HEADER TRANSFERASE/TRANSFERASE INHIBITOR 27-SEP-22 8EME TITLE EGFR(T790M/V948R) IN COMPLEX WITH ZNL-0056 COMPND MOL_ID: 1; COMPND 2 MOLECULE: EPIDERMAL GROWTH FACTOR RECEPTOR; COMPND 3 CHAIN: B, A; COMPND 4 FRAGMENT: KINASE DOMAIN, RESIDUES 695-1022; COMPND 5 SYNONYM: PROTO-ONCOGENE C-ERBB-1,RECEPTOR TYROSINE-PROTEIN KINASE COMPND 6 ERBB-1; COMPND 7 EC: 2.7.10.1; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: EGFR, ERBB, ERBB1, HER1; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS EGFR, KINASE, COVALENT, INHIBITOR, TRANSFERASE, TRANSFERASE- KEYWDS 2 TRANSFERASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR T.S.BEYETT,M.J.ECK REVDAT 2 06-MAR-24 8EME 1 JRNL REVDAT 1 18-OCT-23 8EME 0 JRNL AUTH Z.LI,J.JIANG,S.B.FICARRO,T.S.BEYETT,C.TO,I.TAVARES,Y.ZHU, JRNL AUTH 2 J.LI,M.J.ECK,P.A.JANNE,J.A.MARTO,T.ZHANG,J.CHE,N.S.GRAY JRNL TITL MOLECULAR BIDENTS WITH TWO ELECTROPHILIC WARHEADS AS A NEW JRNL TITL 2 PHARMACOLOGICAL MODALITY JRNL REF ACS CENT.SCI. 2024 JRNL REFN ESSN 2374-7951 JRNL DOI 10.1021/ACSCENTSCI.3C01245 REMARK 2 REMARK 2 RESOLUTION. 3.32 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.32 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 8634 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.285 REMARK 3 R VALUE (WORKING SET) : 0.283 REMARK 3 FREE R VALUE : 0.318 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.760 REMARK 3 FREE R VALUE TEST SET COUNT : 497 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 50.0000 - 5.2700 0.99 2066 125 0.2464 0.2683 REMARK 3 2 5.2700 - 4.1800 0.98 1986 145 0.2921 0.3337 REMARK 3 3 4.1800 - 3.6500 0.99 2053 109 0.3101 0.3591 REMARK 3 4 3.6500 - 3.3200 0.99 2032 118 0.3311 0.3786 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.540 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 35.990 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 87.37 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 101.3 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 15 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 702 THROUGH 768 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.9256 -36.5740 18.9131 REMARK 3 T TENSOR REMARK 3 T11: 0.6097 T22: 1.1240 REMARK 3 T33: 0.7251 T12: -0.2831 REMARK 3 T13: 0.1740 T23: 0.2230 REMARK 3 L TENSOR REMARK 3 L11: 1.3022 L22: 1.0831 REMARK 3 L33: 2.9716 L12: -1.2576 REMARK 3 L13: 1.0181 L23: -0.9059 REMARK 3 S TENSOR REMARK 3 S11: 0.3469 S12: 0.5696 S13: -0.2343 REMARK 3 S21: -0.6037 S22: -0.8213 S23: -0.1875 REMARK 3 S31: 1.3942 S32: -0.5035 S33: 0.4591 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 769 THROUGH 853 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.9271 -23.2452 9.3360 REMARK 3 T TENSOR REMARK 3 T11: 0.6234 T22: 0.2447 REMARK 3 T33: 0.3704 T12: -0.0773 