HEADER TRANSCRIPTION 11-OCT-22 8EQZ TITLE CRYSTAL STRUCTURE OF PREGNANE X RECEPTOR LIGAND BINDING DOMAIN TITLE 2 COMPLEXED WITH T0901317 ANALOG T0-C6 COMPND MOL_ID: 1; COMPND 2 MOLECULE: NUCLEAR RECEPTOR SUBFAMILY 1 GROUP I MEMBER 2; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ORPHAN NUCLEAR RECEPTOR PAR1,ORPHAN NUCLEAR RECEPTOR PXR, COMPND 5 PREGNANE X RECEPTOR,STEROID AND XENOBIOTIC RECEPTOR,SXR; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: NR1I2, PXR; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NUCLEAR RECEPTOR, TRANSCRIPTION FACTOR, METABOLISM, ANTIBIOTIC, KEYWDS 2 TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR A.D.HUBER,S.POUDEL,J.SEETHARAMAN,D.J.MILLER,W.LIN,Y.LI,T.CHEN REVDAT 2 25-OCT-23 8EQZ 1 REMARK REVDAT 1 15-MAR-23 8EQZ 0 JRNL AUTH W.LIN,A.D.HUBER,S.POUDEL,Y.LI,J.SEETHARAMAN,D.J.MILLER, JRNL AUTH 2 T.CHEN JRNL TITL STRUCTURE-GUIDED APPROACH TO MODULATE SMALL MOLECULE BINDING JRNL TITL 2 TO A PROMISCUOUS LIGAND-ACTIVATED PROTEIN. JRNL REF PROC.NATL.ACAD.SCI.USA V. 120 04120 2023 JRNL REFN ESSN 1091-6490 JRNL PMID 36848571 JRNL DOI 10.1073/PNAS.2217804120 REMARK 2 REMARK 2 RESOLUTION. 2.37 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.37 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.57 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 33203 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.205 REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 1656 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.5700 - 5.4100 1.00 2807 148 0.1958 0.2085 REMARK 3 2 5.4100 - 4.3000 1.00 2696 142 0.1819 0.1882 REMARK 3 3 4.3000 - 3.7600 1.00 2649 144 0.1784 0.2043 REMARK 3 4 3.7600 - 3.4100 1.00 2657 134 0.1988 0.2563 REMARK 3 5 3.4100 - 3.1700 1.00 2635 140 0.2120 0.2415 REMARK 3 6 3.1700 - 2.9800 1.00 2623 140 0.2334 0.2447 REMARK 3 7 2.9800 - 2.8300 1.00 2608 132 0.2307 0.2659 REMARK 3 8 2.8300 - 2.7100 1.00 2602 134 0.2292 0.2368 REMARK 3 9 2.7100 - 2.6100 1.00 2618 141 0.2297 0.3014 REMARK 3 10 2.6100 - 2.5200 1.00 2591 141 0.2498 0.2906 REMARK 3 11 2.5200 - 2.4400 1.00 2614 132 0.2511 0.2841 REMARK 3 12 2.4400 - 2.3700 0.94 2447 128 0.2617 0.3213 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.272 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.512 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 50.75 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 60.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 4789 REMARK 3 ANGLE : 1.158 6479 REMARK 3 CHIRALITY : 0.065 714 REMARK 3 PLANARITY : 0.005 820 REMARK 3 DIHEDRAL : 16.866 1759 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8EQZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-OCT-22. REMARK 100 THE DEPOSITION ID IS D_1000269259. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-SEP-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS-II REMARK 200 BEAMLINE : 17-ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.92010 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33262 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.370 REMARK 200 RESOLUTION RANGE LOW (A) : 29.670 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08100 REMARK 200 FOR THE DATA SET : 13.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.37 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.43 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.1 REMARK 200 DATA REDUNDANCY IN SHELL : 6.50 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.75800 REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3CTB REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.51 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.49 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM BIS-TRIS (PH 5.8), 9% MPD, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 42.68550 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 52.78250 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 44.50200 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 52.78250 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 42.68550 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 44.50200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1630 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26790 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 119 REMARK 465 LYS A 120 REMARK 465 LYS A 121 REMARK 465 GLY A 122 REMARK 465 HIS A 123 REMARK 465 HIS A 124 REMARK 465 HIS A 125 REMARK 465 HIS A 126 REMARK 465 HIS A 127 REMARK 465 HIS A 128 REMARK 465 GLY A 129 REMARK 465 SER A 130 REMARK 465 GLU A 131 REMARK 465 ARG A 132 REMARK 465 THR A 133 REMARK 465 GLY A 134 REMARK 465 THR A 135 REMARK 465 GLN A 136 REMARK 465 PRO A 137 REMARK 465 LEU A 138 REMARK 465 GLY A 139 REMARK 465 VAL A 140 REMARK 465 GLN A 141 REMARK 465 SER A 179 REMARK 465 SER A 180 REMARK 465 GLY A 181 REMARK 465 CYS A 182 REMARK 465 GLU A 183 REMARK 465 LEU A 184 REMARK 465 PRO A 185 REMARK 465 GLU A 186 REMARK 465 SER A 187 REMARK 465 LEU A 188 REMARK 465 GLN A 189 REMARK 465 ALA A 190 REMARK 465 PRO A 191 REMARK 465 SER A 192 REMARK 465 GLY A 432A REMARK 465 SER A 432B REMARK 465 SER A 432C REMARK 465 GLY A 432D REMARK 465 GLY A 432E REMARK 465 SER A 432F REMARK 465 GLY A 432G REMARK 465 GLY A 432H REMARK 465 SER A 432I REMARK 465 SER A 432J REMARK 465 HIS A 432K REMARK 465 SER A 432L REMARK 465 GLY A 459 REMARK 465 SER A 460 REMARK 465 PRO A 461 REMARK 465 SER A 462 REMARK 465 ASP A 463 REMARK 465 ILE A 464 REMARK 465 THR A 465 REMARK 465 THR A 466 REMARK 465 LEU A 467 REMARK 465 SER A 468 REMARK 465 VAL A 469 REMARK 465 GLU A 470 REMARK 465 PRO A 471 REMARK 465 ASP A 472 REMARK 465 MET B 119 REMARK 465 LYS