156 156 LEU LEU B . n A 1 161 ASP 161 157 157 ASP ASP B . n A 1 162 HIS 162 158 158 HIS HIS B . n A 1 163 ASP 163 159 159 ASP ASP B . n A 1 164 GLY 164 160 160 GLY GLY B . n A 1 165 TYR 165 161 161 TYR TYR B . n A 1 166 ARG 166 162 162 ARG ARG B . n A 1 167 LYS 167 163 163 LYS LYS B . n A 1 168 ILE 168 164 164 ILE ILE B . n A 1 169 THR 169 165 165 THR THR B . n A 1 170 GLY 170 166 166 GLY GLY B . n A 1 171 TRP 171 167 167 TRP TRP B . n A 1 172 LEU 172 168 168 LEU LEU B . n A 1 173 ARG 173 169 169 ARG ARG B . n A 1 174 ALA 174 170 170 ALA ALA B . n A 1 175 VAL 175 171 171 VAL VAL B . n A 1 176 ALA 176 172 172 ALA ALA B . n A 1 177 ASP 177 173 173 ASP ASP B . n A 1 178 GLU 178 174 174 GLU GLU B . n A 1 179 PHE 179 175 175 PHE PHE B . n A 1 180 PRO 180 176 176 PRO PRO B . n A 1 181 GLU 181 177 177 GLU GLU B . n A 1 182 GLY 182 178 178 GLY GLY B . n A 1 183 GLU 183 179 179 GLU GLU B . n A 1 184 PRO 184 180 ? ? ? B . n A 1 185 GLN 185 181 ? ? ? B . n A 1 186 LEU 186 182 ? ? ? B . n A 1 187 ASP 187 183 ? ? ? B . n A 1 188 GLY 188 184 ? ? ? B . n A 1 189 LYS 189 185 ? ? ? B . n A 1 190 ALA 190 186 ? ? ? B . n A 1 191 LEU 191 187 ? ? ? B . n A 1 192 ARG 192 188 ? ? ? B . n A 1 193 GLU 193 189 ? ? ? B . n A 1 194 ASN 194 190 ? ? ? B . n A 1 195 THR 195 191 ? ? ? B . n A 1 196 GLU 196 192 ? ? ? B . n A 1 197 LYS 197 193 ? ? ? B . n A 1 198 ASP 198 194 ? ? ? B . n A 1 199 LEU 199 195 ? ? ? B . n A 1 200 LYS 200 196 ? ? ? B . n B 2 1 MET 1 1 1 MET MET C . n B 2 2 GLN 2 2 2 GLN GLN C . n B 2 3 ILE 3 3 3 ILE ILE C . n B 2 4 PHE 4 4 4 PHE PHE C . n B 2 5 VAL 5 5 5 VAL VAL C . n B 2 6 LYS 6 6 6 LYS LYS C . n B 2 7 THR 7 7 7 THR THR C . n B 2 8 LEU 8 8 8 LEU LEU C . n B 2 9 THR 9 9 9 THR THR C . n B 2 10 GLY 10 10 10 GLY GLY C . n B 2 11 LYS 11 11 11 LYS LYS C . n B 2 12 THR 12 12 12 THR THR C . n B 2 13 ILE 13 13 13 ILE ILE C . n B 2 14 THR 14 14 14 THR THR C . n B 2 15 LEU 15 15 15 LEU LEU C . n B 2 16 GLU 16 16 16 GLU GLU C . n B 2 17 VAL 17 17 17 VAL VAL C . n B 2 18 GLU 18 18 18 GLU GLU C . n B 2 19 PRO 19 19 19 PRO PRO C . n B 2 20 SER 20 20 20 SER SER C . n B 2 21 ASP 21 21 21 ASP ASP C . n B 2 22 THR 22 22 22 THR THR C . n B 2 23 ILE 23 23 23 ILE ILE C . n B 2 24 GLU 24 24 24 GLU GLU C . n B 2 25 ASN 25 25 25 ASN ASN C . n B 2 26 VAL 26 26 26 VAL VAL C . n B 2 27 LYS 27 27 27 LYS LYS C . n B 2 28 ALA 28 28 28 ALA ALA C . n B 2 29 LYS 29 29 29 LYS LYS C . n B 2 30 ILE 30 30 30 ILE ILE C . n B 2 31 GLN 31 31 31 GLN GLN C . n B 2 32 ASP 32 32 32 ASP ASP C . n B 2 33 LYS 33 33 33 LYS LYS C . n B 2 34 GLU 34 34 34 GLU GLU C . n B 2 35 GLY 35 35 35 GLY GLY C . n B 2 36 ILE 36 36 36 ILE ILE C . n B 2 37 PRO 37 37 37 PRO PRO C . n B 2 38 PRO 38 38 38 PRO PRO C . n B 2 39 ASP 39 39 39 ASP ASP C . n B 2 40 GLN 40 40 40 GLN GLN C . n B 2 41 GLN 41 41 41 GLN GLN C . n B 2 42 ARG 42 42 42 ARG ARG C . n B 2 43 LEU 43 43 43 LEU LEU C . n B 2 44 ILE 44 44 44 ILE ILE C . n B 2 45 PHE 45 45 45 PHE PHE C . n B 2 46 ALA 46 46 46 ALA ALA C . n B 2 47 GLY 47 47 47 GLY GLY C . n B 2 48 LYS 48 48 48 LYS LYS C . n B 2 49 GLN 49 49 49 GLN GLN C . n B 2 50 LEU 50 50 50 LEU LEU C . n B 2 51 GLU 51 51 51 GLU GLU C . n B 2 52 ASP 52 52 52 ASP ASP C . n B 2 53 GLY 53 53 53 