data_8EJP # _entry.id 8EJP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8EJP pdb_00008ejp 10.2210/pdb8ejp/pdb WWPDB D_1000264628 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8EJP _pdbx_database_status.recvd_initial_deposition_date 2022-09-18 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Yin, L.L.' 1 ? 'Shi, K.' 2 0000-0003-4175-3714 'Aihara, H.' 3 0000-0001-7508-6230 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Iscience _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2589-0042 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 26 _citation.language ? _citation.page_first 107823 _citation.page_last 107823 _citation.title 'Antagonism among DUX family members evolved from an ancestral toxic single homeodomain protein.' _citation.year 2023 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.isci.2023.107823 _citation.pdbx_database_id_PubMed 37744032 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Bosnakovski, D.' 1 ? primary 'Toso, E.A.' 2 ? primary 'Ener, E.T.' 3 ? primary 'Gearhart, M.D.' 4 ? primary 'Yin, L.' 5 ? primary 'Luttmann, F.F.' 6 ? primary 'Magli, A.' 7 ? primary 'Shi, K.' 8 ? primary 'Kim, J.' 9 ? primary 'Aihara, H.' 10 ? primary 'Kyba, M.' 11 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 8EJP _cell.details ? _cell.formula_units_Z ? _cell.length_a 74.499 _cell.length_a_esd ? _cell.length_b 74.499 _cell.length_b_esd ? _cell.length_c 99.688 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 16 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8EJP _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Homeobox domain-containing protein' 8301.640 2 ? ? ? ? 2 polymer syn ;DNA (5'-D(*GP*CP*GP*TP*AP*AP*TP*CP*TP*AP*AP*TP*CP*AP*AP*CP*A)-3') ; 5179.400 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(*TP*GP*TP*TP*GP*AP*TP*TP*AP*GP*AP*TP*TP*AP*CP*GP*C)-3') ; 5297.276 1 ? ? ? ? 4 non-polymer syn 1,2-ETHANEDIOL 62.068 2 ? ? ? ? 5 water nat water 18.015 3 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no GPAREGARRKRTTFNKTQLEILVKSFNKDPYPGIGVREHLASLIQIPESRIQVWFQNRRARQLGQKKKLEV GPAREGARRKRTTFNKTQLEILVKSFNKDPYPGIGVREHLASLIQIPESRIQVWFQNRRARQLGQKKKLEV A,B ? 2 polydeoxyribonucleotide no no '(DG)(DC)(DG)(DT)(DA)(DA)(DT)(DC)(DT)(DA)(DA)(DT)(DC)(DA)(DA)(DC)(DA)' GCGTAATCTAATCAACA C ? 3 polydeoxyribonucleotide no yes '(DT)(DG)(BRU)(DT)(DG)(DA)(DT)(DT)(DA)(DG)(DA)(DT)(DT)(DA)(DC)(DG)(DC)' TGUTGATTAGATTACGC D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 ALA n 1 4 ARG n 1 5 GLU n 1 6 GLY n 1 7 ALA n 1 8 ARG n 1 9 ARG n 1 10 LYS n 1 11 ARG n 1 12 THR n 1 13 THR n 1 14 PHE n 1 15 ASN n 1 16 LYS n 1 17 THR n 1 18 GLN n 1 19 LEU n 1 20 GLU n 1 21 ILE n 1 22 LEU n 1 23 VAL n 1 24 LYS n 1 25 SER n 1 26 PHE n 1 27 ASN n 1 28 LYS n 1 29 ASP n 1 30 PRO n 1 31 TYR n 1 32 PRO n 1 33 GLY n 1 34 ILE n 1 35 GLY n 1 36 VAL n 1 37 ARG n 1 38 GLU n 1 39 HIS n 1 40 LEU n 1 41 ALA n 1 42 SER n 1 43 LEU n 1 44 ILE n 1 45 GLN n 1 46 ILE n 1 47 PRO n 1 48 GLU n 1 49 SER n 1 50 ARG n 1 51 ILE n 1 52 GLN n 1 53 VAL n 1 54 TRP n 1 55 PHE n 1 56 GLN n 1 57 ASN n 1 58 ARG n 1 59 ARG n 1 60 ALA n 1 61 ARG n 1 62 GLN n 1 63 LEU n 1 64 GLY n 1 65 GLN n 1 66 LYS n 1 67 LYS n 1 68 LYS n 1 69 LEU n 1 70 GLU n 1 71 VAL n 2 1 DG n 2 2 DC n 2 3 DG n 2 4 DT n 2 5 DA n 2 6 DA n 2 7 DT n 2 8 DC n 2 9 DT n 2 10 DA n 2 11 DA n 2 12 DT n 2 13 DC n 2 14 DA n 2 15 DA n 2 16 DC n 2 17 DA n 3 1 DT n 3 2 DG n 3 3 BRU n 3 4 DT n 3 5 DG n 3 6 DA n 3 7 DT n 3 8 DT n 3 9 DA n 3 10 DG n 3 11 DA n 3 12 DT n 3 13 DT n 3 14 DA n 3 15 DC n 3 16 DG n 3 17 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 71 _entity_src_gen.gene_src_common_name platypus _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Ornithorhynchus anatinus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9258 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli K-12' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 83333 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 17 'Homo sapiens' ? 9606 ? 3 1 sample 1 17 'Homo sapiens' ? 9606 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP A0A6I8NF41_ORNAN A0A6I8NF41 ? 1 AREGARRKRTTFNKTQLEILVKSFNKDPYPGIGVREHLASLIQIPESRIQVWFQNRRARQLGQKKKLEV 43 2 PDB 8EJP 8EJP ? 2 ? 1 3 PDB 8EJP 8EJP ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8EJP A 3 ? 71 ? A0A6I8NF41 43 ? 111 ? 17 85 2 1 8EJP B 3 ? 71 ? A0A6I8NF41 43 ? 111 ? 17 85 3 2 8EJP C 1 ? 17 ? 8EJP 1 ? 17 ? 1 17 4 3 8EJP D 1 ? 17 ? 8EJP 1 ? 17 ? 1 17 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 8EJP GLY A 1 ? UNP A0A6I8NF41 ? ? 'expression tag' 15 1 1 8EJP PRO A 2 ? UNP A0A6I8NF41 ? ? 'expression tag' 16 2 2 8EJP GLY B 1 ? UNP A0A6I8NF41 ? ? 'expression tag' 15 3 2 8EJP PRO B 2 ? UNP A0A6I8NF41 ? ? 'expression tag' 16 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BRU 'DNA linking' n "5-BROMO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE" ? 'C9 H12 Br N2 O8 P' 387.078 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8EJP _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.55 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 51.84 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details PEG3350 _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 16M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2022-02-14 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9792 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 24-ID-C' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9792 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 24-ID-C _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate 63.870 _reflns.entry_id 8EJP _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.174 _reflns.d_resolution_low 59.676 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 10466 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 94.400 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 13.400 _reflns.pdbx_Rmerge_I_obs 0.112 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 10.700 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.117 _reflns.pdbx_Rpim_I_all 0.032 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 139973 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.998 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? _reflns.pdbx_CC_split_method ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split _reflns_shell.pdbx_percent_possible_ellipsoidal _reflns_shell.pdbx_percent_possible_spherical _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous _reflns_shell.pdbx_percent_possible_spherical_anomalous _reflns_shell.pdbx_redundancy_anomalous _reflns_shell.pdbx_CC_half_anomalous _reflns_shell.pdbx_absDiff_over_sigma_anomalous _reflns_shell.pdbx_percent_possible_anomalous 2.174 2.329 ? ? 6739 ? ? ? 523 64.500 ? ? ? ? 1.444 ? ? ? ? ? ? ? ? 12.900 ? ? ? 1.500 1.504 0.416 ? 1 1 0.649 ? ? ? ? ? ? ? ? ? ? 