HEADER PROTEIN BINDING 07-OCT-22 8EQH TITLE THE CRYSTAL STRUCTURE OF 14-3-3 BETA CONTAINING 3-NITROTYROSINE AT TITLE 2 POSITION Y213 COMPND MOL_ID: 1; COMPND 2 MOLECULE: 14-3-3 PROTEIN BETA/ALPHA; COMPND 3 CHAIN: B, A; COMPND 4 SYNONYM: PROTEIN 1054,PROTEIN KINASE C INHIBITOR PROTEIN 1,KCIP-1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: YWHAB; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR P.ZHU,R.B.COOLEY REVDAT 5 25-OCT-23 8EQH 1 REMARK REVDAT 4 22-MAR-23 8EQH 1 JRNL REVDAT 3 01-MAR-23 8EQH 1 JRNL REVDAT 2 15-FEB-23 8EQH 1 JRNL REVDAT 1 25-JAN-23 8EQH 0 JRNL AUTH P.ZHU,K.T.NGUYEN,A.B.ESTELLE,N.N.SLUCHANKO,R.A.MEHL, JRNL AUTH 2 R.B.COOLEY JRNL TITL GENETIC ENCODING OF 3-NITRO-TYROSINE REVEALS THE IMPACTS OF JRNL TITL 2 14-3-3 NITRATION ON CLIENT BINDING AND DEPHOSPHORYLATION. JRNL REF PROTEIN SCI. V. 32 E4574 2023 JRNL REFN ESSN 1469-896X JRNL PMID 36691781 JRNL DOI 10.1002/PRO.4574 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.22 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 52151 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.219 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 2616 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.2200 - 5.0700 1.00 2665 145 0.1669 0.1700 REMARK 3 2 5.0700 - 4.0200 1.00 2656 140 0.1440 0.1903 REMARK 3 3 4.0200 - 3.5100 1.00 2631 139 0.1615 0.1933 REMARK 3 4 3.5100 - 3.1900 1.00 2622 137 0.1901 0.2253 REMARK 3 5 3.1900 - 2.9600 1.00 2610 139 0.1983 0.2348 REMARK 3 6 2.9600 - 2.7900 1.00 2645 141 0.1955 0.2460 REMARK 3 7 2.7900 - 2.6500 1.00 2585 135 0.2030 0.2397 REMARK 3 8 2.6500 - 2.5300 1.00 2630 143 0.2065 0.2852 REMARK 3 9 2.5300 - 2.4400 1.00 2614 137 0.2048 0.2198 REMARK 3 10 2.4400 - 2.3500 1.00 2647 142 0.2059 0.2741 REMARK 3 11 2.3500 - 2.2800 1.00 2626 137 0.2070 0.2207 REMARK 3 12 2.2800 - 2.2100 1.00 2592 132 0.2209 0.2391 REMARK 3 13 2.2100 - 2.1600 1.00 2607 143 0.2371 0.2539 REMARK 3 14 2.1600 - 2.1000 1.00 2596 146 0.2699 0.2982 REMARK 3 15 2.1000 - 2.0600 1.00 2637 127 0.3130 0.3230 REMARK 3 16 2.0600 - 2.0100 1.00 2641 143 0.3659 0.4486 REMARK 3 17 2.0100 - 1.9700 1.00 2574 120 0.3913 0.4264 REMARK 3 18 1.9700 - 1.9300 0.97 2519 143 0.4156 0.4593 REMARK 3 19 1.9300 - 1.9000 0.93 2438 127 0.4612 0.4408 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.312 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.666 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 48.49 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 66.37 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 3695 REMARK 3 ANGLE : 0.721 4997 REMARK 3 CHIRALITY : 0.040 565 REMARK 3 PLANARITY : 0.006 648 REMARK 3 DIHEDRAL : 14.265 1389 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 18 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 71 THROUGH 105 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.9551 -13.7428 