HEADER IMMUNE SYSTEM 27-SEP-22 8EMF TITLE CRYSTAL STRUCTURE OF A HLA-B*35:01-NP6 EPITOPE FROM 1977 H1N1 TITLE 2 INFLUENZA STRAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: MHC CLASS I ANTIGEN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: BETA-2-MICROGLOBULIN; COMPND 7 CHAIN: B; COMPND 8 FRAGMENT: UNP RESIDUES 21-119; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: NUCLEOPROTEIN NP6 EPITOPE; COMPND 12 CHAIN: C; COMPND 13 SYNONYM: NUCLEOCAPSID PROTEIN,PROTEIN N; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 VARIANT: B35*01; SOURCE 6 GENE: HLA-B; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PLASMID; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_COMMON: HUMAN; SOURCE 13 ORGANISM_TAXID: 9606; SOURCE 14 GENE: B2M, CDABP0092, HDCMA22P; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 16 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 17 EXPRESSION_SYSTEM_PLASMID: PLASMID; SOURCE 18 MOL_ID: 3; SOURCE 19 SYNTHETIC: YES; SOURCE 20 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS (STRAIN A/1977/H1N1); SOURCE 21 ORGANISM_TAXID: 11320 KEYWDS HLA B*3501, NP418 EPITOPE, T CELL IMMUNITY, GLYCOPROTEIN, HOST-VIRUS KEYWDS 2 INTERACTION, IMMUNE RESPONSE, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR D.R.LITTLER,J.ROSSJOHN REVDAT 1 27-MAR-24 8EMF 0 JRNL AUTH S.QUINONES-PARRA,D.R.LITTLER,J.ROSSJOHN,K.KEDZIERSKA JRNL TITL MOLECULAR DETERMINANTS OF CROSS-STRAIN INFLUENZA A VIRUS JRNL TITL 2 RECOGNITION BY T-CELL RECEPTORS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.90 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.359 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 42587 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.179 REMARK 3 FREE R VALUE : 0.203 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.044 REMARK 3 FREE R VALUE TEST SET COUNT : 2148 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 25.8000 - 4.4441 1.00 2922 139 0.1622 0.1484 REMARK 3 2 4.4441 - 3.5302 1.00 2754 155 0.1471 0.1537 REMARK 3 3 3.5302 - 3.0848 1.00 2728 148 0.1644 0.2097 REMARK 3 4 3.0848 - 2.8031 1.00 2709 139 0.1805 0.2461 REMARK 3 5 2.8031 - 2.6024 1.00 2706 147 0.1914 0.2474 REMARK 3 6 2.6024 - 2.4491 1.00 2669 178 0.1852 0.2217 REMARK 3 7 2.4491 - 2.3265 1.00 2693 126 0.1826 0.2080 REMARK 3 8 2.3265 - 2.2253 1.00 2694 138 0.1846 0.2032 REMARK 3 9 2.2253 - 2.1397 1.00 2658 148 0.1857 0.1993 REMARK 3 10 2.1397 - 2.0659 1.00 2677 142 0.1964 0.2101 REMARK 3 11 2.0659 - 2.0013 1.00 2697 122 0.1942 0.2277 REMARK 3 12 2.0013 - 1.9441 1.00 2637 150 0.1995 0.2364 REMARK 3 13 1.9441 - 1.8930 1.00 2652 142 0.2141 0.2351 REMARK 3 14 1.8930 - 1.8468 1.00 2672 138 0.2280 0.2680 REMARK 3 15 1.8468 - 1.8100 0.96 2571 136 0.2677 0.2755 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.181 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.858 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 18.12 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.72 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 