7.091 59.676 ? ? 6026 ? ? ? 523 99.600 ? ? ? ? 0.091 ? ? ? ? ? ? ? ? 11.500 ? ? ? 21.000 0.095 0.026 ? 2 1 0.997 ? ? ? ? ? ? ? ? ? ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 141.520 _refine.B_iso_mean 89.4784 _refine.B_iso_min 52.620 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8EJP _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.1740 _refine.ls_d_res_low 59.6760 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 10450 _refine.ls_number_reflns_R_free 1006 _refine.ls_number_reflns_R_work 18070 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 67.6300 _refine.ls_percent_reflns_R_free 5.2700 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2397 _refine.ls_R_factor_R_free 0.2593 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2384 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.340 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 42.2700 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.3100 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 2.1740 _refine_hist.d_res_low 59.6760 _refine_hist.number_atoms_solvent 3 _refine_hist.number_atoms_total 1648 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 146 _refine_hist.pdbx_B_iso_mean_ligand 75.24 _refine_hist.pdbx_B_iso_mean_solvent 66.57 _refine_hist.pdbx_number_atoms_protein 946 _refine_hist.pdbx_number_atoms_nucleic_acid 691 _refine_hist.pdbx_number_atoms_ligand 8 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_B_iso _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_asym_id _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.pdbx_rms _refine_ls_restr_ncs.pdbx_weight _refine_ls_restr_ncs.pdbx_ens_id 'X-RAY DIFFRACTION' 1 ? ? ? ? ? 1 TORSIONAL ? A 561 11.400 ? 1 'X-RAY DIFFRACTION' 2 ? ? ? ? ? 2 TORSIONAL ? B 561 11.400 ? 1 # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.1740 2.2100 . . 4 70 5.0000 . . . 0.1470 0.0000 0.4652 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.2100 2.2500 . . 16 210 16.0000 . . . 0.3221 0.0000 0.3611 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.2500 2.3000 . . 22 309 24.0000 . . . 0.3768 0.0000 0.3553 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.3000 2.3400 . . 24 462 35.0000 . . . 0.4167 0.0000 0.4159 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.3400 2.3900 . . 30 532 40.0000 . . . 0.4348 0.0000 0.3896 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.3900 2.4500 . . 39 605 46.0000 . . . 0.2651 0.0000 0.3806 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.4500 2.5100 . . 33 668 51.0000 . . . 0.4639 0.0000 0.3815 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.5100 2.5800 . . 46 756 57.0000 . . . 0.3648 0.0000 0.3772 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.5800 2.6500 . . 44 856 63.0000 . . . 0.5035 0.0000 0.3627 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.6500 2.7400 . . 41 929 70.0000 . . . 0.2756 0.0000 0.3700 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.7400 2.8400 . . 43 1058 77.0000 . . . 0.4760 0.0000 0.3685 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.8400 2.9500 . . 51 1149 85.0000 . . . 0.4924 0.0000 0.3656 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.9500 3.0800 . . 68 1234 92.0000 . . . 0.2116 0.0000 0.3392 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.0900 3.2500 . . 74 1280 96.0000 . . . 0.3410 0.0000 0.2949 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.2500 3.4500 . . 70 1320 99.0000 . . . 0.3318 0.0000 0.2665 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.4500 3.7200 . . 78 1326 100.0000 . . . 0.2608 0.0000 0.2549 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.7200 4.0900 . . 85 1307 100.0000 . . . 0.2654 0.0000 0.2292 . . . . . . . . . . . 'X-RAY DIFFRACTION' 4.0900 4.6800 . . 80 1335 100.0000 . . . 0.2214 0.0000 0.1921 . . . . . . . . . . . 'X-RAY DIFFRACTION' 4.6800 5.9000 . . 93 1318 100.0000 . . . 0.2065 0.0000 0.1952 . . . . . . . . . . . 'X-RAY DIFFRACTION' 5.9000 59.6760 . . 65 1346 100.0000 . . . 0.1795 0.0000 0.1577 . . . . . . . . . . . # loop_ _struct_ncs_dom.pdbx_ens_id _struct_ncs_dom.id _struct_ncs_dom.details 1 1 '(chain A and (resid 21 through 74 or resid 76))' 1 2 '(chain B and (resid 21 through 74 or resid 76))' # loop_ _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.selection_details _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.beg_auth_comp_id _struct_ncs_dom_lim.end_auth_comp_id 1 1 1 ? A 0 A 0 '(chain A and (resid 21 through 74 or resid 76))' ? ? ? ? ? ? ? ? ? ? 1 2 1 ? B 0 B 0 '(chain B and (resid 21 through 74 or resid 76))' ? ? ? ? ? ? ? ? ? ? # _struct_ncs_ens.id 1 _struct_ncs_ens.details ? # _struct.entry_id 8EJP _struct.title 'Crystal structure of the homeodomain of Platypus sDUX in complex with DNA containing 5-Bromouracil' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8EJP _struct_keywords.text 'DUX4, DNA BINDING PROTEIN, DNA BINDING PROTEIN-DNA complex' _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN/DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 4 ? G N N 5 ? H N N 5 ? I N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASN A 15 ? ASP A 29 ? ASN A 29 ASP A 43 1 ? 15 HELX_P HELX_P2 AA2 GLY A 33 ? GLN A 45 ? GLY A 47 GLN A 59 1 ? 13 HELX_P HELX_P3 AA3 PRO A 47 ? GLN A 62 ? PRO A 61 GLN A 76 1 ? 16 HELX_P HELX_P4 AA4 ASN B 15 ? ASP B 29 ? ASN B 29 ASP B 43 1 ? 15 HELX_P HELX_P5 AA5 GLY B 33 ? GLN B 45 ? GLY B 47 GLN B 59 1 ? 13 HELX_P HELX_P6 AA6 PRO B 47 ? GLN B 62 ? PRO B 61 GLN B 76 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? D DG 2 "O3'" ? ? ? 1_555 D BRU 3 P ? ? D DG 2 D BRU 3 1_555 ? ? ? ? ? ? ? 1.607 ? ? covale2 covale both ? D BRU 3 "O3'" ? ? ? 1_555 D DT 4 P ? ? D BRU 3 D DT 4 1_555 ? ? ? ? ? ? ? 1.606 ? ? hydrog1 hydrog ? ? C DG 1 N1 ? ? ? 1_555 D DC 17 N3 ? ? C DG 1 D DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? C DG 1 N2 ? ? ? 1_555 D DC 17 O2 ? ? C DG 1 D DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? C DG 1 O6 ? ? ? 1_555 D DC 17 N4 ? ? C DG 1 D DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? C DC 2 N3 ? ? ? 1_555 D DG 16 N1 ? ? C DC 2 D DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? C DC 2 N4 ? ? ? 1_555 D DG 16 O6 ? ? C DC 2 D DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? C DC 2 O2 ? ? ? 1_555 D DG 16 N2 ? ? C DC 2 D DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? C DG 3 N2 ? ? ? 1_555 D DC 15 N3 ? ? C DG 3 D DC 15 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog8 hydrog ? ? C DT 4 N3 ? ? ? 1_555 D DA 14 N1 ? ? C DT 4 D DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? C DT 4 O4 ? ? ? 1_555 D DA 14 N6 ? ? C DT 4 D DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? C DA 5 N1 ? ? ? 1_555 D DT 13 N3 ? ? C DA 5 D DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? C DA 5 N6 ? ? ? 