20.9552 REMARK 3 T TENSOR REMARK 3 T11: 0.4655 T22: 0.4940 REMARK 3 T33: 0.5865 T12: 0.0698 REMARK 3 T13: -0.0128 T23: 0.0447 REMARK 3 L TENSOR REMARK 3 L11: 4.3907 L22: 9.3654 REMARK 3 L33: 1.7771 L12: -0.0553 REMARK 3 L13: 0.2055 L23: -0.4527 REMARK 3 S TENSOR REMARK 3 S11: 0.1391 S12: -0.0844 S13: 0.3875 REMARK 3 S21: 0.3816 S22: -0.3355 S23: -1.6490 REMARK 3 S31: -0.3944 S32: 0.2669 S33: 0.0852 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 106 THROUGH 161 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.1866 -34.7774 16.9334 REMARK 3 T TENSOR REMARK 3 T11: 0.3951 T22: 0.4213 REMARK 3 T33: 0.5111 T12: 0.0850 REMARK 3 T13: -0.0094 T23: 0.0535 REMARK 3 L TENSOR REMARK 3 L11: 5.0794 L22: 4.1244 REMARK 3 L33: 4.3311 L12: -1.7488 REMARK 3 L13: -1.3723 L23:1.7251435 REMARK 3 S TENSOR REMARK 3 S11: -0.0067 S12: -0.2307 S13: -0.4400 REMARK 3 S21: 0.1424 S22: -0.0735 S23: -0.2542 REMARK 3 S31: 0.0724 S32: -0.0571 S33: 0.0690 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 162 THROUGH 209 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.2993 -36.3089 3.2334 REMARK 3 T TENSOR REMARK 3 T11: 0.5201 T22: 0.7728 REMARK 3 T33: 0.6652 T12: 0.0757 REMARK 3 T13: -0.0418 T23: -0.1342 REMARK 3 L TENSOR REMARK 3 L11: 6.6385 L22: 0.6091 REMARK 3 L33: 1.7473 L12: 0.6513 REMARK 3 L13: 1.2068 L23: -0.4805 REMARK 3 S TENSOR REMARK 3 S11: 0.1229 S12: 1.3044 S13: -0.7522 REMARK 3 S21: -0.3194 S22: -0.0338 S23: 0.0821 REMARK 3 S31: 0.0899 S32: -0.2967 S33: -0.1411 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 210 THROUGH 233 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.5676 -30.7993 0.4428 REMARK 3 T TENSOR REMARK 3 T11: 0.6333 T22: 1.1063 REMARK 3 T33: 0.6837 T12: 0.1552 REMARK 3 T13: -0.1942 T23: 0.0684 REMARK 3 L TENSOR REMARK 3 L11: 8.1600 L22: 4.5649 REMARK 3 L33: 7.7696 L12: 3.4968 REMARK 3 L13: -5.9493 L23: -3.0747 REMARK 3 S TENSOR REMARK 3 S11: -0.2830 S12: 1.0087 S13: 0.6080 REMARK 3 S21: -0.2042 S22: 0.2150 S23: 0.3764 REMARK 3 S31: 0.0348 S32: -0.7716 S33: 0.0869 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 3 THROUGH 17 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.2599 3.2073 19.9290 REMARK 3 T TENSOR REMARK 3 T11: 0.6091 T22: 0.5235 REMARK 3 T33: 0.7816 T12: 0.0372 REMARK 3 T13: -0.0041 T23: 0.1378 REMARK 3 L TENSOR REMARK 3 L11: 8.3879 L22: 4.4022 REMARK 3 L33: 7.3673 L12: 3.9924 REMARK 3 L13: 1.0872 L23: 4.6774 REMARK 3 S TENSOR REMARK 3 S11: -0.1700 S12: -0.1981 S13: 0.3423 REMARK 3 S21: -1.0581 S22: -0.0057 S23: -1.0698 REMARK 3 S31: -0.7914 S32: 0.5707 S33: 0.1886 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 18 THROUGH 39 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.3761 4.6988 24.6790 REMARK 3 T TENSOR REMARK 3 T11: 0.5032 T22: 0.5754 REMARK 3 T33: 0.6203 T12: 0.0918 REMARK 3 T13: -0.1183 T23: -0.0205 REMARK 3 L TENSOR REMARK 3 L11: 