HEADER IMMUNE SYSTEM 21-OCT-22 8EW6 TITLE ANTI-HUMAN CD8 VHH COMPLEX WITH CD8 ALPHA COMPND MOL_ID: 1; COMPND 2 MOLECULE: T-CELL SURFACE GLYCOPROTEIN CD8 ALPHA CHAIN; COMPND 3 CHAIN: W; COMPND 4 SYNONYM: T-LYMPHOCYTE DIFFERENTIATION ANTIGEN T8/LEU-2; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: ANTI-CD8 ALPHA VHH; COMPND 8 CHAIN: V; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CD8A, MAL; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: LAMA GLAMA; SOURCE 10 ORGANISM_TAXID: 9844; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS IMMUNE SYSTEM, CD8A, VHH, PET IMAGING EXPDTA X-RAY DIFFRACTION AUTHOR J.R.KIEFER,S.WILLIAMS,C.W.DAVIES,J.T.KOERBER,S.K.SRIRAMAN,Y.P.YIN REVDAT 2 01-FEB-23 8EW6 1 JRNL REVDAT 1 23-NOV-22 8EW6 0 JRNL AUTH S.K.SRIRAMAN,C.W.DAVIES,H.GILL,J.R.KIEFER,J.YIN,A.OGASAWARA, JRNL AUTH 2 A.URRUTIA,V.JAVINAL,Z.LIN,D.SESHASAYEE,R.ABRAHAM,P.HAAS, JRNL AUTH 3 C.KOTH,J.MARIK,J.T.KOERBER,S.P.WILLIAMS JRNL TITL DEVELOPMENT OF AN 18 F-LABELED ANTI-HUMAN CD8 VHH FOR JRNL TITL 2 SAME-DAY IMMUNOPET IMAGING. JRNL REF EUR J NUCL MED MOL IMAGING V. 50 679 2023 JRNL REFN ISSN 1619-7089 JRNL PMID 36346438 JRNL DOI 10.1007/S00259-022-05998-0 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.16_3549 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.48 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.450 REMARK 3 COMPLETENESS FOR RANGE (%) : 90.4 REMARK 3 NUMBER OF REFLECTIONS : 16886 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.245 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 854 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 32.4800 - 3.4587 1.00 3008 146 0.1636 0.1900 REMARK 3 2 3.4587 - 2.7457 1.00 2948 165 0.2116 0.2821 REMARK 3 3 2.7457 - 2.3988 0.98 2873 163 0.2488 0.3022 REMARK 3 4 2.3988 - 2.1795 0.92 2713 154 0.2506 0.3013 REMARK 3 5 2.1795 - 2.0233 0.83 2411 128 0.2446 0.2661 REMARK 3 6 2.0233 - 1.9040 0.70 2079 98 0.2639 0.3501 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.460 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 43.93 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 18 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'V' AND (RESID 1 THROUGH 17 ) REMARK 3 ORIGIN FOR THE GROUP (A): -49.1983 34.1292 23.4846 REMARK 3 T TENSOR REMARK 3 T11: 0.3849 T22: 0.4376 REMARK 3 T33: 0.3861 T12: 0.0797 REMARK 3 T13: 0.0750 T23: -0.0570 REMARK 3 L TENSOR REMARK 3 L11: 1.5524 L22: 1.3628 REMARK 3 L33: 1.6225 L12: -1.1191 REMARK 3 L13: -0.6117 L23: -0.4928 REMARK 3 S TENSOR REMARK 3 S11: 0.2625 S12: -0.7336 S13: 0.4630 REMARK 3 S21: 0.2418 S22: -0.3973 S23: 0.1741 REMARK 3 S31: -0.0185 S32: -0.2743 S33: -0.0027 