1_555 D DT 13 O4 ? ? C DA 5 D DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? C DA 6 N1 ? ? ? 1_555 D DT 12 N3 ? ? C DA 6 D DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? C DA 6 N6 ? ? ? 1_555 D DT 12 O4 ? ? C DA 6 D DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? C DT 7 N3 ? ? ? 1_555 D DA 11 N1 ? ? C DT 7 D DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? C DT 7 O4 ? ? ? 1_555 D DA 11 N6 ? ? C DT 7 D DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? C DC 8 N3 ? ? ? 1_555 D DG 10 N1 ? ? C DC 8 D DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? C DC 8 N4 ? ? ? 1_555 D DG 10 O6 ? ? C DC 8 D DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C DC 8 O2 ? ? ? 1_555 D DG 10 N2 ? ? C DC 8 D DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C DT 9 N3 ? ? ? 1_555 D DA 9 N1 ? ? C DT 9 D DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C DT 9 O4 ? ? ? 1_555 D DA 9 N6 ? ? C DT 9 D DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C DA 10 N1 ? ? ? 1_555 D DT 8 N3 ? ? C DA 10 D DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C DA 10 N6 ? ? ? 1_555 D DT 8 O4 ? ? C DA 10 D DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C DA 11 N1 ? ? ? 1_555 D DT 7 N3 ? ? C DA 11 D DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C DA 11 N6 ? ? ? 1_555 D DT 7 O4 ? ? C DA 11 D DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C DT 12 N3 ? ? ? 1_555 D DA 6 N1 ? ? C DT 12 D DA 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C DT 12 O4 ? ? ? 1_555 D DA 6 N6 ? ? C DT 12 D DA 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? C DC 13 N3 ? ? ? 1_555 D DG 5 N1 ? ? C DC 13 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? C DC 13 N4 ? ? ? 1_555 D DG 5 O6 ? ? C DC 13 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? C DC 13 O2 ? ? ? 1_555 D DG 5 N2 ? ? C DC 13 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? C DA 14 N1 ? ? ? 1_555 D DT 4 N3 ? ? C DA 14 D DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? C DA 14 N6 ? ? ? 1_555 D DT 4 O4 ? ? C DA 14 D DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C DA 15 N1 ? ? ? 1_555 D BRU 3 N3 ? ? C DA 15 D BRU 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? C DA 15 N6 ? ? ? 1_555 D BRU 3 O4 ? ? C DA 15 D BRU 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C DC 16 N3 ? ? ? 1_555 D DG 2 N1 ? ? C DC 16 D DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? C DC 16 N4 ? ? ? 1_555 D DG 2 O6 ? ? C DC 16 D DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? C DC 16 O2 ? ? ? 1_555 D DG 2 N2 ? ? C DC 16 D DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? C DA 17 N1 ? ? ? 1_555 D DT 1 N3 ? ? C DA 17 D DT 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? C DA 17 N6 ? ? ? 1_555 D DT 1 O4 ? ? C DA 17 D DT 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # _atom_sites.entry_id 8EJP _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.013423 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013423 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010031 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol BR C N O P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 15 ? ? ? A . n A 1 2 PRO 2 16 ? ? ? A . n A 1 3 ALA 3 17 ? ? ? A . n A 1 4 ARG 4 18 ? ? ? A . n A 1 5 GLU 5 19 ? ? ? A . n A 1 6 GLY 6 20 ? ? ? A . n A 1 7 ALA 7 21 21 ALA ALA A . n A 1 8 ARG 8 22 22 ARG ARG A . n A 1 9 ARG 9 23 23 ARG ARG A . n A 1 10 LYS 10 24 24 LYS LYS A . n A 1 11 ARG 11 25 25 ARG ARG A . n A 1 12 THR 12 26 26 THR THR A . n A 1 13 THR 13 27 27 THR THR A . n A 1 14 PHE 14 28 28 PHE PHE A . n A 1 15 ASN 15 29 29 ASN ASN A . n A 1 16 LYS 16 30 30 LYS LYS A . n A 1 17 THR 17 31 31 THR THR A . n A 1 18 GLN 18 32 32 GLN GLN A . n A 1 19 LEU 19 33 33 LEU LEU A . n A 1 20 GLU 20 34 34 GLU GLU A . n A 1 21 ILE 21 35 35 ILE ILE A . n A 1 22 LEU 22 36 36 LEU LEU A . n A 1 23 VAL 23 37 37 VAL VAL A . n A 1 24 LYS 24 38 38 LYS LYS A . n A 1 25 SER 25 39 39 SER SER A . n A 1 26 PHE 26 40 40 PHE PHE A . n A 1 27 ASN 27 41 41 ASN ASN A . n A 1 28 LYS 28 42 42 LYS LYS A . n A 1 29 ASP 29 43 43 ASP ASP A . n A 1 30 PRO 30 44 44 PRO PRO A . n A 1 31 TYR 31 45 45 TYR TYR A . n A 1 32 PRO 32 46 46 PRO PRO A . n A 1 33 GLY 33 47 47 GLY GLY A . n A 1 34 ILE 34 48 48 ILE ILE A . n A 1 35 GLY 35 49 49 GLY GLY A . n A 1 36 VAL 36 50 50 VAL VAL A . n A 1 37 ARG 37 51 51 ARG ARG A . n A 1 38 GLU 38 52 52 GLU GLU A . n A 1 39 HIS 39 53 53 HIS HIS A . n A 1 40 LEU 40 54 54 LEU LEU A . n A 1 41 ALA 41 55 55 ALA ALA A . n A 1 42 SER 42 56 56 SER SER A . n A 1 43 LEU 43 57 57 LEU LEU A . n A 1 44 ILE 44 58 58 ILE ILE A . n A 1 45 GLN 45 59 59 GLN GLN A . n A 1 46 ILE 46 60 60 ILE ILE A . n A 1 47 PRO 47 61 61 PRO PRO A . n A 1 48 GLU 48 62 62 GLU GLU A . n A 1 49 SER 49 63 63 SER SER A . n A 1 50 ARG 50 64 64 ARG ARG A . n A 1 51 ILE 51 65 65 ILE ILE A . n A 1 52 GLN 52 66 66 GLN GLN A . n A 1 53 VAL 53 67 67 VAL VAL A . n A 1 54 TRP 54 68 68 TRP TRP A . n A 1 55 PHE 55 69 69 PHE PHE A . n A 1 56 GLN 56 70 70 GLN GLN A . n A 1 57 ASN 57 71 71 ASN ASN A . n A 1 58 ARG 58 72 72 ARG ARG A . n A 1 59 ARG 59 73 73 ARG ARG A . n A 1 60 ALA 60 74 74 ALA ALA A . n A 1 61 ARG 61 75 75 ARG ARG A . n A 1 62 GLN 62 76 76 GLN GLN A . n A 1 63 LEU 63 77 ? ? ? A . n A 1 64 GLY 64 78 ? ? ? A . n A 1 65 GLN 65 79 ? ? ? A . n A 1 66 LYS 66 80 ? ? ? A . n A 1 67 LYS 67 81 ? ? ? A . n A 1 68 LYS 68 82 ? ? ? A . n A 1 69 LEU 69 83 ? ? ? A . n A 1 70 GLU 70 84 ? ? ? A . n A 1 71 VAL 71 85 ? ? ? A . n B 1 1 GLY 1 15 ? ? ? B . n B 1 2 PRO 2 16 ? ? ? B . n B 1 3 ALA 3 17 ? ? ? B . n B 1 4 ARG 4 18 ? ? ? B . n B 1 5 GLU 5 19 ? ? ? B . n B 1 6 GLY 6 20 ? ? ? B . n B 1 7 ALA 7 21 21 ALA ALA B . n B 1 8 ARG 8 22 22 ARG ARG B . n B 1 9 ARG 9 23 23 ARG ARG B . n B 1 10 LYS 10 24 24 LYS LYS B . n B 1 11 ARG 11 25 25 ARG ARG B . n B 1 12 THR 12 26 26 THR THR B . n B 1 13 THR 13 27 27 THR THR B . n B 1 14 PHE 14 28 28 PHE PHE B . n B 1 15 ASN 15 29 29 ASN ASN B . n B 1 16 LYS 16 30 30 LYS LYS B . n B 1 17 THR 17 31 31 THR THR B . n B 1 18 GLN 18 32 32 GLN GLN B . n B 1 19 LEU 19 33 33 LEU LEU B . n B 1 20 GLU 20 34 34 GLU GLU B . n B 1 21 ILE 21 35 35 ILE ILE B . n B 1 22 LEU 22 36 36 LEU LEU B . n B 1 23 VAL 23 37 37 VAL VAL B . n B 1 24 LYS 24 38 38 LYS LYS B . n B 1 25 SER 25 39 39 SER SER B . n B 1 26 PHE 26 40 40 PHE PHE B . n B 1 27 ASN 27 41 41 ASN ASN B . n B 1 28 LYS 28 42 42 LYS LYS B . n B 1 29 ASP 29 43 43 ASP ASP B . n B 1 30 PRO 30 44 44 PRO PRO B . n B 1 31 TYR 31 45 45 TYR TYR B . n B 1 32 PRO 32 46 46 PRO PRO B . n B 1 33 GLY 33 47 47 GLY GLY B . n B 1 34 ILE 34 48 48 ILE ILE B . n B 1 35 GLY 35 49 49 GLY GLY B . n B 1 36 VAL 36 50 50 VAL VAL B . n B 1 37 ARG 37 51 51 ARG ARG B . n B 1 38 GLU 38 52 52 GLU GLU B . n B 1 39 HIS 39 53 53 HIS HIS B . n B 1 40 LEU 40 54 54 LEU LEU B . n B 1 41 ALA 41 55 55 ALA ALA B . n B 1 42 SER 42 