GLY GLY C . n B 2 54 ARG 54 54 54 ARG ARG C . n B 2 55 THR 55 55 55 THR THR C . n B 2 56 LEU 56 56 56 LEU LEU C . n B 2 57 SER 57 57 57 SER SER C . n B 2 58 ASP 58 58 58 ASP ASP C . n B 2 59 TYR 59 59 59 TYR TYR C . n B 2 60 ASN 60 60 60 ASN ASN C . n B 2 61 ILE 61 61 61 ILE ILE C . n B 2 62 GLN 62 62 62 GLN GLN C . n B 2 63 LYS 63 63 63 LYS LYS C . n B 2 64 GLU 64 64 64 GLU GLU C . n B 2 65 SER 65 65 65 SER SER C . n B 2 66 THR 66 66 66 THR THR C . n B 2 67 LEU 67 67 67 LEU LEU C . n B 2 68 HIS 68 68 68 HIS HIS C . n B 2 69 LEU 69 69 69 LEU LEU C . n B 2 70 VAL 70 70 70 VAL VAL C . n B 2 71 LEU 71 71 71 LEU LEU C . n B 2 72 ARG 72 72 72 ARG ARG C . n B 2 73 LEU 73 73 73 LEU LEU C . n B 2 74 ARG 74 74 74 ARG ARG C . n B 2 75 GLY 75 75 75 GLY GLY C . n B 2 76 CYS 76 76 76 CYS CYS C . n # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 B SER 0 ? OG ? A SER 4 OG 2 1 Y 1 B MET 1 ? CG ? A MET 5 CG 3 1 Y 1 B MET 1 ? SD ? A MET 5 SD 4 1 Y 1 B MET 1 ? CE ? A MET 5 CE 5 1 Y 1 B ARG 21 ? CG ? A ARG 25 CG 6 1 Y 1 B ARG 21 ? CD ? A ARG 25 CD 7 1 Y 1 B ARG 21 ? NE ? A ARG 25 NE 8 1 Y 1 B ARG 21 ? CZ ? A ARG 25 CZ 9 1 Y 1 B ARG 21 ? NH1 ? A ARG 25 NH1 10 1 Y 1 B ARG 21 ? NH2 ? A ARG 25 NH2 11 1 Y 1 B ASP 26 ? CG ? A ASP 30 CG 12 1 Y 1 B ASP 26 ? OD1 ? A ASP 30 OD1 13 1 Y 1 B ASP 26 ? OD2 ? A ASP 30 OD2 14 1 Y 1 B ARG 60 ? CG ? A ARG 64 CG 15 1 Y 1 B ARG 60 ? CD ? A ARG 64 CD 16 1 Y 1 B ARG 60 ? NE ? A ARG 64 NE 17 1 Y 1 B ARG 60 ? CZ ? A ARG 64 CZ 18 1 Y 1 B ARG 60 ? NH1 ? A ARG 64 NH1 19 1 Y 1 B ARG 60 ? NH2 ? A ARG 64 NH2 20 1 Y 1 B LYS 70 ? CG ? A LYS 74 CG 21 1 Y 1 B LYS 70 ? CD ? A LYS 74 CD 22 1 Y 1 B LYS 70 ? CE ? A LYS 74 CE 23 1 Y 1 B LYS 70 ? NZ ? A LYS 74 NZ 24 1 Y 1 B LYS 84 ? CG ? A LYS 88 CG 25 1 Y 1 B LYS 84 ? CD ? A LYS 88 CD 26 1 Y 1 B LYS 84 ? CE ? A LYS 88 CE 27 1 Y 1 B LYS 84 ? NZ ? A LYS 88 NZ 28 1 Y 1 B LEU 113 ? CG ? A LEU 117 CG 29 1 Y 1 B LEU 113 ? CD1 ? A LEU 117 CD1 30 1 Y 1 B LEU 113 ? CD2 ? A LEU 117 CD2 31 1 Y 1 B ARG 128 ? CG ? A ARG 132 CG 32 1 Y 1 B ARG 128 ? CD ? A ARG 132 CD 33 1 Y 1 B ARG 128 ? NE ? A ARG 132 NE 34 1 Y 1 B ARG 128 ? CZ ? A ARG 132 CZ 35 1 Y 1 B ARG 128 ? NH1 ? A ARG 132 NH1 36 1 Y 1 B ARG 128 ? NH2 ? A ARG 132 NH2 37 1 Y 1 B THR 140 ? OG1 ? A THR 144 OG1 38 1 Y 1 B THR 140 ? CG2 ? A THR 144 CG2 39 1 Y 1 B LEU 142 ? CG ? A LEU 146 CG 40 1 Y 1 B LEU 142 ? CD1 ? A LEU 146 CD1 41 1 Y 1 B LEU 142 ? CD2 ? A LEU 146 CD2 42 1 Y 1 B GLN 146 ? CG ? A GLN 150 CG 43 1 Y 1 B GLN 146 ? CD ? A GLN 150 CD 44 1 Y 1 B GLN 146 ? OE1 ? A GLN 150 OE1 45 1 Y 1 B GLN 146 ? NE2 ? A GLN 150 NE2 46 1 Y 1 B ASP 159 ? CG ? A ASP 163 CG 47 1 Y 1 B ASP 159 ? OD1 ? A ASP 163 OD1 48 1 Y 1 B ASP 159 ? OD2 ? A ASP 163 OD2 49 1 Y 1 B ARG 162 ? CG ? A ARG 166 CG 50 1 Y 1 B ARG 162 ? CD ? A ARG 166 CD 51 1 Y 1 B ARG 162 ? NE ? A ARG 166 NE 52 1 Y 1 B ARG 162 ? CZ ? A ARG 166 CZ 53 1 Y 1 B ARG 162 ? NH1 ? A ARG 166 NH1 54 1 Y 1 B ARG 162 ? NH2 ? A ARG 166 NH2 55 1 Y 1 B LYS 163 ? CG ? A LYS 167 CG 56 1 Y 1 B LYS 163 ? CD ? A LYS 167 CD 57 1 Y 1 B LYS 163 ? CE ? A LYS 167 CE 58 1 Y 1 B LYS 163 ? NZ ? A LYS 167 NZ 59 1 Y 1 B GLU 174 ? CG ? A GLU 178 CG 60 1 Y 1 B GLU 174 ? CD ? A GLU 178 CD 61 1 Y 1 B GLU 174 ? OE1 ? A GLU 178 