REMARK 3 T13: -0.0579 T23: -0.1015 REMARK 3 L TENSOR REMARK 3 L11: 3.6061 L22: 1.7191 REMARK 3 L33: 3.5945 L12: -0.4555 REMARK 3 L13: -0.0173 L23: 0.5925 REMARK 3 S TENSOR REMARK 3 S11: -0.5682 S12: 0.1040 S13: 0.3818 REMARK 3 S21: 0.0648 S22: 0.3569 S23: -0.2075 REMARK 3 S31: -0.5004 S32: -0.4125 S33: 0.2327 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 854 THROUGH 919 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.4604 -27.4100 -5.7859 REMARK 3 T TENSOR REMARK 3 T11: 0.9074 T22: 0.4135 REMARK 3 T33: 0.4354 T12: -0.1144 REMARK 3 T13: -0.0478 T23: 0.3043 REMARK 3 L TENSOR REMARK 3 L11: 4.5359 L22: 3.6726 REMARK 3 L33: 5.4929 L12: -0.5196 REMARK 3 L13: 0.8803 L23: 0.7576 REMARK 3 S TENSOR REMARK 3 S11: -0.5163 S12: -0.0481 S13: 0.0142 REMARK 3 S21: -1.2585 S22: 0.1288 S23: -0.0181 REMARK 3 S31: 0.0934 S32: 0.4622 S33: 0.2692 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 920 THROUGH 978 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.9450 -18.5575 -8.4362 REMARK 3 T TENSOR REMARK 3 T11: 1.2947 T22: 0.5562 REMARK 3 T33: 0.4345 T12: -0.2553 REMARK 3 T13: -0.0394 T23: -0.0442 REMARK 3 L TENSOR REMARK 3 L11: 1.7155 L22: 1.6366 REMARK 3 L33: 3.5731 L12: -0.0122 REMARK 3 L13: 0.9400 L23: 1.5035 REMARK 3 S TENSOR REMARK 3 S11: -0.6111 S12: 0.5659 S13: 0.1231 REMARK 3 S21: -2.1548 S22: 0.0224 S23: -0.1721 REMARK 3 S31: -0.7167 S32: 1.0196 S33: 0.0522 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 979 THROUGH 1007 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.7016 -9.1917 15.8364 REMARK 3 T TENSOR REMARK 3 T11: 0.3557 T22: 0.4907 REMARK 3 T33: 0.6649 T12: -0.7773 REMARK 3 T13: -0.3469 T23: -0.5739 REMARK 3 L TENSOR REMARK 3 L11: 0.3083 L22: 0.2944 REMARK 3 L33: 0.7160 L12: -0.1222 REMARK 3 L13: 0.0098 L23: -0.3851 REMARK 3 S TENSOR REMARK 3 S11: -0.5966 S12: -0.2637 S13: 0.1546 REMARK 3 S21: -0.4029 S22: 0.0978 S23: 0.0229 REMARK 3 S31: -0.4846 S32: -0.0605 S33: -0.0147 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 700 THROUGH 716 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.7684 -3.1919 26.5983 REMARK 3 T TENSOR REMARK 3 T11: 0.8433 T22: 1.5958 REMARK 3 T33: 1.2144 T12: 0.5855 REMARK 3 T13: -0.0474 T23: -0.5865 REMARK 3 L TENSOR REMARK 3 L11: 0.2714 L22: 4.3489 REMARK 3 L33: 1.3878 L12: -0.7689 REMARK 3 L13: -0.1832 L23: -0.9169 REMARK 3 S TENSOR REMARK 3 S11: 0.5277 S12: -0.6732 S13: 1.0258 REMARK 3 S21: -0.9189 S22: -0.4422 S23: 1.2190 REMARK 3 S31: -0.3638 S32: -0.3131 S33: -0.2276 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 717 THROUGH 736 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.0964 -9.7849 31.3244 REMARK 3 T TENSOR REMARK 3 T11: 0.6821 T22: 1.7967 REMARK 3 T33: 0.9252 T12: -0.1082 REMARK 3 T13: -0.0255 T23: -0.6885 REMARK 3 L