HEADER LIGASE 21-OCT-22 8EWA TITLE CRYSTAL STRUCTURE OF UDP-N-ACETYLMURAMATE-L-ALANINE LIGASE (UDP-N- TITLE 2 ACETYLMURAMOYL-L-ALANINE SYNTHETASE, MURC) PSEUDOMONAS AERUGINOSA IN TITLE 3 COMPLEX WITH LIGAND AZ-13644923 COMPND MOL_ID: 1; COMPND 2 MOLECULE: UDP-N-ACETYLMURAMATE--L-ALANINE LIGASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: UDP-N-ACETYLMURAMOYL-L-ALANINE SYNTHETASE; COMPND 5 EC: 6.3.2.8; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 287; SOURCE 4 STRAIN: ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 SOURCE 5 / 1C / PRS 101 / PAO1; SOURCE 6 GENE: MURC, PA4411; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PSAEA.00137.B.B5 KEYWDS SSGCID, MURC, CELL WALL BIOGENESIS, PEPTIDOGLYCAN BIOSYNTHESIS, KEYWDS 2 STRUCTURAL GENOMICS, SEATTLE STRUCTURAL GENOMICS CENTER FOR KEYWDS 3 INFECTIOUS DISEASE, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 2 18-OCT-23 8EWA 1 REMARK REVDAT 1 09-NOV-22 8EWA 0 JRNL AUTH J.ABENDROTH,P.HILL,P.S.HORANYI,D.D.LORIMER,T.E.EDWARDS JRNL TITL CRYSTAL STRUCTURE OF UDP-N-ACETYLMURAMATE-L-ALANINE LIGASE JRNL TITL 2 (UDP-N-ACETYLMURAMOYL-L-ALANINE SYNTHETASE, MURC) JRNL TITL 3 PSEUDOMONAS AERUGINOSA IN COMPLEX WITH LIGAND AZ-13644923 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1 4742 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.24 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 52453 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.167 REMARK 3 FREE R VALUE : 0.215 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.880 REMARK 3 FREE R VALUE TEST SET COUNT : 2037 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.2400 - 4.5600 1.00 3582 138 0.1591 0.2157 REMARK 3 2 4.5600 - 3.6200 1.00 3444 125 0.1390 0.1521 REMARK 3 3 3.6200 - 3.1600 1.00 3429 104 0.1533 0.2022 REMARK 3 4 3.1600 - 2.8700 1.00 3388 124 0.1687 0.2024 REMARK 3 5 2.8700 - 2.6700 1.00 3361 142 0.1742 0.2202 REMARK 3 6 2.6700 - 2.5100 1.00 3349 144 0.1846 0.2141 REMARK 3 7 2.5100 - 2.3900 1.00 3322 137 0.1754 0.2815 REMARK 3 8 2.3900 - 2.2800 1.00 3318 147 0.1727 0.2597 REMARK 3 9 2.2800 - 2.1900 1.00 3354 127 0.1744 0.2138 REMARK 3 10 2.1900 - 2.1200 1.00 3299 161 0.1916 0.2324 REMARK 3 11 2.1200 - 2.0500 1.00 3341 116 0.1790 0.2359 REMARK 3 12 2.0500 - 1.9900 1.00 3305 150 0.1744 0.2491 REMARK 3 13 1.9900 - 1.9400 1.00 3313 130 0.1841 0.2084 REMARK 3 14 1.9400 - 1.8900 1.00 3307 148 0.2130 0.2687 REMARK 3 15 1.8900 - 1.8500 1.00 3304 144 0.2666 0.3237 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.213 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.682 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 32.16 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.73 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 4752 REMARK 3 ANGLE : 0.957 6494 REMARK 3 CHIRALITY : 0.065 758 REMARK 3 PLANARITY : 