3262 REMARK 3 ANGLE : 1.502 4433 REMARK 3 CHIRALITY : 0.106 453 REMARK 3 PLANARITY : 0.008 585 REMARK 3 DIHEDRAL : 18.779 1222 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 16 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 56 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.3562 -5.6003 30.3723 REMARK 3 T TENSOR REMARK 3 T11: 0.1092 T22: 0.1060 REMARK 3 T33: 0.0799 T12: -0.0035 REMARK 3 T13: 0.0220 T23: -0.0253 REMARK 3 L TENSOR REMARK 3 L11: 2.4437 L22: 1.3429 REMARK 3 L33: 0.6110 L12: 0.7974 REMARK 3 L13: -0.5661 L23: -0.4030 REMARK 3 S TENSOR REMARK 3 S11: 0.1186 S12: -0.1252 S13: 0.2983 REMARK 3 S21: 0.1313 S22: -0.0426 S23: 0.2029 REMARK 3 S31: -0.0654 S32: -0.0381 S33: -0.0627 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 57 THROUGH 84 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.1160 -6.5115 36.1225 REMARK 3 T TENSOR REMARK 3 T11: 0.1932 T22: 0.1515 REMARK 3 T33: -0.0174 T12: -0.0350 REMARK 3 T13: -0.0225 T23: -0.0454 REMARK 3 L TENSOR REMARK 3 L11: 3.4067 L22: 1.5129 REMARK 3 L33: 2.2055 L12: -0.3628 REMARK 3 L13: -1.7618 L23: 0.6273 REMARK 3 S TENSOR REMARK 3 S11: 0.2074 S12: -0.4871 S13: 0.1418 REMARK 3 S21: 0.6071 S22: -0.2843 S23: -0.5302 REMARK 3 S31: -0.2356 S32: 0.1208 S33: -0.1151 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 85 THROUGH 118 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.7619 -15.8644 25.2770 REMARK 3 T TENSOR REMARK 3 T11: 0.0828 T22: 0.0655 REMARK 3 T33: 0.0418 T12: 0.0033 REMARK 3 T13: -0.0254 T23: 0.0030 REMARK 3 L TENSOR REMARK 3 L11: 3.4657 L22: 2.4661 REMARK 3 L33: 1.2954 L12: 0.5666 REMARK 3 L13: -1.1376 L23: -0.1485 REMARK 3 S TENSOR REMARK 3 S11: -0.1455 S12: 0.0172 S13: -0.3169 REMARK 3 S21: -0.0343 S22: 0.0546 S23: -0.1429 REMARK 3 S31: 0.1587 S32: -0.0400 S33: 0.0343 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 119 THROUGH 174 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.9999 -21.2291 31.4197 REMARK 3 T TENSOR REMARK 3 T11: 0.1315 T22: 0.1050 REMARK 3 T33: 0.1517 T12: 0.0018 REMARK 3 T13: -0.0401 T23: 0.0317 REMARK 3 L TENSOR REMARK 3 L11: 1.7139 L22: 1.7059 REMARK 3 L33: 0.6193 L12: 0.5025 REMARK 3 L13: -0.3044 L23: -0.1335 REMARK 3 S TENSOR REMARK 3 S11: -0.0253 S12: -0.2070 S13: -0.3694 REMARK 3 S21: 0.1845 S22: -0.0491 S23: -0.3691 REMARK 3 S31: 0.0677 S32: 0.0399 S33: 0.0562 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 175 THROUGH 219 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.7179 -13.7157 6.2254 REMARK 3 T TENSOR REMARK 3 T11: 0.1381 T22: 0.1377 REMARK 3 T33: 0.1214 T12: -0.0259 REMARK 3 T13: -0.0351 T23: -0.0021 REMARK 3 L TENSOR REMARK 3 L11: 0.7377 L22: 0.9214 REMARK 3 L33: 2.9664 L12: -0.0228 REMARK 3 L13: 1.2523 L23: -0.2595 REMARK 3 S TENSOR REMARK 3 S11: 0.0379 S12: 0.1201 S13: 0.0174 REMARK 3 S21: -0.2307 S22: 0.1467 S23: 0.1595 REMARK 3 S31: 0.2617 S32: -0.0797 S33: -0.0412 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 220 THROUGH 276 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.6152 -16.6461 2.0068 REMARK 3 T TENSOR REMARK 3 T11: 0.2139 T22: 0.1681 REMARK 3 T33: 0.1462 T12: -0.0301 REMARK 3 T13: -0.0772 T23: -0.0077 REMARK 3 L TENSOR REMARK 3 L11: 1.1994 L22: 1.3637 REMARK 3 L33: 3.4777 L12: 0.0943 REMARK 3 L13: 1.4336 L23: 0.5946 REMARK 3 S TENSOR REMARK 3 S11: 0.1414 S12: 0.2444 S13: -0.1251 REMARK 3 S21: -0.1858 S22: 0.0542 S23: 0.1555 REMARK 3 S31: 0.5013 S32: 0.0281 S33: -0.1056 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 0 THROUGH 5 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.4280 -5.3388 10.3287 REMARK 3 T TENSOR REMARK 3 T11: 0.1915 T22: 0.2646 REMARK 3 T33: 0.1095 T12: -0.0123 REMARK 3 T13: 0.0564 T23: 0.0487 REMARK 3 L TENSOR REMARK 3 L11: 2.7054 L22: 3.2344 REMARK 3 L33: 2.8799 L12: 0.4870 REMARK 3 L13: 2.5198 L23: 1.7173 REMARK 3 S TENSOR REMARK 3 S11: -0.1221 S12: 0.3441 S13: -0.1164 REMARK 3 S21: -0.1580 S22: 0.3756 S23: -0.3384 REMARK 3 S31: 0.1003 S32: 0.1979 S33: -0.2081 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 6 THROUGH 11 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.3027 -2.1113 8.2955 REMARK 3 T TENSOR REMARK 3 T11: 0.1685 T22: 0.1162 REMARK 3 T33: 0.1089 T12: -0.0239 REMARK 3 T13: -0.0519 T23: 0.0141 REMARK 3 L TENSOR REMARK 3 L11: 7.1119 L22: 0.7158 REMARK 3 L33: 3.1343 L12: 1.1563 REMARK 3 L13: -1.8953 L23: 0.3369 REMARK 3 S TENSOR REMARK 3 S11: -0.0310 S12: 0.1275 S13: 0.1262 REMARK 3 S21: -0.2593 S22: 0.0263 S23: 0.0993 REMARK 3 S31: -0.0266 S32: -0.0286 S33: 0.0198 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 12 THROUGH 19 ) REMARK 3 ORIGIN FOR THE GROUP (A): -32.5423 2.4552 10.2854 REMARK 3 T TENSOR REMARK 3 T11: 0.1848 T22: 0.3288 REMARK 3 T33: 0.3810 T12: 0.0402 REMARK 3 T13: -0.1008 T23: 0.0378 REMARK 3 L TENSOR REMARK 3 L11: 1.2994 L22: 3.0612 REMARK 3 L33: 2.0139 L12: -1.9619 REMARK 3 L13: 1.4499 L23: -2.2179 REMARK 3 S TENSOR REMARK 3 S11: -0.0341 S12: 0.0356 S13: 0.2650 REMARK 3 S21: -0.2007 S22: 0.1335 S23: 0.8059 REMARK 3 S31: -0.1365 S32: -0.6938 S33: -0.1416 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 20 THROUGH 41 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.3768 2.5393 13.3112 REMARK 3 T TENSOR REMARK 3 T11: 0.1431 T22: 0.0924 REMARK 3 T33: 0.1556 T12: -0.0173 REMARK 3 T13: -0.0545 T23: 0.0158 REMARK 3 L TENSOR REMARK 3 L11: 1.9690 L22: 1.2613 REMARK 3 L33: 1.1888 L12: -0.6068 REMARK 3 L13: 0.1670 L23: 0.1970 REMARK 3 S TENSOR REMARK 3 S11: -0.2857 S12: 0.0645 S13: 0.2752 REMARK 3 S21: -0.0435 S22: 0.1364 S23: 0.1641 REMARK 3 S31: -0.1820 S32: -0.0048 S33: 0.1367 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 42 THROUGH 51 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.5519 12.2486 15.2735 REMARK 3 T TENSOR REMARK 3 T11: 0.3574 T22: 0.1419 REMARK 3 T33: 0.3554 T12: 0.0043 REMARK 3 T13: -0.1177 T23: -0.0160 REMARK 3 L TENSOR REMARK 3 L11: 3.0268 L22: 1.8750 REMARK 3 L33: 2.3432 L12: -1.7355 REMARK 3 L13: -0.0600 L23: -0.8398 REMARK 3 S TENSOR REMARK 3 S11: -0.1331 S12: -0.2085 S13: 0.8401 REMARK 3 S21: 0.2767 