3.5140 L22: 7.3707 REMARK 3 L33: 4.1534 L12: -1.0064 REMARK 3 L13: -1.5800 L23: 0.0516 REMARK 3 S TENSOR REMARK 3 S11: -0.2037 S12: -0.6417 S13: 0.3091 REMARK 3 S21: 0.5841 S22: 0.1565 S23: -1.1017 REMARK 3 S31: -0.1544 S32: 0.6873 S33: 0.1425 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 40 THROUGH 69 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.9909 -2.0866 22.5093 REMARK 3 T TENSOR REMARK 3 T11: 0.4799 T22: 0.4507 REMARK 3 T33: 0.3637 T12: 0.1345 REMARK 3 T13: -0.0125 T23: 0.0046 REMARK 3 L TENSOR REMARK 3 L11: 8.2420 L22: 9.9635 REMARK 3 L33: 1.2106 L12: 2.9179 REMARK 3 L13: -1.2347 L23: -0.5252 REMARK 3 S TENSOR REMARK 3 S11: -0.3534 S12: 0.2939 S13: -0.2037 REMARK 3 S21: -0.1484 S22: 0.4518 S23: 0.6143 REMARK 3 S31: -0.0255 S32: -0.1485 S33: -0.1308 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 70 THROUGH 74 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.4291 -22.8619 29.2859 REMARK 3 T TENSOR REMARK 3 T11: 0.8841 T22: 1.0490 REMARK 3 T33: 1.6377 T12: 0.1273 REMARK 3 T13: -0.0480 T23: -0.0344 REMARK 3 L TENSOR REMARK 3 L11: 0.0407 L22: 1.0230 REMARK 3 L33: 0.9861 L12: -0.0046 REMARK 3 L13: -0.0767 L23: 0.9489 REMARK 3 S TENSOR REMARK 3 S11: -0.1406 S12: 0.6414 S13: 1.7458 REMARK 3 S21: 0.6423 S22: -0.6433 S23: -0.0452 REMARK 3 S31: 0.7284 S32: -0.8469 S33: 0.2570 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 75 THROUGH 105 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.0975 -6.1478 33.1203 REMARK 3 T TENSOR REMARK 3 T11: 0.6772 T22: 0.6789 REMARK 3 T33: 0.5551 T12: 0.1945 REMARK 3 T13: 0.0633 T23: 0.0984 REMARK 3 L TENSOR REMARK 3 L11: 5.5453 L22: 2.3651 REMARK 3 L33: 2.9886 L12: 3.0784 REMARK 3 L13: -0.9664 L23: 0.4584 REMARK 3 S TENSOR REMARK 3 S11: 0.0831 S12: -1.0355 S13: -1.0712 REMARK 3 S21: 1.2505 S22: -0.4153 S23: -0.6318 REMARK 3 S31: 0.2319 S32: -0.1402 S33: 0.2308 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 106 THROUGH 136 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.5084 11.6394 26.2515 REMARK 3 T TENSOR REMARK 3 T11: 0.6066 T22: 0.5456 REMARK 3 T33: 0.4604 T12: 0.1422 REMARK 3 T13: -0.0506 T23: -0.0647 REMARK 3 L TENSOR REMARK 3 L11: 4.3645 L22: 6.3710 REMARK 3 L33: 2.5645 L12: -1.4611 REMARK 3 L13: 0.8299 L23: -0.2009 REMARK 3 S TENSOR REMARK 3 S11: -0.2557 S12: -0.2214 S13: 0.3468 REMARK 3 S21: 0.4434 S22: 0.0626 S23: -0.0399 REMARK 3 S31: -0.1487 S32: 0.2341 S33: 0.1994 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 137 THROUGH 161 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.6266 14.6268 27.4859 REMARK 3 T TENSOR REMARK 3 T11: 0.6253 T22: 0.5023 REMARK 3 T33: 0.5517 T12: 0.1896 REMARK 3 T13: 0.0351 T23: -0.1134 REMARK 3 L TENSOR REMARK 3 L11: 5.2869 L22: 6.8502 REMARK 3 L33: 5.1297 L12: 0.9622 REMARK 3 L13: -1.3524 L23: -2.5527 REMARK 3 S TENSOR REMARK 3 S11: -0.3593 S12: -0.4677 S13: 0.2972 REMARK 3 S21: 