0.008 852 REMARK 3 DIHEDRAL : 14.478 1724 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 115 THROUGH 264 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.0532 4.0962 31.0866 REMARK 3 T TENSOR REMARK 3 T11: 0.1453 T22: 0.1435 REMARK 3 T33: 0.1313 T12: -0.0274 REMARK 3 T13: -0.0315 T23: -0.0350 REMARK 3 L TENSOR REMARK 3 L11: 1.8969 L22: 2.6344 REMARK 3 L33: 2.1219 L12: 0.0013 REMARK 3 L13: -0.0679 L23: -0.6158 REMARK 3 S TENSOR REMARK 3 S11: 0.0184 S12: 0.0502 S13: -0.0830 REMARK 3 S21: -0.2151 S22: 0.0570 S23: 0.0299 REMARK 3 S31: 0.1561 S32: 0.0291 S33: -0.0437 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 265 THROUGH 322 ) REMARK 3 ORIGIN FOR THE GROUP (A): -33.8461 12.2992 38.8701 REMARK 3 T TENSOR REMARK 3 T11: 0.1518 T22: 0.1391 REMARK 3 T33: 0.1770 T12: 0.0002 REMARK 3 T13: -0.0113 T23: -0.0030 REMARK 3 L TENSOR REMARK 3 L11: 4.0920 L22: 4.7551 REMARK 3 L33: 3.0804 L12: -0.0062 REMARK 3 L13: -1.1081 L23: 0.0001 REMARK 3 S TENSOR REMARK 3 S11: -0.0897 S12: -0.0824 S13: 0.3175 REMARK 3 S21: -0.0915 S22: 0.1175 S23: 0.4546 REMARK 3 S31: -0.3168 S32: -0.2100 S33: -0.0267 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 13 THROUGH 114 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.2058 -1.9003 48.3386 REMARK 3 T TENSOR REMARK 3 T11: 0.1758 T22: 0.1777 REMARK 3 T33: 0.1411 T12: 0.0588 REMARK 3 T13: -0.0064 T23: -0.0278 REMARK 3 L TENSOR REMARK 3 L11: 4.7178 L22: 2.0046 REMARK 3 L33: 3.6814 L12: 1.7694 REMARK 3 L13: 1.0029 L23: 0.1844 REMARK 3 S TENSOR REMARK 3 S11: 0.0731 S12: -0.0392 S13: 0.0184 REMARK 3 S21: 0.0282 S22: -0.0297 S23: 0.0803 REMARK 3 S31: -0.0399 S32: -0.1375 S33: -0.0476 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 115 THROUGH 322 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.2412 -1.0782 20.5916 REMARK 3 T TENSOR REMARK 3 T11: 0.1192 T22: 0.0954 REMARK 3 T33: 0.1354 T12: -0.0028 REMARK 3 T13: 0.0004 T23: 0.0342 REMARK 3 L TENSOR REMARK 3 L11: 2.6238 L22: 1.6278 REMARK 3 L33: 2.7259 L12: -0.0178 REMARK 3 L13: -0.2890 L23: 0.1106 REMARK 3 S TENSOR REMARK 3 S11: 0.0495 S12: -0.1667 S13: -0.0829 REMARK 3 S21: 0.0356 S22: -0.1013 S23: -0.0028 REMARK 3 S31: 0.0380 S32: 0.0040 S33: 0.0347 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 13 THROUGH 114 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.6485 13.8774 7.3464 REMARK 3 T TENSOR REMARK 3 T11: 0.2035 T22: 0.1313 REMARK 3 T33: 0.1675 T12: -0.0429 REMARK 3 T13: -0.0231 T23: 0.0024 REMARK 3 L TENSOR REMARK 3 L11: 2.9389 L22: 3.9790 REMARK 3 L33: 3.9132 L12: -0.4749 REMARK 3 L13: -1.3115 L23: 0.4087 REMARK 3 S TENSOR REMARK 3 S11: 0.0056 S12: 0.0935 S13: 0.1990 REMARK 3 S21: -0.2621 S22: 0.1075 S23: 0.1162 REMARK 3 S31: -0.3027 S32: 0.1319 S33: -0.0968 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8EWA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-OCT-22. REMARK 100 THE DEPOSITION ID IS D_1000269522. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-OCT-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : DIAMOND [111] REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-300 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 52456 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.314 REMARK 200 R MERGE (I) : 0.07400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.4400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.39 REMARK 200 R MERGE FOR SHELL (I) : 0.63400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.330 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 8EGN, SAME CRYSTAL FORM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MOLECULAR DIMENSIONS MORPHEUS II, REMARK 280 OPTIMIZATION SCREEN AROUND CONDITION A1 AND A10: 100MM TRIS BASE/ REMARK 280 HCL PH 8.6, 11% (W/V) PEG 4000, 18% (V/V) 1,2,4-BUTANETRIOL, REMARK 280 30MM LITHUM SULFATE, 30MM POTASSIUM SULFATE: REMARK 280 PSEAA.00137.B.B5.PW39129 AT 12MG/ML + 1MM BSI111803 / AZ13644923: REMARK 280 TRAY: 325495B11: CRYO: DIRECT: PUCK TUI7-6, PH 5.9, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 287K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 35.63500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 55.11500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.47500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 55.11500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 35.63500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 38.47500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3370 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24230 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -51.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 7 REMARK 465 ALA A 8 REMARK 465 HIS A 9 REMARK 465 HIS A 10 REMARK 465 HIS A 11 REMARK 465 HIS A 12 REMARK 465 ASP A 194 REMARK 465 HIS A 195 REMARK 465 MET A 196 REMARK 465 ALA A 197 REMARK 465 THR A 198 REMARK 465 TYR A 199 REMARK 465 GLY A 200 REMARK 465 GLY A 201 REMARK 465 MET B 7 REMARK 465 ALA B 8 REMARK 465 HIS B 9 REMARK 465 HIS B 10 REMARK 465 HIS B 11 REMARK 465 HIS B 12 REMARK 465 HIS B 195 REMARK 465 MET B 196 REMARK 465 ALA B 197 REMARK 465 THR B 198 REMARK 465 TYR B 199 REMARK 465 GLY B 200 REMARK 465 GLY B 201 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 16 CG CD NE CZ NH1 NH2 REMARK 470 ASN A 158 CG OD1 ND2 REMARK 470 ARG A 165 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 202 CG OD1 OD2 REMARK 470 PHE A 203 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ASN A 204 CG OD1 ND2 REMARK 470 LYS A 205 CG CD CE NZ REMARK 470 LYS A 208 CG CD CE NZ REMARK 470 GLU A 308 CG CD OE1 OE2 REMARK 470 ARG B 16 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 58 CG CD CE NZ REMARK 470 ASP B 194 CG OD1 OD2 