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'V' AND (RESID 18 THROUGH 39 ) REMARK 3 ORIGIN FOR THE GROUP (A): -45.2840 24.7041 19.8473 REMARK 3 T TENSOR REMARK 3 T11: 0.3405 T22: 0.3591 REMARK 3 T33: 0.2205 T12: 0.0613 REMARK 3 T13: 0.0191 T23: 0.0428 REMARK 3 L TENSOR REMARK 3 L11: 2.5117 L22: 1.3975 REMARK 3 L33: 2.1964 L12: 0.2003 REMARK 3 L13: -0.1450 L23: 0.9112 REMARK 3 S TENSOR REMARK 3 S11: -0.0455 S12: -0.2963 S13: -0.0284 REMARK 3 S21: 0.1672 S22: -0.1563 S23: 0.2510 REMARK 3 S31: 0.2951 S32: 0.3218 S33: -0.0001 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'V' AND (RESID 40 THROUGH 52 ) REMARK 3 ORIGIN FOR THE GROUP (A): -42.4827 32.5350 12.5399 REMARK 3 T TENSOR REMARK 3 T11: 0.3871 T22: 0.3777 REMARK 3 T33: 0.4650 T12: 0.0842 REMARK 3 T13: -0.0281 T23: 0.0405 REMARK 3 L TENSOR REMARK 3 L11: 0.6082 L22: 0.3757 REMARK 3 L33: 0.7229 L12: 0.1655 REMARK 3 L13: -0.4208 L23: 0.3834 REMARK 3 S TENSOR REMARK 3 S11: 0.4180 S12: 0.2047 S13: 0.4343 REMARK 3 S21: -0.4755 S22: -0.0698 S23: 0.1354 REMARK 3 S31: -0.1197 S32: 0.1354 S33: 0.0642 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'V' AND (RESID 53 THROUGH 68 ) REMARK 3 ORIGIN FOR THE GROUP (A): -34.0367 29.1111 18.2136 REMARK 3 T TENSOR REMARK 3 T11: 0.3005 T22: 0.5616 REMARK 3 T33: 0.3308 T12: -0.0118 REMARK 3 T13: -0.0717 T23: -0.0432 REMARK 3 L TENSOR REMARK 3 L11: 1.3298 L22: 0.6947 REMARK 3 L33: 1.3828 L12: -0.4269 REMARK 3 L13: -0.3607 L23: 0.9603 REMARK 3 S TENSOR REMARK 3 S11: 0.1027 S12: -0.3987 S13: 0.4758 REMARK 3 S21: 0.1100 S22: 0.2072 S23: -0.4529 REMARK 3 S31: -0.1857 S32: 0.8479 S33: 0.0014 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'V' AND (RESID 69 THROUGH 105 ) REMARK 3 ORIGIN FOR THE GROUP (A): -41.8137 30.2512 19.8915 REMARK 3 T TENSOR REMARK 3 T11: 0.2934 T22: 0.3562 REMARK 3 T33: 0.2328 T12: 0.0315 REMARK 3 T13: -0.0575 T23: -0.0152 REMARK 3 L TENSOR REMARK 3 L11: 3.2685 L22: 2.1803 REMARK 3 L33: 2.9363 L12: -0.5181 REMARK 3 L13: -0.4787 L23: 1.4687 REMARK 3 S TENSOR REMARK 3 S11: -0.0322 S12: -0.5307 S13: 0.2805 REMARK 3 S21: 0.1933 S22: 0.0574 S23: -0.0999 REMARK 3 S31: -0.0380 S32: 0.2529 S33: 0.0003 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'V' AND (RESID 106 THROUGH 123 ) REMARK 3 ORIGIN FOR THE GROUP (A): -47.6059 30.7230 13.4474 REMARK 3 T TENSOR REMARK 3 T11: 0.4834 T22: 0.3334 REMARK 3 T33: 0.3633 T12: 0.0634 REMARK 3 T13: -0.0073 T23: 0.0768 REMARK 3 L TENSOR REMARK 3 L11: 2.3507 L22: 0.8535 REMARK 3 L33: 0.7726 L12: -0.2064 REMARK 3 L13: -0.2014 L23: 0.5704 REMARK 3 S TENSOR REMARK 3 S11: 0.2356 S12: 0.1641 S13: 0.4429 REMARK 3 S21: -0.4533 S22: -0.1674 S23: 0.0961 REMARK 3 S31: -0.4327 S32: -0.1062 S33: 