B 120 REMARK 465 LYS B 121 REMARK 465 GLY B 122 REMARK 465 HIS B 123 REMARK 465 HIS B 124 REMARK 465 HIS B 125 REMARK 465 HIS B 126 REMARK 465 HIS B 127 REMARK 465 HIS B 128 REMARK 465 GLY B 129 REMARK 465 SER B 130 REMARK 465 GLU B 131 REMARK 465 ARG B 132 REMARK 465 THR B 133 REMARK 465 GLY B 134 REMARK 465 THR B 135 REMARK 465 GLN B 136 REMARK 465 PRO B 137 REMARK 465 LEU B 138 REMARK 465 GLY B 139 REMARK 465 VAL B 140 REMARK 465 GLN B 141 REMARK 465 LEU B 178 REMARK 465 SER B 179 REMARK 465 SER B 180 REMARK 465 GLY B 181 REMARK 465 CYS B 182 REMARK 465 GLU B 183 REMARK 465 LEU B 184 REMARK 465 PRO B 185 REMARK 465 GLU B 186 REMARK 465 SER B 187 REMARK 465 LEU B 188 REMARK 465 GLN B 189 REMARK 465 ALA B 190 REMARK 465 PRO B 191 REMARK 465 SER B 192 REMARK 465 ARG B 193 REMARK 465 GLU B 194 REMARK 465 THR B 431A REMARK 465 GLY B 431B REMARK 465 SER B 431C REMARK 465 SER B 431D REMARK 465 GLY B 431E REMARK 465 GLY B 431F REMARK 465 SER B 431G REMARK 465 GLY B 431H REMARK 465 GLY B 431I REMARK 465 SER B 431J REMARK 465 SER B 431K REMARK 465 HIS B 431L REMARK 465 SER B 431M REMARK 465 PRO B 461 REMARK 465 SER B 462 REMARK 465 ASP B 463 REMARK 465 ILE B 464 REMARK 465 THR B 465 REMARK 465 THR B 466 REMARK 465 LEU B 467 REMARK 465 SER B 468 REMARK 465 VAL B 469 REMARK 465 GLU B 470 REMARK 465 PRO B 471 REMARK 465 ASP B 472 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 170 CG CD CE NZ REMARK 470 LEU A 178 CG CD1 CD2 REMARK 470 ARG A 193 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 194 CG CD OE1 OE2 REMARK 470 LYS A 210 CG CD CE NZ REMARK 470 GLU A 218 CG CD OE1 OE2 REMARK 470 LYS A 234 CG CD CE NZ REMARK 470 GLU A 270 CG CD OE1 OE2 REMARK 470 PHE A 315 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLN A 316 CG CD OE1 NE2 REMARK 470 ARG A 360 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 445 CG CD1 CD2 REMARK 470 GLU A 447 CG CD OE1 OE2 REMARK 470 ARG A 448 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 458 CG CD OE1 OE2 REMARK 470 GLU B 145 CG CD OE1 OE2 REMARK 470 LYS B 170 CG CD CE NZ REMARK 470 GLU B 195 CG CD OE1 OE2 REMARK 470 ARG B 203 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 204 CG CD CE NZ REMARK 470 GLU B 218 CG CD OE1 OE2 REMARK 470 SER B 231 OG REMARK 470 LYS B 234 CG CD CE NZ REMARK 470 ARG B 303 CG CD NE CZ NH1 NH2 REMARK 470 ASP B 310 CG OD1 OD2 REMARK 470 THR B 311 OG1 CG2 REMARK 470 PHE B 315 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLN B 316 CG CD OE1 NE2 REMARK 470 GLN B 317 CG CD OE1 NE2 REMARK 470 ARG B 360 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 447 CG CD OE1 OE2 REMARK 470 ARG B 448 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 618 O HOH A 629 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 231 -122.47 -112.10 REMARK 500 LYS A 234 -43.25 74.16 REMARK 500 CYS A 301 61.37 -103.09 REMARK 500 ALA A 312 -117.56 -142.00 REMARK 500 ALA A 385 -39.84 -166.75 REMARK 500 HIS A 418 88.76 -154.77 REMARK 500 PHE A 420 -14.32 -152.03 REMARK 500 LYS B 234 -19.42 70.94 REMARK 500 CYS B 301 60.70 -106.69 REMARK 500 PHE B 315 -59.63 68.00 REMARK 500 HIS B 418 88.76 -152.41 REMARK 500 PHE B 420 -15.57 -146.62 REMARK 500 HIS B 449 63.82 -117.