56 56 SER SER B . n B 1 43 LEU 43 57 57 LEU LEU B . n B 1 44 ILE 44 58 58 ILE ILE B . n B 1 45 GLN 45 59 59 GLN GLN B . n B 1 46 ILE 46 60 60 ILE ILE B . n B 1 47 PRO 47 61 61 PRO PRO B . n B 1 48 GLU 48 62 62 GLU GLU B . n B 1 49 SER 49 63 63 SER SER B . n B 1 50 ARG 50 64 64 ARG ARG B . n B 1 51 ILE 51 65 65 ILE ILE B . n B 1 52 GLN 52 66 66 GLN GLN B . n B 1 53 VAL 53 67 67 VAL VAL B . n B 1 54 TRP 54 68 68 TRP TRP B . n B 1 55 PHE 55 69 69 PHE PHE B . n B 1 56 GLN 56 70 70 GLN GLN B . n B 1 57 ASN 57 71 71 ASN ASN B . n B 1 58 ARG 58 72 72 ARG ARG B . n B 1 59 ARG 59 73 73 ARG ARG B . n B 1 60 ALA 60 74 74 ALA ALA B . n B 1 61 ARG 61 75 75 ARG ARG B . n B 1 62 GLN 62 76 76 GLN GLN B . n B 1 63 LEU 63 77 ? ? ? B . n B 1 64 GLY 64 78 ? ? ? B . n B 1 65 GLN 65 79 ? ? ? B . n B 1 66 LYS 66 80 ? ? ? B . n B 1 67 LYS 67 81 ? ? ? B . n B 1 68 LYS 68 82 ? ? ? B . n B 1 69 LEU 69 83 ? ? ? B . n B 1 70 GLU 70 84 ? ? ? B . n B 1 71 VAL 71 85 ? ? ? B . n C 2 1 DG 1 1 1 DG DG C . n C 2 2 DC 2 2 2 DC DC C . n C 2 3 DG 3 3 3 DG DG C . n C 2 4 DT 4 4 4 DT DT C . n C 2 5 DA 5 5 5 DA DA C . n C 2 6 DA 6 6 6 DA DA C . n C 2 7 DT 7 7 7 DT DT C . n C 2 8 DC 8 8 8 DC DC C . n C 2 9 DT 9 9 9 DT DT C . n C 2 10 DA 10 10 10 DA DA C . n C 2 11 DA 11 11 11 DA DA C . n C 2 12 DT 12 12 12 DT DT C . n C 2 13 DC 13 13 13 DC DC C . n C 2 14 DA 14 14 14 DA DA C . n C 2 15 DA 15 15 15 DA DA C . n C 2 16 DC 16 16 16 DC DC C . n C 2 17 DA 17 17 17 DA DA C . n D 3 1 DT 1 1 1 DT DT D . n D 3 2 DG 2 2 2 DG DG D . n D 3 3 BRU 3 3 3 BRU BRU D . n D 3 4 DT 4 4 4 DT DT D . n D 3 5 DG 5 5 5 DG DG D . n D 3 6 DA 6 6 6 DA DA D . n D 3 7 DT 7 7 7 DT DT D . n D 3 8 DT 8 8 8 DT DT D . n D 3 9 DA 9 9 9 DA DA D . n D 3 10 DG 10 10 10 DG DG D . n D 3 11 DA 11 11 11 DA DA D . n D 3 12 DT 12 12 12 DT DT D . n D 3 13 DT 13 13 13 DT DT D . n D 3 14 DA 14 14 14 DA DA D . n D 3 15 DC 15 15 15 DC DC D . n D 3 16 DG 16 16 16 DG DG D . n D 3 17 DC 17 17 17 DC DC D . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email aihar001@umn.edu _pdbx_contact_author.name_first Hideki _pdbx_contact_author.name_last Aihara _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0001-7508-6230 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 EDO 1 101 101 EDO EDO A . F 4 EDO 1 101 101 EDO EDO B . G 5 HOH 1 201 4 HOH HOH A . H 5 HOH 1 201 3 HOH HOH B . I 5 HOH 1 101 5 HOH HOH C . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 7250 ? 1 MORE -10 ? 1 'SSA (A^2)' 10460 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2023-09-20 2 'Structure model' 1 1 2023-10-04 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 2 'Structure model' '_citation.pdbx_database_id_DOI' 9 2 'Structure model' '_citation.pdbx_database_id_PubMed' 10 2 'Structure model' '_citation.title' 11 2 'Structure model' '_citation.year' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined -14.7918 28.7416 3.4275 0.6346 ? -0.1101 ? -0.0505 ? 0.5987 ? 0.0348 ? 1.3118 ? 9.9086 ? -2.4862 ? 5.0996 ? 2.8108 ? -2.4500 ? 8.2013 ? -0.4396 ? 0.6484 ? 1.2108 ? 0.0034 ? 0.0722 ? 0.5799 ? -1.3213 ? 0.2285 ? 0.3545 ? 2 'X-RAY DIFFRACTION' ? refined -3.6437 14.9542 2.5267 0.4302 ? -0.0602 ? 0.0885 ? 0.7028 ? -0.0408 ? 1.0922 ? 2.1173 ? 1.0487 ? 2.4456 ? 6.1118 ? 3.7059 ? 9.8843 ? -0.5413 ? 0.7797 ? -0.3772 ? -0.4139 ? 0.4143 ? -0.4891 ? 0.6029 ? 1.1108 ? 0.1052 ? 3 'X-RAY DIFFRACTION' ? refined -11.5889 14.0667 9.7906 0.3820 ? -0.0233 ? 0.0793 ? 0.4908 ? 0.1360 ? 0.9872 ? 1.2492 ? 0.6988 ? 2.0585 ? 9.7943 ? 2.5246 ? 3.5964 ? -0.1416 ? -0.6694 ? -1.2068 ? 0.8278 ? -0.0073 ? -0.3156 ? 0.0895 ? -0.0263 ? 0.1376 ? 4 'X-RAY DIFFRACTION' ? refined -10.8509 18.0250 -2.7718 0.4764 ? -0.1877 ? 0.0100 ? 0.6631 ? 0.0585 ? 1.0527 ? 2.7814 ? 2.6131 ? 3.0146 ? 9.5122 ? 1.4128 ? 6.1071 ? -0.9102 ? 0.9566 ? -0.7199 ? -1.3422 ? 0.2196 ? 0.4327 ? -0.0963 ? 0.4095 ? 0.7158 ? 5 'X-RAY DIFFRACTION' ? refined -27.2727 7.2525 4.8821 0.6461 ? -0.0826 ? 0.1664 ? 0.5767 ? 0.0079 ? 1.4431 ? 5.6760 ? -5.8354 ? -6.3977 ? 6.0263 ? 6.5825 ? 7.2011 ? -1.4026 ? 0.0734 ? -1.6567 ? 0.3986 ? 0.4633 ? 0.6121 ? 0.6451 ? 0.3761 ? 0.9174 ? 6 'X-RAY DIFFRACTION' ? refined -38.5193 20.7402 2.0785 0.4294 ? -0.0896 ? -0.0462 ? 0.7403 ? 0.1357 ? 1.0321 ? 1.9759 ? 3.8171 ? -3.3028 ? 8.4818 ? -4.1630 ? 9.8241 ? -0.7157 ? 0.9482 ? 0.1627 ? -0.4109 ? 0.6775 ? 1.2146 ? -0.2977 ? -1.6331 ? 0.0748 ? 7 'X-RAY DIFFRACTION' ? refined -30.6415 22.6283 9.0990 0.3796 ? -0.0269 ? 0.0370 ? 0.4879 ? -0.0803 ? 1.3466 ? 2.7592 ? 0.9104 ? -0.0846 ? 5.3987 ? -4.6786 ? 8.6891 ? -0.1944 ? -0.2443 ? 0.9016 ? 0.6989 ? 0.4855 ? 0.3083 ? -1.2036 ? 0.8535 ? -0.3125 ? 8 'X-RAY DIFFRACTION' ? refined -30.7492 17.0882 -2.3408 0.2991 ? -0.6622 ? 0.3467 ? 0.5222 ? -0.0667 ? 1.4464 ? 3.2018 ? -0.1455 ? 0.4528 ? 2.3138 ? -1.4104 ? 2.1787 ? -0.3144 ? 0.5083 ? -0.5934 ? -0.5365 ? 0.2587 ? -0.1172 ? 0.6166 ? -0.3718 ? -0.2952 ? 9 'X-RAY DIFFRACTION' ? refined -15.3328 26.7714 -7.1027 0.7737 ? -0.5143 ? -0.2319 ? 0.8109 ? 0.2280 ? 1.1696 ? 1.5081 ? -1.5596 ? -1.8849 ? 4.5475 ? 0.7763 ? 2.8347 ? -1.3569 ? 0.3793 ? 0.5577 ? -1.4963 ? 0.2967 ? -0.3960 ? -0.4974 ? 0.2573 ? 0.3940 ? 10 'X-RAY DIFFRACTION' ? refined -26.8726 2.5795 -4.8912 0.8844 ? -0.4558 ? 0.0397 ? 1.0209 ? -0.0775 ? 1.7118 ? 4.8128 ? -0.5983 ? 0.9367 ? 3.2350 ? 3.6602 ? 8.9251 ? -0.4996 ? -0.3900 ? -0.5744 ? -0.9228 ? 0.7655 ? 0.5232 ? 1.9261 ? 0.4717 ? -0.3582 ? 11 'X-RAY DIFFRACTION' ? refined -32.4881 3.4136 -4.0372 0.7353 ? -0.7242 ? 0.3101 ? 0.7890 ? -0.3683 ? 1.9593 ? 0.8704 ? -1.0217 ? 0.1342 ? 1.1984 ? -0.1464 ? 0.0207 ? -0.1994 ? 0.5363 ? -0.8612 ? -0.6380 ? 0.3772 ? 0.6301 ? 0.7845 ? -0.7940 ? -0.6671 ? 12 'X-RAY DIFFRACTION' ? refined -15.8086 24.9198 -7.6179 0.7354 ? -0.4322 ? -0.0487 ? 1.0954 ? 0.0526 ? 1.3424 ? 1.9725 ? 1.9056 ? -0.6818 ? 7.7672 ? -0.7858 ? 3.1234 ? -0.9899 ? 1.0040 ? 0.4530 ? -0.8810 ? 0.3314 ? 0.5204 ? -0.5147 ? -0.2510 ? 