HEADER COMPLEX (ISOMERASE/KINASE) 11-OCT-22 8ER7 TITLE FKBP12-FRB IN COMPLEX WITH COMPOUND 12 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP1A; COMPND 3 CHAIN: A, C, E; COMPND 4 SYNONYM: PPIASE FKBP1A,12 KDA FK506-BINDING PROTEIN,12 KDA FKBP,FKBP- COMPND 5 12,CALSTABIN-1,FK506-BINDING PROTEIN 1A,FKBP-1A,IMMUNOPHILIN FKBP12, COMPND 6 ROTAMASE; COMPND 7 EC: 5.2.1.8; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE; COMPND 11 CHAIN: B, D, F; COMPND 12 EC: 2.7.11.1; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: FKBP1A, FKBP1, FKBP12; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: MTOR; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ANTITUMOR, MTORC1, COMPLEX (ISOMERASE-KINASE) COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.C.A.TOMLINSON,J.K.YANO REVDAT 3 25-OCT-23 8ER7 1 REMARK REVDAT 2 25-JAN-23 8ER7 1 JRNL REVDAT 1 28-DEC-22 8ER7 0 JRNL AUTH G.L.BURNETT,Y.C.YANG,J.B.AGGEN,J.PITZEN,M.K.GLIEDT, JRNL AUTH 2 C.M.SEMKO,A.MARQUEZ,J.W.EVANS,G.WANG,W.S.WON, JRNL AUTH 3 A.C.A.TOMLINSON,G.KISS,C.TZITZILONIS,A.P.THOTTUMKARA, JRNL AUTH 4 J.CREGG,K.T.MELLEM,J.S.CHOI,J.C.LEE,Y.ZHAO,B.J.LEE, JRNL AUTH 5 J.G.MEYEROWITZ,J.E.KNOX,J.JIANG,Z.WANG,D.WILDES,Z.WANG, JRNL AUTH 6 M.SINGH,J.A.M.SMITH,A.L.GILL JRNL TITL DISCOVERY OF RMC-5552, A SELECTIVE BI-STERIC INHIBITOR OF JRNL TITL 2 MTORC1, FOR THE TREATMENT OF MTORC1-ACTIVATED TUMORS. JRNL REF J.MED.CHEM. V. 66 149 2023 JRNL REFN ISSN 0022-2623 JRNL PMID 36533617 JRNL DOI 10.1021/ACS.JMEDCHEM.2C01658 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH P.V.AFONINE,R.W.GROSSE-KUNSTLEVE,N.ECHOLS,J.J.HEADD, REMARK 1 AUTH 2 N.W.MORIARTY,M.MUSTYAKIMOV,T.C.TERWILLIGER,A.URZHUMTSEV, REMARK 1 AUTH 3 P.H.ZWART,P.D.ADAMS REMARK 1 TITL TOWARDS AUTOMATED CRYSTALLOGRAPHIC STRUCTURE REFINEMENT WITH REMARK 1 TITL 2 PHENIX.REFINE. REMARK 1 REF ACTA CRYSTALLOGR D BIOL V. 68 352 2012 REMARK 1 REF 2 CRYSTALLOGR REMARK 1 REFN ESSN 1399-0047 REMARK 1 DOI 10.1107/S0907444912001308 REMARK 2 REMARK 2 RESOLUTION. 3.07 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.07 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.91 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.9 REMARK 3 NUMBER OF REFLECTIONS : 21739 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.242 REMARK 3 R VALUE (WORKING SET) : 0.241 REMARK 3 FREE R VALUE : 0.279 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.250 REMARK 3 FREE R VALUE TEST SET COUNT : 489 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.9100 - 4.4300 0.93 7114 169 0.2143 0.2504 REMARK 3 2 4.4300 - 3.5100 0.98 7131 161 0.2532 0.2888 REMARK 3 3 3.5100 - 3.0700 