HEADER STRUCTURAL PROTEIN 21-OCT-22 8EW5 TITLE THE STRUCTURE OF FLIGHTIN WITHIN MYOSIN THICK FILAMENTS FROM BOMBUS TITLE 2 IGNITUS FLIGHT MUSCLE COMPND MOL_ID: 1; COMPND 2 MOLECULE: FLIGHTIN; COMPND 3 CHAIN: A SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOMBUS IGNITUS; SOURCE 3 ORGANISM_TAXID: 130704 KEYWDS STRIATED MUSCLE, REGULATORY PROTEIN, MYOSIN-BINDING PROTEIN, KEYWDS 2 STRUCTURAL PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR J.LI,H.RAHMANI,F.ABBASI YEGANEH,H.RASTEGARPOUYANI,D.W.TAYLOR, AUTHOR 2 N.B.WOOD,M.J.PREVIS,H.IWAMOTO,K.A.TAYLOR REVDAT 3 19-JUN-24 8EW5 1 REMARK REVDAT 2 18-JAN-23 8EW5 1 JRNL REVDAT 1 04-JAN-23 8EW5 0 JRNL AUTH J.LI,H.RAHMANI,F.ABBASI YEGANEH,H.RASTEGARPOUYANI, JRNL AUTH 2 D.W.TAYLOR,N.B.WOOD,M.J.PREVIS,H.IWAMOTO,K.A.TAYLOR JRNL TITL STRUCTURE OF THE FLIGHT MUSCLE THICK FILAMENT FROM THE JRNL TITL 2 BUMBLE BEE, BOMBUS IGNITUS , AT 6 ANGSTROM RESOLUTION. JRNL REF INT J MOL SCI V. 24 2022 JRNL REFN ESSN 1422-0067 JRNL PMID 36613818 JRNL DOI 10.3390/IJMS24010377 REMARK 2 REMARK 2 RESOLUTION. 6.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : NULL REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : FLEXIBLE FIT REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 6.000 REMARK 3 NUMBER OF PARTICLES : 11000 REMARK 3 CTF CORRECTION METHOD : NONE REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 8EW5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-OCT-22. REMARK 100 THE DEPOSITION ID IS D_1000269495. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : FILAMENT REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : BOMBUS IGNITUS FLIGHT MUSCLE REMARK 245 THICK FILAMENT REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 6.80 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 BIOQUANTUM (6K X REMARK 245 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 800.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2500.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 6000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 TRP A 1 REMARK 465 ALA A 2 REMARK 465 ASP A 3 REMARK 465 GLU A 4 REMARK 465 GLU A 5 REMARK 465 PRO A 6 REMARK 465 ALA A 7 REMARK 465 PRO A 8 REMARK 465 TRP A 9 REMARK 465 ASP A 10 REMARK 465 ILE A 11 REMARK 465 GLU A 12 REMARK 465 GLU A 13 REMARK 465 THR A 14 REMARK 465 PRO A 15 REMARK 465 ALA A 16 REMARK 465 GLU A 17 REMARK 465 GLN A 18 REMARK 465 ALA A 19 REMARK 465 PRO A 20 REMARK 465 GLU A 21 REMARK 465 ALA A 22 REMARK 465 SER A 23 REMARK 465 ALA A 24 REMARK 465 GLU A 25 REMARK 465 SER A 26 REMARK 465 ALA A 27 REMARK 465 ALA A 28 REMARK 465 PRO A 29 REMARK 465 ALA A 30 REMARK 465 ALA A 31 REMARK 465 GLU A 32 REMARK 465 ALA A 33 REMARK 465 ALA A 34 REMARK 465 THR A 35 REMARK 465 GLY A 36 REMARK 465 GLU A 37 REMARK 465 LYS A 38 REMARK 465 PRO A 39 REMARK 465 LYS A 40 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 50 -71.25 63.38 REMARK 500 TRP A 55 31.04 -90.10 REMARK 500 VAL A 56 -125.41 60.87 REMARK 500 LEU A 59 166.49 59.61 REMARK 500 ILE A 126 -162.63 -124.12 REMARK 500 ASN A 127 52.59 71.61 REMARK 500 HIS A 130 9.51 56.77 REMARK 500 PRO A 132 51.52 -92.15 REMARK 500 TYR A 137 164.04 67.10 REMARK 500 ARG A 140 -150.65 58.57 REMARK 500 TYR A 142 57.87 -91.87 REMARK 500 LYS A 149 -157.88 59.89 REMARK 500 ILE A 150 -83.10 52.32 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-28208 RELATED DB: EMDB DBREF 8EW5 A 0 151 PDB 8EW5 8EW5 0 151 SEQRES 1 A 152 MET TRP ALA ASP GLU GLU PRO ALA PRO TRP ASP ILE GLU SEQRES 2 A 152 GLU THR PRO ALA GLU GLN ALA PRO GLU ALA SER ALA GLU SEQRES 3 A 152 SER ALA ALA PRO ALA ALA GLU ALA ALA THR GLY GLU LYS SEQRES 4 A 152 PRO LYS ILE LYS LEU GLU LYS ILE GLU PRO PRO HIS TYR SEQRES 5 A 152 ASN HIS HIS TRP VAL ARG PRO LEU PHE LEU ASN TYR ALA SEQRES 6 A 152 TYR TYR LEU TYR GLU TYR ARG LYS ASN TYR TYR ASN ASP SEQRES 7 A 152 VAL ILE ASP TYR LEU ASN GLN ARG GLU LYS GLY ILE PHE SEQRES 8 A 152 ARG GLU PRO PRO ARG ALA GLN GLU TRP ALA GLU ARG ALA SEQRES 9 A 152 MET ARG THR TYR ASP GLU LYS ASN THR ASP LYS SER PHE SEQRES 10 A 152 LYS ARG SER ALA ASP MET LYS TYR ILE ILE ASN MET ARG SEQRES 11 A 152 HIS GLU PRO ARG TYR TYR SER TYR HIS THR ARG ALA TYR SEQRES 12 A 152 TYR SER LEU LYS TYR GLN LYS ILE LEU HELIX 1 AA1 TYR A 63 GLY A 88 1 26 HELIX 2 AA2 GLU A 98 ASN A 111 1 14 HELIX 3 AA3 LYS A 117 TYR A 124 1 8 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000