HEADER LIGASE 06-OCT-22 8EPT TITLE UBE3A ISOFORM 2 AZUL DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: UBIQUITIN-PROTEIN LIGASE E3A; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: E6AP UBIQUITIN-PROTEIN LIGASE,HECT-TYPE UBIQUITIN COMPND 5 TRANSFERASE E3A,HUMAN PAPILLOMAVIRUS E6-ASSOCIATED PROTEIN,ONCOGENIC COMPND 6 PROTEIN-ASSOCIATED PROTEIN E6-AP,RENAL CARCINOMA ANTIGEN NY-REN-54; COMPND 7 EC: 2.3.2.26; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: UBE3A, E6AP, EPVE6AP, HPVE6A; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28B+ KEYWDS UBIQUITIN LIGASE, PROTEASOME INTERACTION, LIGASE EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR T.A.BREGNARD,I.BEZSONOVA REVDAT 2 15-MAY-24 8EPT 1 REMARK REVDAT 1 05-JUL-23 8EPT 0 JRNL AUTH T.A.BREGNARD,D.FAIRCHILD,X.CHEN,H.ERLANDSEN,K.J.WALTERS, JRNL AUTH 2 D.M.KORZHNEV,I.BEZSONOVA JRNL TITL DIFFERENCES IN STRUCTURE, DYNAMICS AND ZN-COORDINATION JRNL TITL 2 BETWEEN ISOFORMS OF HUMAN UBIQUITIN LIGASE UBE3A JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: CNS REFINEMENT IN EXPLICIT WATER REMARK 4 REMARK 4 8EPT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-OCT-22. REMARK 100 THE DEPOSITION ID IS D_1000269175. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.0 REMARK 210 IONIC STRENGTH : 450 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 1.8 MM [U-99% 13C; U-99% 15N] REMARK 210 UBE3A ISO2 AZUL, 10 MM MOPS, 450 REMARK 210 MM SODIUM CHLORIDE, 10 MM BETA- REMARK 210 MERCAPTOETHANOL, 10 UM ZINC REMARK 210 SULFATE, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D HNCO; 3D REMARK 210 HNCA; 3D HN(CO)CA; 3D HNCACB; 3D REMARK 210 CBCA(CO)NH; 3D HBHA(CO)NH; 2D 1H- REMARK 210 13C HSQC; 3D CCH-TOCSY; 3D HCCH- REMARK 210 TOCSY; 3D 1H-15N NOESY; 3D 1H- REMARK 210 13C NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : VNMRS REMARK 210 SPECTROMETER MANUFACTURER : AGILENT REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE, NMRFAM-SPARKY, TALOS, REMARK 210 CYANA REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 1000 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 CYS A 10 -65.95 -103.62 REMARK 500 1 PRO A 17 84.76 -53.32 REMARK 500 1 GLU A 45 -64.56 -91.08 REMARK 500 1 PHE A 56 52.88 -93.74 REMARK 500 1 CYS A 57 143.82 -176.50 REMARK 500 1 ALA A 83 -179.40 -66.17 REMARK 500 1 ASP A 87 131.98 64.37 REMARK 500 2 ALA A 51 66.57 -113.78 REMARK 500 2 PHE A 56 57.77 -92.31 REMARK 500 2 CYS A 57 148.83 -174.92 REMARK 500 2 ALA A 83 -171.73 -69.46 REMARK 500 2 ASP A 87 153.33 62.49 REMARK 500 3 LYS A 6 139.03 175.68 REMARK 500 3 LEU A 7 -164.46 -111.10 REMARK 500 3 HIS A 8 36.84 -143.79 