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 8E3N RELATED DB: PDB REMARK 900 8E3N CONTAINS THE SAME PROTEIN COMPLEXED WITH RIFAMYCIN S DBREF 8EQZ A 130 432B UNP O75469 NR1I2_HUMAN 130 434 DBREF 8EQZ B 130 431C UNP O75469 NR1I2_HUMAN 130 434 SEQADV 8EQZ MET A 119 UNP O75469 INITIATING METHIONINE SEQADV 8EQZ LYS A 120 UNP O75469 EXPRESSION TAG SEQADV 8EQZ LYS A 121 UNP O75469 EXPRESSION TAG SEQADV 8EQZ GLY A 122 UNP O75469 EXPRESSION TAG SEQADV 8EQZ HIS A 123 UNP O75469 EXPRESSION TAG SEQADV 8EQZ HIS A 124 UNP O75469 EXPRESSION TAG SEQADV 8EQZ HIS A 125 UNP O75469 EXPRESSION TAG SEQADV 8EQZ HIS A 126 UNP O75469 EXPRESSION TAG SEQADV 8EQZ HIS A 127 UNP O75469 EXPRESSION TAG SEQADV 8EQZ HIS A 128 UNP O75469 EXPRESSION TAG SEQADV 8EQZ GLY A 129 UNP O75469 EXPRESSION TAG SEQADV 8EQZ SER A 432C UNP O75469 EXPRESSION TAG SEQADV 8EQZ GLY A 432D UNP O75469 EXPRESSION TAG SEQADV 8EQZ GLY A 432E UNP O75469 EXPRESSION TAG SEQADV 8EQZ SER A 432F UNP O75469 EXPRESSION TAG SEQADV 8EQZ GLY A 432G UNP O75469 EXPRESSION TAG SEQADV 8EQZ GLY A 432H UNP O75469 EXPRESSION TAG SEQADV 8EQZ SER A 432I UNP O75469 EXPRESSION TAG SEQADV 8EQZ SER A 432J UNP O75469 EXPRESSION TAG SEQADV 8EQZ HIS A 432K UNP O75469 EXPRESSION TAG SEQADV 8EQZ SER A 432L UNP O75469 EXPRESSION TAG SEQADV 8EQZ SER A 444 UNP O75469 EXPRESSION TAG SEQADV 8EQZ LEU A 445 UNP O75469 EXPRESSION TAG SEQADV 8EQZ THR A 446 UNP O75469 EXPRESSION TAG SEQADV 8EQZ GLU A 447 UNP O75469 EXPRESSION TAG SEQADV 8EQZ ARG A 448 UNP O75469 EXPRESSION TAG SEQADV 8EQZ HIS A 449 UNP O75469 EXPRESSION TAG SEQADV 8EQZ LYS A 450 UNP O75469 EXPRESSION TAG SEQADV 8EQZ ILE A 451 UNP O75469 EXPRESSION TAG SEQADV 8EQZ LEU A 452 UNP O75469 EXPRESSION TAG SEQADV 8EQZ HIS A 453 UNP O75469 EXPRESSION TAG SEQADV 8EQZ ARG A 454 UNP O75469 EXPRESSION TAG SEQADV 8EQZ LEU A 455 UNP O75469 EXPRESSION TAG SEQADV 8EQZ LEU A 456 UNP O75469 EXPRESSION TAG SEQADV 8EQZ GLN A 457 UNP O75469 EXPRESSION TAG SEQADV 8EQZ GLU A 458 UNP O75469 EXPRESSION TAG SEQADV 8EQZ GLY A 459 UNP O75469 EXPRESSION TAG SEQADV 8EQZ SER A 460 UNP O75469 EXPRESSION TAG SEQADV 8EQZ PRO A 461 UNP O75469 EXPRESSION TAG SEQADV 8EQZ SER A 462 UNP O75469 EXPRESSION TAG SEQADV 8EQZ ASP A 463 UNP O75469 EXPRESSION TAG SEQADV 8EQZ ILE A 464 UNP O75469 EXPRESSION TAG SEQADV 8EQZ THR A 465 UNP O75469 EXPRESSION TAG SEQADV 8EQZ THR A 466 UNP O75469 EXPRESSION TAG SEQADV 8EQZ LEU A 467 UNP O75469 EXPRESSION TAG