OE1 62 1 Y 1 B GLU 174 ? OE2 ? A GLU 178 OE2 63 1 Y 1 B PHE 175 ? CG ? A PHE 179 CG 64 1 Y 1 B PHE 175 ? CD1 ? A PHE 179 CD1 65 1 Y 1 B PHE 175 ? CD2 ? A PHE 179 CD2 66 1 Y 1 B PHE 175 ? CE1 ? A PHE 179 CE1 67 1 Y 1 B PHE 175 ? CE2 ? A PHE 179 CE2 68 1 Y 1 B PHE 175 ? CZ ? A PHE 179 CZ 69 1 Y 1 C MET 1 ? CG ? B MET 1 CG 70 1 Y 1 C MET 1 ? SD ? B MET 1 SD 71 1 Y 1 C MET 1 ? CE ? B MET 1 CE 72 1 Y 1 C GLN 2 ? CG ? B GLN 2 CG 73 1 Y 1 C GLN 2 ? CD ? B GLN 2 CD 74 1 Y 1 C GLN 2 ? OE1 ? B GLN 2 OE1 75 1 Y 1 C GLN 2 ? NE2 ? B GLN 2 NE2 76 1 Y 1 C THR 14 ? OG1 ? B THR 14 OG1 77 1 Y 1 C THR 14 ? CG2 ? B THR 14 CG2 78 1 Y 1 C LEU 15 ? CG ? B LEU 15 CG 79 1 Y 1 C LEU 15 ? CD1 ? B LEU 15 CD1 80 1 Y 1 C LEU 15 ? CD2 ? B LEU 15 CD2 81 1 Y 1 C GLU 16 ? CG ? B GLU 16 CG 82 1 Y 1 C GLU 16 ? CD ? B GLU 16 CD 83 1 Y 1 C GLU 16 ? OE1 ? B GLU 16 OE1 84 1 Y 1 C GLU 16 ? OE2 ? B GLU 16 OE2 85 1 Y 1 C VAL 17 ? CG1 ? B VAL 17 CG1 86 1 Y 1 C VAL 17 ? CG2 ? B VAL 17 CG2 87 1 Y 1 C GLU 18 ? CG ? B GLU 18 CG 88 1 Y 1 C GLU 18 ? CD ? B GLU 18 CD 89 1 Y 1 C GLU 18 ? OE1 ? B GLU 18 OE1 90 1 Y 1 C GLU 18 ? OE2 ? B GLU 18 OE2 91 1 Y 1 C SER 20 ? OG ? B SER 20 OG 92 1 Y 1 C ILE 23 ? CG1 ? B ILE 23 CG1 93 1 Y 1 C ILE 23 ? CG2 ? B ILE 23 CG2 94 1 Y 1 C ILE 23 ? CD1 ? B ILE 23 CD1 95 1 Y 1 C GLU 24 ? CG ? B GLU 24 CG 96 1 Y 1 C GLU 24 ? CD ? B GLU 24 CD 97 1 Y 1 C GLU 24 ? OE1 ? B GLU 24 OE1 98 1 Y 1 C GLU 24 ? OE2 ? B GLU 24 OE2 99 1 Y 1 C LYS 27 ? CG ? B LYS 27 CG 100 1 Y 1 C LYS 27 ? CD ? B LYS 27 CD 101 1 Y 1 C LYS 27 ? CE ? B LYS 27 CE 102 1 Y 1 C LYS 27 ? NZ ? B LYS 27 NZ 103 1 Y 1 C GLN 41 ? CG ? B GLN 41 CG 104 1 Y 1 C GLN 41 ? CD ? B GLN 41 CD 105 1 Y 1 C GLN 41 ? OE1 ? B GLN 41 OE1 106 1 Y 1 C GLN 41 ? NE2 ? B GLN 41 NE2 107 1 Y 1 C LYS 48 ? CG ? B LYS 48 CG 108 1 Y 1 C LYS 48 ? CD ? B LYS 48 CD 109 1 Y 1 C LYS 48 ? CE ? B LYS 48 CE 110 1 Y 1 C LYS 48 ? NZ ? B LYS 48 NZ 111 1 Y 1 C GLU 51 ? CG ? B GLU 51 CG 112 1 Y 1 C GLU 51 ? CD ? B GLU 51 CD 113 1 Y 1 C GLU 51 ? OE1 ? B GLU 51 OE1 114 1 Y 1 C GLU 51 ? OE2 ? B GLU 51 OE2 115 1 Y 1 C ARG 54 ? CG ? B ARG 54 CG 116 1 Y 1 C ARG 54 ? CD ? B ARG 54 CD 117 1 Y 1 C ARG 54 ? NE ? B ARG 54 NE 118 1 Y 1 C ARG 54 ? CZ ? B ARG 54 CZ 119 1 Y 1 C ARG 54 ? NH1 ? B ARG 54 NH1 120 1 Y 1 C ARG 54 ? NH2 ? B ARG 54 NH2 121 1 Y 1 C THR 55 ? OG1 ? B THR 55 OG1 122 1 Y 1 C THR 55 ? CG2 ? B THR 55 CG2 123 1 Y 1 C ASN 60 ? CG ? B ASN 60 CG 124 1 Y 1 C ASN 60 ? OD1 ? B ASN 60 OD1 125 1 Y 1 C ASN 60 ? ND2 ? B ASN 60 ND2 126 1 Y 1 C ILE 61 ? CG1 ? B ILE 61 CG1 127 1 Y 1 C ILE 61 ? CG2 ? B ILE 61 CG2 128 1 Y 1 C ILE 61 ? CD1 ? B ILE 61 CD1 129 1 Y 1 C GLN 62 ? CG ? B GLN 62 CG 130 1 Y 1 C GLN 62 ? CD ? B GLN 62 CD 131 1 Y 1 C GLN 62 ? OE1 ? B GLN 62 OE1 132 1 Y 1 C GLN 62 ? NE2 ? B GLN 62 NE2 133 1 Y 1 C LYS 63 ? CG ? B LYS 63 CG 134 1 Y 1 C LYS 63 ? CD ? B LYS 63 CD 135 1 Y 1 C LYS 63 ? CE ? B LYS 63 CE 136 1 Y 1 C LYS 63 ? NZ ? B LYS 63 NZ 137 1 Y 1 C GLU 64 ? CG ? B GLU 64 CG 138 1 Y 1 C GLU 64 ? CD ? B GLU 64 CD 139 1 Y 1 C GLU 64 ? OE1 ? B GLU 64 OE1 140 1 Y 1 C GLU 64 ? OE2 ? B GLU 64 OE2 # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.17.1_3660 1 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? . 