TENSOR REMARK 3 L11: 2.5439 L22: 1.2750 REMARK 3 L33: 2.5867 L12: 0.1217 REMARK 3 L13: -0.8824 L23: 1.4441 REMARK 3 S TENSOR REMARK 3 S11: 0.4075 S12: -0.2935 S13: 0.9111 REMARK 3 S21: 0.0778 S22: -0.0108 S23: 0.4116 REMARK 3 S31: -0.6137 S32: -0.4203 S33: 0.0698 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 737 THROUGH 768 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.2337 -1.8108 32.8311 REMARK 3 T TENSOR REMARK 3 T11: 0.0930 T22: 1.2704 REMARK 3 T33: 1.1744 T12: 0.1925 REMARK 3 T13: 0.0369 T23: -0.3170 REMARK 3 L TENSOR REMARK 3 L11: 3.9819 L22: 0.7660 REMARK 3 L33: 1.8748 L12: 0.7049 REMARK 3 L13: -1.2825 L23: -1.1762 REMARK 3 S TENSOR REMARK 3 S11: 0.1218 S12: -0.9802 S13: 1.0955 REMARK 3 S21: 0.4419 S22: -0.4961 S23: 0.4869 REMARK 3 S31: -0.6968 S32: 0.8392 S33: 0.1225 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 769 THROUGH 786 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.8315 -5.6125 33.7310 REMARK 3 T TENSOR REMARK 3 T11: 0.8746 T22: 1.5227 REMARK 3 T33: 0.2520 T12: -0.0894 REMARK 3 T13: -0.1439 T23: -0.1881 REMARK 3 L TENSOR REMARK 3 L11: 2.2856 L22: 5.0043 REMARK 3 L33: 6.9931 L12: 1.2524 REMARK 3 L13: 2.6959 L23: -2.5628 REMARK 3 S TENSOR REMARK 3 S11: 0.0762 S12: -0.3761 S13: 0.2772 REMARK 3 S21: -0.5205 S22: -1.2331 S23: 0.1885 REMARK 3 S31: -0.7387 S32: -0.5238 S33: 0.5628 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 787 THROUGH 810 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.6431 -21.5302 41.5181 REMARK 3 T TENSOR REMARK 3 T11: 0.4006 T22: 1.6310 REMARK 3 T33: 0.6276 T12: -0.3612 REMARK 3 T13: -0.0924 T23: -0.5642 REMARK 3 L TENSOR REMARK 3 L11: 2.8438 L22: 0.6798 REMARK 3 L33: 1.6224 L12: 1.3144 REMARK 3 L13: -0.4736 L23: -0.4250 REMARK 3 S TENSOR REMARK 3 S11: 0.5995 S12: -0.5540 S13: 0.5781 REMARK 3 S21: 0.3076 S22: -0.1414 S23: 0.6609 REMARK 3 S31: 0.0007 S32: -0.8092 S33: 0.3762 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 811 THROUGH 830 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.2161 -19.8249 44.1924 REMARK 3 T TENSOR REMARK 3 T11: 0.6526 T22: 2.0679 REMARK 3 T33: 0.5447 T12: -0.5819 REMARK 3 T13: -0.1623 T23: 0.3233 REMARK 3 L TENSOR REMARK 3 L11: 3.8811 L22: 4.9767 REMARK 3 L33: 4.0264 L12: -0.5147 REMARK 3 L13: -2.6210 L23: -1.7344 REMARK 3 S TENSOR REMARK 3 S11: 1.0694 S12: 0.1193 S13: 0.6324 REMARK 3 S21: 0.7343 S22: -0.9358 S23: -0.5093 REMARK 3 S31: -0.2498 S32: -0.0694 S33: 0.4929 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 831 THROUGH 892 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.4189 -9.7817 48.6289 REMARK 3 T TENSOR REMARK 3 T11: 1.0901 T22: 1.5587 REMARK 3 T33: 0.7635 T12: -0.6352 REMARK 3 T13: -0.0103 T23: -0.0414 REMARK 3 L TENSOR REMARK 3 L11: 1.4745 L22: 4.4261 REMARK 3 