HEADER RNA BINDING PROTEIN/RNA 14-NOV-22 8F5G TITLE NUSG-RNA COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: RNA; COMPND 3 CHAIN: D, E, F; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: TRANSCRIPTION TERMINATION/ANTITERMINATION PROTEIN NUSG; COMPND 7 CHAIN: A, B, C; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: BACILLUS VELEZENSIS FZB42; SOURCE 4 ORGANISM_TAXID: 326423; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: THERMOANAEROBACTER PSEUDETHANOLICUS; SOURCE 7 ORGANISM_TAXID: 496866; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 866768 KEYWDS KOW DOMAIN, TRANSCRIPTION, RNA-BINDING PROTEIN, REGULATORY RNA, RNA KEYWDS 2 BINDING PROTEIN-RNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.T.ELGHONDAKLY,A.R.FERRE-D'AMARE REVDAT 3 17-JUL-24 8F5G 1 JRNL REVDAT 2 10-JUL-24 8F5G 1 JRNL REVDAT 1 22-NOV-23 8F5G 0 JRNL AUTH A.ELGHONDAKLY,M.D.JERMAIN,W.C.WINKLER,A.R.FERRE-D'AMARE JRNL TITL MAJOR-GROOVE SEQUENCE-SPECIFIC RNA RECOGNITION BY LOAP, A JRNL TITL 2 PARALOG OF TRANSCRIPTION ELONGATION FACTOR NUSG. JRNL REF STRUCTURE 2024 JRNL REFN ISSN 0969-2126 JRNL PMID 38959899 JRNL DOI 10.1016/J.STR.2024.06.001 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19_4092 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.28 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 23756 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.212 REMARK 3 R VALUE (WORKING SET) : 0.209 REMARK 3 FREE R VALUE : 0.256 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.340 REMARK 3 FREE R VALUE TEST SET COUNT : 1505 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.2800 - 6.0000 1.00 2091 144 0.1899 0.2398 REMARK 3 2 6.0000 - 4.7600 1.00 2044 135 0.1938 0.2156 REMARK 3 3 4.7600 - 4.1600 1.00 2016 135 0.1731 0.1954 REMARK 3 4 4.1600 - 3.7800 1.00 2011 138 0.1934 0.2644 REMARK 3 5 3.7800 - 3.5100 0.99 2000 135 0.2191 0.2834 REMARK 3 6 3.5100 - 3.3000 1.00 1994 137 0.2210 0.2424 REMARK 3 7 3.3000 - 3.1400 1.00 2008 139 0.2403 0.2963 REMARK 3 8 3.1400 - 3.0000 1.00 2072 133 0.2422 0.2682 REMARK 3 9 3.0000 - 2.8900 1.00 1988 136 0.2656 0.3375 REMARK 3 10 2.8900 - 2.7900 1.00 1999 134 0.2789 0.3932 REMARK 3 11 2.7900 - 2.7000 1.00 2028 139 0.2880 0.3443 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.382 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.672 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 56.66 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 58.52 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 5599 REMARK 3 ANGLE : 0.476 7910 REMARK 3 CHIRALITY : 0.039 985 REMARK 3 PLANARITY : 0.003 706 REMARK 3 DIHEDRAL : 12.582 2344 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 2 REMARK 3 NCS GROUP : ens_1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "A" and (resid 0 through 9 or REMARK 3 (resid 10 through 11 and (name N or name REMARK 3 CA or name C or name O or name CB )) or REMARK 3 resid 12 through 25 or (resid 26 through REMARK 3 27 and (name N or name CA or name C or REMARK 3 name O or name CB )) or resid 28 through REMARK 3 40 or (resid 41 and (name N or name CA or REMARK 3 name C or name O or name CB or name CG )) REMARK 3 or (resid 42 through 43 and (name N or REMARK 3 name CA or name C or name O or name CB )) REMARK 3 or resid 44 through 46 or (resid 47 and REMARK 3 (name N or name CA or name C or name O or REMARK 3 name CB )) or resid 48 or (resid 49 and REMARK 3 (name N or name CA or name C or name O or REMARK 3 name CB )) or resid 50 through 85 or REMARK 3 (resid 86 through 87 and (name N or name REMARK 3 CA or name C or name O or name CB )) or REMARK 3 resid 88 through 89 or resid 91 through REMARK 3 94 or (resid 95 and (name N or name CA or REMARK 3 name C or name O or name CB )) or resid REMARK 3 96 or (resid 97 and (name N or name CA or REMARK 3 name C or name O or name CB or name CG or REMARK 3 name CD )) or resid 98 through 100 or REMARK 3 (resid 101 and (name N or name CA or name REMARK 3 C or name O or name CB )) or resid 102 REMARK 3 through 103 or (resid 104 through 107 and REMARK 3 (name N or name CA or name C or name O or REMARK 3 name CB )) or resid 108 through 112 or REMARK 3 (resid 113 and (name N or name CA or name REMARK 3 C or name O or name CB or name CG or name REMARK 3 CD )) or resid 114 through 128 or (resid REMARK 3 129 and (name N or name CA or name C or REMARK 3 name O or name CB )) or resid 130 through REMARK 3 135 or (resid 136 and (name N or name CA REMARK 3 or name C or name O or name CB )) or REMARK 3 resid 137 through 140 or resid 142 REMARK 3 through 145 or (resid 146 and (name N or REMARK 3 name CA or name C or name O or name CB or REMARK 3 name CG or name CD )) or resid 147 REMARK 3 through 165 or (resid 166 and (name N or REMARK 3 name CA or name C or name O or name CB or REMARK 3 name CG )) or resid 167)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "C" and (resid 0 through 2 or REMARK 3 (resid 3 and (name N or name CA or name C REMARK 3 or name O or name CB or name CG )) or REMARK 3 resid 4 through 17 or (resid 18 and (name REMARK 3 N or name CA or name C or name O or name REMARK 3 CB or name CG or name CD or name NE )) or REMARK 3 resid 19 through 21 or (resid 22 and REMARK 3 (name N or name CA or name C or name O or REMARK 3 name CB or name CG )) or resid 23 through REMARK 3 29 or (resid 30 and (name N or name CA or REMARK 3 name C or name O or name CB or name CG or REMARK 3 name CD )) or resid 31 through 34 or REMARK 3 (resid 35 and (name N or name CA or name REMARK 3 C or name O or name CB or name CG or name REMARK 3 CD or name CE )) or resid 36 through 47 REMARK 3 or (resid 48 and (name N or name CA or REMARK 3 name C or name O or name CB or name CG )) REMARK 3 or resid 49 through 62 or (resid 63 and REMARK 3 (name N or name CA or name C or name O or REMARK 3 name CB )) or resid 64 through 69 or REMARK 3 (resid 70 and (name N or name CA or name REMARK 3 C or name O or name CB )) or (resid 71 REMARK 3 and (name N or name CA or name C or name REMARK 3 O or name CB or name CG or name CD or REMARK 3 name CE )) or resid 72 through 73 or REMARK 3 (resid 74 and (name N or name CA or name REMARK 3 C or name O or name CB )) or resid 75 REMARK 3 through 76 or (resid 77 through 78 and REMARK 3 (name N or name CA or name C or name O or REMARK 3 name CB )) or resid 79 or (resid 80 and REMARK 3 (name N or name CA or name C or name O or REMARK 3 name CB or name CG1 or name CG2)) or REMARK 3 (resid 81 and (name N or name CA or name REMARK 3 C or name O or name CB )) or resid 82 or REMARK 3 (resid 83 and (name N or name CA or name REMARK 3 C or name O or name CB or name CG or name REMARK 3 CD )) or (resid 84 and (name N or name CA REMARK 3 or name C or name O or name CB )) or REMARK 3 resid 85 through 89 or resid 91 through REMARK 3 105 or (resid 106 through 107 and (name N REMARK 3 or name CA or name C or name O or name CB REMARK 3 )) or resid 108 through 116 or (resid 117 REMARK 3 and (name N or name CA or name C or name REMARK 3 O or name CB or name CG or name CD )) or REMARK 3 resid 118 or (resid 119 and (name N or REMARK 3 name CA or name C or name O or name CB )) REMARK 3 or resid 120 through 121 or (resid 122 REMARK 3 and (name N or name CA or name C or name REMARK 3 O or name CB )) or resid 123 through 140 REMARK 3 or resid 142 through 167)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : ens_2 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : chain "D" REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : chain "E" REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 3 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : chain "F" REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8F5G COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-NOV-22. REMARK 100 THE DEPOSITION ID IS D_1000270036. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-APR-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.977 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23756 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 48.280 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 12.50 REMARK 200 R MERGE (I) : 0.04819 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.79 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.27250 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: AUTOSOL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.03 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.46 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.25 M SODIUM ACETATE, PH 5.2, 12% W/V REMARK 280 PEG3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 294.