0.9132 S22: 0.2268 S23: 0.4653 REMARK 3 S31: -0.4199 S32: -0.3890 S33: 0.0863 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 162 THROUGH 166 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.3726 21.3485 10.9890 REMARK 3 T TENSOR REMARK 3 T11: 0.6761 T22: 0.5883 REMARK 3 T33: 0.7143 T12: -0.0156 REMARK 3 T13: -0.0207 T23: 0.0986 REMARK 3 L TENSOR REMARK 3 L11: 5.2888 L22: 8.1368 REMARK 3 L33: 5.4890 L12: -2.0827 REMARK 3 L13: 3.9101 L23: 2.8251 REMARK 3 S TENSOR REMARK 3 S11: -0.2338 S12: 0.3318 S13: 1.0832 REMARK 3 S21: -0.3909 S22: -0.3899 S23: -0.4088 REMARK 3 S31: -1.4038 S32: 0.7184 S33: 0.3796 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 167 THROUGH 186 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.7113 9.6234 18.6914 REMARK 3 T TENSOR REMARK 3 T11: 0.4978 T22: 0.4321 REMARK 3 T33: 0.5762 T12: 0.1049 REMARK 3 T13: 0.0632 T23: 0.0265 REMARK 3 L TENSOR REMARK 3 L11: 2.5144 L22: 1.6907 REMARK 3 L33: 2.7901 L12: 0.5423 REMARK 3 L13: -0.1876 L23: -0.7219 REMARK 3 S TENSOR REMARK 3 S11: -0.1236 S12: -0.1834 S13: -0.0298 REMARK 3 S21: 0.2500 S22: 0.1452 S23: 0.4427 REMARK 3 S31: 0.1519 S32: -0.0865 S33: -0.0028 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 187 THROUGH 204 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.8729 15.4586 10.4876 REMARK 3 T TENSOR REMARK 3 T11: 0.4656 T22: 0.5074 REMARK 3 T33: 0.6614 T12: 0.0865 REMARK 3 T13: -0.0077 T23: -0.0047 REMARK 3 L TENSOR REMARK 3 L11: 5.9197 L22: 7.5492 REMARK 3 L33: 7.5465 L12: 3.7556 REMARK 3 L13: -4.2896 L23: -4.7983 REMARK 3 S TENSOR REMARK 3 S11: 0.0476 S12: 0.6615 S13: -0.0670 REMARK 3 S21: 0.5422 S22: 0.0088 S23: -0.0731 REMARK 3 S31: -0.4690 S32: -0.4138 S33: -0.1755 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 205 THROUGH 209 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.3768 21.1460 -3.1703 REMARK 3 T TENSOR REMARK 3 T11: 0.9516 T22: 1.0198 REMARK 3 T33: 0.7176 T12: 0.0331 REMARK 3 T13: 0.0286 T23: 0.0926 REMARK 3 L TENSOR REMARK 3 L11: 3.3113 L22: 1.6462 REMARK 3 L33: 6.6312 L12: 2.2532 REMARK 3 L13: -4.4431 L23: -3.2256 REMARK 3 S TENSOR REMARK 3 S11: 0.2077 S12: -0.1729 S13: 0.8321 REMARK 3 S21: -0.2210 S22: -0.5596 S23: 0.6247 REMARK 3 S31: -1.5326 S32: -0.6768 S33: 0.1220 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 210 THROUGH 232 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.0111 8.2657 -6.7365 REMARK 3 T TENSOR REMARK 3 T11: 0.5864 T22: 0.5230 REMARK 3 T33: 0.5307 T12: -0.1294 REMARK 3 T13: -0.0072 T23: 0.0318 REMARK 3 L TENSOR REMARK 3 L11: 2.5185 L22: 3.5236 REMARK 3 L33: 5.1570 L12: -2.5152 REMARK 3 L13: -2.7715 L23: 2.5721 REMARK 3 S TENSOR REMARK 3 S11: -0.3865 S12: -0.5885 S13: -1.1442 REMARK 3 S21: 0.1720 S22: 0.0493 S23: 0.3211 REMARK 3 S31: 0.3984 S32: -0.4322 S33: 0.2579 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 3 THROUGH 39 