L33: 2.0946 L12: -2.0171 REMARK 3 L13: -0.5171 L23: -0.6439 REMARK 3 S TENSOR REMARK 3 S11: 0.6926 S12: -0.1033 S13: 0.2296 REMARK 3 S21: 1.1257 S22: -0.7151 S23: 0.2458 REMARK 3 S31: 0.0294 S32: -0.4207 S33: 0.1145 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 893 THROUGH 960 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.1275 -16.7283 60.0760 REMARK 3 T TENSOR REMARK 3 T11: 1.7260 T22: 2.1656 REMARK 3 T33: -0.3649 T12: -1.2399 REMARK 3 T13: -0.2290 T23: -0.1836 REMARK 3 L TENSOR REMARK 3 L11: 0.2167 L22: 0.7683 REMARK 3 L33: 1.4912 L12: -0.2747 REMARK 3 L13: 0.2202 L23: 0.3032 REMARK 3 S TENSOR REMARK 3 S11: -0.0839 S12: 0.2293 S13: 0.1657 REMARK 3 S21: 1.2670 S22: -0.3835 S23: -0.3857 REMARK 3 S31: -0.2300 S32: 0.2673 S33: -0.0353 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 961 THROUGH 978 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.4185 -25.9613 49.8107 REMARK 3 T TENSOR REMARK 3 T11: 1.3565 T22: 2.1087 REMARK 3 T33: 0.8400 T12: -0.9628 REMARK 3 T13: -0.5910 T23: 0.4503 REMARK 3 L TENSOR REMARK 3 L11: 0.0148 L22: 3.2074 REMARK 3 L33: 1.6727 L12: -0.1514 REMARK 3 L13: -0.0479 L23: -0.2589 REMARK 3 S TENSOR REMARK 3 S11: 0.6700 S12: -0.4559 S13: -0.3944 REMARK 3 S21: 0.7787 S22: -0.2278 S23: -0.3770 REMARK 3 S31: 1.0909 S32: -0.0901 S33: -0.2469 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 979 THROUGH 1007 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.3234 -28.1926 30.5218 REMARK 3 T TENSOR REMARK 3 T11: 0.8075 T22: 1.1756 REMARK 3 T33: 0.5899 T12: -0.2086 REMARK 3 T13: 0.1046 T23: 0.0320 REMARK 3 L TENSOR REMARK 3 L11: 2.1809 L22: 1.3350 REMARK 3 L33: 3.9535 L12: 0.6734 REMARK 3 L13: 2.4572 L23: 1.9238 REMARK 3 S TENSOR REMARK 3 S11: 0.9985 S12: -0.3351 S13: -0.5891 REMARK 3 S21: 0.7406 S22: -0.3299 S23: -0.9351 REMARK 3 S31: -0.3987 S32: -0.8314 S33: -0.5525 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND RESID 702 THROUGH 1007) REMARK 3 SELECTION : (CHAIN B AND (RESID 702 THROUGH 747 OR REMARK 3 RESID 755 THROUGH 832 OR RESID 836 REMARK 3 THROUGH 856 OR RESID 878 THROUGH 979 OR REMARK 3 RESID 990 THROUGH 1007)) REMARK 3 ATOM PAIRS NUMBER : 2478 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8EME COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-SEP-22. REMARK 100 THE DEPOSITION ID IS D_1000268792. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-FEB-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8682 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.320 REMARK 200 RESOLUTION RANGE LOW (A) : 64.970 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 3.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.32 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : 3.