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 34.47550 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 43.72550 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 34.47550 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 43.72550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: F, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A -2 REMARK 465 VAL A 168 REMARK 465 SER A 169 REMARK 465 GLU A 170 REMARK 465 GLN A 171 REMARK 465 GLN A 172 REMARK 465 ARG A 173 REMARK 465 SER A 174 REMARK 465 LEU A 175 REMARK 465 VAL A 176 REMARK 465 TYR A 177 REMARK 465 ALA A 178 REMARK 465 CYS A 179 REMARK 465 ALA B -2 REMARK 465 GLY B -1 REMARK 465 THR B 0 REMARK 465 MSE B 1 REMARK 465 LYS B 2 REMARK 465 LYS B 3 REMARK 465 ASN B 23 REMARK 465 LYS B 71 REMARK 465 ILE B 72 REMARK 465 SER B 73 REMARK 465 GLU B 74 REMARK 465 VAL B 75 REMARK 465 LEU B 76 REMARK 465 LYS B 77 REMARK 465 ARG B 78 REMARK 465 GLY B 79 REMARK 465 ILE B 80 REMARK 465 PHE B 81 REMARK 465 LEU B 82 REMARK 465 LYS B 83 REMARK 465 GLU B 84 REMARK 465 GLY B 85 REMARK 465 LYS B 86 REMARK 465 ARG B 87 REMARK 465 GLU B 166 REMARK 465 ASN B 167 REMARK 465 VAL B 168 REMARK 465 SER B 169 REMARK 465 GLU B 170 REMARK 465 GLN B 171 REMARK 465 GLN B 172 REMARK 465 ARG B 173 REMARK 465 SER B 174 REMARK 465 LEU B 175 REMARK 465 VAL B 176 REMARK 465 TYR B 177 REMARK 465 ALA B 178 REMARK 465 CYS B 179 REMARK 465 ALA C -2 REMARK 465 GLY C -1 REMARK 465 LEU C 175 REMARK 465 VAL C 176 REMARK 465 TYR C 177 REMARK 465 ALA C 178 REMARK 465 CYS C 179 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 0 OG1 CG2 REMARK 470 LYS A 3 CD CE NZ REMARK 470 SER A 11 OG REMARK 470 ARG A 18 CZ NH1 NH2 REMARK 470 GLU A 22 CD OE1 OE2 REMARK 470 LYS A 30 CE NZ REMARK 470 LYS A 35 NZ REMARK 470 LYS A 43 CG CD CE NZ REMARK 470 GLU A 48 CD OE1 OE2 REMARK 470 GLU A 63 CG CD OE1 OE2 REMARK 470 TYR A 70 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS A 71 NZ REMARK 470 GLU A 74 CG CD OE1 OE2 REMARK 470 LYS A 77 CG CD CE NZ REMARK 470 ARG A 78 CG CD NE CZ NH1 NH2 REMARK 470 ILE A 80 CD1 REMARK 470 PHE A 81 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 83 CE NZ REMARK 470 GLU A 84 CG CD OE1 OE2 REMARK 470 LYS A 104 CD CE NZ REMARK 470 SER A 106 OG REMARK 470 GLU A 117 OE1 OE2 REMARK 470 GLU A 119 CG CD OE1 OE2 REMARK 470 LYS A 122 CG CD CE NZ REMARK 470 LYS A 129 CE NZ REMARK 470 LYS A 136 NZ REMARK 470 ARG B 10 CG CD NE CZ NH1 NH2 REMARK 470 SER B 11 OG REMARK 470 TYR B 13 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU B 14 CG CD OE1 OE2 REMARK 470 ASN B 15 CG OD1 ND2 REMARK 470 LYS B 16 CG CD CE NZ REMARK 470 VAL B 17 CG1 CG2 REMARK 470 ARG