REMARK 470 PHE B 203 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS B 205 CG CD CE NZ REMARK 470 LYS B 208 CG CD CE NZ REMARK 470 GLN B 318 CG CD OE1 NE2 REMARK 470 ARG B 322 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 110 O HOH A 501 2.09 REMARK 500 OE2 GLU A 173 O HOH A 502 2.17 REMARK 500 OE1 GLU A 106 O HOH A 503 2.18 REMARK 500 NE2 HIS B 180 O HOH B 501 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 26 -142.74 44.44 REMARK 500 SER A 82 -75.92 -154.39 REMARK 500 ASN A 158 72.12 -113.66 REMARK 500 ASN A 190 157.98 179.19 REMARK 500 ALA A 240 49.90 -91.34 REMARK 500 ASN A 283 50.88 -100.65 REMARK 500 SER B 82 -85.92 -153.24 REMARK 500 ALA B 193 31.49 -80.12 REMARK 500 ALA B 240 51.08 -92.01 REMARK 500 ASN B 283 56.20 -92.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 736 DISTANCE = 5.95 ANGSTROMS REMARK 525 HOH A 737 DISTANCE = 6.09 ANGSTROMS REMARK 525 HOH B 740 DISTANCE = 6.79 ANGSTROMS DBREF 8EWA A 16 322 UNP Q9HW02 MURC_PSEAE 16 322 DBREF 8EWA B 16 322 UNP Q9HW02 MURC_PSEAE 16 322 SEQADV 8EWA MET A 7 UNP Q9HW02 INITIATING METHIONINE SEQADV 8EWA ALA A 8 UNP Q9HW02 EXPRESSION TAG SEQADV 8EWA HIS A 9 UNP Q9HW02 EXPRESSION TAG SEQADV 8EWA HIS A 10 UNP Q9HW02 EXPRESSION TAG SEQADV 8EWA HIS A 11 UNP Q9HW02 EXPRESSION TAG SEQADV 8EWA HIS A 12 UNP Q9HW02 EXPRESSION TAG SEQADV 8EWA HIS A 13 UNP Q9HW02 EXPRESSION TAG SEQADV 8EWA HIS A 14 UNP Q9HW02 EXPRESSION TAG SEQADV 8EWA MET A 15 UNP Q9HW02 EXPRESSION TAG SEQADV 8EWA MET B 7 UNP Q9HW02 INITIATING METHIONINE SEQADV 8EWA ALA B 8 UNP Q9HW02 EXPRESSION TAG SEQADV 8EWA HIS B 9 UNP Q9HW02 EXPRESSION TAG SEQADV 8EWA HIS B 10 UNP Q9HW02 EXPRESSION TAG SEQADV 8EWA HIS B 11 UNP Q9HW02 EXPRESSION TAG SEQADV 8EWA HIS B 12 UNP Q9HW02 EXPRESSION TAG SEQADV 8EWA HIS B 13 UNP Q9HW02 EXPRESSION TAG SEQADV 8EWA HIS B 14 UNP Q9HW02 EXPRESSION TAG SEQADV 8EWA MET B 15 UNP Q9HW02 EXPRESSION TAG SEQRES 1 A 316 MET ALA HIS HIS HIS HIS HIS HIS MET ARG ARG ILE HIS SEQRES 2 A 316 PHE VAL GLY ILE GLY GLY ALA GLY MET CYS GLY ILE ALA SEQRES 3 A 316 GLU VAL LEU LEU ASN LEU GLY TYR GLU VAL SER GLY SER SEQRES 4 A 316 ASP LEU LYS ALA SER ALA VAL THR GLU ARG LEU GLU LYS SEQRES 5 A 316 PHE GLY ALA GLN ILE PHE ILE GLY HIS GLN ALA GLU ASN SEQRES 6 A 316 ALA ASP GLY ALA ASP VAL LEU VAL VAL SER SER ALA ILE SEQRES 7 A 316 ASN ARG ALA ASN PRO GLU VAL ALA SER ALA LEU GLU ARG SEQRES 8 A 316 ARG ILE PRO VAL VAL PRO ARG ALA GLU MET LEU ALA GLU SEQRES 9 A 316 LEU MET ARG TYR ARG HIS GLY ILE ALA VAL ALA GLY THR SEQRES 10 A 316 HIS GLY LYS THR THR THR THR SER LEU ILE ALA SER VAL SEQRES 11 A 316 PHE ALA ALA GLY GLY LEU ASP PRO THR PHE VAL ILE GLY SEQRES 12 A 316 GLY ARG LEU ASN ALA ALA GLY THR ASN ALA GLN LEU GLY SEQRES 13 A 316 ALA SER ARG TYR LEU VAL ALA GLU ALA ASP GLU SER ASP SEQRES 14 A 316 ALA SER PHE LEU HIS LEU GLN PRO MET VAL ALA VAL VAL