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 8EFW _cell.details ? _cell.formula_units_Z ? _cell.length_a 90.905 _cell.length_a_esd ? _cell.length_b 90.905 _cell.length_b_esd ? _cell.length_c 65.821 _cell.length_c_esd ? _cell.volume 471053.950 _cell.volume_esd ? _cell.Z_PDB 6 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8EFW _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ;P 32 2" ; _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8EFW _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.59 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 52.50 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '2.8M sodium acetate: HCl pH7' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 294 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 16M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2019-07-26 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97918 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 24-ID-E' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97918 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 24-ID-E _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate 69.84 _reflns.entry_id 8EFW _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.81 _reflns.d_resolution_low 45.45 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 7850 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 98.80 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 2.9 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 11.9 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.995 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 2.81 _reflns_shell.d_res_low 2.91 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 7829 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.363 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 86.17 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8EFW _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.81 _refine.ls_d_res_low 39.36 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 7838 _refine.ls_number_reflns_R_free ? _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.80 _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2421 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model '1UBQ, 5CRB' _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 2.81 _refine_hist.d_res_low 39.36 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 1851 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 1851 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0078 ? 1891 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.5011 ? 2582 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0802 ? 293 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0101 ? 343 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 17.4817 ? 649 ? f_dihedral_angle_d ? ? # _struct.entry_id 8EFW _struct.title 'Structure of SdeA DUB Domain disulfide crosslinked with Ubiquitin' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8EFW _struct_keywords.text 'Complex, Deubiquitinase, HYDROLASE, HYDROLASE-SIGNALING PROTEIN complex' _struct_keywords.pdbx_keywords 'HYDROLASE/SIGNALING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP Q6RCR0_LEGPN Q6RCR0 ? 