B 18 NH1 NH2 REMARK 470 ASP B 19 CG OD1 OD2 REMARK 470 ILE B 21 CG1 CG2 CD1 REMARK 470 GLU B 22 CG CD OE1 OE2 REMARK 470 CYS B 24 SG REMARK 470 PHE B 25 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU B 27 CG CD OE1 OE2 REMARK 470 GLU B 28 CG CD OE1 OE2 REMARK 470 VAL B 29 CG1 CG2 REMARK 470 LYS B 30 CG CD CE NZ REMARK 470 LEU B 31 CG CD1 CD2 REMARK 470 LYS B 35 CG CD CE NZ REMARK 470 LYS B 37 CG CD CE NZ REMARK 470 ARG B 41 NE CZ NH1 NH2 REMARK 470 LYS B 49 CG CD CE NZ REMARK 470 GLU B 63 CG CD OE1 OE2 REMARK 470 SER B 65 OG REMARK 470 ASP B 66 CG OD1 OD2 REMARK 470 ASP B 67 CG OD1 OD2 REMARK 470 LEU B 68 CG CD1 CD2 REMARK 470 TYR B 69 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 TYR B 70 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS B 104 CG CD CE NZ REMARK 470 ASN B 105 CG OD1 ND2 REMARK 470 SER B 106 OG REMARK 470 ASP B 107 CG OD1 OD2 REMARK 470 ILE B 115 CG1 CG2 CD1 REMARK 470 GLU B 119 CG CD OE1 OE2 REMARK 470 LYS B 122 CG CD CE NZ REMARK 470 GLU B 125 CD OE1 OE2 REMARK 470 THR C 0 OG1 CG2 REMARK 470 LYS C 3 CE NZ REMARK 470 ARG C 10 CG CD NE CZ NH1 NH2 REMARK 470 SER C 11 OG REMARK 470 LYS C 26 CG CD CE NZ REMARK 470 GLU C 27 CG CD OE1 OE2 REMARK 470 ARG C 41 CD NE CZ NH1 NH2 REMARK 470 VAL C 42 CG1 CG2 REMARK 470 LYS C 43 CG CD CE NZ REMARK 470 VAL C 47 CG1 CG2 REMARK 470 LYS C 49 CG CD CE NZ REMARK 470 LYS C 77 CD CE NZ REMARK 470 ARG C 78 NE CZ NH1 NH2 REMARK 470 LYS C 86 CG CD CE NZ REMARK 470 ARG C 87 CG CD NE CZ NH1 NH2 REMARK 470 PHE C 90 CD1 CD2 CE1 CE2 CZ REMARK 470 GLU C 95 CG CD OE1 OE2 REMARK 470 LYS C 97 CE NZ REMARK 470 SER C 101 OG REMARK 470 LYS C 104 CG CD CE NZ REMARK 470 ASN C 105 CG OD1 ND2 REMARK 470 ASP C 107 CG OD1 OD2 REMARK 470 LYS C 113 CE NZ REMARK 470 LYS C 129 CG CD CE NZ REMARK 470 LYS C 136 CG CD CE NZ REMARK 470 LYS C 146 CE NZ REMARK 470 GLU C 166 CD OE1 OE2 REMARK 470 SER C 169 OG REMARK 470 GLN C 172 CG CD OE1 NE2 REMARK 470 SER C 174 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MSE A 64 70.79 57.07 REMARK 500 LYS A 77 -162.43 62.56 REMARK 500 PHE A 81 -7.93 70.30 REMARK 500 LYS B 26 -139.77 61.79 REMARK 500 GLU B 27 -153.59 -84.71 REMARK 500 GLU B 28 -26.06 66.85 REMARK 500 ASP B 66 93.70 -67.71 REMARK 500 LEU B 68 -168.71 56.52 REMARK 500 TYR B 69 150.90 179.15 REMARK 500 THR B 103 43.36 -103.74 REMARK 500 LYS C 77 -70.88 -81.19 REMARK 500 LYS C 86 -14.65 70.52 REMARK 500 LYS C 104 -124.63 34.31 REMARK 500 GLU C 117 78.69 -118.81 REMARK 500 MSE C 165 8.57 58.17 REMARK 500 REMARK 500 REMARK: NULL DBREF 8F5G D 1 26 PDB 8F5G 8F5G 1 26 DBREF 8F5G A -2 179 PDB 8F5G 8F5G -2 179 DBREF 8F5G E 1 26 PDB 8F5G 8F5G 1 26 DBREF 8F5G B -2 179 PDB 8F5G 8F5G -2 179 DBREF 8F5G F 1 26 PDB 8F5G 8F5G 1 26 DBREF 8F5G C -2 179 PDB 8F5G 8F5G -2 179 SEQRES 1 D 26 G G C A A U C G C U G C U SEQRES 2 D 26 