SEQRES 15 A 316 THR ASN ILE ASP ALA ASP HIS MET ALA THR TYR GLY GLY SEQRES 16 A 316 ASP PHE ASN LYS LEU LYS LYS THR PHE VAL GLU PHE LEU SEQRES 17 A 316 HIS ASN LEU PRO PHE TYR GLY LEU ALA VAL MET CYS VAL SEQRES 18 A 316 ASP ASP PRO VAL VAL ARG GLU ILE LEU PRO GLN ILE ALA SEQRES 19 A 316 ARG PRO THR VAL THR TYR GLY LEU SER GLU ASP ALA ASP SEQRES 20 A 316 VAL ARG ALA ILE ASN ILE ARG GLN GLU GLY MET ARG THR SEQRES 21 A 316 TRP PHE THR VAL LEU ARG PRO GLU ARG GLU PRO LEU ASP SEQRES 22 A 316 VAL SER VAL ASN MET PRO GLY LEU HIS ASN VAL LEU ASN SEQRES 23 A 316 SER LEU ALA THR ILE VAL ILE ALA THR ASP GLU GLY ILE SEQRES 24 A 316 SER ASP GLU ALA ILE VAL GLN GLY LEU SER GLY PHE GLN SEQRES 25 A 316 GLY VAL GLY ARG SEQRES 1 B 316 MET ALA HIS HIS HIS HIS HIS HIS MET ARG ARG ILE HIS SEQRES 2 B 316 PHE VAL GLY ILE GLY GLY ALA GLY MET CYS GLY ILE ALA SEQRES 3 B 316 GLU VAL LEU LEU ASN LEU GLY TYR GLU VAL SER GLY SER SEQRES 4 B 316 ASP LEU LYS ALA SER ALA VAL THR GLU ARG LEU GLU LYS SEQRES 5 B 316 PHE GLY ALA GLN ILE PHE ILE GLY HIS GLN ALA GLU ASN SEQRES 6 B 316 ALA ASP GLY ALA ASP VAL LEU VAL VAL SER SER ALA ILE SEQRES 7 B 316 ASN ARG ALA ASN PRO GLU VAL ALA SER ALA LEU GLU ARG SEQRES 8 B 316 ARG ILE PRO VAL VAL PRO ARG ALA GLU MET LEU ALA GLU SEQRES 9 B 316 LEU MET ARG TYR ARG HIS GLY ILE ALA VAL ALA GLY THR SEQRES 10 B 316 HIS GLY LYS THR THR THR THR SER LEU ILE ALA SER VAL SEQRES 11 B 316 PHE ALA ALA GLY GLY LEU ASP PRO THR PHE VAL ILE GLY SEQRES 12 B 316 GLY ARG LEU ASN ALA ALA GLY THR ASN ALA GLN LEU GLY SEQRES 13 B 316 ALA SER ARG TYR LEU VAL ALA GLU ALA ASP GLU SER ASP SEQRES 14 B 316 ALA SER PHE LEU HIS LEU GLN PRO MET VAL ALA VAL VAL SEQRES 15 B 316 THR ASN ILE ASP ALA ASP HIS MET ALA THR TYR GLY GLY SEQRES 16 B 316 ASP PHE ASN LYS LEU LYS LYS THR PHE VAL GLU PHE LEU SEQRES 17 B 316 HIS ASN LEU PRO PHE TYR GLY LEU ALA VAL MET CYS VAL SEQRES 18 B 316 ASP ASP PRO VAL VAL ARG GLU ILE LEU PRO GLN ILE ALA SEQRES 19 B 316 ARG PRO THR VAL THR TYR GLY LEU SER GLU ASP ALA ASP SEQRES 20 B 316 VAL ARG ALA ILE ASN ILE ARG GLN GLU GLY MET ARG THR SEQRES 21 B 316 TRP PHE THR VAL LEU ARG PRO GLU ARG GLU PRO LEU ASP SEQRES 22 B 316 VAL SER VAL ASN MET PRO GLY LEU HIS ASN VAL LEU ASN SEQRES 23 B 316 SER LEU ALA THR ILE VAL ILE ALA THR ASP GLU GLY ILE SEQRES 24 B 316 SER ASP GLU ALA ILE VAL GLN GLY LEU SER GLY PHE GLN SEQRES 25 B 316 GLY VAL GLY ARG HET WYI A 400 40 HET SO4 A 401 5 HET WYI B 401 40 HET SO4 B 402 5 HET CL B 403 1 HETNAM WYI (2R)-2-({4-[(5-TERT-BUTYL-1-METHYL-1H-PYRAZOL-3-YL) HETNAM 2 WYI AMINO]-1H-PYRAZOLO[3,4-D]PYRIMIDIN-6-YL}AMINO)-2- HETNAM 3 WYI PHENYLETHYL (2R)-2-(AMINOMETHYL)MORPHOLINE-4- HETNAM 4 WYI CARBOXYLATE HETNAM SO4 SULFATE ION HETNAM CL CHLORIDE ION FORMUL 3 WYI 2(C27 H36 N10 O3) FORMUL 4 SO4 2(O4 S 2-) FORMUL 7 CL CL 1- FORMUL 8 HOH *477(H2 O) HELIX 1 AA1 GLY A 25 LEU