SEQADV 8EQZ SER A 468 UNP O75469 EXPRESSION TAG SEQADV 8EQZ VAL A 469 UNP O75469 EXPRESSION TAG SEQADV 8EQZ GLU A 470 UNP O75469 EXPRESSION TAG SEQADV 8EQZ PRO A 471 UNP O75469 EXPRESSION TAG SEQADV 8EQZ ASP A 472 UNP O75469 EXPRESSION TAG SEQADV 8EQZ MET B 119 UNP O75469 INITIATING METHIONINE SEQADV 8EQZ LYS B 120 UNP O75469 EXPRESSION TAG SEQADV 8EQZ LYS B 121 UNP O75469 EXPRESSION TAG SEQADV 8EQZ GLY B 122 UNP O75469 EXPRESSION TAG SEQADV 8EQZ HIS B 123 UNP O75469 EXPRESSION TAG SEQADV 8EQZ HIS B 124 UNP O75469 EXPRESSION TAG SEQADV 8EQZ HIS B 125 UNP O75469 EXPRESSION TAG SEQADV 8EQZ HIS B 126 UNP O75469 EXPRESSION TAG SEQADV 8EQZ HIS B 127 UNP O75469 EXPRESSION TAG SEQADV 8EQZ HIS B 128 UNP O75469 EXPRESSION TAG SEQADV 8EQZ GLY B 129 UNP O75469 EXPRESSION TAG SEQADV 8EQZ SER B 431D UNP O75469 EXPRESSION TAG SEQADV 8EQZ GLY B 431E UNP O75469 EXPRESSION TAG SEQADV 8EQZ GLY B 431F UNP O75469 EXPRESSION TAG SEQADV 8EQZ SER B 431G UNP O75469 EXPRESSION TAG SEQADV 8EQZ GLY B 431H UNP O75469 EXPRESSION TAG SEQADV 8EQZ GLY B 431I UNP O75469 EXPRESSION TAG SEQADV 8EQZ SER B 431J UNP O75469 EXPRESSION TAG SEQADV 8EQZ SER B 431K UNP O75469 EXPRESSION TAG SEQADV 8EQZ HIS B 431L UNP O75469 EXPRESSION TAG SEQADV 8EQZ SER B 431M UNP O75469 EXPRESSION TAG SEQADV 8EQZ SER B 444 UNP O75469 EXPRESSION TAG SEQADV 8EQZ LEU B 445 UNP O75469 EXPRESSION TAG SEQADV 8EQZ THR B 446 UNP O75469 EXPRESSION TAG SEQADV 8EQZ GLU B 447 UNP O75469 EXPRESSION TAG SEQADV 8EQZ ARG B 448 UNP O75469 EXPRESSION TAG SEQADV 8EQZ HIS B 449 UNP O75469 EXPRESSION TAG SEQADV 8EQZ LYS B 450 UNP O75469 EXPRESSION TAG SEQADV 8EQZ ILE B 451 UNP O75469 EXPRESSION TAG SEQADV 8EQZ LEU B 452 UNP O75469 EXPRESSION TAG SEQADV 8EQZ HIS B 453 UNP O75469 EXPRESSION TAG SEQADV 8EQZ ARG B 454 UNP O75469 EXPRESSION TAG SEQADV 8EQZ LEU B 455 UNP O75469 EXPRESSION TAG SEQADV 8EQZ LEU B 456 UNP O75469 EXPRESSION TAG SEQADV 8EQZ GLN B 457 UNP O75469 EXPRESSION TAG SEQADV 8EQZ GLU B 458 UNP O75469 EXPRESSION TAG SEQADV 8EQZ GLY B 459 UNP O75469 EXPRESSION TAG SEQADV 8EQZ SER B 460 UNP O75469 EXPRESSION TAG SEQADV 8EQZ PRO B 461 UNP O75469 EXPRESSION TAG SEQADV 8EQZ SER B 462 UNP O75469 EXPRESSION TAG SEQADV 8EQZ ASP B 463 UNP O75469 EXPRESSION TAG SEQADV 8EQZ ILE B 464 UNP O75469 EXPRESSION TAG SEQADV 8EQZ THR B 465 UNP O75469 EXPRESSION TAG SEQADV 8EQZ THR B 466 UNP O75469 EXPRESSION TAG SEQADV 8EQZ LEU B 467 UNP O75469 EXPRESSION TAG SEQADV 8EQZ SER B 468 UNP O75469 EXPRESSION TAG SEQADV 8EQZ VAL B 469 UNP O75469 EXPRESSION TAG SEQADV 8EQZ GLU B 470 UNP O75469 EXPRESSION TAG SEQADV 8EQZ PRO B 471 UNP O75469 EXPRESSION TAG SEQADV 8EQZ ASP B 472 UNP O75469 EXPRESSION TAG SEQRES 1 A 355 MET LYS LYS GLY HIS HIS HIS HIS HIS HIS GLY SER GLU SEQRES 2 A 355 ARG THR GLY THR GLN PRO LEU GLY VAL GLN GLY LEU THR SEQRES 3 A 355 