1 ;MPKYVEGVELTQEGMHAIFARMGYGDITSGSIYNGVPTIDTGALNRQGFMPVLTGVGPHRDSGHWIMLIKGPGNQYYLFD PLGKTSGEGYQNILAAQLPMGSTLSVIPNGSGLNMGLCGYWVASAGLRAHQALNQHNPPTLLNVGQTITNEMRNELDHDG YRKITGWLRAVADEFPEGDPQLDGKALRENTEKDLK ; 6 2 UNP UBB_HUMAN P0CG47 ? 2 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8EFW B 5 ? 200 ? Q6RCR0 6 ? 201 ? 1 196 2 2 8EFW C 1 ? 76 ? P0CG47 1 ? 76 ? 1 76 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 8EFW PRO B 1 ? UNP Q6RCR0 ? ? 'expression tag' -3 1 1 8EFW LEU B 2 ? UNP Q6RCR0 ? ? 'expression tag' -2 2 1 8EFW GLY B 3 ? UNP Q6RCR0 ? ? 'expression tag' -1 3 1 8EFW SER B 4 ? UNP Q6RCR0 ? ? 'expression tag' 0 4 1 8EFW GLU B 183 ? UNP Q6RCR0 ASP 184 conflict 179 5 2 8EFW CYS C 76 ? UNP P0CG47 GLY 76 'engineered mutation' 76 6 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1840 ? 1 MORE -9 ? 1 'SSA (A^2)' 12350 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support cross-linking _pdbx_struct_assembly_auth_evidence.details ;We used copper chloride as a oxidizing agent to drive disulfide crosslinking between the catalytic cysteine of SdeA and ubiquitin G76C mutation. ; # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 TYR A 8 ? VAL A 12 ? TYR B 4 VAL B 8 5 ? 5 HELX_P HELX_P2 AA2 GLN A 16 ? GLY A 27 ? GLN B 12 GLY B 23 1 ? 12 HELX_P HELX_P3 AA3 ASP A 44 ? GLY A 52 ? ASP B 40 GLY B 48 1 ? 9 HELX_P HELX_P4 AA4 GLY A 87 ? ALA A 100 ? GLY B 83 ALA B 96 1 ? 14 HELX_P HELX_P5 AA5 GLY A 123 ? ASN A 138 ? GLY B 119 ASN B 134 1 ? 16 HELX_P HELX_P6 AA6 THR A 144 ? GLU A 159 ? THR B 140 GLU B 155 1 ? 16 HELX_P HELX_P7 AA7 ASP A 161 ? ALA A 174 ? ASP B 157 ALA B 170 1 ? 14 HELX_P HELX_P8 AA8 THR B 22 ? GLY B 35 ? THR C 22 GLY C 35 1 ? 14 HELX_P HELX_P9 AA9 PRO B 37 ? ASP B 39 ? PRO C 37 ASP C 39 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id disulf1 _struct_conn.conn_type_id disulf _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 122 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 76 _struct_conn.ptnr2_label_atom_id SG _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id B _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 118 _struct_conn.ptnr2_auth_asym_id C _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 76 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 2.106 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 6 ? AA2 ? 5 ? AA3 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? parallel AA1 3 4 ? anti-parallel AA1 4 5 ? parallel AA1 5 6 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? parallel AA2 3 4 ? anti-parallel AA2 4 5 ? parallel AA3 1 2 ? anti-parallel AA3 2 3 ? parallel AA3 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LEU A 14 ? THR A 15 ? LEU B 10 THR B 11 AA1 2 ARG B 74 ? CYS B 76 ? ARG C 74 CYS C 76 AA1 3 SER A 66 ? LYS A 74 ? SER B 62 LYS B 70 AA1 4 PHE A 53 ? VAL A 60 ? PHE B 49 VAL B 56 AA1 5 GLY A 34 ? TYR A 37 ? GLY B 30 TYR B 33 AA1 6 VAL A 40 ? THR A 42 ? VAL B 36 THR B 38 AA2 1 LEU A 14 ? THR A 15 ? LEU B 10 THR B 11 AA2 2 ARG B 74 ? CYS B 76 ? ARG C 74 CYS C 76 AA2 3 SER A 66 ? LYS A 74 ? SER B 62 LYS B 70 AA2 4 GLN A 79 ? PHE A 83 ? GLN B 75 PHE B 79 AA2 5 THR A 107 ? VAL A 110 ? THR B 103 VAL B 106 AA3 1 THR B 12 ? GLU B 16 ? THR C 12 GLU C 16 AA3 2 