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.5842 -25.6971 28.8141 REMARK 3 T TENSOR REMARK 3 T11: 0.5499 T22: 0.5577 REMARK 3 T33: 0.6021 T12: 0.0653 REMARK 3 T13: 0.0950 T23: 0.0729 REMARK 3 L TENSOR REMARK 3 L11: 5.1554 L22: 9.3786 REMARK 3 L33: 1.3195 L12: -1.6812 REMARK 3 L13: 0.7828 L23: -0.1695 REMARK 3 S TENSOR REMARK 3 S11: -0.0712 S12: -0.5392 S13: -0.1757 REMARK 3 S21: 0.8817 S22: 0.2315 S23: 1.0024 REMARK 3 S31: 0.1029 S32: -0.3236 S33: -0.1865 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 40 THROUGH 70 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.7223 -18.7957 16.4389 REMARK 3 T TENSOR REMARK 3 T11: 0.5281 T22: 0.5039 REMARK 3 T33: 0.5556 T12: 0.1151 REMARK 3 T13: 0.0317 T23: 0.0617 REMARK 3 L TENSOR REMARK 3 L11: 5.9468 L22: 3.8116 REMARK 3 L33: 3.1561 L12: 2.4107 REMARK 3 L13: -2.9886 L23: -1.0953 REMARK 3 S TENSOR REMARK 3 S11: -0.0736 S12: 0.8622 S13: -0.1884 REMARK 3 S21: -0.3927 S22: 0.3943 S23: -0.2949 REMARK 3 S31: -0.2804 S32: -0.6007 S33: -0.2665 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8EQH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-OCT-22. REMARK 100 THE DEPOSITION ID IS D_1000269178. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-DEC-19 REMARK 200 TEMPERATURE (KELVIN) : 96 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 52427 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 44.220 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 26.30 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.4800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 1.19.2_4158 REMARK 200 STARTING MODEL: 2BQ0 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.99 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20%-27% PEG 3350, +/- 50 MM MGCL2, 100 REMARK 280 MM BIS-TRIS PH 5.5-6.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 42.64500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 57.51500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 42.64500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 57.51500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1910 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23420 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 GLU B 233 REMARK 465 ASN B 234 REMARK 465 GLN B 235 REMARK 465 GLY B 236 REMARK 465 ASP B 237 REMARK 465 GLU B 238 REMARK 465 GLY B 239 REMARK 465 GLU B 240 REMARK 465 ASN B 241 REMARK 465 LEU B 242 REMARK 465 TYR B 243 REMARK 465 PHE B 244 REMARK 465 GLN B 245 REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 LEU A 205 REMARK 465 ASP A 206 REMARK 465 ASN A 234 REMARK 465 GLN A 235 REMARK 465 GLY A 236 REMARK 465 ASP A 237 REMARK 465 GLU A 238 REMARK 465 GLY A 239 REMARK 465 GLU A 240 REMARK 465 ASN A 241 REMARK 465 LEU A 242 REMARK 465 TYR A 243 REMARK 465 PHE A 244 REMARK 465 GLN A 245 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU B 7 CG CD OE1 OE2 REMARK 470 GLN B 69 CG CD OE1 NE2 REMARK 470 LYS B 70 CG CD CE NZ REMARK 470 GLU B 72 CG CD OE1 OE2 REMARK 470 ARG B 73 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 75 CG CD OE1 OE2 REMARK 470 LYS B 76 CG CD CE NZ REMARK 470 LYS B 77 CD CE NZ REMARK 470 GLN B 78 CG CD OE1 NE2 REMARK 470 GLU B 101 CG CD OE1 OE2 REMARK 470 LYS B 105 CG CD CE NZ REMARK 470 GLN B 141 CG CD OE1 NE2 REMARK 470 ASP B 206 CG OD1 OD2 REMARK 470 LYS B 214 CD CE NZ REMARK 470 ARG B 224 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 72 CG CD OE1 OE2 REMARK 470 ARG A 73 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 76 CG CD CE NZ REMARK 470 LYS A 77 CG CD CE NZ REMARK 470 GLN A 163 CG CD OE1 NE2 REMARK 470 GLU A 211 CG CD OE1 OE2 REMARK 470 LYS A 214 CD CE NZ REMARK 470 GLN A 221 CG CD OE1 NE2 REMARK 470 GLU A 233 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR B 106 -53.02 -123.33 REMARK 500 SER B 186 77.86 -115.58 REMARK 500 SER B 186 76.68 -114.74 REMARK 500 THR B 231 58.79 -102.34 REMARK 500 GLU A 72 -72.25 -66.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 8EQ8 RELATED DB: PDB REMARK 900 14-3-3 BETA 130NY DBREF 8EQH B 1 239 UNP P31946 1433B_HUMAN 1 239 DBREF 8EQH A 1 239 UNP P31946 1433B_HUMAN 1 239 SEQADV 8EQH GLU B 240 UNP P31946 EXPRESSION TAG SEQADV 8EQH ASN B 241 UNP P31946 EXPRESSION TAG SEQADV 8EQH LEU B 242 UNP P31946 EXPRESSION TAG SEQADV 8EQH TYR B 243 UNP P31946 EXPRESSION TAG SEQADV 8EQH PHE B 244 UNP P31946 EXPRESSION TAG SEQADV 8EQH GLN B 245 UNP P31946 EXPRESSION TAG SEQADV 8EQH GLU A 240 UNP P31946 EXPRESSION TAG SEQADV 8EQH ASN A 241 UNP P31946 EXPRESSION TAG SEQADV 8EQH LEU A 242 UNP P31946 EXPRESSION TAG SEQADV 8EQH TYR A 243 UNP P31946 EXPRESSION TAG SEQADV 8EQH PHE A 244 UNP P31946 EXPRESSION TAG SEQADV 8EQH GLN A 245 UNP P31946 EXPRESSION TAG SEQRES 1 B 245 MET THR MET ASP LYS SER GLU LEU VAL GLN LYS ALA LYS SEQRES 2 B 245 LEU ALA GLU GLN ALA GLU ARG TYR ASP ASP MET ALA ALA SEQRES 3 B 245 ALA MET LYS ALA VAL THR GLU GLN GLY HIS GLU LEU SER SEQRES 4 B 245 ASN GLU GLU ARG ASN LEU LEU SER VAL ALA TYR LYS ASN SEQRES 5 B 245 VAL VAL GLY ALA ARG ARG SER SER TRP ARG VAL ILE SER SEQRES 6 B 245 SER ILE GLU GLN LYS THR GLU ARG ASN GLU LYS LYS GLN SEQRES 7 B 245 GLN MET GLY LYS GLU TYR ARG GLU LYS ILE GLU ALA GLU SEQRES 8 B 245 LEU GLN ASP ILE CYS ASN ASP VAL LEU GLU LEU LEU ASP SEQRES 9 B 245 LYS TYR LEU ILE PRO ASN ALA THR GLN PRO GLU SER LYS SEQRES 10 B 245 VAL PHE TYR LEU LYS MET LYS GLY ASP TYR PHE ARG TYR SEQRES 11 B 245 LEU SER GLU VAL ALA SER GLY ASP ASN LYS GLN THR THR SEQRES 12 B 245 VAL SER ASN SER GLN GLN ALA TYR GLN GLU ALA PHE GLU SEQRES 13 B 245 ILE SER LYS LYS GLU MET GLN PRO THR HIS PRO ILE ARG SEQRES 14 B 245 LEU GLY LEU ALA LEU ASN PHE SER VAL PHE TYR TYR GLU SEQRES 15 B 245 ILE LEU ASN SER PRO GLU LYS ALA CYS SER LEU ALA LYS SEQRES 16 B 245 