0.97 7005 159 0.3249 0.3644 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.350 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 32.803 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 92.86 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 119.8 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.013 5233 REMARK 3 ANGLE : 1.498 7062 REMARK 3 CHIRALITY : 0.080 737 REMARK 3 PLANARITY : 0.005 906 REMARK 3 DIHEDRAL : 16.281 2024 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 1:108 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.8059 15.4133 0.2680 REMARK 3 T TENSOR REMARK 3 T11: 1.4666 T22: 0.8466 REMARK 3 T33: 1.4057 T12: 0.0880 REMARK 3 T13: 0.1818 T23: -0.0579 REMARK 3 L TENSOR REMARK 3 L11: 1.4867 L22: 1.3959 REMARK 3 L33: 2.2965 L12: -1.4200 REMARK 3 L13: -0.4604 L23: 0.1376 REMARK 3 S TENSOR REMARK 3 S11: -0.5869 S12: -0.0046 S13: -0.4574 REMARK 3 S21: 0.2525 S22: 0.1875 S23: -0.8623 REMARK 3 S31: 1.2673 S32: 0.4111 S33: 0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN B AND RESID 2018:2112 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.7004 40.7692 0.7576 REMARK 3 T TENSOR REMARK 3 T11: 0.9320 T22: 0.8327 REMARK 3 T33: 0.9043 T12: -0.0635 REMARK 3 T13: -0.0043 T23: 0.0162 REMARK 3 L TENSOR REMARK 3 L11: 2.7112 L22: 3.6142 REMARK 3 L33: 3.0865 L12: 2.1578 REMARK 3 L13: -1.3585 L23: 0.5551 REMARK 3 S TENSOR REMARK 3 S11: -0.4271 S12: 0.0974 S13: 0.0152 REMARK 3 S21: -0.4196 S22: 0.3842 S23: -0.2704 REMARK 3 S31: 0.2775 S32: 0.5074 S33: 0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN C AND RESID 1:108 ) REMARK 3 ORIGIN FOR THE GROUP (A): -47.5002 16.4617 -18.9020 REMARK 3 T TENSOR REMARK 3 T11: 1.3120 T22: 0.8255 REMARK 3 T33: 0.9933 T12: -0.0547 REMARK 3 T13: 0.2236 T23: -0.0167 REMARK 3 L TENSOR REMARK 3 L11: 5.7320 L22: 1.8255 REMARK 3 L33: 1.2497 L12: 2.0235 REMARK 3 L13: 1.8988 L23: 0.0503 REMARK 3 S TENSOR REMARK 3 S11: 0.0773 S12: -0.2793 S13: -0.0260 REMARK 3 S21: 0.0010 S22: 0.0397 S23: -0.2251 REMARK 3 S31: -0.0839 S32: 0.0525 S33: 0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN D AND RESID 2019:2112 ) REMARK 3 ORIGIN FOR THE GROUP (A): -72.5263 20.6703 -21.0531 REMARK 3 T TENSOR REMARK 3 T11: 1.3313 T22: 0.8788 REMARK 3 T33: 0.9979 T12: -0.0271 REMARK 3 T13: 0.1258 T23: 0.0570 REMARK 3 L TENSOR REMARK 3 L11: 4.2157 L22: 1.9741 REMARK 3 L33: 0.9611 L12: -2.1409 REMARK 3 L13: -0.7948 L23: 1.2581 REMARK 3 S TENSOR REMARK 3 S11: 0.1103 S12: 0.3664 S13: 0.0004 REMARK 3 S21: -0.3216 S22: -0.1797 S23: 0.1051 REMARK 3 S31: -0.0749 S32: -0.4758 S33: 0.0000 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: ( CHAIN E AND RESID 2:108 ) REMARK 3 ORIGIN FOR THE GROUP (A): -61.3810 53.1267 -37.9200 REMARK 3 T TENSOR REMARK 3 T11: 0.9192 T22: 1.8796 REMARK 3 T33: 0.9813 T12: -0.0704 REMARK 3 T13: 0.0314 T23: -0.2198 REMARK 3 L TENSOR REMARK 3 L11: 3.1317 L22: 5.2517 REMARK 3 L33: 4.1654 L12: 0.4690 REMARK 3 L13: -0.4473 L23: 1.5132 REMARK 3 S TENSOR REMARK 3 S11: 0.4568 S12: -0.1826 S13: 0.2924 REMARK 3 S21: 0.3502 S22: -0.0375 S23: -0.3883 REMARK 3 S31: -0.8548 S32: 1.9505 S33: 0.0077 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: ( CHAIN F AND RESID 2018:2112 ) REMARK 3 ORIGIN FOR THE GROUP (A): -68.9796 51.6950 -13.9561 REMARK 3 T TENSOR REMARK 3 T11: 0.8788 T22: 1.1679 REMARK 3 T33: 0.9257 T12: -0.0680 REMARK 3 T13: -0.0270 T23: -0.2527 REMARK 3 L TENSOR REMARK 3 L11: 6.9498 L22: 4.0641 REMARK 3 L33: 2.9626 L12: 0.4239 REMARK 3 L13: -1.1732 L23: 0.9748 REMARK 3 S TENSOR REMARK 3 S11: -0.2560 S12: 0.4551 S13: -0.4214 REMARK 3 S21: 0.3846 S22: 0.4358 S23: -0.3966 REMARK 3 S31: -0.0972 S32: 0.8869 S33: 0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8ER7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-DEC-22. REMARK 100 THE DEPOSITION ID IS D_1000269278. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-OCT-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0-7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.99993 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21756 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.070 REMARK 200 RESOLUTION RANGE LOW (A) : 45.910 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.8 REMARK 200 DATA REDUNDANCY : 4.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07200 REMARK 200 FOR THE DATA SET : 11.0600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.07 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.32 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.04270 REMARK 200 FOR SHELL : 2.880 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1FAP REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 69.94 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.09 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 3.0-3.3 M SODIUM FORMATE AND 0.1 M REMARK 280 HEPES PH 7.0-7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 64 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+1/3 REMARK 290 6555 X-Y,X,Z+2/3 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+1/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 84.47167 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 168.94333 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 84.47167 