GLN B 2 ? THR B 7 ? GLN C 2 THR C 7 AA3 3 THR B 66 ? LEU B 71 ? THR C 66 LEU C 71 AA3 4 GLN B 41 ? ILE B 44 ? GLN C 41 ILE C 44 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N LEU A 14 ? N LEU B 10 O GLY B 75 ? O GLY C 75 AA1 2 3 O CYS B 76 ? O CYS C 76 N GLY A 67 ? N GLY B 63 AA1 3 4 O LEU A 72 ? O LEU B 68 N MET A 54 ? N MET B 50 AA1 4 5 O PRO A 55 ? O PRO B 51 N GLY A 34 ? N GLY B 30 AA1 5 6 N SER A 35 ? N SER B 31 O THR A 42 ? O THR B 38 AA2 1 2 N LEU A 14 ? N LEU B 10 O GLY B 75 ? O GLY C 75 AA2 2 3 O CYS B 76 ? O CYS C 76 N GLY A 67 ? N GLY B 63 AA2 3 4 N MET A 71 ? N MET B 67 O PHE A 83 ? O PHE B 79 AA2 4 5 N LEU A 82 ? N LEU B 78 O SER A 109 ? O SER B 105 AA3 1 2 O LEU B 15 ? O LEU C 15 N ILE B 3 ? N ILE C 3 AA3 2 3 N PHE B 4 ? N PHE C 4 O LEU B 67 ? O LEU C 67 AA3 3 4 O HIS B 68 ? O HIS C 68 N ILE B 44 ? N ILE C 44 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 N B PHE 175 ? ? CA B PHE 175 ? ? C B PHE 175 ? ? 93.88 111.00 -17.12 2.70 N 2 1 N B GLY 178 ? ? CA B GLY 178 ? ? C B GLY 178 ? ? 91.89 113.10 -21.21 2.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU B -2 ? ? -59.19 98.39 2 1 SER B 0 ? ? 52.53 85.37 3 1 SER B 124 ? ? -123.80 -73.81 4 1 ALA B 170 ? ? -67.62 14.52 5 1 VAL B 171 ? ? -103.34 79.42 6 1 ALA B 172 ? ? -64.10 28.09 7 1 ASP B 173 ? ? -112.77 69.85 8 1 GLU B 174 ? ? -24.76 68.85 9 1 VAL C 17 ? ? -167.00 98.47 10 1 GLU C 18 ? ? -50.40 106.22 11 1 PRO C 19 ? ? -59.63 96.68 12 1 SER C 20 ? ? -173.59 -3.68 13 1 ASP C 21 ? ? -100.29 -141.14 14 1 ASN C 60 ? ? 49.85 18.77 15 1 GLU C 64 ? ? 85.56 -17.81 16 1 SER C 65 ? ? -47.93 154.93 # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 -y,x-y,z+2/3 3 -x+y,-x,z+1/3 4 x-y,-y,-z+1/3 5 -x,-x+y,-z+2/3 6 y,x,-z # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B PRO 180 ? A PRO 184 2 1 Y 1 B GLN 181 ? A GLN 185 3 1 Y 1 B LEU 182 ? A LEU 186 4 1 Y 1 B ASP 183 ? A ASP 187 5 1 Y 1 B GLY 184 ? A GLY 188 6 1 Y 1 B LYS 185 ? A LYS 189 7 1 Y 1 B ALA 186 ? A ALA 190 8 1 Y 1 B LEU 187 ? A LEU 191 9 1 Y 1 B ARG 188 ? A ARG 192 10 1 Y 1 B GLU 189 ? A GLU 193 11 1 Y 1 B ASN 190 ? A ASN 194 12 1 Y 1 B THR 191 ? A THR 195 13 1 Y 1 B GLU 192 ? A GLU 196 14 1 Y 1 B LYS 193 ? A LYS 197 15 1 Y 1 B ASP 194 ? A ASP 198 16 1 Y 1 B LEU 195 ? A LEU 199 17 1 Y 1 B LYS 196 ? A LYS 200 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 PHE N N N N 247 PHE CA C N S 248 PHE C C N N 249 PHE O O N N 250 PHE CB C N N 251 PHE CG C Y N 252 PHE CD1 C Y N 253 PHE CD2 C Y N 254 PHE CE1 C Y N 255 PHE CE2 C Y N 256 PHE CZ C Y N 257 PHE OXT O N N 258 PHE H H N N 259 PHE H2 H N N 260 PHE HA H N N 261 PHE HB2 H N N 262 PHE HB3 H N N 263 PHE HD1 H N N 264 PHE HD2 H N N 265 PHE HE1 H N N 266 PHE HE2 H N N 267 PHE HZ H N N 268 PHE HXT H N N 269 PRO N N N N 270 PRO CA C N S 271 PRO C C N N 272 PRO O O N N 273 PRO CB C N N 274 PRO CG C N N 275 PRO CD C N N 276 PRO OXT O N N 277 PRO H H N N 278 PRO HA H N N 279 PRO HB2 H N N 280 PRO HB3 H N N 281 PRO HG2 H N N 282 PRO HG3 H N N 283 PRO HD2 H N N 284 PRO HD3 H N N 285 PRO HXT H N N 286 SER N N N N 287 SER CA C N S 288 SER C C N N 289 SER O O N N 290 SER CB C N N 291 SER OG O N N 292 SER OXT O N N 293 SER H H N N 294 SER H2 H N N 295 SER HA H