REMARK 500 3 GLN A 9 34.38 -88.76 REMARK 500 3 CYS A 10 80.10 56.98 REMARK 500 3 PRO A 17 99.14 -52.27 REMARK 500 3 PHE A 56 42.34 -99.01 REMARK 500 3 ALA A 83 -167.15 -71.56 REMARK 500 3 ASP A 87 146.83 66.18 REMARK 500 4 PRO A 17 97.19 -68.62 REMARK 500 4 GLN A 18 104.93 -58.01 REMARK 500 4 THR A 53 28.32 45.14 REMARK 500 4 PHE A 56 55.03 -93.82 REMARK 500 4 ASP A 87 139.09 67.76 REMARK 500 4 HIS A 89 124.99 71.22 REMARK 500 5 PRO A 17 98.25 -69.84 REMARK 500 5 GLN A 18 108.07 -49.94 REMARK 500 5 PHE A 56 57.58 -92.42 REMARK 500 5 CYS A 57 147.19 -170.70 REMARK 500 5 ASN A 82 60.06 61.05 REMARK 500 5 ALA A 83 -174.43 -68.16 REMARK 500 5 ASP A 87 150.95 65.18 REMARK 500 6 SER A 14 -23.95 -164.29 REMARK 500 6 PRO A 17 103.48 -51.77 REMARK 500 6 ALA A 83 -165.57 -74.75 REMARK 500 6 ASP A 87 143.51 67.81 REMARK 500 7 ALA A 51 53.00 -105.26 REMARK 500 7 PHE A 56 54.95 -92.39 REMARK 500 7 ASP A 87 145.31 66.39 REMARK 500 8 CYS A 10 88.98 -160.95 REMARK 500 8 PRO A 17 91.50 -59.72 REMARK 500 8 ALA A 51 67.32 -109.94 REMARK 500 8 THR A 53 43.26 38.74 REMARK 500 8 PHE A 56 54.91 -91.55 REMARK 500 8 ALA A 83 -165.35 -72.39 REMARK 500 8 ASP A 87 136.65 67.41 REMARK 500 9 GLU A 5 -86.60 -63.13 REMARK 500 9 CYS A 10 -74.11 67.60 REMARK 500 REMARK 500 THIS ENTRY HAS 119 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 101 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 47 SG REMARK 620 2 CYS A 52 SG 112.0 REMARK 620 3 CYS A 57 SG 108.8 107.2 REMARK 620 4 CYS A 86 SG 108.0 110.3 110.5 REMARK 620 N 1 2 3 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 51655 RELATED DB: BMRB DBREF 8EPT A 4 90 UNP Q05086 UBE3A_HUMAN 1 87 SEQADV 8EPT GLY A 1 UNP Q05086 EXPRESSION TAG SEQADV 8EPT SER A 2 UNP Q05086 EXPRESSION TAG SEQADV 8EPT HIS A 3 UNP Q05086 EXPRESSION TAG SEQRES 1 A 90 GLY SER HIS MET GLU LYS LEU HIS GLN CYS TYR TRP LYS SEQRES 2 A 90 SER GLY GLU PRO GLN SER ASP ASP ILE GLU ALA SER ARG SEQRES 3 A 90 MET LYS ARG ALA ALA ALA LYS HIS LEU ILE GLU ARG TYR SEQRES 4 A 90 TYR HIS GLN LEU THR GLU GLY CYS GLY ASN GLU ALA CYS SEQRES 5 A 90 THR ASN GLU PHE CYS ALA SER CYS PRO THR PHE LEU ARG SEQRES 6 A 90 MET ASP ASN ASN ALA ALA ALA ILE LYS ALA LEU GLU LEU SEQRES 7 A 90 TYR LYS ILE ASN ALA LYS LEU CYS ASP PRO HIS PRO HET ZN A 101 1 HETNAM ZN ZINC ION FORMUL 2 ZN ZN 2+ HELIX 1 AA1 ASP A 20 ARG A 29 1 10 HELIX 2 AA2 ALA A 31 GLU A 45 1 15 HELIX 3 AA3 ASP A 67 ASN A 82 1 16 LINK SG CYS A 47 ZN ZN A 101 1555 1555 2.34 LINK SG CYS A 52 ZN ZN A 101 1555 1555 2.35 LINK SG CYS A 57 ZN ZN A 101 1555 1555 2.32 LINK SG CYS A 86 ZN ZN A 101 1555 1555 2.35 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1