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6DUK REMARK 200 REMARK 200 REMARK: PLATE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.73 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BIS-TRIS PH 5.7, 25-30% (W/V) REMARK 280 PEG 3350, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 49.99600 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2920 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26690 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY B 692 REMARK 465 SER B 693 REMARK 465 THR B 694 REMARK 465 SER B 695 REMARK 465 GLY B 696 REMARK 465 GLU B 697 REMARK 465 ALA B 698 REMARK 465 PRO B 699 REMARK 465 ASN B 700 REMARK 465 GLN B 701 REMARK 465 LEU B 858 REMARK 465 ALA B 859 REMARK 465 LYS B 860 REMARK 465 LEU B 861 REMARK 465 LEU B 862 REMARK 465 GLY B 863 REMARK 465 ALA B 864 REMARK 465 GLU B 865 REMARK 465 GLU B 866 REMARK 465 LYS B 867 REMARK 465 GLU B 868 REMARK 465 TYR B 869 REMARK 465 HIS B 870 REMARK 465 ALA B 871 REMARK 465 GLU B 872 REMARK 465 GLY B 873 REMARK 465 GLY B 874 REMARK 465 LYS B 875 REMARK 465 VAL B 876 REMARK 465 ASP B 984 REMARK 465 GLU B 985 REMARK 465 ARG B 986 REMARK 465 MET B 987 REMARK 465 HIS B 988 REMARK 465 ASP B 1008 REMARK 465 ASP B 1009 REMARK 465 VAL B 1010 REMARK 465 VAL B 1011 REMARK 465 ASP B 1012 REMARK 465 ALA B 1013 REMARK 465 ASP B 1014 REMARK 465 GLU B 1015 REMARK 465 TYR B 1016 REMARK 465 LEU B 1017 REMARK 465 ILE B 1018 REMARK 465 PRO B 1019 REMARK 465 GLN B 1020 REMARK 465 GLN B 1021 REMARK 465 GLY B 1022 REMARK 465 GLY A 692 REMARK 465 SER A 693 REMARK 465 THR A 694 REMARK 465 SER A 695 REMARK 465 GLY A 696 REMARK 465 GLU A 697 REMARK 465 ALA A 698 REMARK 465 PRO A 699 REMARK 465 ARG A 748 REMARK 465 GLU A 749 REMARK 465 ALA A 750 REMARK 465 THR A 751 REMARK 465 SER A 752 REMARK 465 PRO A 753 REMARK 465 LYS A 754 REMARK 465 LEU A 833 REMARK 465 VAL A 834 REMARK 465 HIS A 835 REMARK 465 GLY A 857 REMARK 465 LEU A 858 REMARK 465 ALA A 859 REMARK 465 LYS A 860 REMARK 465 LEU A 861 REMARK 465 LEU A 862 REMARK 465 GLY A 863 REMARK 465 ALA A 864 REMARK 465 GLU A 865 REMARK 465 GLU A 866 REMARK 465 LYS A 867 REMARK 465 GLU A 868 REMARK 465 TYR A 869 REMARK 465 HIS A 870 REMARK 465 ALA A 871 REMARK 465 GLU A 872 REMARK 465 GLY A 873 REMARK 465 GLY A 874 REMARK 465 LYS A 875 REMARK 465 VAL A 876 REMARK 465 PRO A 877 REMARK 465 VAL A 980 REMARK 465 ILE A 981 REMARK 465 GLN A 982 REMARK 465 GLY A 983 REMARK 465 ASP A 984 REMARK 465 GLU A 985 REMARK 465 ARG A 986 REMARK 465 MET A 987 REMARK 465 HIS A 988 REMARK 465 LEU A 989 REMARK 465 ASP A 1008 REMARK 465 ASP A 1009 REMARK 465 VAL A 1010 REMARK 465 VAL A 1011 REMARK 465 ASP A 1012 REMARK 465 ALA A 1013 REMARK 465 ASP A 1014 REMARK 465 GLU A 1015 REMARK 465 TYR A 1016 REMARK 465 LEU A 1017 REMARK 465 ILE A 1018 REMARK 465 PRO A 