N N 296 SER HB2 H N N 297 SER HB3 H N N 298 SER HG H N N 299 SER HXT H N N 300 THR N N N N 301 THR CA C N S 302 THR C C N N 303 THR O O N N 304 THR CB C N R 305 THR OG1 O N N 306 THR CG2 C N N 307 THR OXT O N N 308 THR H H N N 309 THR H2 H N N 310 THR HA H N N 311 THR HB H N N 312 THR HG1 H N N 313 THR HG21 H N N 314 THR HG22 H N N 315 THR HG23 H N N 316 THR HXT H N N 317 TRP N N N N 318 TRP CA C N S 319 TRP C C N N 320 TRP O O N N 321 TRP CB C N N 322 TRP CG C Y N 323 TRP CD1 C Y N 324 TRP CD2 C Y N 325 TRP NE1 N Y N 326 TRP CE2 C Y N 327 TRP CE3 C Y N 328 TRP CZ2 C Y N 329 TRP CZ3 C Y N 330 TRP CH2 C Y N 331 TRP OXT O N N 332 TRP H H N N 333 TRP H2 H N N 334 TRP HA H N N 335 TRP HB2 H N N 336 TRP HB3 H N N 337 TRP HD1 H N N 338 TRP HE1 H N N 339 TRP HE3 H N N 340 TRP HZ2 H N N 341 TRP HZ3 H N N 342 TRP HH2 H N N 343 TRP HXT H N N 344 TYR N N N N 345 TYR CA C N S 346 TYR C C N N 347 TYR O O N N 348 TYR CB C N N 349 TYR CG C Y N 350 TYR CD1 C Y N 351 TYR CD2 C Y N 352 TYR CE1 C Y N 353 TYR CE2 C Y N 354 TYR CZ C Y N 355 TYR OH O N N 356 TYR OXT O N N 357 TYR H H N N 358 TYR H2 H N N 359 TYR HA H N N 360 TYR HB2 H N N 361 TYR HB3 H N N 362 TYR HD1 H N N 363 TYR HD2 H N N 364 TYR HE1 H N N 365 TYR HE2 H N N 366 TYR HH H N N 367 TYR HXT H N N 368 VAL N N N N 369 VAL CA C N S 370 VAL C C N N 371 VAL O O N N 372 VAL CB C N N 373 VAL CG1 C N N 374 VAL CG2 C N N 375 VAL OXT O N N 376 VAL H H N N 377 VAL H2 H N N 378 VAL HA H N N 379 VAL HB H N N 380 VAL HG11 H N N 381 VAL HG12 H N N 382 VAL HG13 H N N 383 VAL HG21 H N N 384 VAL HG22 H N N 385 VAL HG23 H N N 386 VAL HXT H N N 387 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 PHE N CA sing N N 235 PHE N H sing N N 236 PHE N H2 sing N N 237 PHE CA C sing N N 238 PHE CA CB sing N N 239 PHE CA HA sing N N 240 PHE C O doub N N 241 PHE C OXT sing N N 242 PHE CB CG sing N N 243 PHE CB HB2 sing N N 244 PHE CB HB3 sing N N 245 PHE CG CD1 doub Y N 246 PHE CG CD2 sing Y N 247 PHE CD1 CE1 sing Y N 248 PHE CD1 HD1 sing N N 249 PHE CD2 CE2 doub Y N 250 PHE CD2 HD2 sing N N 251 PHE CE1 CZ doub Y N 252 PHE CE1 HE1 sing N N 253 PHE CE2 CZ sing Y N 254 PHE CE2 HE2 sing N N 255 PHE CZ HZ sing N N 256 PHE OXT HXT sing N N 257 PRO N CA sing N N 258 PRO N CD sing N N 259 PRO N H sing N N 260 PRO CA C sing N N 261 PRO CA CB sing N N 262 PRO CA HA sing N N 263 PRO C O doub N N 264 PRO C OXT sing N N 265 PRO CB CG sing N N 266 PRO CB HB2 sing N N 267 PRO CB HB3 sing N N 268 PRO CG CD sing N N 269 PRO CG HG2 sing N N 270 PRO CG HG3 sing N N 271 PRO CD HD2 sing N N 272 PRO CD HD3 sing N N 273 PRO OXT HXT sing N N 274 SER N CA sing N N 275 SER N H sing N N 276 SER N H2 sing N N 277 SER CA C sing N N 278 SER CA CB sing N N 279 SER CA HA sing N N 280 SER C O doub N N 281 SER C OXT sing N N 282 SER CB OG sing N N 283 SER CB HB2 sing N N 284 SER CB HB3 sing N N 285 SER OG HG sing N N 286 SER OXT HXT sing N N 287 THR N CA sing N N 288 THR N H sing N N 289 THR N H2 sing N N 290 THR CA C sing N N 291 THR CA CB sing N N 292 THR CA HA sing N N 293 THR C O doub N N 294 THR C OXT sing N N 295 THR CB OG1 sing N N 296 THR CB CG2 sing N N 297 THR CB HB sing N N 298 THR OG1 HG1 sing N N 299 THR CG2 HG21 sing N N 300 THR CG2 