0.0082 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'W' AND (RESID 1 THROUGH 17 ) REMARK 3 ORIGIN FOR THE GROUP (A): -37.1340 -1.1919 17.6563 REMARK 3 T TENSOR REMARK 3 T11: 0.5186 T22: 0.4658 REMARK 3 T33: 0.5423 T12: 0.0816 REMARK 3 T13: 0.0493 T23: 0.1577 REMARK 3 L TENSOR REMARK 3 L11: 0.2090 L22: 0.8607 REMARK 3 L33: 1.8856 L12: -0.2851 REMARK 3 L13: -0.3060 L23: -0.1589 REMARK 3 S TENSOR REMARK 3 S11: -0.1008 S12: -0.0893 S13: -0.7385 REMARK 3 S21: 0.9785 S22: 0.1037 S23: -0.5394 REMARK 3 S31: 0.0785 S32: -0.0130 S33: 0.0010 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'W' AND (RESID 18 THROUGH 24 ) REMARK 3 ORIGIN FOR THE GROUP (A): -37.8568 5.6611 13.6622 REMARK 3 T TENSOR REMARK 3 T11: 0.3300 T22: 0.3906 REMARK 3 T33: 0.4491 T12: 0.1158 REMARK 3 T13: 0.0509 T23: 0.0970 REMARK 3 L TENSOR REMARK 3 L11: 0.0452 L22: 0.5190 REMARK 3 L33: 0.3300 L12: -0.0524 REMARK 3 L13: 0.1300 L23: 0.0781 REMARK 3 S TENSOR REMARK 3 S11: -0.4465 S12: 0.2417 S13: 0.3301 REMARK 3 S21: -0.3016 S22: 0.1443 S23: 1.4158 REMARK 3 S31: 0.0645 S32: -0.3472 S33: -0.0027 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'W' AND (RESID 25 THROUGH 31 ) REMARK 3 ORIGIN FOR THE GROUP (A): -30.7001 17.9440 9.4978 REMARK 3 T TENSOR REMARK 3 T11: 0.4639 T22: 0.4233 REMARK 3 T33: 0.2835 T12: 0.0824 REMARK 3 T13: -0.0345 T23: 0.1147 REMARK 3 L TENSOR REMARK 3 L11: 0.0805 L22: 0.2743 REMARK 3 L33: 0.0108 L12: 0.1734 REMARK 3 L13: 0.0257 L23: 0.0157 REMARK 3 S TENSOR REMARK 3 S11: 0.1323 S12: 0.1408 S13: 0.3169 REMARK 3 S21: -0.5326 S22: -0.4449 S23: 0.3026 REMARK 3 S31: 0.3127 S32: 0.6099 S33: 0.0014 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'W' AND (RESID 32 THROUGH 39 ) REMARK 3 ORIGIN FOR THE GROUP (A): -31.7098 0.5720 6.5404 REMARK 3 T TENSOR REMARK 3 T11: 0.4498 T22: 0.2658 REMARK 3 T33: 0.6757 T12: 0.0625 REMARK 3 T13: 0.2185 T23: 0.0821 REMARK 3 L TENSOR REMARK 3 L11: 0.4372 L22: 0.0284 REMARK 3 L33: 0.4226 L12: 0.0117 REMARK 3 L13: 0.4655 L23: 0.0473 REMARK 3 S TENSOR REMARK 3 S11: -0.2053 S12: -0.3343 S13: -0.1968 REMARK 3 S21: -0.0233 S22: 0.3028 S23: -0.3375 REMARK 3 S31: -0.1107 S32: 0.1916 S33: 0.0000 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'W' AND (RESID 40 THROUGH 46 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.0796 -9.9108 6.6281 REMARK 3 T TENSOR REMARK 3 T11: 0.5355 T22: 0.3565 REMARK 3 T33: 0.7604 T12: -0.0100 REMARK 3 T13: 0.1865 T23: -0.0303 REMARK 3 L TENSOR REMARK 3 L11: 0.1602 L22: 0.1065 REMARK 3 L33: 0.1418 L12: 0.0072 REMARK 3 L13: 0.0500 L23: -0.1078 REMARK 3 S TENSOR REMARK 3 S11: 0.4656 S12: -0.5036 S13: -0.1544 REMARK 3 S21: -0.6989 S22: -0.1811 S23: -0.4535 REMARK 3 S31: 