1019 REMARK 465 GLN A 1020 REMARK 465 GLN A 1021 REMARK 465 GLY A 1022 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS B 737 CG CD CE NZ REMARK 470 LYS A 737 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA B 722 -151.39 54.75 REMARK 500 LEU B 747 -179.05 -68.92 REMARK 500 ARG B 748 -179.45 -69.48 REMARK 500 THR B 751 -147.25 -134.08 REMARK 500 THR B 783 -165.00 -109.57 REMARK 500 LYS B 806 5.11 -63.13 REMARK 500 ASP B 807 -56.31 -121.71 REMARK 500 ASN B 808 35.74 -77.79 REMARK 500 ARG B 836 -20.06 73.04 REMARK 500 ASP B 855 69.02 65.13 REMARK 500 HIS B 888 54.71 -145.94 REMARK 500 SER B 921 -3.52 -56.12 REMARK 500 PRO B 990 135.63 -28.58 REMARK 500 SER B 991 151.42 -44.56 REMARK 500 ALA A 702 34.86 -90.31 REMARK 500 ARG A 705 24.40 179.65 REMARK 500 LEU A 707 -105.35 175.47 REMARK 500 LYS A 708 99.37 13.85 REMARK 500 THR A 710 -1.12 -55.74 REMARK 500 TYR A 727 -127.83 45.02 REMARK 500 LYS A 728 -141.45 -166.74 REMARK 500 THR A 783 -96.21 -118.39 REMARK 500 SER A 784 -82.84 -59.40 REMARK 500 VAL A 786 91.23 0.45 REMARK 500 LYS A 806 8.02 -65.10 REMARK 500 ASN A 808 37.39 -79.78 REMARK 500 ASP A 837 -98.13 -169.18 REMARK 500 LEU A 838 127.54 65.70 REMARK 500 PRO A 848 -5.17 -59.10 REMARK 500 ASP A 855 119.38 64.53 REMARK 500 HIS A 888 59.79 -149.37 REMARK 500 ALA A 920 -137.83 35.99 REMARK 500 GLU A 922 -26.55 179.69 REMARK 500 GLU A 931 33.02 -97.00 REMARK 500 ARG A 932 173.69 74.64 REMARK 500 REMARK 500 REMARK: NULL DBREF 8EME B 695 1022 UNP P00533 EGFR_HUMAN 695 1022 DBREF 8EME A 695 1022 UNP P00533 EGFR_HUMAN 695 1022 SEQADV 8EME GLY B 692 UNP P00533 EXPRESSION TAG SEQADV 8EME SER B 693 UNP P00533 EXPRESSION TAG SEQADV 8EME THR B 694 UNP P00533 EXPRESSION TAG SEQADV 8EME MET B 790 UNP P00533 THR 790 ENGINEERED MUTATION SEQADV 8EME ARG B 948 UNP P00533 VAL 948 ENGINEERED MUTATION SEQADV 8EME GLY A 692 UNP P00533 EXPRESSION TAG SEQADV 8EME SER A 693 UNP P00533 EXPRESSION TAG SEQADV 8EME THR A 694 UNP P00533 EXPRESSION TAG SEQADV 8EME MET A 790 UNP P00533 THR 790 ENGINEERED MUTATION SEQADV 8EME ARG A 948 UNP P00533 VAL 948 ENGINEERED MUTATION SEQRES 1 B 331 GLY SER THR SER GLY GLU ALA PRO ASN GLN ALA LEU LEU SEQRES 2 B 331 ARG ILE LEU LYS GLU THR GLU PHE LYS LYS ILE LYS VAL SEQRES 3 B 331 LEU GLY SER GLY ALA PHE GLY THR VAL TYR LYS GLY LEU SEQRES 4 B 331 TRP ILE PRO GLU GLY GLU LYS VAL LYS ILE PRO VAL ALA SEQRES 5 B 331 ILE LYS GLU LEU ARG GLU ALA THR SER PRO LYS ALA ASN SEQRES 6 B 331 LYS GLU ILE LEU ASP GLU ALA TYR VAL MET ALA SER VAL SEQRES 7 B 331 ASP ASN PRO HIS VAL CYS ARG LEU LEU GLY ILE CYS LEU SEQRES 8 B 331 THR SER THR VAL GLN LEU ILE MET GLN LEU MET PRO PHE SEQRES 9 B 331 GLY CYS LEU LEU ASP TYR VAL ARG GLU HIS LYS ASP ASN SEQRES 10 B 331 ILE GLY SER GLN TYR LEU LEU ASN TRP CYS VAL