GLU GLU GLN ARG MET MET ILE ARG GLU LEU MET ASP ALA SEQRES 4 A 355 GLN MET LYS THR PHE ASP THR THR PHE SER HIS PHE LYS SEQRES 5 A 355 ASN PHE ARG LEU PRO GLY VAL LEU SER SER GLY CYS GLU SEQRES 6 A 355 LEU PRO GLU SER LEU GLN ALA PRO SER ARG GLU GLU ALA SEQRES 7 A 355 ALA LYS TRP SER GLN VAL ARG LYS ASP LEU CYS SER LEU SEQRES 8 A 355 LYS VAL SER LEU GLN LEU ARG GLY GLU ASP GLY SER VAL SEQRES 9 A 355 TRP ASN TYR LYS PRO PRO ALA ASP SER GLY GLY LYS GLU SEQRES 10 A 355 ILE PHE SER LEU LEU PRO HIS MET ALA ASP MET SER THR SEQRES 11 A 355 TYR MET PHE LYS GLY ILE ILE SER PHE ALA LYS VAL ILE SEQRES 12 A 355 SER TYR PHE ARG ASP LEU PRO ILE GLU ASP GLN ILE SER SEQRES 13 A 355 LEU LEU LYS GLY ALA ALA PHE GLU LEU CYS GLN LEU ARG SEQRES 14 A 355 PHE ASN THR VAL PHE ASN ALA GLU THR GLY THR TRP GLU SEQRES 15 A 355 CYS GLY ARG LEU SER TYR CYS LEU GLU ASP THR ALA GLY SEQRES 16 A 355 GLY PHE GLN GLN LEU LEU LEU GLU PRO MET LEU LYS PHE SEQRES 17 A 355 HIS TYR MET LEU LYS LYS LEU GLN LEU HIS GLU GLU GLU SEQRES 18 A 355 TYR VAL LEU MET GLN ALA ILE SER LEU PHE SER PRO ASP SEQRES 19 A 355 ARG PRO GLY VAL LEU GLN HIS ARG VAL VAL ASP GLN LEU SEQRES 20 A 355 GLN GLU GLN PHE ALA ILE THR LEU LYS SER TYR ILE GLU SEQRES 21 A 355 CYS ASN ARG PRO GLN PRO ALA HIS ARG PHE LEU PHE LEU SEQRES 22 A 355 LYS ILE MET ALA MET LEU THR GLU LEU ARG SER ILE ASN SEQRES 23 A 355 ALA GLN HIS THR GLN ARG LEU LEU ARG ILE GLN ASP ILE SEQRES 24 A 355 HIS PRO PHE ALA THR PRO LEU MET GLN GLU LEU PHE GLY SEQRES 25 A 355 ILE THR GLY SER SER GLY GLY SER GLY GLY SER SER HIS SEQRES 26 A 355 SER SER LEU THR GLU ARG HIS LYS ILE LEU HIS ARG LEU SEQRES 27 A 355 LEU GLN GLU GLY SER PRO SER ASP ILE THR THR LEU SER SEQRES 28 A 355 VAL GLU PRO ASP SEQRES 1 B 355 MET LYS LYS GLY HIS HIS HIS HIS HIS HIS GLY SER GLU SEQRES 2 B 355 ARG THR GLY THR GLN PRO LEU GLY VAL GLN GLY LEU THR SEQRES 3 B 355 GLU GLU GLN ARG MET MET ILE ARG GLU LEU MET ASP ALA SEQRES 4 B 355 GLN MET LYS THR PHE ASP THR THR PHE SER HIS PHE LYS SEQRES 5 B 355 ASN PHE ARG LEU PRO GLY VAL LEU SER SER GLY CYS GLU SEQRES 6 B 355 LEU PRO GLU SER LEU GLN ALA PRO SER ARG GLU GLU ALA SEQRES 7 B 355 ALA LYS TRP SER GLN VAL ARG LYS ASP LEU CYS SER LEU SEQRES 8 B 355 LYS VAL SER LEU GLN LEU ARG GLY GLU ASP GLY SER VAL SEQRES 9 B 355 TRP ASN TYR LYS PRO PRO ALA ASP SER GLY GLY LYS GLU SEQRES 10 B 355 ILE PHE SER LEU LEU PRO HIS MET ALA ASP MET SER THR SEQRES 11 B 355 TYR MET PHE LYS GLY ILE ILE SER PHE ALA LYS VAL ILE SEQRES 12 B 355 SER TYR PHE ARG ASP LEU PRO ILE GLU ASP GLN ILE SER SEQRES 13 B 355 LEU LEU LYS GLY ALA ALA PHE GLU LEU CYS GLN LEU ARG SEQRES 14 B 355 PHE ASN THR VAL PHE ASN ALA GLU THR GLY THR TRP GLU SEQRES 15 B 355 CYS GLY ARG LEU SER TYR CYS LEU GLU ASP THR ALA GLY SEQRES 16 B 355 GLY PHE GLN GLN LEU LEU LEU GLU PRO MET LEU LYS PHE SEQRES 17 B 355 HIS