U C G G C A C G U U G C C SEQRES 1 A 182 ALA GLY THR MSE LYS LYS TRP TYR VAL ILE PHE THR ARG SEQRES 2 A 182 SER GLY TYR GLU ASN LYS VAL ARG ASP ILE ILE GLU ASN SEQRES 3 A 182 CYS PHE LYS GLU GLU VAL LYS LEU LEU ILE PRO LYS ARG SEQRES 4 A 182 LYS ILE ILE GLU ARG VAL LYS GLY GLN PRO VAL GLU LYS SEQRES 5 A 182 ILE LYS LEU LEU PHE PRO GLY TYR VAL PHE VAL ASN ALA SEQRES 6 A 182 GLU MSE SER ASP ASP LEU TYR TYR LYS ILE SER GLU VAL SEQRES 7 A 182 LEU LYS ARG GLY ILE PHE LEU LYS GLU GLY LYS ARG PRO SEQRES 8 A 182 ALA PHE VAL LYS GLU GLU GLU MSE LYS ILE ILE LEU SER SEQRES 9 A 182 LEU THR LYS ASN SER ASP LEU ILE ASP LEU SER LYS GLY SEQRES 10 A 182 ILE MSE GLU GLY GLU ARG VAL LYS ILE ILE GLU GLY PRO SEQRES 11 A 182 LEU LYS GLY TYR GLU GLY LEU ILE LYS LYS ILE ASP LYS SEQRES 12 A 182 ARG LYS LYS ARG ALA LYS VAL ILE PHE SER ILE ALA GLY SEQRES 13 A 182 GLU LEU LYS SER VAL ASP LEU ALA ILE GLU VAL MSE GLU SEQRES 14 A 182 ASN VAL SER GLU GLN GLN ARG SER LEU VAL TYR ALA CYS SEQRES 1 E 26 G G C A A U C G C U G C U SEQRES 2 E 26 U C G G C A C G U U G C C SEQRES 1 B 182 ALA GLY THR MSE LYS LYS TRP TYR VAL ILE PHE THR ARG SEQRES 2 B 182 SER GLY TYR GLU ASN LYS VAL ARG ASP ILE ILE GLU ASN SEQRES 3 B 182 CYS PHE LYS GLU GLU VAL LYS LEU LEU ILE PRO LYS ARG SEQRES 4 B 182 LYS ILE ILE GLU ARG VAL LYS GLY GLN PRO VAL GLU LYS SEQRES 5 B 182 ILE LYS LEU LEU PHE PRO GLY TYR VAL PHE VAL ASN ALA SEQRES 6 B 182 GLU MSE SER ASP ASP LEU TYR TYR LYS ILE SER GLU VAL SEQRES 7 B 182 LEU LYS ARG GLY ILE PHE LEU LYS GLU GLY LYS ARG PRO SEQRES 8 B 182 ALA PHE VAL LYS GLU GLU GLU MSE LYS ILE ILE LEU SER SEQRES 9 B 182 LEU THR LYS ASN SER ASP LEU ILE ASP LEU SER LYS GLY SEQRES 10 B 182 ILE MSE GLU GLY GLU ARG VAL LYS ILE ILE GLU GLY PRO SEQRES 11 B 182 LEU LYS GLY TYR GLU GLY LEU ILE LYS LYS ILE ASP LYS SEQRES 12 B 182 ARG LYS LYS ARG ALA LYS VAL ILE PHE SER ILE ALA GLY SEQRES 13 B 182 GLU LEU LYS SER VAL ASP LEU ALA ILE GLU VAL MSE GLU SEQRES 14 B 182 ASN VAL SER GLU GLN GLN ARG SER LEU VAL TYR ALA CYS SEQRES 1 F 26 G G C A A U C G C U G C U SEQRES 2 F 26 U C G G C A C G U U G C C SEQRES 1 C 182 ALA GLY THR MSE LYS LYS TRP TYR VAL ILE PHE THR ARG SEQRES 2 C 182 SER GLY TYR GLU ASN LYS VAL ARG ASP ILE ILE GLU ASN SEQRES 3 C 182 CYS PHE LYS GLU GLU VAL LYS LEU LEU ILE PRO LYS ARG SEQRES 4 C 182 LYS ILE ILE GLU ARG VAL LYS GLY GLN PRO VAL GLU LYS SEQRES 5 C 182 ILE LYS LEU LEU PHE PRO GLY TYR VAL PHE VAL ASN ALA SEQRES 6 C 182 GLU MSE SER ASP ASP LEU TYR TYR LYS ILE SER GLU VAL SEQRES 7 C 182 LEU LYS ARG GLY ILE PHE LEU LYS GLU GLY LYS ARG PRO SEQRES 8 C 182 ALA PHE VAL LYS GLU GLU GLU MSE LYS ILE ILE LEU SER SEQRES 9 C 182 LEU THR LYS ASN SER ASP LEU ILE ASP LEU SER LYS GLY SEQRES 10 C 182 ILE MSE GLU GLY GLU ARG VAL LYS ILE ILE GLU GLY PRO SEQRES 11 C 182 LEU LYS GLY TYR GLU GLY LEU ILE LYS LYS ILE