0.3986 S32: 0.1783 S33: 0.0045 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'W' AND (RESID 47 THROUGH 53 ) REMARK 3 ORIGIN FOR THE GROUP (A): -35.1206 4.3731 1.6522 REMARK 3 T TENSOR REMARK 3 T11: 0.3674 T22: 0.2127 REMARK 3 T33: 0.4436 T12: 0.0193 REMARK 3 T13: 0.1245 T23: 0.0168 REMARK 3 L TENSOR REMARK 3 L11: 0.1867 L22: 0.0939 REMARK 3 L33: 0.4478 L12: 0.1178 REMARK 3 L13: 0.0841 L23: -0.0393 REMARK 3 S TENSOR REMARK 3 S11: 0.1738 S12: 0.1357 S13: -0.5683 REMARK 3 S21: -1.0280 S22: 0.0025 S23: -0.4302 REMARK 3 S31: -0.1227 S32: -0.1297 S33: -0.0001 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'W' AND (RESID 54 THROUGH 73 ) REMARK 3 ORIGIN FOR THE GROUP (A): -43.1621 5.9196 4.5974 REMARK 3 T TENSOR REMARK 3 T11: 0.4486 T22: 0.4208 REMARK 3 T33: 0.6525 T12: 0.0438 REMARK 3 T13: -0.0038 T23: -0.1101 REMARK 3 L TENSOR REMARK 3 L11: 0.7858 L22: 0.3811 REMARK 3 L33: 1.5536 L12: 0.2264 REMARK 3 L13: 0.8125 L23: -0.2676 REMARK 3 S TENSOR REMARK 3 S11: -0.1246 S12: 0.8813 S13: -0.4567 REMARK 3 S21: -0.9915 S22: -0.0433 S23: 0.9284 REMARK 3 S31: -0.3468 S32: 0.0926 S33: 0.0008 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'W' AND (RESID 74 THROUGH 81 ) REMARK 3 ORIGIN FOR THE GROUP (A): -40.6306 6.3258 10.2359 REMARK 3 T TENSOR REMARK 3 T11: 0.3410 T22: 0.2919 REMARK 3 T33: 0.4405 T12: 0.0984 REMARK 3 T13: 0.0275 T23: 0.0835 REMARK 3 L TENSOR REMARK 3 L11: 0.4207 L22: 0.0512 REMARK 3 L33: 0.4403 L12: -0.0868 REMARK 3 L13: -0.2490 L23: 0.1697 REMARK 3 S TENSOR REMARK 3 S11: -0.3162 S12: -0.3006 S13: -0.7440 REMARK 3 S21: 0.1225 S22: 0.1521 S23: 0.4705 REMARK 3 S31: 0.1124 S32: 0.0532 S33: -0.0096 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'W' AND (RESID 82 THROUGH 89 ) REMARK 3 ORIGIN FOR THE GROUP (A): -39.4616 -12.1501 9.2503 REMARK 3 T TENSOR REMARK 3 T11: 0.5889 T22: 0.3811 REMARK 3 T33: 0.7756 T12: 0.0614 REMARK 3 T13: 0.2456 T23: 0.0936 REMARK 3 L TENSOR REMARK 3 L11: 2.1202 L22: 0.1796 REMARK 3 L33: 2.2957 L12: -0.0229 REMARK 3 L13: -1.9466 L23: -0.2777 REMARK 3 S TENSOR REMARK 3 S11: -0.1548 S12: 1.3812 S13: -0.3735 REMARK 3 S21: -0.9777 S22: -0.6526 S23: -0.2860 REMARK 3 S31: 2.0354 S32: -0.1405 S33: -0.3224 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'W' AND (RESID 90 THROUGH 98 ) REMARK 3 ORIGIN FOR THE GROUP (A): -29.4204 3.2751 8.8837 REMARK 3 T TENSOR REMARK 3 T11: 0.3059 T22: 0.3271 REMARK 3 T33: 0.6280 T12: 0.0646 REMARK 3 T13: 0.1122 T23: 0.0807 REMARK 3 L TENSOR REMARK 3 L11: 0.6550 L22: 0.5293 REMARK 3 L33: 0.9932 L12: 0.6129 REMARK 3 L13: 0.1994 L23: -0.0874 REMARK 3 S TENSOR REMARK 3 S11: -0.2361 S12: 0.2195 S13: -0.8473 REMARK 3 S21: 0.7451 S22: 0.3005 S23: 