THR ALA PHE ASP GLU ALA ILE ALA GLU LEU ASP THR LEU SEQRES 17 B 245 ASN GLU GLU SER NIY LYS ASP SER THR LEU ILE MET GLN SEQRES 18 B 245 LEU LEU ARG ASP ASN LEU THR LEU TRP THR SER GLU ASN SEQRES 19 B 245 GLN GLY ASP GLU GLY GLU ASN LEU TYR PHE GLN SEQRES 1 A 245 MET THR MET ASP LYS SER GLU LEU VAL GLN LYS ALA LYS SEQRES 2 A 245 LEU ALA GLU GLN ALA GLU ARG TYR ASP ASP MET ALA ALA SEQRES 3 A 245 ALA MET LYS ALA VAL THR GLU GLN GLY HIS GLU LEU SER SEQRES 4 A 245 ASN GLU GLU ARG ASN LEU LEU SER VAL ALA TYR LYS ASN SEQRES 5 A 245 VAL VAL GLY ALA ARG ARG SER SER TRP ARG VAL ILE SER SEQRES 6 A 245 SER ILE GLU GLN LYS THR GLU ARG ASN GLU LYS LYS GLN SEQRES 7 A 245 GLN MET GLY LYS GLU TYR ARG GLU LYS ILE GLU ALA GLU SEQRES 8 A 245 LEU GLN ASP ILE CYS ASN ASP VAL LEU GLU LEU LEU ASP SEQRES 9 A 245 LYS TYR LEU ILE PRO ASN ALA THR GLN PRO GLU SER LYS SEQRES 10 A 245 VAL PHE TYR LEU LYS MET LYS GLY ASP TYR PHE ARG TYR SEQRES 11 A 245 LEU SER GLU VAL ALA SER GLY ASP ASN LYS GLN THR THR SEQRES 12 A 245 VAL SER ASN SER GLN GLN ALA TYR GLN GLU ALA PHE GLU SEQRES 13 A 245 ILE SER LYS LYS GLU MET GLN PRO THR HIS PRO ILE ARG SEQRES 14 A 245 LEU GLY LEU ALA LEU ASN PHE SER VAL PHE TYR TYR GLU SEQRES 15 A 245 ILE LEU ASN SER PRO GLU LYS ALA CYS SER LEU ALA LYS SEQRES 16 A 245 THR ALA PHE ASP GLU ALA ILE ALA GLU LEU ASP THR LEU SEQRES 17 A 245 ASN GLU GLU SER NIY LYS ASP SER THR LEU ILE MET GLN SEQRES 18 A 245 LEU LEU ARG ASP ASN LEU THR LEU TRP THR SER GLU ASN SEQRES 19 A 245 GLN GLY ASP GLU GLY GLU ASN LEU TYR PHE GLN MODRES 8EQH NIY B 213 TYR MODIFIED RESIDUE MODRES 8EQH NIY A 213 TYR MODIFIED RESIDUE HET NIY B 213 15 HET NIY A 213 15 HETNAM NIY META-NITRO-TYROSINE FORMUL 1 NIY 2(C9 H10 N2 O5) FORMUL 3 HOH *144(H2 O) HELIX 1 AA1 ASP B 4 ALA B 18 1 15 HELIX 2 AA2 ARG B 20 GLN B 34 1 15 HELIX 3 AA3 SER B 39 LYS B 70 1 32 HELIX 4 AA4 ASN B 74 TYR B 106 1 33 HELIX 5 AA5 TYR B 106 ALA B 111 1 6 HELIX 6 AA6 GLN B 113 ALA B 135 1 23 HELIX 7 AA7 SER B 136 MET B 162 1 27 HELIX 8 AA8 HIS B 166 ILE B 183 1 18 HELIX 9 AA9 SER B 186 LEU B 205 1 20 HELIX 10 AB1 ASN B 209 THR B 231 1 23 HELIX 11 AB2 ASP A 4 ALA A 18 1 15 HELIX 12 AB3 ARG A 20 GLN A 34 1 15 HELIX 13 AB4 SER A 39 THR A 71 1 33 HELIX 14 AB5 ASN A 74 TYR A 106 1 33 HELIX 15 AB6 TYR A 106 ALA A 111 1 6 HELIX 16 AB7 GLN A 113 ALA A 135 1 23 HELIX 17 AB8 GLY A 137 MET A 162 1 26 HELIX 18 AB9 HIS A 166 ILE A 183 1 18 HELIX 19 AC1 SER A 186 ALA A 203 1 18 HELIX 20 AC2 ASN A 209 SER A 232 1 24 LINK C SER B 212 N NIY B 213 1555 1555 1.33 LINK C NIY B 213 N LYS B 214 1555 1555 1.33 LINK C SER A 212 N NIY A 213 1555 1555 1.33 LINK C NIY A 213 N LYS A 214 1555 1555 1.33 CRYST1 85.290 115.030 79.490 90.00 119.54 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011725 0.000000 0.006644 0.00000 SCALE2 0.000000 0.008693 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014459 0.00000