A 38 1 14 HELIX 2 AA2 SER A 50 GLY A 60 1 11 HELIX 3 AA3 GLN A 68 ASP A 73 5 6 HELIX 4 AA4 ASN A 88 ARG A 97 1 10 HELIX 5 AA5 ARG A 104 LEU A 111 1 8 HELIX 6 AA6 MET A 112 ARG A 115 5 4 HELIX 7 AA7 GLY A 125 GLY A 140 1 16 HELIX 8 AA8 SER A 177 LEU A 181 5 5 HELIX 9 AA9 PHE A 203 HIS A 215 1 13 HELIX 10 AB1 ASP A 229 LEU A 236 1 8 HELIX 11 AB2 PRO A 237 ILE A 239 5 3 HELIX 12 AB3 GLY A 286 GLU A 303 1 18 HELIX 13 AB4 SER A 306 PHE A 317 1 12 HELIX 14 AB5 GLY B 27 LEU B 38 1 12 HELIX 15 AB6 SER B 50 PHE B 59 1 10 HELIX 16 AB7 GLN B 68 ASP B 73 5 6 HELIX 17 AB8 ASN B 88 ARG B 97 1 10 HELIX 18 AB9 ARG B 104 LEU B 111 1 8 HELIX 19 AC1 MET B 112 ARG B 115 5 4 HELIX 20 AC2 GLY B 125 GLY B 140 1 16 HELIX 21 AC3 SER B 177 LEU B 181 5 5 HELIX 22 AC4 PHE B 203 ASN B 216 1 14 HELIX 23 AC5 ASP B 229 LEU B 236 1 8 HELIX 24 AC6 PRO B 237 ILE B 239 5 3 HELIX 25 AC7 GLY B 286 GLU B 303 1 18 HELIX 26 AC8 SER B 306 GLY B 316 1 11 SHEET 1 AA1 5 GLN A 62 ILE A 65 0 SHEET 2 AA1 5 GLU A 41 ASP A 46 1 N GLY A 44 O PHE A 64 SHEET 3 AA1 5 ARG A 17 VAL A 21 1 N PHE A 20 O SER A 43 SHEET 4 AA1 5 VAL A 77 VAL A 80 1 O VAL A 79 N VAL A 21 SHEET 5 AA1 5 VAL A 101 PRO A 103 1 O VAL A 102 N LEU A 78 SHEET 1 AA210 ARG A 151 ALA A 154 0 SHEET 2 AA210 THR A 145 ILE A 148 -1 N PHE A 146 O ASN A 153 SHEET 3 AA210 TYR A 166 GLU A 170 1 O VAL A 168 N VAL A 147 SHEET 4 AA210 HIS A 116 ALA A 121 1 N VAL A 120 O ALA A 169 SHEET 5 AA210 VAL A 185 VAL A 188 1 O VAL A 185 N ALA A 119 SHEET 6 AA210 LEU A 222 CYS A 226 1 O VAL A 224 N ALA A 186 SHEET 7 AA210 THR A 243 GLY A 247 1 O VAL A 244 N ALA A 223 SHEET 8 AA210 VAL A 254 GLU A 262 1 O VAL A 254 N THR A 245 SHEET 9 AA210 ARG A 265 LEU A 271 -1 O TRP A 267 N ARG A 260 SHEET 10 AA210 LEU A 278 VAL A 282 -1 O VAL A 280 N PHE A 268 SHEET 1 AA3 5 GLN B 62 ILE B 65 0 SHEET 2 AA3 5 GLU B 41 ASP B 46 1 N GLY B 44 O PHE B 64 SHEET 3 AA3 5 ARG B 17 VAL B 21 1 N ILE B 18 O GLU B 41 SHEET 4 AA3 5 VAL B 77 VAL B 80 1 O VAL B 79 N VAL B 21 SHEET 5 AA3 5 VAL B 101 PRO B 103 1 O VAL B 102 N LEU B 78 SHEET 1 AA410 ARG B 151 ALA B 154 0 SHEET 2 AA410 THR B 145 ILE B 148 -1 N PHE B 146 O ASN B 153 SHEET 3 AA410 TYR B 166 GLU B 170 1 O VAL B 168 N THR B 145 SHEET 4 AA410 HIS B 116 ALA B 121 1 N ILE B 118 O LEU B 167 SHEET 5 AA410 VAL B 185 VAL B 188 1 O VAL B 187 N ALA B 121 SHEET 6 AA410 LEU B 222 CYS B 226 1 O VAL B 224 N ALA B 186 SHEET 7 AA410 THR B 243 GLY B 247 1 O VAL B 244 N ALA B 223 SHEET 8 AA410 VAL B 254 GLU B 262 1 O VAL B 254 N THR B 245 SHEET 9 AA410 ARG B 265 LEU B 271 -1 O TRP B 267 N ARG B 260 SHEET 10 AA410 LEU B 278 VAL B 282 -1 O VAL B 280 N PHE B 268 CRYST1 71.270 76.950 110.230 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014031 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012995 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009072 0.00000