HG22 sing N N 301 THR CG2 HG23 sing N N 302 THR OXT HXT sing N N 303 TRP N CA sing N N 304 TRP N H sing N N 305 TRP N H2 sing N N 306 TRP CA C sing N N 307 TRP CA CB sing N N 308 TRP CA HA sing N N 309 TRP C O doub N N 310 TRP C OXT sing N N 311 TRP CB CG sing N N 312 TRP CB HB2 sing N N 313 TRP CB HB3 sing N N 314 TRP CG CD1 doub Y N 315 TRP CG CD2 sing Y N 316 TRP CD1 NE1 sing Y N 317 TRP CD1 HD1 sing N N 318 TRP CD2 CE2 doub Y N 319 TRP CD2 CE3 sing Y N 320 TRP NE1 CE2 sing Y N 321 TRP NE1 HE1 sing N N 322 TRP CE2 CZ2 sing Y N 323 TRP CE3 CZ3 doub Y N 324 TRP CE3 HE3 sing N N 325 TRP CZ2 CH2 doub Y N 326 TRP CZ2 HZ2 sing N N 327 TRP CZ3 CH2 sing Y N 328 TRP CZ3 HZ3 sing N N 329 TRP CH2 HH2 sing N N 330 TRP OXT HXT sing N N 331 TYR N CA sing N N 332 TYR N H sing N N 333 TYR N H2 sing N N 334 TYR CA C sing N N 335 TYR CA CB sing N N 336 TYR CA HA sing N N 337 TYR C O doub N N 338 TYR C OXT sing N N 339 TYR CB CG sing N N 340 TYR CB HB2 sing N N 341 TYR CB HB3 sing N N 342 TYR CG CD1 doub Y N 343 TYR CG CD2 sing Y N 344 TYR CD1 CE1 sing Y N 345 TYR CD1 HD1 sing N N 346 TYR CD2 CE2 doub Y N 347 TYR CD2 HD2 sing N N 348 TYR CE1 CZ doub Y N 349 TYR CE1 HE1 sing N N 350 TYR CE2 CZ sing Y N 351 TYR CE2 HE2 sing N N 352 TYR CZ OH sing N N 353 TYR OH HH sing N N 354 TYR OXT HXT sing N N 355 VAL N CA sing N N 356 VAL N H sing N N 357 VAL N H2 sing N N 358 VAL CA C sing N N 359 VAL CA CB sing N N 360 VAL CA HA sing N N 361 VAL C O doub N N 362 VAL C OXT sing N N 363 VAL CB CG1 sing N N 364 VAL CB CG2 sing N N 365 VAL CB HB sing N N 366 VAL CG1 HG11 sing N N 367 VAL CG1 HG12 sing N N 368 VAL CG1 HG13 sing N N 369 VAL CG2 HG21 sing N N 370 VAL CG2 HG22 sing N N 371 VAL CG2 HG23 sing N N 372 VAL OXT HXT sing N N 373 # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number 5R01GM126296-02 _pdbx_audit_support.ordinal 1 # loop_ _pdbx_initial_refinement_model.accession_code _pdbx_initial_refinement_model.details _pdbx_initial_refinement_model.entity_id_list _pdbx_initial_refinement_model.id _pdbx_initial_refinement_model.source_name _pdbx_initial_refinement_model.type 1UBQ ? ? 1 PDB 'experimental model' 5CRB ? ? 2 PDB 'experimental model' # _space_group.name_H-M_alt 'P 32 2 1' _space_group.name_Hall ;P 32 2" ; _space_group.IT_number 154 _space_group.crystal_system trigonal _space_group.id 1 # _atom_sites.entry_id 8EFW _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.011000 _atom_sites.fract_transf_matrix[1][2] 0.006351 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012702 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015193 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 2.31000 1.02000 1.58860 0.86500 20.84390 10.20750 0.56870 51.65120 0.215599998832 ;4-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 12.21260 3.13220 2.01250 1.16630 0.00570 9.89330 28.99750 0.58260 -11.5290002823 ;4-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 3.04850 2.28680 1.54630 0.86700 13.27710 5.70110 0.32390 32.90890 0.250800013542 ;4-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? S ? ? 6.90530 5.20340 1.43790 1.58630 1.46790 22.21510 0.25360 56.17200 0.866900026798 ;4-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_