ASP LYS SEQRES 12 C 182 ARG LYS LYS ARG ALA LYS VAL ILE PHE SER ILE ALA GLY SEQRES 13 C 182 GLU LEU LYS SER VAL ASP LEU ALA ILE GLU VAL MSE GLU SEQRES 14 C 182 ASN VAL SER GLU GLN GLN ARG SER LEU VAL TYR ALA CYS MODRES 8F5G MSE A 1 MET MODIFIED RESIDUE MODRES 8F5G MSE A 64 MET MODIFIED RESIDUE MODRES 8F5G MSE A 96 MET MODIFIED RESIDUE MODRES 8F5G MSE A 116 MET MODIFIED RESIDUE MODRES 8F5G MSE A 165 MET MODIFIED RESIDUE MODRES 8F5G MSE B 64 MET MODIFIED RESIDUE MODRES 8F5G MSE B 96 MET MODIFIED RESIDUE MODRES 8F5G MSE B 116 MET MODIFIED RESIDUE MODRES 8F5G MSE B 165 MET MODIFIED RESIDUE MODRES 8F5G MSE C 1 MET MODIFIED RESIDUE MODRES 8F5G MSE C 64 MET MODIFIED RESIDUE MODRES 8F5G MSE C 96 MET MODIFIED RESIDUE MODRES 8F5G MSE C 116 MET MODIFIED RESIDUE MODRES 8F5G MSE C 165 MET MODIFIED RESIDUE HET MSE A 1 8 HET MSE A 64 8 HET MSE A 96 8 HET MSE A 116 8 HET MSE A 165 8 HET MSE B 64 8 HET MSE B 96 8 HET MSE B 116 8 HET MSE B 165 8 HET MSE C 1 8 HET MSE C 64 8 HET MSE C 96 8 HET MSE C 116 8 HET MSE C 165 8 HET PEG A 401 7 HETNAM MSE SELENOMETHIONINE HETNAM PEG DI(HYDROXYETHYL)ETHER FORMUL 2 MSE 14(C5 H11 N O2 SE) FORMUL 7 PEG C4 H10 O3 FORMUL 8 HOH *61(H2 O) HELIX 1 AA1 TYR A 13 PHE A 25 1 13 HELIX 2 AA2 SER A 65 LEU A 76 1 12 HELIX 3 AA3 LYS A 92 THR A 103 1 12 HELIX 4 AA4 TYR A 131 GLY A 133 5 3 HELIX 5 AA5 TYR B 13 GLU B 22 1 10 HELIX 6 AA6 LYS B 92 THR B 103 1 12 HELIX 7 AA7 TYR B 131 GLY B 133 5 3 HELIX 8 AA8 TYR C 13 LYS C 26 1 14 HELIX 9 AA9 SER C 65 LEU C 76 1 12 HELIX 10 AB1 LYS C 92 THR C 103 1 12 HELIX 11 AB2 TYR C 131 GLY C 133 5 3 HELIX 12 AB3 SER C 169 SER C 174 5 6 SHEET 1 AA1 4 LYS A 30 LEU A 32 0 SHEET 2 AA1 4 TYR A 57 ALA A 62 -1 O ASN A 61 N LYS A 30 SHEET 3 AA1 4 LYS A 3 PHE A 8 -1 N ILE A 7 O VAL A 58 SHEET 4 AA1 4 ALA A 89 VAL A 91 -1 O VAL A 91 N TRP A 4 SHEET 1 AA2 3 GLN A 45 LEU A 52 0 SHEET 2 AA2 3 LYS A 35 VAL A 42 -1 N GLU A 40 O VAL A 47 SHEET 3 AA2 3 LEU A 108 ILE A 109 1 O ILE A 109 N LYS A 35 SHEET 1 AA3 5 ARG A 120 GLU A 125 0 SHEET 2 AA3 5 SER A 112 GLU A 117 -1 N GLU A 117 O ARG A 120 SHEET 3 AA3 5 GLU A 154 VAL A 164 1 O GLU A 163 N GLY A 114 SHEET 4 AA3 5 ARG A 144 ILE A 151 -1 N PHE A 149 O LYS A 156 SHEET 5 AA3 5 ILE A 135 ASP A 139 -1 N LYS A 137 O LYS A 146 SHEET 1 AA4 4 LYS B 30 LEU B 32 0 SHEET 2 AA4 4 TYR B 57 ASN B 61 -1 O PHE B 59 N LEU B 32 SHEET 3 AA4 4 TYR B 5 PHE B 8 -1 N ILE B 7 O VAL B 58 SHEET 4 AA4 4 ALA B 89 PHE B 90 -1 O ALA B 89 N VAL B 6 SHEET 1 AA5 3 GLN B 45 LEU B 52 0 SHEET 2 AA5 3 LYS B 35 VAL B 42 -1 N ILE B 38 O LYS B 49 SHEET 3 AA5 3 LEU B 108 ILE B 109 1 O ILE B 109 N LYS B 35 SHEET 1 AA6 5 ARG B 120 GLU B 125 0 SHEET 2 AA6 5 SER B 112 GLU B 117 -1 N LYS B 113 O GLU B 125 SHEET 3 AA6 5 GLU B 154 MSE B 165 1 O ALA B 161 N SER B 112 SHEET 4 AA6 5 ARG B 144 ILE B 151 -1 N PHE B 149 O LYS B 156 