0.0390 REMARK 3 S31: -0.4581 S32: 0.1183 S33: 0.0256 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'W' AND (RESID 99 THROUGH 104 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.2583 12.3795 5.7551 REMARK 3 T TENSOR REMARK 3 T11: 0.5438 T22: 0.4998 REMARK 3 T33: 0.4980 T12: 0.0979 REMARK 3 T13: 0.0188 T23: 0.0723 REMARK 3 L TENSOR REMARK 3 L11: 1.4830 L22: 2.1680 REMARK 3 L33: 0.4251 L12: 1.7595 REMARK 3 L13: -0.5948 L23: -0.6863 REMARK 3 S TENSOR REMARK 3 S11: -0.3416 S12: 0.3852 S13: -0.7908 REMARK 3 S21: -0.7574 S22: 0.2753 S23: -1.1842 REMARK 3 S31: -0.4076 S32: 0.1573 S33: -0.0172 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'W' AND (RESID 105 THROUGH 116 ) REMARK 3 ORIGIN FOR THE GROUP (A): -31.8664 -6.3091 18.4000 REMARK 3 T TENSOR REMARK 3 T11: 0.4220 T22: 0.4980 REMARK 3 T33: 0.7397 T12: 0.0522 REMARK 3 T13: 0.0522 T23: 0.4369 REMARK 3 L TENSOR REMARK 3 L11: 4.0673 L22: 5.5476 REMARK 3 L33: 5.1063 L12: 4.4951 REMARK 3 L13: -4.3902 L23: -4.1946 REMARK 3 S TENSOR REMARK 3 S11: 0.4538 S12: -1.6351 S13: -0.2087 REMARK 3 S21: 1.3128 S22: -0.3911 S23: 0.5221 REMARK 3 S31: -0.4153 S32: 0.8292 S33: 0.3334 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8EW6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-OCT-22. REMARK 100 THE DEPOSITION ID IS D_1000269500. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-OCT-17 REMARK 200 TEMPERATURE (KELVIN) : 93 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00001 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16891 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 35.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.9 REMARK 200 DATA REDUNDANCY : 2.900 REMARK 200 R MERGE (I) : 0.04800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.93 REMARK 200 COMPLETENESS FOR SHELL (%) : 69.5 REMARK 200 DATA REDUNDANCY IN SHELL : 2.40 REMARK 200 R MERGE FOR SHELL (I) : 0.25400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.89 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.05 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15% PEG 3350 AND 0.1M SUCCINIC ACID PH REMARK 280 7.0, VAPOR DIFFUSION, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 28.55750 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.77700 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 28.55750 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 41.77700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3910 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21990 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -20.