S22: -0.0936 S23: 0.1128 REMARK 3 S31: -1.0212 S32: 0.1531 S33: 0.1672 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 52 THROUGH 71 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.0697 -3.1274 17.8377 REMARK 3 T TENSOR REMARK 3 T11: 0.0837 T22: 0.0903 REMARK 3 T33: 0.0969 T12: -0.0205 REMARK 3 T13: -0.0289 T23: -0.0166 REMARK 3 L TENSOR REMARK 3 L11: 3.5311 L22: 2.0424 REMARK 3 L33: 1.4531 L12: -1.3878 REMARK 3 L13: 1.0577 L23: -0.8525 REMARK 3 S TENSOR REMARK 3 S11: -0.0639 S12: 0.0210 S13: -0.0841 REMARK 3 S21: -0.0586 S22: 0.0581 S23: 0.4527 REMARK 3 S31: -0.0876 S32: -0.0532 S33: 0.0068 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 72 THROUGH 83 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.8544 9.6235 5.2576 REMARK 3 T TENSOR REMARK 3 T11: 0.2990 T22: 0.2387 REMARK 3 T33: 0.3802 T12: -0.0096 REMARK 3 T13: -0.1292 T23: 0.1192 REMARK 3 L TENSOR REMARK 3 L11: 5.2919 L22: 1.3210 REMARK 3 L33: 1.3657 L12: -2.0147 REMARK 3 L13: 0.6234 L23: -0.1611 REMARK 3 S TENSOR REMARK 3 S11: -0.0469 S12: 0.3438 S13: 0.6650 REMARK 3 S21: -0.0831 S22: -0.0266 S23: 0.2032 REMARK 3 S31: -0.3400 S32: -0.1962 S33: 0.0673 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 84 THROUGH 90 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.4217 4.2660 6.5068 REMARK 3 T TENSOR REMARK 3 T11: 0.2475 T22: 0.3047 REMARK 3 T33: 0.2256 T12: -0.0843 REMARK 3 T13: 0.0182 T23: 0.0966 REMARK 3 L TENSOR REMARK 3 L11: 5.8754 L22: 7.4951 REMARK 3 L33: 1.7943 L12: -2.1644 REMARK 3 L13: 0.0930 L23: 0.0055 REMARK 3 S TENSOR REMARK 3 S11: -0.1383 S12: 1.4524 S13: 0.2906 REMARK 3 S21: -0.8658 S22: -0.1745 S23: -0.4700 REMARK 3 S31: -0.0857 S32: 0.3891 S33: 0.3502 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 91 THROUGH 99 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.1541 2.3556 2.3700 REMARK 3 T TENSOR REMARK 3 T11: 0.3694 T22: 0.2743 REMARK 3 T33: 0.1913 T12: -0.0618 REMARK 3 T13: -0.1250 T23: 0.1055 REMARK 3 L TENSOR REMARK 3 L11: 5.9795 L22: 1.5156 REMARK 3 L33: 1.6890 L12: 0.6167 REMARK 3 L13: 1.5299 L23: 0.2489 REMARK 3 S TENSOR REMARK 3 S11: 0.0889 S12: 0.7360 S13: -0.0347 REMARK 3 S21: -0.4724 S22: 0.1211 S23: -0.0724 REMARK 3 S31: -0.0568 S32: -0.0121 S33: -0.1546 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 1 THROUGH 9 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.1461 -14.2535 36.9143 REMARK 3 T TENSOR REMARK 3 T11: 0.2152 T22: 0.2089 REMARK 3 T33: 0.1405 T12: -0.0209 REMARK 3 T13: -0.0249 T23: 0.0461 REMARK 3 L TENSOR REMARK 3 L11: 2.6860 L22: 2.2806 REMARK 3 L33: 1.6926 L12: 0.5024 REMARK 3 L13: -2.0998 L23: -0.4915 REMARK 3 S TENSOR REMARK 3 S11: 0.1566 S12: -0.6616 S13: 0.0760 REMARK 3 S21: 0.3103 S22: -0.1598 S23: -0.4477 REMARK 3 S31: 0.0111 S32: 0.3181 S33: 0.0578 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8EMF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-SEP-22. REMARK 100 THE DEPOSITION ID IS D_1000268781. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-MAR-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95370 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42596 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 25.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 2.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.81 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.87 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3LKS REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.48 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.54 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 297K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.50000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 54.61950 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.82250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 54.61950 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.50000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.82250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4560 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18950 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -24.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 14 72.48 -154.71 REMARK 500 ASP A 29 -125.42 56.64 REMARK 500 ASP A 114 98.70 -162.37 REMARK 500 GLN A 224 40.42 -106.06 REMARK 500 ARG A 239 -28.19 94.14 REMARK 500 TRP B 60 -4.87 76.32 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 616 DISTANCE = 6.28 ANGSTROMS DBREF 8EMF A 1 276 UNP F4NBT2 F4NBT2_HUMAN 25 300 DBREF 8EMF B 1 99 UNP P61769 B2MG_HUMAN 21 119 DBREF 8EMF C 1 9 PDB 8EMF 8EMF 1 9 SEQADV 8EMF MET B 0 UNP P61769 INITIATING METHIONINE SEQRES 1 A 276 GLY SER HIS SER MET ARG TYR PHE TYR THR ALA MET SER SEQRES 2 A 276 ARG PRO GLY ARG GLY GLU PRO ARG PHE ILE ALA VAL GLY SEQRES 3 A 276 TYR VAL ASP ASP THR GLN PHE VAL ARG PHE ASP SER ASP SEQRES 4 A 276 ALA ALA SER PRO ARG THR GLU PRO ARG ALA PRO TRP ILE SEQRES 5 A 276 GLU GLN GLU GLY PRO GLU TYR TRP ASP ARG ASN THR GLN SEQRES 6 A 276 ILE PHE LYS THR ASN THR GLN THR TYR ARG GLU SER LEU SEQRES 7 A 276 ARG ASN LEU ARG GLY TYR TYR ASN GLN SER GLU ALA GLY SEQRES 8 A 276 SER HIS ILE ILE GLN ARG MET TYR GLY CYS ASP LEU GLY SEQRES 9 A 276 PRO ASP GLY ARG LEU LEU ARG GLY HIS ASP GLN SER ALA SEQRES 10 A 276 TYR ASP GLY LYS ASP TYR ILE ALA LEU ASN GLU ASP LEU SEQRES 11 A 276 SER SER TRP THR ALA ALA ASP THR ALA ALA GLN ILE THR SEQRES 12 A 276 GLN ARG LYS TRP GLU ALA ALA ARG VAL ALA GLU GLN LEU SEQRES 13 A 276 ARG ALA TYR LEU GLU GLY LEU CYS VAL GLU TRP LEU ARG SEQRES 14 A 276 ARG TYR LEU GLU ASN GLY LYS GLU THR LEU GLN ARG ALA SEQRES 15 A 276 ASP PRO PRO LYS THR HIS VAL THR HIS HIS PRO VAL SER SEQRES 16 A 276 ASP HIS GLU ALA THR LEU ARG CYS TRP ALA LEU GLY PHE SEQRES 17 A 276 TYR PRO ALA GLU ILE THR LEU THR TRP GLN ARG ASP GLY SEQRES 18 A 276 GLU ASP GLN THR GLN ASP THR GLU LEU VAL GLU THR ARG SEQRES 19 A 276 PRO ALA GLY ASP ARG THR PHE GLN LYS TRP ALA ALA VAL SEQRES 20 A 276 VAL VAL PRO SER GLY GLU GLU GLN ARG TYR THR CYS HIS SEQRES 21 A 276 VAL GLN HIS GLU GLY LEU PRO LYS PRO LEU THR LEU