0.3938 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? A 21 ? ? ? A 29 ? ? ;chain 'A' and (resid 21 through 29 ) ; 2 'X-RAY DIFFRACTION' 2 ? ? A 30 ? ? ? A 47 ? ? ;chain 'A' and (resid 30 through 47 ) ; 3 'X-RAY DIFFRACTION' 3 ? ? A 48 ? ? ? A 61 ? ? ;chain 'A' and (resid 48 through 61 ) ; 4 'X-RAY DIFFRACTION' 4 ? ? A 62 ? ? ? A 76 ? ? ;chain 'A' and (resid 62 through 76 ) ; 5 'X-RAY DIFFRACTION' 5 ? ? B 21 ? ? ? B 29 ? ? ;chain 'B' and (resid 21 through 29 ) ; 6 'X-RAY DIFFRACTION' 6 ? ? B 30 ? ? ? B 47 ? ? ;chain 'B' and (resid 30 through 47 ) ; 7 'X-RAY DIFFRACTION' 7 ? ? B 48 ? ? ? B 61 ? ? ;chain 'B' and (resid 48 through 61 ) ; 8 'X-RAY DIFFRACTION' 8 ? ? B 62 ? ? ? B 76 ? ? ;chain 'B' and (resid 62 through 76 ) ; 9 'X-RAY DIFFRACTION' 9 ? ? C 1 ? ? ? C 10 ? ? ;chain 'C' and (resid 1 through 10 ) ; 10 'X-RAY DIFFRACTION' 10 ? ? C 11 ? ? ? C 17 ? ? ;chain 'C' and (resid 11 through 17 ) ; 11 'X-RAY DIFFRACTION' 11 ? ? D 1 ? ? ? D 6 ? ? ;chain 'D' and (resid 1 through 6 ) ; 12 'X-RAY DIFFRACTION' 12 ? ? D 7 ? ? ? D 17 ? ? ;chain 'D' and (resid 7 through 17 ) ; # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.20.1_4487 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.27 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 5 # _pdbx_entry_details.entry_id 8EJP _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 "O4'" _pdbx_validate_rmsd_angle.auth_asym_id_1 D _pdbx_validate_rmsd_angle.auth_comp_id_1 DT _pdbx_validate_rmsd_angle.auth_seq_id_1 4 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 "C1'" _pdbx_validate_rmsd_angle.auth_asym_id_2 D _pdbx_validate_rmsd_angle.auth_comp_id_2 DT _pdbx_validate_rmsd_angle.auth_seq_id_2 4 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 N1 _pdbx_validate_rmsd_angle.auth_asym_id_3 D _pdbx_validate_rmsd_angle.auth_comp_id_3 DT _pdbx_validate_rmsd_angle.auth_seq_id_3 4 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 111.01 _pdbx_validate_rmsd_angle.angle_target_value 108.30 _pdbx_validate_rmsd_angle.angle_deviation 2.71 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.30 _pdbx_validate_rmsd_angle.linker_flag N # _pdbx_validate_main_chain_plane.id 1 _pdbx_validate_main_chain_plane.PDB_model_num 1 _pdbx_validate_main_chain_plane.auth_comp_id ARG _pdbx_validate_main_chain_plane.auth_asym_id A _pdbx_validate_main_chain_plane.auth_seq_id 75 _pdbx_validate_main_chain_plane.PDB_ins_code ? _pdbx_validate_main_chain_plane.label_alt_id B _pdbx_validate_main_chain_plane.improper_torsion_angle 12.42 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 15 ? A GLY 1 2 1 Y 1 A PRO 16 ? A PRO 2 3 1 Y 1 A ALA 17 ? A ALA 3 4 1 Y 1 A ARG 18 ? A ARG 4 5 1 Y 1 A GLU 19 ? A GLU 5 6 1 Y 1 A GLY 20 ? A GLY 6 7 1 Y 1 A LEU 77 ? A LEU 63 8 1 Y 1 A GLY 78 ? A GLY 64 9 1 Y 1 A GLN 79 ? A GLN 65 10 1 Y 1 A LYS 80 ? A LYS 66 11 1 Y 1 A LYS 81 ? A LYS 67 12 1 Y 1 A LYS 82 ? A LYS 68 13 1 Y 1 A LEU 83 ? A LEU 69 14 1 Y 1 A GLU 84 ? A GLU 70 15 1 Y 1 A VAL 85 ? A VAL 71 16 1 Y 1 B GLY 15 ? B GLY 1 17 1 Y 1 B PRO 16 ? B PRO 2 18 1 Y 1 B ALA 17 ? B ALA 3 19 1 Y 1 B ARG 18 ? B ARG 4 20 1 Y 1 B GLU 19 ? B GLU 5 21 1 Y 1 B GLY 20 ? B GLY 6 22 1 Y 1 B LEU 77 ? B LEU 63 23 1 Y 1 B GLY 78 ? B GLY 64 24 1 Y 1 B GLN 79 ? B GLN 65 25 1 Y 1 B LYS 80 ? B LYS 66 26 1 Y 1 B LYS 81 ? B LYS 67 27 1 Y 1 B LYS 82 ? B LYS 68 28 1 Y 1 B LEU 83 ? B LEU 69 29 1 Y 1 B GLU 84 ? B GLU 70 30 1 Y 1 B VAL 85 ? B VAL 71 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BRU N1 N N N 74 BRU C2 C N N 75 BRU N3 N N N 76 BRU C4 C N N 77 BRU C5 C N N 78 BRU C6 C N N 79 BRU O2 O N N 80 BRU O4 O N N 81 BRU BR BR N N 82 BRU "C1'" C N R 83 BRU "C2'" C N N 84 BRU "C3'" C N S 85 BRU "C4'" C N R 86 BRU "O3'" O N N 87 BRU "O4'" O N N 88 BRU "C5'" C N N 89 BRU "O5'" O N N 90 BRU P P N N 91 BRU OP1 O N N 92 BRU OP2 O N N 93 BRU OP3 O N N 94 BRU HN3 H N N 95 BRU H6 H N N 96 BRU "H1'" H N N 97 BRU "H2'" H N N 98 BRU "H2''" H N N 99 BRU "H3'" H N N 100 BRU "H4'" H N N 101 BRU "HO3'" H N N 102 BRU "H5'" H N N 103 BRU "H5''" H N N 104 BRU HOP2 H N N 105 BRU HOP3 H N N 106 DA OP3 O N N 107 DA P P N N 108 DA OP1 O N N 109 DA OP2 O N N 110 DA "O5'" O N N 111 DA "C5'" C N N 112 DA "C4'" C N R 113 DA "O4'" O N N 114 DA "C3'" C N S 115 DA "O3'" O N N 116 DA "C2'" C N N 117 DA "C1'" C N R 118 DA N9 N Y N 119 DA C8 C Y N 120 DA N7 N Y N 121 DA C5 C Y N 122 DA C6 C Y N 123 DA N6 N N N 124 DA N1 N Y N 125 DA C2 C Y N 126 DA N3 N Y N 127 DA C4 C Y N 128 DA HOP3 H N N 129 DA HOP2 H N N 130 DA "H5'" H N N 131 DA "H5''" H N N 132 DA "H4'" H N N 133 DA "H3'" H N N 134 DA "HO3'" H N N 135 DA "H2'" H N N 136 DA "H2''" H N N 137 DA "H1'" H N N 138 DA H8 H N N 139 DA H61 H N N 140 DA H62 H N N 141 DA H2 H N N 142 DC OP3 O N N 143 DC P P N N 144 DC OP1 O N N 145 DC OP2 O N N 146 DC "O5'" O N N 147 DC "C5'" C N N 148 DC "C4'" C N R 149 DC "O4'" O N N 150 DC "C3'" C N S 151 DC "O3'" O N N 152 DC "C2'" C N N 153 DC "C1'" C N R 154 DC N1 N N N 155 DC C2 C N N 156 DC O2 O N N 157 DC N3 N N N 158 DC C4 C N N 159 DC N4 N N N 160 DC C5 C N N 161 DC C6 C N N 162 DC HOP3 H N N 163 DC HOP2 H N N 164 DC "H5'" H N N 165 DC "H5''" H N N 166 DC "H4'" H N N 167 DC "H3'" H N N 168 DC "HO3'" H N N 169 DC "H2'" H N N 170 DC "H2''" H N N 171 DC "H1'" H N N 172 DC H41 H N N 173 DC H42 H N N 174 DC H5 H N N 175 DC H6 H N N 176 DG OP3 O N N 177 DG P P N N 178 DG OP1 O N N 179 DG OP2 O N N 180 DG "O5'" O N N 181 DG "C5'" C N N 182 DG "C4'" C N R 183 DG "O4'" O N N 184 DG "C3'" C N S 185 DG "O3'" O N N 186 DG "C2'" C N N 187 DG "C1'" C N R 188 DG N9 N Y N 189 DG C8 C Y N 190 DG N7 N Y N 191 DG C5 C Y N 192 DG C6 C N N 193 DG O6 O N N 194 DG N1 N N N 195 DG C2 C N N 196 DG N2 N N N 197 DG N3 N N N 198 DG C4 C Y N 199 DG HOP3 H N N 200 DG HOP2 H N N 201 DG "H5'" H N N 202 DG "H5''" H N N 203 DG "H4'" H N N 204 DG "H3'" H N N 205 DG "HO3'" H N N 206 DG "H2'" H N N 207 DG "H2''" H N N 208 DG "H1'" H N N 209 DG H8 H N N 210 DG H1 H N N 211 DG H21 H N N 212 DG H22 H N N 213 DT OP3 O N N 214 DT P P N N 215 DT OP1 O N N 216 DT OP2 O N N 217 DT "O5'" O N N 218 DT "C5'" C N N 219 DT "C4'" C N R 220 DT "O4'" O N N 221 DT "C3'" C N S 222 DT "O3'" O N N 223 DT "C2'" C N N 224 DT "C1'" C N R 225 DT N1 N N N 226 DT C2 C N N 227 DT O2 O N N 228 DT N3 N N N 229 DT C4 C N N 230 DT O4 O N N 231 DT C5 C N N 232 DT C7 C N N 233 DT C6 C N N 234 DT HOP3 H N N 235 DT HOP2 H N N 236 DT "H5'" H N N 237 DT "H5''" H N N 238 DT "H4'" H N N 239 DT "H3'" H N N 240 DT "HO3'" H N N 241 DT "H2'" H N N 242 DT "H2''" H N N 243 DT "H1'" H N N 244 DT H3 H N N 245 DT H71 H N N 246 DT H72 H N N 247 DT H73 H N N 248 DT H6 H N N 249 EDO C1 C N N 250 EDO O1 O N N 251 EDO C2 C N N 252 EDO O2 O N N 253 EDO H11 H N N 254 EDO H12 H N N 255 EDO HO1 H N N 256 EDO H21 H N N 257 EDO H22 H N N 258 EDO HO2 H N N 259 GLN N N N N 260 GLN CA C N S 261 GLN C C N N 262 GLN O O N N 263 GLN CB C N N 264 GLN CG C N N 265 GLN CD C N N 266 GLN OE1 O N N 267 GLN NE2 N N N 268 GLN OXT O N N 269 GLN H H N N 270 GLN H2 H N N 271 GLN HA H N N 272 GLN HB2 H N N 273 GLN HB3 H N N 274 GLN HG2 H N N 275 GLN HG3 H N N 276 GLN HE21 H N N 277 GLN HE22 H N N 278 GLN HXT H N N 279 GLU N N N N 280 GLU CA C N S 281 GLU C C N N 282 GLU O O N N 283 GLU CB C N N 284 GLU CG C N N 285 GLU CD C N N 286 GLU OE1 O N N 287 GLU OE2 O N N 288 GLU OXT O N N 289 GLU H H N N 290 GLU H2 H N N 291 GLU HA H N N 292 GLU HB2 H N N 293 GLU HB3 H N N 294 GLU HG2 H N N 295 GLU HG3 H N N 296 GLU HE2 H N N 297 GLU HXT H N N 298 GLY N N N N 299 GLY CA C N N 300 GLY C C N N 301 GLY O O N N 302 GLY OXT O N N 303 GLY H H N N 304 GLY H2 H N N 305 GLY HA2 H N N 306 GLY HA3 H N N 307 GLY HXT H N N 308 HIS N N N N 309 HIS CA C N S 310 HIS C C N N 311 HIS O O N N 312 HIS CB C N N 313 HIS CG C Y N 314 HIS ND1 N Y N 315 HIS CD2 C Y N 316 HIS CE1 C Y N 317 HIS NE2 N Y N 318 