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: W, V REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -57.11500 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH V 232 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO W 57 REMARK 465 LYS W 58 REMARK 465 ALA W 59 REMARK 465 ALA W 60 REMARK 465 GLU W 61 REMARK 465 GLY W 62 REMARK 465 LEU W 63 REMARK 465 ASP W 64 REMARK 465 THR W 65 REMARK 465 THR W 117 REMARK 465 THR W 118 REMARK 465 THR W 119 REMARK 465 PRO W 120 REMARK 465 GLY W 121 REMARK 465 ASN W 122 REMARK 465 SER W 123 REMARK 465 HIS W 124 REMARK 465 HIS W 125 REMARK 465 HIS W 126 REMARK 465 HIS W 127 REMARK 465 HIS W 128 REMARK 465 HIS W 129 REMARK 465 ALA V -12 REMARK 465 PRO V -11 REMARK 465 HIS V -10 REMARK 465 HIS V -9 REMARK 465 HIS V -8 REMARK 465 HIS V -7 REMARK 465 HIS V -6 REMARK 465 HIS V -5 REMARK 465 ASP V -4 REMARK 465 ASP V -3 REMARK 465 ASP V -2 REMARK 465 ASP V -1 REMARK 465 LYS V 0 REMARK 465 SER V 124 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN W 66 CG CD OE1 NE2 REMARK 470 SER W 100 OG REMARK 470 GLU V 1 CG CD OE1 OE2 REMARK 470 GLN V 13 CG CD OE1 NE2 REMARK 470 LYS V 43 CG CD CE NZ REMARK 470 LYS V 65 CG CD CE NZ REMARK 470 GLU V 89 CG CD OE1 OE2 REMARK 470 GLU V 108 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU W 49 -61.05 -95.29 REMARK 500 SER W 53 -159.78 -126.78 REMARK 500 ASP W 83 71.42 55.47 REMARK 500 ASN W 99 78.48 45.35 REMARK 500 SER W 100 -18.59 72.72 REMARK 500 VAL V 48 -65.43 -124.23 REMARK 500 ARG V 67 -52.56 -134.45 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7UVF RELATED DB: PDB REMARK 900 ANTI-CD8 ALPHA FAB COMPLEX WITH CD8 ALPHA DBREF 8EW6 W 1 120 UNP P01732 CD8A_HUMAN 22 141 DBREF 8EW6 V -12 124 PDB 8EW6 8EW6 -12 124 SEQADV 8EW6 GLY W 121 UNP P01732 EXPRESSION TAG SEQADV 8EW6 ASN W 122 UNP P01732 EXPRESSION TAG SEQADV 8EW6 SER W 123 UNP P01732 EXPRESSION TAG SEQADV 8EW6 HIS W 124 UNP P01732 EXPRESSION TAG SEQADV 8EW6 HIS W 125 UNP P01732 EXPRESSION TAG SEQADV 8EW6 HIS W 126 UNP P01732 EXPRESSION TAG SEQADV 8EW6 HIS W 127 UNP P01732 EXPRESSION TAG SEQADV 8EW6 HIS W 128 UNP P01732 EXPRESSION TAG SEQADV 8EW6 HIS W 129 UNP P01732 EXPRESSION TAG SEQRES 1 W 129 SER GLN PHE ARG VAL SER PRO LEU ASP ARG THR TRP ASN SEQRES 2 W 129 LEU GLY GLU THR VAL GLU LEU LYS CYS GLN VAL LEU LEU SEQRES 3 W 129 SER ASN PRO THR SER GLY CYS SER TRP LEU PHE GLN PRO SEQRES 4 W 129 ARG GLY ALA ALA ALA SER PRO THR PHE LEU LEU TYR LEU SEQRES 5 W 129 SER GLN ASN LYS PRO LYS ALA ALA GLU GLY LEU ASP THR SEQRES 6 W 129 GLN ARG PHE SER GLY LYS ARG LEU GLY ASP THR PHE VAL SEQRES 7 W 129 LEU THR LEU SER ASP PHE ARG ARG GLU ASN GLU GLY TYR SEQRES 8 W 129 TYR PHE CYS SER ALA LEU SER ASN SER ILE MET TYR PHE SEQRES 9 W 129 SER HIS PHE VAL PRO VAL PHE LEU PRO ALA LYS PRO THR