SHEET 5 AA6 5 ILE B 135 ASP B 139 -1 N LYS B 136 O LYS B 146 SHEET 1 AA7 4 LYS C 30 LEU C 32 0 SHEET 2 AA7 4 TYR C 57 ALA C 62 -1 O ASN C 61 N LYS C 30 SHEET 3 AA7 4 LYS C 3 THR C 9 -1 N TYR C 5 O VAL C 60 SHEET 4 AA7 4 GLY C 79 PHE C 81 -1 O ILE C 80 N PHE C 8 SHEET 1 AA8 4 LYS C 30 LEU C 32 0 SHEET 2 AA8 4 TYR C 57 ALA C 62 -1 O ASN C 61 N LYS C 30 SHEET 3 AA8 4 LYS C 3 THR C 9 -1 N TYR C 5 O VAL C 60 SHEET 4 AA8 4 PHE C 90 VAL C 91 -1 O VAL C 91 N TRP C 4 SHEET 1 AA9 3 GLN C 45 LEU C 52 0 SHEET 2 AA9 3 LYS C 35 VAL C 42 -1 N ILE C 38 O LYS C 49 SHEET 3 AA9 3 LEU C 108 ILE C 109 1 O ILE C 109 N LYS C 35 SHEET 1 AB1 2 LYS C 83 GLU C 84 0 SHEET 2 AB1 2 ARG C 87 PRO C 88 -1 O ARG C 87 N GLU C 84 SHEET 1 AB2 5 ARG C 120 GLU C 125 0 SHEET 2 AB2 5 SER C 112 GLU C 117 -1 N LYS C 113 O GLU C 125 SHEET 3 AB2 5 GLU C 154 GLU C 163 1 O GLU C 163 N GLY C 114 SHEET 4 AB2 5 ARG C 144 ILE C 151 -1 N PHE C 149 O LYS C 156 SHEET 5 AB2 5 ILE C 135 ASP C 139 -1 N LYS C 137 O LYS C 146 LINK C THR A 0 N MSE A 1 1555 1555 1.33 LINK C MSE A 1 N LYS A 2 1555 1555 1.33 LINK C GLU A 63 N MSE A 64 1555 1555 1.33 LINK C MSE A 64 N SER A 65 1555 1555 1.33 LINK C GLU A 95 N MSE A 96 1555 1555 1.33 LINK C MSE A 96 N LYS A 97 1555 1555 1.34 LINK C ILE A 115 N MSE A 116 1555 1555 1.33 LINK C MSE A 116 N GLU A 117 1555 1555 1.33 LINK C VAL A 164 N MSE A 165 1555 1555 1.33 LINK C MSE A 165 N GLU A 166 1555 1555 1.33 LINK C GLU B 63 N MSE B 64 1555 1555 1.33 LINK C MSE B 64 N SER B 65 1555 1555 1.33 LINK C GLU B 95 N MSE B 96 1555 1555 1.33 LINK C MSE B 96 N LYS B 97 1555 1555 1.34 LINK C ILE B 115 N MSE B 116 1555 1555 1.33 LINK C MSE B 116 N GLU B 117 1555 1555 1.33 LINK C VAL B 164 N MSE B 165 1555 1555 1.33 LINK C THR C 0 N MSE C 1 1555 1555 1.33 LINK C MSE C 1 N LYS C 2 1555 1555 1.33 LINK C GLU C 63 N MSE C 64 1555 1555 1.33 LINK C MSE C 64 N SER C 65 1555 1555 1.33 LINK C GLU C 95 N MSE C 96 1555 1555 1.33 LINK C MSE C 96 N LYS C 97 1555 1555 1.34 LINK C ILE C 115 N MSE C 116 1555 1555 1.33 LINK C MSE C 116 N GLU C 117 1555 1555 1.33 LINK C VAL C 164 N MSE C 165 1555 1555 1.33 LINK C MSE C 165 N GLU C 166 1555 1555 1.33 CRYST1 68.951 87.451 148.793 90.00 103.24 90.00 C 1 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014503 0.000000 0.003412 0.00000 SCALE2 0.000000 0.011435 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006904 0.00000 MTRIX1 1 -0.009857 -0.758548 0.651542 -20.88176 1 MTRIX2 1 0.729286 -0.451241 -0.514318 -18.59819 1 MTRIX3 1 0.684138 0.470091 0.557646 -12.07607 1 MTRIX1 2 -0.122533 -0.695467 -0.708034 13.04523 1 MTRIX2 2 -0.687288 -0.455200 0.566064 -72.13054 1 MTRIX3 2 -0.715975 0.555985 -0.422209 86.44652 1 MTRIX1 3 -0.023571 -0.760740 0.648628 -20.40919 1 MTRIX2 3 0.706376 -0.471797 -0.527674 -18.10314 1 MTRIX3 3 0.707444 0.445738 0.548490 -12.13442 1