HIS OXT O N N 319 HIS H H N N 320 HIS H2 H N N 321 HIS HA H N N 322 HIS HB2 H N N 323 HIS HB3 H N N 324 HIS HD1 H N N 325 HIS HD2 H N N 326 HIS HE1 H N N 327 HIS HE2 H N N 328 HIS HXT H N N 329 HOH O O N N 330 HOH H1 H N N 331 HOH H2 H N N 332 ILE N N N N 333 ILE CA C N S 334 ILE C C N N 335 ILE O O N N 336 ILE CB C N S 337 ILE CG1 C N N 338 ILE CG2 C N N 339 ILE CD1 C N N 340 ILE OXT O N N 341 ILE H H N N 342 ILE H2 H N N 343 ILE HA H N N 344 ILE HB H N N 345 ILE HG12 H N N 346 ILE HG13 H N N 347 ILE HG21 H N N 348 ILE HG22 H N N 349 ILE HG23 H N N 350 ILE HD11 H N N 351 ILE HD12 H N N 352 ILE HD13 H N N 353 ILE HXT H N N 354 LEU N N N N 355 LEU CA C N S 356 LEU C C N N 357 LEU O O N N 358 LEU CB C N N 359 LEU CG C N N 360 LEU CD1 C N N 361 LEU CD2 C N N 362 LEU OXT O N N 363 LEU H H N N 364 LEU H2 H N N 365 LEU HA H N N 366 LEU HB2 H N N 367 LEU HB3 H N N 368 LEU HG H N N 369 LEU HD11 H N N 370 LEU HD12 H N N 371 LEU HD13 H N N 372 LEU HD21 H N N 373 LEU HD22 H N N 374 LEU HD23 H N N 375 LEU HXT H N N 376 LYS N N N N 377 LYS CA C N S 378 LYS C C N N 379 LYS O O N N 380 LYS CB C N N 381 LYS CG C N N 382 LYS CD C N N 383 LYS CE C N N 384 LYS NZ N N N 385 LYS OXT O N N 386 LYS H H N N 387 LYS H2 H N N 388 LYS HA H N N 389 LYS HB2 H N N 390 LYS HB3 H N N 391 LYS HG2 H N N 392 LYS HG3 H N N 393 LYS HD2 H N N 394 LYS HD3 H N N 395 LYS HE2 H N N 396 LYS HE3 H N N 397 LYS HZ1 H N N 398 LYS HZ2 H N N 399 LYS HZ3 H N N 400 LYS HXT H N N 401 PHE N N N N 402 PHE CA C N S 403 PHE C C N N 404 PHE O O N N 405 PHE CB C N N 406 PHE CG C Y N 407 PHE CD1 C Y N 408 PHE CD2 C Y N 409 PHE CE1 C Y N 410 PHE CE2 C Y N 411 PHE CZ C Y N 412 PHE OXT O N N 413 PHE H H N N 414 PHE H2 H N N 415 PHE HA H N N 416 PHE HB2 H N N 417 PHE HB3 H N N 418 PHE HD1 H N N 419 PHE HD2 H N N 420 PHE HE1 H N N 421 PHE HE2 H N N 422 PHE HZ H N N 423 PHE HXT H N N 424 PRO N N N N 425 PRO CA C N S 426 PRO C C N N 427 PRO O O N N 428 PRO CB C N N 429 PRO CG C N N 430 PRO CD C N N 431 PRO OXT O N N 432 PRO H H N N 433 PRO HA H N N 434 PRO HB2 H N N 435 PRO HB3 H N N 436 PRO HG2 H N N 437 PRO HG3 H N N 438 PRO HD2 H N N 439 PRO HD3 H N N 440 PRO HXT H N N 441 SER N N N N 442 SER CA C N S 443 SER C C N N 444 SER O O N N 445 SER CB C N N 446 SER OG O N N 447 SER OXT O N N 448 SER H H N N 449 SER H2 H N N 450 SER HA H N N 451 SER HB2 H N N 452 SER HB3 H N N 453 SER HG H N N 454 SER HXT H N N 455 THR N N N N 456 THR CA C N S 457 THR C C N N 458 THR O O N N 459 THR CB C N R 460 THR OG1 O N N 461 THR CG2 C N N 462 THR OXT O N N 463 THR H H N N 464 THR H2 H N N 465 THR HA H N N 466 THR HB H N N 467 THR HG1 H N N 468 THR HG21 H N N 469 THR HG22 H N N 470 THR HG23 H N N 471 THR HXT H N N 472 TRP N N N N 473 TRP CA C N S 474 TRP C C N N 475 TRP O O N N 476 TRP CB C N N 477 TRP CG C Y N 478 TRP CD1 C Y N 479 TRP CD2 C Y N 480 TRP NE1 N Y N 481 TRP CE2 C Y N 482 TRP CE3 C Y N 483 TRP CZ2 C Y N 484 TRP CZ3 C Y N 485 TRP CH2 C Y N 486 TRP OXT O N N 487 TRP H H N N 488 TRP H2 H N N 489 TRP HA H N N 490 TRP HB2 H N N 491 TRP HB3 H N N 492 TRP HD1 H N N 493 TRP HE1 H N N 494 TRP HE3 H N N 495 TRP HZ2 H N N 496 TRP HZ3 H N N 497 TRP HH2 H N N 498 TRP HXT H N N 499 TYR N N N N 500 TYR CA C N S 501 TYR C C N N 502 TYR O O N N 503 TYR CB C N N 504 TYR CG C Y N 505 TYR CD1 C Y N 506 TYR CD2 C Y N 507 TYR CE1 C Y N 508 TYR CE2 C Y N 509 TYR CZ C Y N 510 TYR OH O N N 511 TYR OXT O N N 512 TYR H H N N 513 TYR H2 H N N 514 TYR HA H N N 515 TYR HB2 H N N 516 TYR HB3 H N N 517 TYR HD1 H N N 518 TYR HD2 H N N 519 TYR HE1 H N N 520 TYR HE2 H N N 521 TYR HH H N N 522 TYR HXT H N N 523 VAL N N N N 524 VAL CA C N S 525 VAL C C N N 526 VAL O O N N 527 VAL CB C N N 528 VAL CG1 C N N 529 VAL CG2 C N N 530 VAL OXT O N N 531 VAL H H N N 532 VAL H2 H N N 533 VAL HA H N N 534 VAL HB H N N 535 VAL HG11 H N N 536 VAL HG12 H N N 537 VAL HG13 H N N 538 VAL HG21 H N N 539 VAL HG22 H N N 540 VAL HG23 H N N 541 VAL HXT H N N 542 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BRU N1 C2 sing N N 70 BRU N1 C6 sing N N 71 BRU N1 "C1'" sing N N 72 BRU C2 N3 sing N N 73 BRU C2 O2 doub N N 74 BRU N3 C4 sing N N 75 BRU N3 HN3 sing N N 76 BRU C4 C5 sing N N 77 BRU C4 O4 doub N N 78 BRU C5 C6 doub N N 79 BRU C5 BR sing N N 80 BRU C6 H6 sing N N 81 BRU "C1'" "C2'" sing N N 82 BRU "C1'" "O4'" sing N N 83 BRU "C1'" "H1'" sing N N 84 BRU "C2'" "C3'" sing N N 85 BRU "C2'" "H2'" sing N N 86 BRU "C2'" "H2''" sing N N 87 BRU "C3'" "C4'" sing N N 88 BRU "C3'" "O3'" sing N N 89 BRU "C3'" "H3'" sing N N 90 BRU "C4'" "O4'" sing N N 91 BRU "C4'" "C5'" sing N N 92 BRU "C4'" "H4'" sing N N 93 BRU "O3'" "HO3'" sing N N 94 BRU "C5'" "O5'" sing N N 95 BRU "C5'" "H5'" sing N N 96 BRU "C5'" "H5''" sing N N 97 BRU "O5'" P sing N N 98 BRU P OP1 doub N N 99 BRU P OP2 sing N N 100 BRU P OP3 sing N N 101 BRU OP2 HOP2 sing N N 102 BRU OP3 HOP3 sing N N 103 DA OP3 P sing N N 104 DA OP3 HOP3 sing N N 105 DA P OP1 doub N N 106 DA P OP2 sing N N 107 DA P "O5'" sing N N 108 DA OP2 HOP2 sing N N 109 DA "O5'" "C5'" sing N N 110 DA "C5'" "C4'" sing N N 111 DA "C5'" "H5'" sing N N 112 DA "C5'" "H5''" sing N N 113 DA "C4'" "O4'" sing N N 114 DA "C4'" "C3'" sing N N 115 DA "C4'" "H4'" sing N N 116 DA "O4'" "C1'" sing N N 117 DA "C3'" "O3'" sing N N 118 DA "C3'" "C2'" sing N N 119 DA "C3'" "H3'" sing N N 120 DA "O3'" "HO3'" sing N N 121 DA "C2'" "C1'" sing N N 122 DA "C2'" "H2'" sing N N 123 DA "C2'" "H2''" sing N N 124 DA "C1'" N9 sing N N 125 DA "C1'" "H1'" sing N N 126 DA N9 C8 sing Y N 127 DA N9 C4 sing Y N 128 DA C8 N7 doub Y N 129 DA C8 H8 sing N N 130 DA N7 C5 sing Y N 131 DA C5 C6 sing Y N 132 DA C5 C4 doub Y N 133 DA C6 N6 sing N N 134 DA C6 N1 doub Y N 135 DA N6 H61 sing N N 136 DA N6 H62 sing N N 137 DA N1 C2 sing Y N 138 DA C2 N3 doub Y N 139 DA C2 H2 sing N N 140 DA N3 C4 sing Y N 141 DC OP3 P sing N N 142 DC OP3 HOP3 sing N N 143 DC P OP1 doub N N 144 DC P OP2 sing N N 145 DC P "O5'" sing N N 146 DC OP2 HOP2 sing N N 147 DC "O5'" "C5'" sing N N 148 DC "C5'" "C4'" sing N N 149 DC "C5'" "H5'" sing N N 150 DC "C5'" "H5''" sing N N 151 DC "C4'" "O4'" sing N N 152 DC "C4'" "C3'" sing N N 153 DC "C4'" "H4'" sing N N 154 DC "O4'" "C1'" sing N N 155 DC "C3'" "O3'" sing N N 156 DC "C3'" "C2'" sing N N 157 DC "C3'" "H3'" sing N N 158 DC "O3'" "HO3'" sing N N 159 DC "C2'" "C1'" sing N N 160 DC "C2'" "H2'" sing N N 161 DC "C2'" "H2''" sing N N 162 DC "C1'" N1 sing N N 163 DC "C1'" "H1'" sing N N 164 DC N1 C2 sing N N 165 DC N1 C6 sing N N 166 DC C2 O2 doub N N 167 DC C2 N3 sing N N 168 DC N3 C4 doub N N 169 DC C4 N4 sing N N 170 DC C4 C5 sing N N 171 DC N4 H41 sing N N 172 DC N4 H42 sing N N 173 DC C5 C6 doub N N 174 DC C5 H5 sing N N 175 DC C6 H6 sing N N 176 DG OP3 P sing N N 177 DG OP3 HOP3 sing N N 178 DG P OP1 doub N N 179 DG P OP2 sing N N 180 DG P "O5'" sing N N 181 DG OP2 HOP2 sing N N 182 DG "O5'" "C5'" sing N N 183 DG "C5'" "C4'" sing N N 184 DG "C5'" "H5'" sing N N 185 DG "C5'" "H5''" sing N N 186 DG "C4'" "O4'" sing N N 187 DG "C4'" "C3'" sing N N 188 DG "C4'" "H4'" sing N N 189 DG "O4'" "C1'" sing N N 190 DG "C3'" "O3'" sing N N 191 DG "C3'" "C2'" sing N N 192 DG "C3'" "H3'" sing N N 193 DG "O3'" "HO3'" sing N N 194 DG "C2'" "C1'" sing N N 195 DG "C2'" "H2'" sing N N 196 DG "C2'" "H2''" sing N N 197 DG "C1'" N9 sing N N 198 DG "C1'" "H1'" sing N N 199 DG N9 C8 sing Y N 200 DG N9 C4 sing Y N 201 DG C8 N7 doub Y N 202 DG C8 H8 sing N N 203 DG N7 C5 sing Y N 204 DG C5 C6 sing N N 205 DG C5 C4 doub Y N 206 DG C6 O6 doub N N 207 DG C6 N1 sing N N 208 DG N1 C2 sing N N 209 DG N1 H1 sing N N 210 DG C2 N2 sing N N 211 DG C2 N3 doub N N 212 DG N2 H21 sing N N 213 DG N2 H22 sing N N 214 DG N3 C4 sing N N 215 DT OP3 P sing N N 216 DT OP3 HOP3 sing N N 217 DT P OP1 doub N N 218 DT P OP2 sing N N 219 DT P "O5'" sing N N 220 DT OP2 HOP2 sing N N 221 DT "O5'" "C5'" sing N N 222 DT "C5'" "C4'" sing N N 223 DT "C5'" "H5'" sing N N 224 DT "C5'" "H5''" sing N N 225 DT "C4'" "O4'" sing N N 226 DT "C4'" "C3'" sing N N 227 DT "C4'" "H4'" sing N N 228 DT "O4'" "C1'" sing N N 229 DT "C3'" "O3'" sing N N 230 DT "C3'" "C2'" sing N N 231 DT "C3'" "H3'" sing N N 232 DT "O3'" "HO3'" sing N N 233 DT "C2'" "C1'" sing N N 234 DT "C2'" "H2'" sing N N 235 DT "C2'" "H2''" sing N N 236 DT "C1'" N1 sing N N 237 DT "C1'" "H1'" sing N N 238 DT N1 C2 sing N N 239 DT N1 C6 sing N N 240 DT C2 O2 doub N N 241 DT C2 N3 sing N N 242 DT N3 C4 sing N N 243 DT N3 H3 sing N N 244 DT C4 O4 doub N N 245 DT C4 C5 sing N N 246 DT C5 C7 sing N N 247 DT C5 C6 doub N N 248 DT C7 H71 sing N N 249 DT C7 H72 sing N N 250 DT C7 H73 sing N N 251 DT C6 H6 sing N N 252 EDO C1 O1 sing N N 253 EDO C1 C2 sing N N 254 EDO C1 H11 sing N N 255 EDO C1 H12 sing N N 256 EDO O1 HO1 sing N N 257 EDO C2 O2 sing N N 258 EDO C2 H21 sing N N 259 EDO C2 H22 sing N N 260 EDO O2 HO2 sing N N 261 GLN N CA sing N N 262 GLN N H sing N N 263 GLN N H2 sing N N 264 GLN CA C sing N N 265 GLN CA CB sing N N 266 GLN CA HA sing N N 267 GLN C O doub N N 268 GLN C OXT sing N N 269 GLN CB CG sing N N 270 GLN CB HB2 sing N N 271 GLN CB HB3 sing N N 272 GLN CG CD sing N N 273 GLN CG HG2 sing N N 274 GLN CG HG3 sing N N 275 GLN CD OE1 doub N N 276 GLN CD NE2 sing N N 277 GLN NE2 HE21 sing N N 278 GLN NE2 HE22 sing N N 279 GLN OXT HXT sing N N 280 GLU N CA sing N N 281 GLU N H sing N N 282 GLU N H2 sing N N 283 GLU CA C sing N N 284 GLU CA CB sing N N 285 GLU CA HA sing N N 286 GLU C O doub N N 287 GLU C OXT sing N N 288 GLU CB CG sing N N 289 GLU CB HB2 sing N N 290 GLU CB HB3 sing N N 291 GLU CG CD sing N N 292 GLU CG HG2 sing N N 293 GLU CG HG3 sing N N 294 GLU CD OE1 doub N N 295 GLU CD OE2 sing N N 296 GLU OE2 HE2 sing N N 297 GLU OXT HXT sing N N 298 GLY N CA sing N N 299 GLY N H sing N N 300 GLY N H2 sing N N 301 GLY CA C sing N N 302 GLY CA HA2 sing N N 303 GLY CA HA3 sing N N 304 GLY C O doub N N 305 GLY C OXT sing N N 306 GLY OXT HXT sing N N 307 HIS N CA sing N N 308 HIS N H sing N N 309 HIS N H2 sing N N 310 HIS CA C sing N N 311 HIS CA CB sing N N 312 HIS CA HA sing N N 313 HIS C O doub N N 314 HIS C OXT sing N N 315 HIS CB CG sing N N 316 HIS CB HB2 sing N N 317 HIS CB HB3 sing N N 318 HIS CG ND1 sing Y N 319 HIS CG CD2 doub Y N 320 HIS ND1 CE1 doub Y N 321 HIS ND1 HD1 sing N N 322 HIS CD2 NE2 sing Y N 323 HIS CD2 HD2 sing N N 324 HIS CE1 NE2 sing Y N 325 HIS CE1 HE1 sing N N 326 HIS NE2 HE2 sing N N 327 HIS OXT HXT sing N N 328 HOH O H1 sing N N 329 HOH O H2 sing N N 330 ILE N CA sing N N 331 ILE N H sing N N 332 ILE N H2 sing N N 333 ILE CA C sing N N 334 ILE CA CB sing N N 335 ILE CA HA sing N N 336 ILE C O doub N N 337 ILE C OXT sing N N 338 ILE CB CG1 sing N N 339 ILE CB CG2 sing N N 340 ILE CB HB sing N N 341 ILE CG1 CD1 sing N N 342 ILE CG1 HG12 sing N N 343 ILE CG1 HG13 sing N N 344 ILE CG2 HG21 sing N N 345 ILE CG2 HG22 sing N N 346 ILE CG2 HG23 sing N N 347 ILE CD1 HD11 sing N N 348 ILE CD1 HD12 sing N N 349 ILE CD1 HD13 sing N N 350 ILE OXT HXT sing N N 351 LEU N CA sing N N 352 LEU N H sing N N 353 LEU N H2 sing N N 354 LEU CA C sing N N 355 LEU CA CB sing N N 356 LEU CA HA sing N N 357 LEU C O doub N N 358 LEU C OXT sing N N 359 LEU CB CG sing N N 360 LEU CB HB2 sing N N 361 LEU CB HB3 sing N N 362 LEU CG CD1 sing N N 363 LEU CG CD2 sing N N 364 LEU CG HG sing N N 365 LEU CD1 HD11 sing N N 366 LEU CD1 HD12 sing N N 367 LEU CD1 HD13 sing N N 368 LEU CD2 HD21 sing N N 369 LEU CD2 HD22 sing N N 370 LEU CD2 HD23 sing N N 371 LEU OXT HXT sing N N 372 LYS N CA sing N N 373 LYS N H sing N N 374 LYS N H2 sing N N 375 LYS CA C sing N N 376 LYS CA CB sing N N 377 LYS CA HA sing N N 378 LYS C O doub N N 379 LYS C OXT sing N N 380 LYS CB CG sing N N 381 LYS CB HB2 sing N N 382 LYS CB HB3 sing N N 383 LYS CG CD sing N N 384 LYS CG HG2 sing N N 385 LYS CG HG3 sing N N 386 LYS CD CE sing N N 387 LYS CD HD2 sing N N 388 LYS CD HD3 sing N N 389 LYS CE NZ sing N N 390 LYS CE HE2 sing N N 391 LYS CE HE3 sing N N 392 LYS NZ HZ1 sing N N 393 LYS NZ HZ2 sing N N 394 LYS NZ HZ3 sing N N 395 LYS OXT HXT sing N N 396 PHE N CA sing N N 397 PHE N H sing N N 398 PHE N H2 sing N N 399 PHE CA C sing N N 400 PHE CA CB sing N N 401 PHE CA HA sing N N 402 PHE C O doub N N 403 PHE C OXT sing N N 404 PHE CB CG sing N N 405 PHE CB HB2 sing N N 406 PHE CB HB3 sing N N 407 PHE CG CD1 doub Y N 408 PHE CG CD2 sing Y N 409 PHE CD1 CE1 sing Y N 410 PHE CD1 HD1 sing N N 411 PHE CD2 CE2 doub Y N 412 PHE CD2 HD2 sing N N 413 PHE CE1 CZ doub Y N 414 PHE CE1 HE1 sing N N 415 PHE CE2 CZ sing Y N 416 PHE CE2 HE2 sing N N 417 PHE CZ HZ sing N N 418 PHE OXT HXT sing N N 419 PRO N CA sing N N 420 PRO N CD sing N N 421 PRO N H sing N N 422 PRO CA C sing N N 423 PRO CA CB sing N N 424 PRO CA HA sing N N 425 PRO C O doub N N 426 PRO C OXT sing N N 427 PRO CB CG sing N N 428 PRO CB HB2 sing N N 429 PRO CB HB3 sing N N 430 PRO CG CD sing N N 431 PRO CG HG2 sing N N 432 PRO CG HG3 sing N N 433 PRO CD HD2 sing N N 434 PRO CD HD3 sing N N 435 PRO OXT HXT sing N N 436 SER N CA sing N N 437 SER N H sing N N 438 SER N H2 sing N N 439 SER CA C sing N N 440 SER CA CB sing N N 441 SER CA HA sing N N 442 SER C O doub N N 443 SER C OXT sing N N 444 SER CB OG sing N N 445 SER CB HB2 sing N N 446 SER CB HB3 sing N N 447 SER OG HG sing N N 448 SER OXT HXT sing N N 449 THR N CA sing N N 450 THR N H sing N N 451 THR N H2 sing N N 452 THR CA C sing N N 453 THR CA CB sing N N 454 THR CA HA sing N N 455 THR C O doub N N 456 THR C OXT sing N N 457 THR CB OG1 sing N N 458 THR CB CG2 sing N N 459 THR CB HB sing N N 460 THR OG1 HG1 sing N N 461 THR CG2 HG21 sing N N 462 THR CG2 HG22 sing N N 463 THR CG2 HG23 sing N N 464 THR OXT HXT sing N N 465 TRP N CA sing N N 466 TRP N H sing N N 467 TRP N H2 sing N N 468 TRP