SEQRES 10 W 129 THR THR PRO GLY ASN SER HIS HIS HIS HIS HIS HIS SEQRES 1 V 137 ALA PRO HIS HIS HIS HIS HIS HIS ASP ASP ASP ASP LYS SEQRES 2 V 137 GLU VAL GLN LEU VAL GLU SER GLY GLY GLY LEU VAL GLN SEQRES 3 V 137 ALA GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 4 V 137 PHE THR PHE ASP ASP TYR ALA ILE GLY TRP PHE ARG GLN SEQRES 5 V 137 ALA PRO GLY LYS GLY ARG GLU GLY VAL LEU CYS ILE ARG SEQRES 6 V 137 ILE PHE ASP ARG HIS THR TYR SER ALA ASP SER VAL LYS SEQRES 7 V 137 GLY ARG PHE THR ILE SER SER ASP ASN ALA GLN ASN THR SEQRES 8 V 137 VAL TYR LEU HIS MET ASN SER LEU LYS PRO GLU ASP THR SEQRES 9 V 137 ALA VAL TYR TYR CYS ALA ALA GLY SER PHE TRP ALA CYS SEQRES 10 V 137 THR ARG PRO GLU GLY ALA MET ASP TYR TRP GLY LYS GLY SEQRES 11 V 137 THR GLN VAL THR VAL SER SER FORMUL 3 HOH *81(H2 O) HELIX 1 AA1 ARG W 85 ASN W 88 5 4 HELIX 2 AA2 THR V 28 ASP V 31 5 4 HELIX 3 AA3 ASP V 62 LYS V 65 5 4 HELIX 4 AA4 LYS V 87 THR V 91 5 5 HELIX 5 AA5 SER V 100 THR V 105 1 6 SHEET 1 AA1 4 PHE W 3 SER W 6 0 SHEET 2 AA1 4 VAL W 18 VAL W 24 -1 O GLN W 23 N ARG W 4 SHEET 3 AA1 4 THR W 76 LEU W 81 -1 O LEU W 81 N VAL W 18 SHEET 4 AA1 4 PHE W 68 LEU W 73 -1 N LYS W 71 O VAL W 78 SHEET 1 AA2 4 THR W 47 LEU W 52 0 SHEET 2 AA2 4 CYS W 33 PRO W 39 -1 N CYS W 33 O LEU W 52 SHEET 3 AA2 4 GLY W 90 SER W 98 -1 O TYR W 91 N GLN W 38 SHEET 4 AA2 4 ILE W 101 PHE W 104 -1 O TYR W 103 N ALA W 96 SHEET 1 AA3 4 THR W 47 LEU W 52 0 SHEET 2 AA3 4 CYS W 33 PRO W 39 -1 N CYS W 33 O LEU W 52 SHEET 3 AA3 4 GLY W 90 SER W 98 -1 O TYR W 91 N GLN W 38 SHEET 4 AA3 4 VAL W 108 VAL W 110 -1 O VAL W 110 N GLY W 90 SHEET 1 AA4 4 GLN V 3 SER V 7 0 SHEET 2 AA4 4 LEU V 18 SER V 25 -1 O SER V 25 N GLN V 3 SHEET 3 AA4 4 THR V 78 MET V 83 -1 O MET V 83 N LEU V 18 SHEET 4 AA4 4 PHE V 68 ASP V 73 -1 N ASP V 73 O THR V 78 SHEET 1 AA5 6 LEU V 11 GLN V 13 0 SHEET 2 AA5 6 THR V 118 SER V 123 1 O THR V 121 N VAL V 12 SHEET 3 AA5 6 ALA V 92 GLY V 99 -1 N TYR V 94 O THR V 118 SHEET 4 AA5 6 ALA V 33 GLN V 39 -1 N ALA V 33 O GLY V 99 SHEET 5 AA5 6 GLU V 46 ARG V 52 -1 O LEU V 49 N TRP V 36 SHEET 6 AA5 6 HIS V 57 SER V 60 -1 O HIS V 57 N ARG V 52 SHEET 1 AA6 4 LEU V 11 GLN V 13 0 SHEET 2 AA6 4 THR V 118 SER V 123 1 O THR V 121 N VAL V 12 SHEET 3 AA6 4 ALA V 92 GLY V 99 -1 N TYR V 94 O THR V 118 SHEET 4 AA6 4 TYR V 113 TRP V 114 -1 O TYR V 113 N ALA V 98 SSBOND 1 CYS V 22 CYS V 96 1555 1555 2.04 SSBOND 2 CYS V 50 CYS V 104 1555 1555 2.03 CISPEP 1 SER W 6 PRO W 7 0 -3.03 CRYST1 57.115 83.554 51.302 90.00 98.48 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017509 0.000000 0.002610 0.00000 SCALE2 0.000000 0.011968 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019708 0.00000