ARG SEQRES 22 A 276 TRP GLU PRO SEQRES 1 B 100 MET ILE GLN ARG THR PRO LYS ILE GLN VAL TYR SER ARG SEQRES 2 B 100 HIS PRO ALA GLU ASN GLY LYS SER ASN PHE LEU ASN CYS SEQRES 3 B 100 TYR VAL SER GLY PHE HIS PRO SER ASP ILE GLU VAL ASP SEQRES 4 B 100 LEU LEU LYS ASN GLY GLU ARG ILE GLU LYS VAL GLU HIS SEQRES 5 B 100 SER ASP LEU SER PHE SER LYS ASP TRP SER PHE TYR LEU SEQRES 6 B 100 LEU TYR TYR THR GLU PHE THR PRO THR GLU LYS ASP GLU SEQRES 7 B 100 TYR ALA CYS ARG VAL ASN HIS VAL THR LEU SER GLN PRO SEQRES 8 B 100 LYS ILE VAL LYS TRP ASP ARG ASP MET SEQRES 1 C 9 LEU PRO PHE ASP LYS SER THR VAL MET FORMUL 4 HOH *450(H2 O) HELIX 1 AA1 ALA A 49 GLU A 53 5 5 HELIX 2 AA2 GLY A 56 TYR A 85 1 30 HELIX 3 AA3 ASP A 137 ALA A 150 1 14 HELIX 4 AA4 ARG A 151 GLY A 162 1 12 HELIX 5 AA5 GLY A 162 GLY A 175 1 14 HELIX 6 AA6 GLY A 175 GLN A 180 1 6 HELIX 7 AA7 GLU A 253 GLN A 255 5 3 SHEET 1 AA1 8 GLU A 46 PRO A 47 0 SHEET 2 AA1 8 THR A 31 ASP A 37 -1 N ARG A 35 O GLU A 46 SHEET 3 AA1 8 ARG A 21 VAL A 28 -1 N GLY A 26 O PHE A 33 SHEET 4 AA1 8 HIS A 3 MET A 12 -1 N ARG A 6 O TYR A 27 SHEET 5 AA1 8 ILE A 94 LEU A 103 -1 O LEU A 103 N HIS A 3 SHEET 6 AA1 8 LEU A 109 TYR A 118 -1 O LEU A 110 N ASP A 102 SHEET 7 AA1 8 LYS A 121 LEU A 126 -1 O LEU A 126 N ASP A 114 SHEET 8 AA1 8 TRP A 133 ALA A 135 -1 O THR A 134 N ALA A 125 SHEET 1 AA2 4 LYS A 186 PRO A 193 0 SHEET 2 AA2 4 GLU A 198 PHE A 208 -1 O TRP A 204 N HIS A 188 SHEET 3 AA2 4 PHE A 241 PRO A 250 -1 O VAL A 249 N ALA A 199 SHEET 4 AA2 4 GLU A 229 LEU A 230 -1 N GLU A 229 O ALA A 246 SHEET 1 AA3 4 LYS A 186 PRO A 193 0 SHEET 2 AA3 4 GLU A 198 PHE A 208 -1 O TRP A 204 N HIS A 188 SHEET 3 AA3 4 PHE A 241 PRO A 250 -1 O VAL A 249 N ALA A 199 SHEET 4 AA3 4 ARG A 234 PRO A 235 -1 N ARG A 234 O GLN A 242 SHEET 1 AA4 4 GLU A 222 ASP A 223 0 SHEET 2 AA4 4 THR A 214 ARG A 219 -1 N ARG A 219 O GLU A 222 SHEET 3 AA4 4 TYR A 257 GLN A 262 -1 O HIS A 260 N THR A 216 SHEET 4 AA4 4 LEU A 270 LEU A 272 -1 O LEU A 272 N CYS A 259 SHEET 1 AA5 4 LYS B 6 SER B 11 0 SHEET 2 AA5 4 ASN B 21 PHE B 30 -1 O ASN B 24 N TYR B 10 SHEET 3 AA5 4 PHE B 62 PHE B 70 -1 O THR B 68 N LEU B 23 SHEET 4 AA5 4 GLU B 50 HIS B 51 -1 N GLU B 50 O TYR B 67 SHEET 1 AA6 4 LYS B 6 SER B 11 0 SHEET 2 AA6 4 ASN B 21 PHE B 30 -1 O ASN B 24 N TYR B 10 SHEET 3 AA6 4 PHE B 62 PHE B 70 -1 O THR B 68 N LEU B 23 SHEET 4 AA6 4 SER B 55 PHE B 56 -1 N SER B 55 O TYR B 63 SHEET 1 AA7 4 GLU B 44 ARG B 45 0 SHEET 2 AA7 4 GLU B 36 LYS B 41 -1 N LYS B 41 O GLU B 44 SHEET 3 AA7 4 TYR B 78 ASN B 83 -1 O ARG B 81 N ASP B 38 SHEET 4 AA7 4 LYS B 91 LYS B 94 -1 O LYS B 91 N VAL B 82 SSBOND 1 CYS A 101 CYS A 164 1555 1555 2.06 SSBOND 2 CYS A 203 CYS A 259 1555 1555 2.03 SSBOND 3 CYS B 25 CYS B 80 1555 1555 2.03 CISPEP 1 TYR A 209 PRO A 210 0 -0.16 CISPEP 2 HIS B 31 PRO B 32 0 2.67 CRYST1 51.000 81.645 109.239 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019608 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012248 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009154 0.00000