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 168.94333 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 84.47167 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 168.94333 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 84.47167 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 168.94333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY D 2018 REMARK 465 SER E 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE1 GLU A 6 OE1 GLU A 6 8555 2.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 VAL C 99 CB VAL C 99 CG2 -0.128 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 VAL C 99 CA - CB - CG2 ANGL. DEV. = 10.9 DEGREES REMARK 500 ARG F2042 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 82 -155.01 -83.01 REMARK 500 ILE A 91 -65.78 -138.05 REMARK 500 GLN B2063 -61.17 -102.38 REMARK 500 ILE C 8 -63.71 -99.26 REMARK 500 ARG C 14 -41.39 -131.39 REMARK 500 ALA C 82 -94.06 -95.06 REMARK 500 ASP C 101 56.98 -114.98 REMARK 500 ALA D2020 78.49 61.26 REMARK 500 ARG E 14 -41.76 -137.32 REMARK 500 ALA E 82 -72.67 -73.71 REMARK 500 TYR E 83 -60.03 -139.78 REMARK 500 ILE E 91 -65.58 -131.91 REMARK 500 ASP E 101 57.69 -117.97 REMARK 500 REMARK 500 REMARK: NULL DBREF 8ER7 A 2 108 UNP P62942 FKB1A_HUMAN 2 108 DBREF 8ER7 B 2019 2112 UNP B1AKP8 B1AKP8_HUMAN 224 317 DBREF 8ER7 C 2 108 UNP P62942 FKB1A_HUMAN 2 108 DBREF 8ER7 D 2019 2112 UNP B1AKP8 B1AKP8_HUMAN 224 317 DBREF 8ER7 E 2 108 UNP P62942 FKB1A_HUMAN 2 108 DBREF 8ER7 F 2019 2112 UNP B1AKP8 B1AKP8_HUMAN 224 317 SEQADV 8ER7 SER A 1 UNP P62942 EXPRESSION TAG SEQADV 8ER7 GLY B 2018 UNP B1AKP8 EXPRESSION TAG SEQADV 8ER7 SER C 1 UNP P62942 EXPRESSION TAG SEQADV 8ER7 GLY D 2018 UNP B1AKP8 EXPRESSION TAG SEQADV 8ER7 SER E 1 UNP P62942 EXPRESSION TAG SEQADV 8ER7 GLY F 2018 UNP B1AKP8 EXPRESSION TAG SEQRES 1 A 108 SER GLY VAL GLN VAL GLU THR ILE SER PRO GLY ASP GLY SEQRES 2 A 108 ARG THR PHE PRO LYS ARG GLY GLN THR CYS VAL VAL HIS SEQRES 3 A 108 TYR THR GLY MET LEU GLU ASP GLY LYS LYS PHE ASP SER SEQRES 4 A 108 SER ARG ASP ARG ASN LYS PRO PHE LYS PHE MET LEU GLY SEQRES 5 A 108 LYS GLN GLU VAL ILE ARG GLY TRP GLU GLU GLY VAL ALA SEQRES 6 A 108 GLN MET SER VAL GLY GLN ARG ALA LYS LEU THR ILE SER SEQRES 7 A 108 PRO ASP TYR ALA TYR GLY ALA THR GLY HIS PRO GLY ILE SEQRES 8 A 108 ILE PRO PRO HIS ALA THR LEU VAL PHE ASP VAL GLU LEU SEQRES 9 A 108 LEU LYS LEU GLU SEQRES 1 B 95 GLY VAL ALA ILE LEU TRP HIS GLU MET TRP HIS GLU GLY SEQRES 2 B 95 LEU GLU GLU ALA SER ARG LEU TYR PHE GLY GLU ARG ASN SEQRES 3 B 95 VAL LYS GLY MET PHE GLU VAL LEU GLU PRO LEU HIS ALA SEQRES 4 B 95 MET MET GLU ARG GLY PRO GLN THR LEU LYS GLU THR SER