GLN ILE SEQRES 11 B 331 ALA LYS GLY MET ASN TYR LEU GLU ASP ARG ARG LEU VAL SEQRES 12 B 331 HIS ARG ASP LEU ALA ALA ARG ASN VAL LEU VAL LYS THR SEQRES 13 B 331 PRO GLN HIS VAL LYS ILE THR ASP PHE GLY LEU ALA LYS SEQRES 14 B 331 LEU LEU GLY ALA GLU GLU LYS GLU TYR HIS ALA GLU GLY SEQRES 15 B 331 GLY LYS VAL PRO ILE LYS TRP MET ALA LEU GLU SER ILE SEQRES 16 B 331 LEU HIS ARG ILE TYR THR HIS GLN SER ASP VAL TRP SER SEQRES 17 B 331 TYR GLY VAL THR VAL TRP GLU LEU MET THR PHE GLY SER SEQRES 18 B 331 LYS PRO TYR ASP GLY ILE PRO ALA SER GLU ILE SER SER SEQRES 19 B 331 ILE LEU GLU LYS GLY GLU ARG LEU PRO GLN PRO PRO ILE SEQRES 20 B 331 CYS THR ILE ASP VAL TYR MET ILE MET ARG LYS CYS TRP SEQRES 21 B 331 MET ILE ASP ALA ASP SER ARG PRO LYS PHE ARG GLU LEU SEQRES 22 B 331 ILE ILE GLU PHE SER LYS MET ALA ARG ASP PRO GLN ARG SEQRES 23 B 331 TYR LEU VAL ILE GLN GLY ASP GLU ARG MET HIS LEU PRO SEQRES 24 B 331 SER PRO THR ASP SER ASN PHE TYR ARG ALA LEU MET ASP SEQRES 25 B 331 GLU GLU ASP MET ASP ASP VAL VAL ASP ALA ASP GLU TYR SEQRES 26 B 331 LEU ILE PRO GLN GLN GLY SEQRES 1 A 331 GLY SER THR SER GLY GLU ALA PRO ASN GLN ALA LEU LEU SEQRES 2 A 331 ARG ILE LEU LYS GLU THR GLU PHE LYS LYS ILE LYS VAL SEQRES 3 A 331 LEU GLY SER GLY ALA PHE GLY THR VAL TYR LYS GLY LEU SEQRES 4 A 331 TRP ILE PRO GLU GLY GLU LYS VAL LYS ILE PRO VAL ALA SEQRES 5 A 331 ILE LYS GLU LEU ARG GLU ALA THR SER PRO LYS ALA ASN SEQRES 6 A 331 LYS GLU ILE LEU ASP GLU ALA TYR VAL MET ALA SER VAL SEQRES 7 A 331 ASP ASN PRO HIS VAL CYS ARG LEU LEU GLY ILE CYS LEU SEQRES 8 A 331 THR SER THR VAL GLN LEU ILE MET GLN LEU MET PRO PHE SEQRES 9 A 331 GLY CYS LEU LEU ASP TYR VAL ARG GLU HIS LYS ASP ASN SEQRES 10 A 331 ILE GLY SER GLN TYR LEU LEU ASN TRP CYS VAL GLN ILE SEQRES 11 A 331 ALA LYS GLY MET ASN TYR LEU GLU ASP ARG ARG LEU VAL SEQRES 12 A 331 HIS ARG ASP LEU ALA ALA ARG ASN VAL LEU VAL LYS THR SEQRES 13 A 331 PRO GLN HIS VAL LYS ILE THR ASP PHE GLY LEU ALA LYS SEQRES 14 A 331 LEU LEU GLY ALA GLU GLU LYS GLU TYR HIS ALA GLU GLY SEQRES 15 A 331 GLY LYS VAL PRO ILE LYS TRP MET ALA LEU GLU SER ILE SEQRES 16 A 331 LEU HIS ARG ILE TYR THR HIS GLN SER ASP VAL TRP SER SEQRES 17 A 331 TYR GLY VAL THR VAL TRP GLU LEU MET THR PHE GLY SER SEQRES 18 A 331 LYS PRO TYR ASP GLY ILE PRO ALA SER GLU ILE SER SER SEQRES 19 A 331 ILE LEU GLU LYS GLY GLU ARG LEU PRO GLN PRO PRO ILE SEQRES 20 A 331 CYS THR ILE ASP VAL TYR MET ILE MET ARG LYS CYS TRP SEQRES 21 A 331 MET ILE ASP ALA ASP SER ARG PRO LYS PHE ARG GLU LEU SEQRES 22 A 331 ILE ILE GLU PHE SER LYS MET ALA ARG ASP PRO GLN ARG SEQRES 23 A 331 TYR LEU VAL ILE GLN GLY ASP GLU ARG MET HIS LEU PRO SEQRES 24 A 331 SER PRO THR ASP SER ASN PHE TYR ARG ALA LEU MET ASP SEQRES 25 A 331 GLU GLU ASP MET ASP ASP VAL VAL ASP ALA ASP GLU TYR SEQRES 26 A 331 LEU ILE PRO GLN GLN GLY HET ZNL B1101 34 HETNAM ZNL N-{7-METHYL-1-[(3S)-1-(PROP-2-ENOYL)AZEPAN-3-YL]-1H- HETNAM 2 ZNL BENZIMIDAZOL-2-YL}-5-(PROP-2-ENAMIDO)THIOPHENE-3- HETNAM 3 ZNL CARBOXAMIDE FORMUL 3 ZNL C25 H27 N5 O3 S HELIX 1 AA1 LYS B 708 THR B 710 5 3 HELIX 2 AA2 LYS B 754 ALA B 767 1 14 HELIX 3 AA3 CYS B 797 HIS B 805 1 9 HELIX 4 AA4 GLY B 810 ARG B 831 1 22 HELIX 5 AA5 ALA B 839 ARG B 841 5 3 HELIX 6 AA6 PRO B 877 MET B 881 5 5 HELIX 7 AA7 ALA B 882 ARG B 889 1 8 HELIX 8 AA8 THR B 892 THR B 909 1 18 HELIX 9 AA9 PRO B 919 SER B 921 5 3 HELIX 10 AB1 GLU B 922 GLU B 928 1 7 HELIX 11 AB2 THR B 940 CYS B 950 1 11 HELIX 12 AB3 ASP B 954 ARG B 958 5 5 HELIX 13 AB4 LYS B 960 ARG B 973 1 14 HELIX 14 AB5 ASP B 974 LEU B 979 1 6 HELIX 15 AB6 SER B 991 ASP B 1003 1 13 HELIX 16 AB7 ASN A 700 LEU A 704 5 5 HELIX 17 AB8 LYS A 708 THR A 710 5 3 HELIX 18 AB9 ASN A 756 ALA A 767 1 12 HELIX 19 AC1 CYS A 797 HIS A 805 1 9 HELIX 20 AC2 GLY A 810 ARG A 831 1 22 HELIX 21 AC3 ALA A 882 ARG A 889 1 8 HELIX 22 AC4 THR A 892 THR A 909 1 18 HELIX 23 AC5 GLU A 922 GLY A 930 1 9 HELIX 24 AC6 THR A 940 CYS A 950 1 11 HELIX 25 AC7 ASP A 954 ARG A 958 5 5 HELIX 26 AC8 LYS A 960 ARG A 973 1 14 HELIX 27 AC9 ASP A 974 LEU A 979 1 6 HELIX 28 AD1 SER A 991 ASP A 1003 1 13 SHEET 1 AA1 6 ARG B 705 ILE B 706 0 SHEET 2 AA1 6 LEU B 777 CYS B 781 1 O LEU B 778 N ARG B 705 SHEET 3 AA1 6 GLN B 787 MET B 790 -1 O GLN B 787 N CYS B 781 SHEET 4 AA1 6 ILE B 740 LEU B 747 -1 N ALA B 743 O MET B 790 SHEET 5 AA1 6 GLY B 724 TRP B 731 -1 N TYR B 727 O ILE B 744 SHEET 6 AA1 6 PHE B 712 LYS B 714 -1 N LYS B 713 O LEU B 730 SHEET 1 AA2 6 ARG B 705 ILE B 706 0 SHEET 2 AA2 6 LEU B 777 CYS B 781 1 O LEU B 778 N ARG B 705 SHEET 3 AA2 6 GLN B 787 MET B 790 -1 O GLN B 787 N CYS B 781 SHEET 4 AA2 6 ILE B 740 LEU B 747 -1 N ALA B 743 O MET B 790 SHEET 5 AA2 6 GLY B 724 TRP B 731 -1 N TYR B 727 O ILE B 744 SHEET 6 AA2 6 GLY B 719 GLY B 721 -1 N GLY B 719 O VAL B 726 SHEET 1 AA3 2 VAL B 843 THR B 847 0 SHEET 2 AA3 2 HIS B 850 ILE B 853 -1 O LYS B 852 N LEU B 844 SHEET 1 AA4 5 PHE A 712 LYS A 713 0 SHEET 2 AA4 5 LEU A 730 TRP A 731 -1 O LEU A 730 N LYS A 713 SHEET 3 AA4 5 ILE A 740 GLU A 746 -1 O ILE A 740 N TRP A 731 SHEET 4 AA4 5 GLN A 787 GLN A 791 -1 O MET A 790 N ALA A 743 SHEET 5 AA4 5 GLY A 779 CYS A 781 -1 N GLY A 779 O ILE A 789 SHEET 1 AA5 2 VAL A 843 THR A 847 0 SHEET 2 AA5 2 HIS A 850 ILE A 853 -1 O LYS A 852 N LEU A 844 LINK SG CYS B 775 C26 ZNL B1101 1555 1555 1.88 LINK SG CYS B 797 C13 ZNL B1101 1555 1555 1.77 CRYST1 34.874 99.992 87.023 90.00 100.80 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.028675 0.000000 0.005470 0.00000 SCALE2 0.000000 0.010001 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011698 0.00000