TYR MET LEU LYS LYS LEU GLN LEU HIS GLU GLU GLU SEQRES 18 B 355 TYR VAL LEU MET GLN ALA ILE SER LEU PHE SER PRO ASP SEQRES 19 B 355 ARG PRO GLY VAL LEU GLN HIS ARG VAL VAL ASP GLN LEU SEQRES 20 B 355 GLN GLU GLN PHE ALA ILE THR LEU LYS SER TYR ILE GLU SEQRES 21 B 355 CYS ASN ARG PRO GLN PRO ALA HIS ARG PHE LEU PHE LEU SEQRES 22 B 355 LYS ILE MET ALA MET LEU THR GLU LEU ARG SER ILE ASN SEQRES 23 B 355 ALA GLN HIS THR GLN ARG LEU LEU ARG ILE GLN ASP ILE SEQRES 24 B 355 HIS PRO PHE ALA THR PRO LEU MET GLN GLU LEU PHE GLY SEQRES 25 B 355 ILE THR GLY SER SER GLY GLY SER GLY GLY SER SER HIS SEQRES 26 B 355 SER SER LEU THR GLU ARG HIS LYS ILE LEU HIS ARG LEU SEQRES 27 B 355 LEU GLN GLU GLY SER PRO SER ASP ILE THR THR LEU SER SEQRES 28 B 355 VAL GLU PRO ASP HET WQB A 501 32 HET WQB B 501 32 HETNAM WQB N-[4-(1,1,1,3,3,3-HEXAFLUORO-2-HYDROXYPROPAN-2-YL) HETNAM 2 WQB PHENYL]-N-HEXYLBENZENESULFONAMIDE FORMUL 3 WQB 2(C21 H23 F6 N O3 S) FORMUL 5 HOH *68(H2 O) HELIX 1 AA1 THR A 144 PHE A 162 1 19 HELIX 2 AA2 GLU A 194 LEU A 206 1 13 HELIX 3 AA3 LYS A 234 SER A 238 5 5 HELIX 4 AA4 LEU A 239 VAL A 260 1 22 HELIX 5 AA5 ILE A 261 ASP A 266 1 6 HELIX 6 AA6 PRO A 268 THR A 290 1 23 HELIX 7 AA7 GLY A 314 LEU A 319 1 6 HELIX 8 AA8 GLU A 321 LEU A 333 1 13 HELIX 9 AA9 HIS A 336 PHE A 349 1 14 HELIX 10 AB1 GLN A 358 ARG A 381 1 24 HELIX 11 AB2 PHE A 388 HIS A 418 1 31 HELIX 12 AB3 THR A 422 GLY A 430 1 9 HELIX 13 AB4 LEU A 445 HIS A 449 1 5 HELIX 14 AB5 HIS A 449 GLN A 457 1 9 HELIX 15 AB6 THR B 144 PHE B 162 1 19 HELIX 16 AB7 ALA B 196 SER B 208 1 13 HELIX 17 AB8 LEU B 239 VAL B 260 1 22 HELIX 18 AB9 ILE B 261 ASP B 266 1 6 HELIX 19 AC1 PRO B 268 THR B 290 1 23 HELIX 20 AC2 PHE B 315 LEU B 320 1 6 HELIX 21 AC3 GLU B 321 LEU B 333 1 13 HELIX 22 AC4 HIS B 336 PHE B 349 1 14 HELIX 23 AC5 GLN B 358 ARG B 381 1 24 HELIX 24 AC6 GLN B 383 ARG B 387 5 5 HELIX 25 AC7 PHE B 388 HIS B 418 1 31 HELIX 26 AC8 THR B 422 GLY B 430 1 9 HELIX 27 AC9 LEU B 445 HIS B 449 1 5 HELIX 28 AD1 HIS B 449 GLU B 458 1 10 SHEET 1 AA110 PHE A 292 ASN A 293 0 SHEET 2 AA110 THR A 298 CYS A 301 -1 O THR A 298 N ASN A 293 SHEET 3 AA110 LEU A 304 LEU A 308 -1 O TYR A 306 N TRP A 299 SHEET 4 AA110 VAL A 211 ARG A 216 -1 N SER A 212 O CYS A 307 SHEET 5 AA110 VAL A 222 LYS A 226 -1 O TRP A 223 N LEU A 215 SHEET 6 AA110 VAL B 222 LYS B 226 -1 O LYS B 226 N VAL A 222 SHEET 7 AA110 VAL B 211 ARG B 216 -1 N LEU B 215 O TRP B 223 SHEET 8 AA110 LEU B 304 LEU B 308 -1 O CYS B 307 N SER B 212 SHEET 9 AA110 THR B 298 CYS B 301 -1 N TRP B 299 O TYR B 306 SHEET 10 AA110 PHE B 292 ASN B 293 -1 N ASN B 293 O THR B 298 CRYST1 85.371 89.004 105.565 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011714 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011235 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009473 0.00000