SEQRES 5 B 95 PHE ASN GLN ALA TYR GLY ARG ASP LEU MET GLU ALA GLN SEQRES 6 B 95 GLU TRP CYS ARG LYS TYR MET LYS SER GLY ASN VAL LYS SEQRES 7 B 95 ASP LEU THR GLN ALA TRP ASP LEU TYR TYR HIS VAL PHE SEQRES 8 B 95 ARG ARG ILE SER SEQRES 1 C 108 SER GLY VAL GLN VAL GLU THR ILE SER PRO GLY ASP GLY SEQRES 2 C 108 ARG THR PHE PRO LYS ARG GLY GLN THR CYS VAL VAL HIS SEQRES 3 C 108 TYR THR GLY MET LEU GLU ASP GLY LYS LYS PHE ASP SER SEQRES 4 C 108 SER ARG ASP ARG ASN LYS PRO PHE LYS PHE MET LEU GLY SEQRES 5 C 108 LYS GLN GLU VAL ILE ARG GLY TRP GLU GLU GLY VAL ALA SEQRES 6 C 108 GLN MET SER VAL GLY GLN ARG ALA LYS LEU THR ILE SER SEQRES 7 C 108 PRO ASP TYR ALA TYR GLY ALA THR GLY HIS PRO GLY ILE SEQRES 8 C 108 ILE PRO PRO HIS ALA THR LEU VAL PHE ASP VAL GLU LEU SEQRES 9 C 108 LEU LYS LEU GLU SEQRES 1 D 95 GLY VAL ALA ILE LEU TRP HIS GLU MET TRP HIS GLU GLY SEQRES 2 D 95 LEU GLU GLU ALA SER ARG LEU TYR PHE GLY GLU ARG ASN SEQRES 3 D 95 VAL LYS GLY MET PHE GLU VAL LEU GLU PRO LEU HIS ALA SEQRES 4 D 95 MET MET GLU ARG GLY PRO GLN THR LEU LYS GLU THR SER SEQRES 5 D 95 PHE ASN GLN ALA TYR GLY ARG ASP LEU MET GLU ALA GLN SEQRES 6 D 95 GLU TRP CYS ARG LYS TYR MET LYS SER GLY ASN VAL LYS SEQRES 7 D 95 ASP LEU THR GLN ALA TRP ASP LEU TYR TYR HIS VAL PHE SEQRES 8 D 95 ARG ARG ILE SER SEQRES 1 E 108 SER GLY VAL GLN VAL GLU THR ILE SER PRO GLY ASP GLY SEQRES 2 E 108 ARG THR PHE PRO LYS ARG GLY GLN THR CYS VAL VAL HIS SEQRES 3 E 108 TYR THR GLY MET LEU GLU ASP GLY LYS LYS PHE ASP SER SEQRES 4 E 108 SER ARG ASP ARG ASN LYS PRO PHE LYS PHE MET LEU GLY SEQRES 5 E 108 LYS GLN GLU VAL ILE ARG GLY TRP GLU GLU GLY VAL ALA SEQRES 6 E 108 GLN MET SER VAL GLY GLN ARG ALA LYS LEU THR ILE SER SEQRES 7 E 108 PRO ASP TYR ALA TYR GLY ALA THR GLY HIS PRO GLY ILE SEQRES 8 E 108 ILE PRO PRO HIS ALA THR LEU VAL PHE ASP VAL GLU LEU SEQRES 9 E 108 LEU LYS LEU GLU SEQRES 1 F 95 GLY VAL ALA ILE LEU TRP HIS GLU MET TRP HIS GLU GLY SEQRES 2 F 95 LEU GLU GLU ALA SER ARG LEU TYR PHE GLY GLU ARG ASN SEQRES 3 F 95 VAL LYS GLY MET PHE GLU VAL LEU GLU PRO LEU HIS ALA SEQRES 4 F 95 MET MET GLU ARG GLY PRO GLN THR LEU LYS GLU THR SER SEQRES 5 F 95 PHE ASN GLN ALA TYR GLY ARG ASP LEU MET GLU ALA GLN SEQRES 6 F 95 GLU TRP CYS ARG LYS TYR MET LYS SER GLY ASN VAL LYS SEQRES 7 F 95 ASP LEU THR GLN ALA TRP ASP LEU TYR TYR HIS VAL PHE SEQRES 8 F 95 ARG ARG ILE SER HET XZ3 A 201 66 HET XZ3 C 201 66 HET CL D2201 1 HET XZ3 E 201 66 HET CL F2201 1 HETNAM XZ3 (3S,5R,6R,7E,9R,10R,12R,14S,15E,17E,19E,21S,23S,26R, HETNAM 2 XZ3 27R,30R,34AS)-9,27-DIHYDROXY-3-{(2R)-1-[(1S,3R,4R)-4- HETNAM 3 XZ3 HYDROXY-3-METHOXYCYCLOHEXYL]PROPAN-2-YL}-5,10,21- HETNAM 4 XZ3 TRIMETHOXY-6,8,12,14,20,26-HEXAMETHYL-5,6,9,10,12,13, HETNAM 5 XZ3 14,21,22,23,24,25,26,27,32,33,34,34A-OCTADECAHYDRO-3H- HETNAM 6 XZ3 23,27-EPOXYPYRIDO[2,1-C][1,4]OXAZACYCLOHENTRIACONTINE- HETNAM 7 XZ3 1,11,28,29(4H,31H)-TETRONE HETNAM CL CHLORIDE ION FORMUL 7 XZ3 3(C52 H83 N O13) FORMUL 9 CL 2(CL 1-) FORMUL 12 HOH *4(H2 O) HELIX 1 AA1 SER A 40 ASN A 44 1 5 HELIX 2 AA2 ILE A 57 MET A 67 1 11 HELIX 3 AA3 LEU B 2022 ARG B 2042 1 21 HELIX 4 AA4 ASN B 2043 GLY B 2061 1 19 HELIX 5 AA5 THR B 2064 GLY B 2092 1 29 HELIX 6 AA6 ASN B 2093 SER B 2112 1 20 HELIX 7 AA7 SER C 40 ASN C 44 1 5 HELIX 8 AA8 ILE C 57 GLN C 66 1 10 HELIX 9 AA9 LEU D 2022 GLY D 2040 1 19 HELIX 10 AB1 ASN D 2043 ARG D 2060 1 18 HELIX 11 AB2 THR D 2064 GLY D 2092 1 29 HELIX 12 AB3 ASN D 2093 SER D 2112 1 20 HELIX 13 AB4 ILE E 57 VAL E 64 1 8 HELIX 14 AB5 SER E 78 TYR E 83 1 6 HELIX 15 AB6 LEU F 2022 PHE F 2039 1 18 HELIX 16 AB7 ASN F 2043 GLY F 2061 1 19 HELIX 17 AB8 THR F 2064 GLY F 2092 1 29 HELIX 18 AB9 ASN F 2093 SER F 2112 1 20 SHEET 1 AA1 5 VAL A 3 SER A 9 0 SHEET 2 AA1 5 GLN A 71 ILE A 77 -1 O LYS A 74 N GLU A 6 SHEET 3 AA1 5 LEU A 98 LYS A 106 -1 O PHE A 100 N LEU A 75 SHEET 4 AA1 5 THR A 22 MET A 30 -1 N THR A 28 O ASP A 101 SHEET 5 AA1 5 LYS A 36 SER A 39 -1 O ASP A 38 N GLY A 29 SHEET 1 AA2 5 VAL A 3 SER A 9 0 SHEET 2 AA2 5 GLN A 71 ILE A 77 -1 O LYS A 74 N GLU A 6 SHEET 3 AA2 5 LEU A 98 LYS A 106 -1 O PHE A 100 N LEU A 75 SHEET 4 AA2 5 THR A 22 MET A 30 -1 N THR A 28 O ASP A 101 SHEET 5 AA2 5 PHE A 47 MET A 50 -1 O PHE A 47 N VAL A 25 SHEET 1 AA3 5 VAL C 3 SER C 9 0 SHEET 2 AA3 5 ARG C 72 ILE C 77 -1 O LYS C 74 N GLU C 6 SHEET 3 AA3 5 LEU C 98 PHE C 100 -1 O PHE C 100 N LEU C 75 SHEET 4 AA3 5 THR C 28 LEU C 31 -1 N MET C 30 O VAL C 99 SHEET 5 AA3 5 LYS C 36 SER C 39 -1 O ASP C 38 N GLY C 29 SHEET 1 AA4 3 PHE C 47 MET C 50 0 SHEET 2 AA4 3 THR C 22 HIS C 26 -1 N VAL C 25 O PHE C 47 SHEET 3 AA4 3 GLU C 103 GLU C 108 -1 O GLU C 103 N HIS C 26 SHEET 1 AA5 5 VAL E 3 SER E 9 0 SHEET 2 AA5 5 ARG E 72 ILE E 77 -1 O ARG E 72 N SER E 9 SHEET 3 AA5 5 LEU E 98 PHE E 100 -1 O PHE E 100 N LEU E 75 SHEET 4 AA5 5 THR E 28 LEU E 31 -1 N MET E 30 O VAL E 99 SHEET 5 AA5 5 LYS E 36 SER E 39 -1 O ASP E 38 N GLY E 29 SHEET 1 AA6 3 PHE E 47 MET E 50 0 SHEET 2 AA6 3 THR E 22 HIS E 26 -1 N VAL E 25 O PHE E 47 SHEET 3 AA6 3 GLU E 103 LEU E 107 -1 O GLU E 103 N HIS E 26 CRYST1 125.080 125.080 253.415 90.00 90.00 120.00 P 64 2 2 36 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007995 0.004616 0.000000 0.00000 SCALE2 0.000000 0.009232 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003946 0.00000