CA C sing N N 469 TRP CA CB sing N N 470 TRP CA HA sing N N 471 TRP C O doub N N 472 TRP C OXT sing N N 473 TRP CB CG sing N N 474 TRP CB HB2 sing N N 475 TRP CB HB3 sing N N 476 TRP CG CD1 doub Y N 477 TRP CG CD2 sing Y N 478 TRP CD1 NE1 sing Y N 479 TRP CD1 HD1 sing N N 480 TRP CD2 CE2 doub Y N 481 TRP CD2 CE3 sing Y N 482 TRP NE1 CE2 sing Y N 483 TRP NE1 HE1 sing N N 484 TRP CE2 CZ2 sing Y N 485 TRP CE3 CZ3 doub Y N 486 TRP CE3 HE3 sing N N 487 TRP CZ2 CH2 doub Y N 488 TRP CZ2 HZ2 sing N N 489 TRP CZ3 CH2 sing Y N 490 TRP CZ3 HZ3 sing N N 491 TRP CH2 HH2 sing N N 492 TRP OXT HXT sing N N 493 TYR N CA sing N N 494 TYR N H sing N N 495 TYR N H2 sing N N 496 TYR CA C sing N N 497 TYR CA CB sing N N 498 TYR CA HA sing N N 499 TYR C O doub N N 500 TYR C OXT sing N N 501 TYR CB CG sing N N 502 TYR CB HB2 sing N N 503 TYR CB HB3 sing N N 504 TYR CG CD1 doub Y N 505 TYR CG CD2 sing Y N 506 TYR CD1 CE1 sing Y N 507 TYR CD1 HD1 sing N N 508 TYR CD2 CE2 doub Y N 509 TYR CD2 HD2 sing N N 510 TYR CE1 CZ doub Y N 511 TYR CE1 HE1 sing N N 512 TYR CE2 CZ sing Y N 513 TYR CE2 HE2 sing N N 514 TYR CZ OH sing N N 515 TYR OH HH sing N N 516 TYR OXT HXT sing N N 517 VAL N CA sing N N 518 VAL N H sing N N 519 VAL N H2 sing N N 520 VAL CA C sing N N 521 VAL CA CB sing N N 522 VAL CA HA sing N N 523 VAL C O doub N N 524 VAL C OXT sing N N 525 VAL CB CG1 sing N N 526 VAL CB CG2 sing N N 527 VAL CB HB sing N N 528 VAL CG1 HG11 sing N N 529 VAL CG1 HG12 sing N N 530 VAL CG1 HG13 sing N N 531 VAL CG2 HG21 sing N N 532 VAL CG2 HG22 sing N N 533 VAL CG2 HG23 sing N N 534 VAL OXT HXT sing N N 535 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 8EJP 'double helix' 8EJP 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 C DG 1 1_555 D DC 17 1_555 -0.183 -0.097 -0.138 -7.029 -8.564 1.810 1 C_DG1:DC17_D C 1 ? D 17 ? 19 1 1 C DC 2 1_555 D DG 16 1_555 0.250 -0.162 -0.447 -1.042 -10.835 4.642 2 C_DC2:DG16_D C 2 ? D 16 ? 19 1 1 C DG 3 1_555 D DC 15 1_555 1.204 0.496 -0.012 -0.813 -16.371 16.813 3 C_DG3:DC15_D C 3 ? D 15 ? ? 1 1 C DT 4 1_555 D DA 14 1_555 -0.220 -0.116 -0.220 3.131 -4.822 9.371 4 C_DT4:DA14_D C 4 ? D 14 ? 20 1 1 C DA 5 1_555 D DT 13 1_555 0.084 -0.103 0.138 -5.843 -5.332 -0.584 5 C_DA5:DT13_D C 5 ? D 13 ? 20 1 1 C DA 6 1_555 D DT 12 1_555 0.082 -0.144 0.296 -5.263 -7.431 3.672 6 C_DA6:DT12_D C 6 ? D 12 ? 20 1 1 C DT 7 1_555 D DA 11 1_555 -0.111 -0.156 0.351 -2.201 -10.489 -3.124 7 C_DT7:DA11_D C 7 ? D 11 ? 20 1 1 C DC 8 1_555 D DG 10 1_555 0.163 -0.113 0.248 -6.325 -9.181 -0.051 8 C_DC8:DG10_D C 8 ? D 10 ? 19 1 1 C DT 9 1_555 D DA 9 1_555 -0.258 -0.166 0.553 -3.372 -7.202 -5.621 9 C_DT9:DA9_D C 9 ? D 9 ? 20 1 1 C DA 10 1_555 D DT 8 1_555 0.107 -0.135 0.024 -2.379 -3.819 -0.462 10 C_DA10:DT8_D C 10 ? D 8 ? 20 1 1 C DA 11 1_555 D DT 7 1_555 0.078 -0.135 -0.040 -0.811 -3.685 2.371 11 C_DA11:DT7_D C 11 ? D 7 ? 20 1 1 C DT 12 1_555 D DA 6 1_555 -0.059 -0.165 -0.182 0.936 -4.339 5.170 12 C_DT12:DA6_D C 12 ? D 6 ? 20 1 1 C DC 13 1_555 D DG 5 1_555 0.224 -0.139 -0.216 -0.122 -7.768 2.395 13 C_DC13:DG5_D C 13 ? D 5 ? 19 1 1 C DA 14 1_555 D DT 4 1_555 -0.001 -0.157 -0.139 -1.539 -6.212 5.948 14 C_DA14:DT4_D C 14 ? D 4 ? 20 1 1 C DA 15 1_555 D BRU 3 1_555 0.042 -0.421 0.918 5.839 -15.690 6.353 15 C_DA15:BRU3_D C 15 ? D 3 ? 20 1 1 C DC 16 1_555 D DG 2 1_555 0.190 -0.147 0.162 -1.333 -13.198 0.534 16 C_DC16:DG2_D C 16 ? D 2 ? 19 1 1 C DA 17 1_555 D DT 1 1_555 0.274 -0.412 0.875 9.657 -4.714 5.511 17 C_DA17:DT1_D C 17 ? D 1 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 C DG 1 1_555 D DC 17 1_555 C DC 2 1_555 D DG 16 1_555 -0.685 1.325 3.044 0.113 -2.321 37.849 2.311 1.068 2.958 -3.574 -0.175 37.917 1 CC_DG1DC2:DG16DC17_DD C 1 ? D 17 ? C 2 ? D 16 ? 1 C DC 2 1_555 D DG 16 1_555 C DG 3 1_555 D DC 15 1_555 0.917 2.145 3.318 -2.528 2.196 47.052 2.497 -1.358 3.358 2.747 3.162 47.164 2 CC_DC2DG3:DC15DG16_DD C 2 ? D 16 ? C 3 ? D 15 ? 1 C DG 3 1_555 D DC 15 1_555 C DT 4 1_555 D DA 14 1_555 1.046 0.781 3.326 1.057 -3.461 29.451 2.261 -1.818 3.249 -6.776 -2.069 29.667 3 CC_DG3DT4:DA14DC15_DD C 3 ? D 15 ? C 4 ? D 14 ? 1 C DT 4 1_555 D DA 14 1_555 C DA 5 1_555 D DT 13 1_555 -1.520 0.611 3.545 -7.818 3.907 36.875 0.370 1.197 3.819 6.073 12.151 37.862 4 CC_DT4DA5:DT13DA14_DD C 4 ? D 14 ? C 5 ? D 13 ? 1 C DA 5 1_555 D DT 13 1_555 C DA 6 1_555 D DT 12 1_555 0.462 -0.614 3.287 -4.944 5.370 38.163 -1.568 -1.289 3.094 8.121 7.478 38.830 5 CC_DA5DA6:DT12DT13_DD C 5 ? D 13 ? C 6 ? D 12 ? 1 C DA 6 1_555 D DT 12 1_555 C DT 7 1_555 D DA 11 1_555 -0.945 -0.972 3.164 -3.075 2.067 29.755 -2.293 1.211 3.170 4.005 5.959 29.980 6 CC_DA6DT7:DA11DT12_DD C 6 ? D 12 ? C 7 ? D 11 ? 1 C DT 7 1_555 D DA 11 1_555 C DC 8 1_555 D DG 10 1_555 -0.279 -0.444 3.321 -3.178 -0.329 34.071 -0.702 -0.037 3.336 -0.561 5.408 34.216 7 CC_DT7DC8:DG10DA11_DD C 7 ? D 11 ? C 8 ? D 10 ? 1 C DC 8 1_555 D DG 10 1_555 C DT 9 1_555 D DA 9 1_555 -0.667 -0.387 3.291 -2.362 5.180 31.223 -1.665 0.784 3.228 9.525 4.343 31.725 8 CC_DC8DT9:DA9DG10_DD C 8 ? D 10 ? C 9 ? D 9 ? 1 C DT 9 1_555 D DA 9 1_555 C DA 10 1_555 D DT 8 1_555 0.048 -0.033 3.322 -0.586 5.129 36.672 -0.752 -0.155 3.287 8.103 0.926 37.021 9 CC_DT9DA10:DT8DA9_DD C 9 ? D 9 ? C 10 ? D 8 ? 1 C DA 10 1_555 D DT 8 1_555 C DA 11 1_555 D DT 7 1_555 0.264 -0.807 3.257 -0.265 2.240 30.432 -1.972 -0.553 3.188 4.259 0.504 30.514 10 CC_DA10DA11:DT7DT8_DD C 10 ? D 8 ? C 11 ? D 7 ? 1 C DA 11 1_555 D DT 7 1_555 C DT 12 1_555 D DA 6 1_555 0.244 -0.777 3.298 1.188 1.000 30.747 -1.660 -0.227 3.279 1.885 -2.239 30.785 11 CC_DA11DT12:DA6DT7_DD C 11 ? D 7 ? C 12 ? D 6 ? 1 C DT 12 1_555 D DA 6 1_555 C DC 13 1_555 D DG 5 1_555 -0.220 -0.450 3.283 0.322 1.245 38.362 -0.840 0.375 3.266 1.894 -0.489 38.382 12 CC_DT12DC13:DG5DA6_DD C 12 ? D 6 ? C 13 ? D 5 ? 1 C DC 13 1_555 D DG 5 1_555 C DA 14 1_555 D DT 4 1_555 0.809 0.791 3.421 3.385 0.178 37.312 1.207 -0.790 3.482 0.278 -5.277 37.461 13 CC_DC13DA14:DT4DG5_DD C 13 ? D 5 ? C 14 ? D 4 ? 1 C DA 14 1_555 D DT 4 1_555 C DA 15 1_555 D BRU 3 1_555 -1.261 1.143 3.103 -7.874 0.778 33.422 1.816 0.906 3.331 1.329 13.458 34.319 14 CC_DA14DA15:BRU3DT4_DD C 14 ? D 4 ? C 15 ? D 3 ? 1 C DA 15 1_555 D BRU 3 1_555 C DC 16 1_555 D DG 2 1_555 -0.606 1.017 3.763 1.953 -0.156 39.484 1.525 1.159 3.726 -0.231 -2.889 39.531 15 CC_DA15DC16:DG2BRU3_DD C 15 ? D 3 ? C 16 ? D 2 ? 1 C DC 16 1_555 D DG 2 1_555 C DA 17 1_555 D DT 1 1_555 0.916 0.431 3.145 -4.331 -7.358 33.894 1.755 -2.138 2.857 -12.379 7.286 34.922 16 CC_DC16DA17:DT1DG2_DD C 16 ? D 2 ? C 17 ? D 1 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute of Arthritis and Musculoskeletal and Skin Diseases (NIH/NIAMS)' 'United States' AR055685 1 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' GM124165 2 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 1,2-ETHANEDIOL EDO 5 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #