HEADER DNA BINDING PROTEIN 15-NOV-22 8F5Q TITLE CRYSTAL STRUCTURE OF HUMAN PCNA IN COMPLEX WITH THE PIP BOX OF FBH1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROLIFERATING CELL NUCLEAR ANTIGEN; COMPND 3 CHAIN: A, C, E; COMPND 4 SYNONYM: PCNA,CYCLIN; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: F-BOX DNA HELICASE 1; COMPND 8 CHAIN: B, D, F; COMPND 9 FRAGMENT: PIP BOX (UNP RESIDUES 56-64); COMPND 10 SYNONYM: HFBH1,F-BOX ONLY PROTEIN 18; COMPND 11 EC: 3.6.4.12; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PCNA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606 KEYWDS COMPLEX, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.LIU,B.CHAVES-ARQUERO,P.WEI,H.TENCER,G.ZHANG,F.BLANCO,T.KUTATELADZE REVDAT 1 27-SEP-23 8F5Q 0 JRNL AUTH J.LIU,B.CHAVES-ARQUERO,P.WEI,A.H.TENCER,A.RUIZ-ALBOR, JRNL AUTH 2 G.ZHANG,F.J.BLANCO,T.G.KUTATELADZE JRNL TITL MOLECULAR INSIGHT INTO THE PCNA-BINDING MODE OF FBH1. JRNL REF STRUCTURE V. 31 511 2023 JRNL REFN ISSN 0969-2126 JRNL PMID 36990095 JRNL DOI 10.1016/J.STR.2023.03.004 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18.2_3874 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.79 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 60944 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.225 REMARK 3 R VALUE (WORKING SET) : 0.224 REMARK 3 FREE R VALUE : 0.266 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.280 REMARK 3 FREE R VALUE TEST SET COUNT : 1997 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.7900 - 4.5800 0.93 4092 135 0.2092 0.2206 REMARK 3 2 4.5800 - 3.6300 0.99 4279 158 0.1772 0.2362 REMARK 3 3 3.6300 - 3.1700 0.99 4266 141 0.2001 0.2723 REMARK 3 4 3.1700 - 2.8800 0.99 4253 151 0.2192 0.2685 REMARK 3 5 2.8800 - 2.6800 0.99 4256 147 0.2282 0.2661 REMARK 3 6 2.6800 - 2.5200 0.99 4230 138 0.2213 0.2584 REMARK 3 7 2.5200 - 2.3900 0.99 4227 150 0.2384 0.2500 REMARK 3 8 2.3900 - 2.2900 0.99 4232 125 0.2433 0.3438 REMARK 3 9 2.2900 - 2.2000 0.98 4207 133 0.2639 0.2978 REMARK 3 10 2.2000 - 2.1300 0.99 4238 141 0.2470 0.2644 REMARK 3 11 2.1300 - 2.0600 0.98 4147 140 0.2810 0.3457 REMARK 3 12 2.0600 - 2.0000 0.98 4171 155 0.2914 0.3172 REMARK 3 13 2.0000 - 1.9500 0.98 4205 139 0.3145 0.3409 REMARK 3 14 1.9500 - 1.9000 0.98 4144 144 0.3563 0.3691 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.980 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.013 5860 REMARK 3 ANGLE : 2.260 7903 REMARK 3 CHIRALITY : 0.075 935 REMARK 3 PLANARITY : 0.011 1002 REMARK 3 DIHEDRAL : 14.952 787 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8F5Q COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-NOV-22. REMARK 100 THE DEPOSITION ID IS D_1000269909. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-MAR-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 4.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.28 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CMOS REMARK 200 DETECTOR MANUFACTURER : RDI CMOS_8M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 62010 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 41.790 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 1.900 REMARK 200 R MERGE (I) : 0.04254 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 5IY4 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.29 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES, PH 7.5, 0.2 M MAGNESIUM REMARK 280 CHLORIDE, 30% PEG400, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z+1/2 REMARK 290 4555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 39.67149 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.10500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 59.26467 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 39.67149 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 41.10500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 59.26467 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 93 REMARK 465 ASP A 94 REMARK 465 ASN A 95 REMARK 465 ALA A 96 REMARK 465 PRO A 106 REMARK 465 ASN A 107 REMARK 465 GLN A 108 REMARK 465 GLU A 124 REMARK 465 ALA A 163 REMARK 465 LYS A 164 REMARK 465 ASP A 165 REMARK 465 SER A 186 REMARK 465 ASN A 187 REMARK 465 VAL A 188 REMARK 465 ASP A 189 REMARK 465 LYS A 190 REMARK 465 GLU A 191 REMARK 465 ILE A 255 REMARK 465 GLU A 256 REMARK 465 ASP A 257 REMARK 465 GLU A 258 REMARK 465 GLU A 259 REMARK 465 SER B 56 REMARK 465 GLU C 93 REMARK 465 ASP C 94 REMARK 465 ASN C 95 REMARK 465 ALA C 96 REMARK 465 SER C 186 REMARK 465 ASN C 187 REMARK 465 VAL C 188 REMARK 465 ASP C 189 REMARK 465 LYS C 190 REMARK 465 GLU C 191 REMARK 465 ILE C 255 REMARK 465 GLU C 256 REMARK 465 ASP C 257 REMARK 465 GLU C 258 REMARK 465 GLU C 259 REMARK 465 SER D 56 REMARK 465 GLU E 93 REMARK 465 ASP E 94 REMARK 465 ASN E 95 REMARK 465 VAL E 123 REMARK 465 GLU E 124 REMARK 465 GLN E 125 REMARK 465 THR E 185 REMARK 465 SER E 186 REMARK 465 ASN E 187 REMARK 465 VAL E 188 REMARK 465 ASP E 189 REMARK 465 LYS E 190 REMARK 465 GLU E 191 REMARK 465 GLU E 192 REMARK 465 GLU E 193 REMARK 465 GLU E 256 REMARK 465 ASP E 257 REMARK 465 GLU E 258 REMARK 465 GLU E 259 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 192 CB CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH E 354 O HOH E 359 1.81 REMARK 500 O HOH A 313 O HOH A 341 1.86 REMARK 500 O HOH C 305 O HOH C 316 1.90 REMARK 500 OD1 ASN C 36 O HOH C 301 1.91 REMARK 500 NZ LYS A 254 O HOH A 301 1.91 REMARK 500 OE1 GLU A 3 NH2 ARG A 61 1.97 REMARK 500 O HOH A 303 O HOH A 382 1.98 REMARK 500 O HOH A 313 O HOH A 334 2.02 REMARK 500 O HOH E 367 O HOH E 368 2.04 REMARK 500 O HOH A 301 O HOH B 103 2.04 REMARK 500 O LYS C 254 O HOH C 302 2.05 REMARK 500 O LEU A 118 O HOH A 302 2.06 REMARK 500 O HOH C 348 O HOH C 371 2.09 REMARK 500 O HOH A 317 O HOH A 389 2.11 REMARK 500 O HOH A 377 O HOH A 394 2.11 REMARK 500 NE2 GLN C 38 O HOH C 303 2.13 REMARK 500 OH TYR E 133 O HOH E 301 2.14 REMARK 500 SD MET E 229 O HOH E 369 2.15 REMARK 500 O HOH C 369 O HOH C 370 2.15 REMARK 500 O HOH E 358 O HOH E 365 2.16 REMARK 500 O HOH A 380 O HOH A 388 2.17 REMARK 500 OE2 GLU A 132 O HOH A 303 2.18 REMARK 500 O HOH A 381 O HOH A 389 2.19 REMARK 500 NZ LYS C 240 O HOH C 304 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 CD GLU E 174 OE2 GLU E 174 2555 0.62 REMARK 500 OE2 GLU E 174 OE2 GLU E 174 2555 0.67 REMARK 500 NH2 ARG C 64 OD1 ASP E 29 3454 1.66 REMARK 500 OE1 GLU E 174 OE2 GLU E 174 2555 1.73 REMARK 500 CG GLU E 174 OE2 GLU E 174 2555 1.80 REMARK 500 CD GLU E 174 CD GLU E 174 2555 1.85 REMARK 500 OE1 GLU E 104 ND2 ASN E 107 2655 1.90 REMARK 500 NH2 ARG C 64 OD2 ASP E 29 3454 1.98 REMARK 500 OE1 GLN E 8 OE1 GLN E 8 2655 2.02 REMARK 500 NH2 ARG C 64 CG ASP E 29 3454 2.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 64 CG - CD - NE ANGL. DEV. = 15.8 DEGREES REMARK 500 MET C 119 CG - SD - CE ANGL. DEV. = -13.0 DEGREES REMARK 500 MET C 199 CG - SD - CE ANGL. DEV. = -11.4 DEGREES REMARK 500 GLU E 104 OE1 - CD - OE2 ANGL. DEV. = -46.6 DEGREES REMARK 500 GLU E 104 CG - CD - OE1 ANGL. DEV. = 38.5 DEGREES REMARK 500 GLU E 104 CG - CD - OE2 ANGL. DEV. = -37.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 242 -133.35 51.49 REMARK 500 GLN C 108 140.04 80.21 REMARK 500 ASP C 122 54.43 -143.00 REMARK 500 GLN C 125 131.03 -33.34 REMARK 500 GLU C 201 121.35 -174.35 REMARK 500 ALA C 242 -121.21 41.07 REMARK 500 MET C 244 -10.55 -151.08 REMARK 500 ALA E 242 -123.72 50.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 GLY E 155 -10.06 REMARK 500 ASP E 156 11.18 REMARK 500 ASP E 156 11.05 REMARK 500 REMARK 500 REMARK: NULL DBREF 8F5Q A 1 259 UNP P12004 PCNA_HUMAN 1 259 DBREF 8F5Q B 56 64 UNP Q8NFZ0 FBH1_HUMAN 56 64 DBREF 8F5Q C 1 259 UNP P12004 PCNA_HUMAN 1 259 DBREF 8F5Q D 56 64 UNP Q8NFZ0 FBH1_HUMAN 56 64 DBREF 8F5Q E 1 259 UNP P12004 PCNA_HUMAN 1 259 DBREF 8F5Q F 56 64 UNP Q8NFZ0 FBH1_HUMAN 56 64 SEQRES 1 A 259 MET PHE GLU ALA ARG LEU VAL GLN GLY SER ILE LEU LYS SEQRES 2 A 259 LYS VAL LEU GLU ALA LEU LYS ASP LEU ILE ASN GLU ALA SEQRES 3 A 259 CYS TRP ASP ILE SER SER SER GLY VAL ASN LEU GLN SER SEQRES 4 A 259 MET ASP SER SER HIS VAL SER LEU VAL GLN LEU THR LEU SEQRES 5 A 259 ARG SER GLU GLY PHE ASP THR TYR ARG CYS ASP ARG ASN SEQRES 6 A 259 LEU ALA MET GLY VAL ASN LEU THR SER MET SER LYS ILE SEQRES 7 A 259 LEU LYS CYS ALA GLY ASN GLU ASP ILE ILE THR LEU ARG SEQRES 8 A 259 ALA GLU ASP ASN ALA ASP THR LEU ALA LEU VAL PHE GLU SEQRES 9 A 259 ALA PRO ASN GLN GLU LYS VAL SER ASP TYR GLU MET LYS SEQRES 10 A 259 LEU MET ASP LEU ASP VAL GLU GLN LEU GLY ILE PRO GLU SEQRES 11 A 259 GLN GLU TYR SER CYS VAL VAL LYS MET PRO SER GLY GLU SEQRES 12 A 259 PHE ALA ARG ILE CYS ARG ASP LEU SER HIS ILE GLY ASP SEQRES 13 A 259 ALA VAL VAL ILE SER CYS ALA LYS ASP GLY VAL LYS PHE SEQRES 14 A 259 SER ALA SER GLY GLU LEU GLY ASN GLY ASN ILE LYS LEU SEQRES 15 A 259 SER GLN THR SER ASN VAL ASP LYS GLU GLU GLU ALA VAL SEQRES 16 A 259 THR ILE GLU MET ASN GLU PRO VAL GLN LEU THR PHE ALA SEQRES 17 A 259 LEU ARG TYR LEU ASN PHE PHE THR LYS ALA THR PRO LEU SEQRES 18 A 259 SER SER THR VAL THR LEU SER MET SER ALA ASP VAL PRO SEQRES 19 A 259 LEU VAL VAL GLU TYR LYS ILE ALA ASP MET GLY HIS LEU SEQRES 20 A 259 LYS TYR TYR LEU ALA PRO LYS ILE GLU ASP GLU GLU SEQRES 1 B 9 SER GLN ARG CYS ILE PRO GLU PHE PHE SEQRES 1 C 259 MET PHE GLU ALA ARG LEU VAL GLN GLY SER ILE LEU LYS SEQRES 2 C 259 LYS VAL LEU GLU ALA LEU LYS ASP LEU ILE ASN GLU ALA SEQRES 3 C 259 CYS TRP ASP ILE SER SER SER GLY VAL ASN LEU GLN SER SEQRES 4 C 259 MET ASP SER SER HIS VAL SER LEU VAL GLN LEU THR LEU SEQRES 5 C 259 ARG SER GLU GLY PHE ASP THR TYR ARG CYS ASP ARG ASN SEQRES 6 C 259 LEU ALA MET GLY VAL ASN LEU THR SER MET SER LYS ILE SEQRES 7 C 259 LEU LYS CYS ALA GLY ASN GLU ASP ILE ILE THR LEU ARG SEQRES 8 C 259 ALA GLU ASP ASN ALA ASP THR LEU ALA LEU VAL PHE GLU SEQRES 9 C 259 ALA PRO ASN GLN GLU LYS VAL SER ASP TYR GLU MET LYS SEQRES 10 C 259 LEU MET ASP LEU ASP VAL GLU GLN LEU GLY ILE PRO GLU SEQRES 11 C 259 GLN GLU TYR SER CYS VAL VAL LYS MET PRO SER GLY GLU SEQRES 12 C 259 PHE ALA ARG ILE CYS ARG ASP LEU SER HIS ILE GLY ASP SEQRES 13 C 259 ALA VAL VAL ILE SER CYS ALA LYS ASP GLY VAL LYS PHE SEQRES 14 C 259 SER ALA SER GLY GLU LEU GLY ASN GLY ASN ILE LYS LEU SEQRES 15 C 259 SER GLN THR SER ASN VAL ASP LYS GLU GLU GLU ALA VAL SEQRES 16 C 259 THR ILE GLU MET ASN GLU PRO VAL GLN LEU THR PHE ALA SEQRES 17 C 259 LEU ARG TYR LEU ASN PHE PHE THR LYS ALA THR PRO LEU SEQRES 18 C 259 SER SER THR VAL THR LEU SER MET SER ALA ASP VAL PRO SEQRES 19 C 259 LEU VAL VAL GLU TYR LYS ILE ALA ASP MET GLY HIS LEU SEQRES 20 C 259 LYS TYR TYR LEU ALA PRO LYS ILE GLU ASP GLU GLU SEQRES 1 D 9 SER GLN ARG CYS ILE PRO GLU PHE PHE SEQRES 1 E 259 MET PHE GLU ALA ARG LEU VAL GLN GLY SER ILE LEU LYS SEQRES 2 E 259 LYS VAL LEU GLU ALA LEU LYS ASP LEU ILE ASN GLU ALA SEQRES 3 E 259 CYS TRP ASP ILE SER SER SER GLY VAL ASN LEU GLN SER SEQRES 4 E 259 MET ASP SER SER HIS VAL SER LEU VAL GLN LEU THR LEU SEQRES 5 E 259 ARG SER GLU GLY PHE ASP THR TYR ARG CYS ASP ARG ASN SEQRES 6 E 259 LEU ALA MET GLY VAL ASN LEU THR SER MET SER LYS ILE SEQRES 7 E 259 LEU LYS CYS ALA GLY ASN GLU ASP ILE ILE THR LEU ARG SEQRES 8 E 259 ALA GLU ASP ASN ALA ASP THR LEU ALA LEU VAL PHE GLU SEQRES 9 E 259 ALA PRO ASN GLN GLU LYS VAL SER ASP TYR GLU MET LYS SEQRES 10 E 259 LEU MET ASP LEU ASP VAL GLU GLN LEU GLY ILE PRO GLU SEQRES 11 E 259 GLN GLU TYR SER CYS VAL VAL LYS MET PRO SER GLY GLU SEQRES 12 E 259 PHE ALA ARG ILE CYS ARG ASP LEU SER HIS ILE GLY ASP SEQRES 13 E 259 ALA VAL VAL ILE SER CYS ALA LYS ASP GLY VAL LYS PHE SEQRES 14 E 259 SER ALA SER GLY GLU LEU GLY ASN GLY ASN ILE LYS LEU SEQRES 15 E 259 SER GLN THR SER ASN VAL ASP LYS GLU GLU GLU ALA VAL SEQRES 16 E 259 THR ILE GLU MET ASN GLU PRO VAL GLN LEU THR PHE ALA SEQRES 17 E 259 LEU ARG TYR LEU ASN PHE PHE THR LYS ALA THR PRO LEU SEQRES 18 E 259 SER SER THR VAL THR LEU SER MET SER ALA ASP VAL PRO SEQRES 19 E 259 LEU VAL VAL GLU TYR LYS ILE ALA ASP MET GLY HIS LEU SEQRES 20 E 259 LYS TYR TYR LEU ALA PRO LYS ILE GLU ASP GLU GLU SEQRES 1 F 9 SER GLN ARG CYS ILE PRO GLU PHE PHE FORMUL 7 HOH *253(H2 O) HELIX 1 AA1 GLY A 9 ALA A 18 1 10 HELIX 2 AA2 GLU A 55 PHE A 57 5 3 HELIX 3 AA3 LEU A 72 CYS A 81 1 10 HELIX 4 AA4 SER A 141 SER A 152 1 12 HELIX 5 AA5 LEU A 209 THR A 216 1 8 HELIX 6 AA6 LYS A 217 SER A 222 5 6 HELIX 7 AA7 CYS B 59 PHE B 63 5 5 HELIX 8 AA8 GLY C 9 ALA C 18 1 10 HELIX 9 AA9 GLU C 55 PHE C 57 5 3 HELIX 10 AB1 LEU C 72 LYS C 80 1 9 HELIX 11 AB2 SER C 141 HIS C 153 1 13 HELIX 12 AB3 LEU C 209 THR C 216 1 8 HELIX 13 AB4 LYS C 217 SER C 222 5 6 HELIX 14 AB5 CYS D 59 PHE D 63 5 5 HELIX 15 AB6 GLY E 9 ASP E 21 1 13 HELIX 16 AB7 GLU E 55 PHE E 57 5 3 HELIX 17 AB8 LEU E 72 CYS E 81 1 10 HELIX 18 AB9 SER E 141 HIS E 153 1 13 HELIX 19 AC1 LEU E 209 THR E 216 1 8 HELIX 20 AC2 LYS E 217 SER E 222 5 6 HELIX 21 AC3 CYS F 59 PHE F 63 5 5 SHEET 1 AA1 9 THR A 59 CYS A 62 0 SHEET 2 AA1 9 PHE A 2 LEU A 6 -1 N ARG A 5 O THR A 59 SHEET 3 AA1 9 ILE A 87 ALA A 92 -1 O ILE A 88 N LEU A 6 SHEET 4 AA1 9 THR A 98 GLU A 104 -1 O GLU A 104 N ILE A 87 SHEET 5 AA1 9 LYS A 110 LYS A 117 -1 O TYR A 114 N LEU A 101 SHEET 6 AA1 9 GLY E 176 SER E 183 -1 O LYS E 181 N VAL A 111 SHEET 7 AA1 9 GLY E 166 SER E 172 -1 N PHE E 169 O ILE E 180 SHEET 8 AA1 9 ALA E 157 CYS E 162 -1 N VAL E 159 O SER E 170 SHEET 9 AA1 9 VAL E 203 ALA E 208 -1 O LEU E 205 N ILE E 160 SHEET 1 AA2 9 LEU A 66 ASN A 71 0 SHEET 2 AA2 9 GLU A 25 SER A 31 -1 N ALA A 26 O VAL A 70 SHEET 3 AA2 9 GLY A 34 MET A 40 -1 O ASN A 36 N ASP A 29 SHEET 4 AA2 9 SER A 46 ARG A 53 -1 O LEU A 50 N LEU A 37 SHEET 5 AA2 9 GLY A 245 LEU A 251 -1 O TYR A 250 N LEU A 47 SHEET 6 AA2 9 LEU A 235 ILE A 241 -1 N VAL A 237 O TYR A 249 SHEET 7 AA2 9 THR A 224 MET A 229 -1 N THR A 226 O GLU A 238 SHEET 8 AA2 9 CYS A 135 PRO A 140 -1 N VAL A 137 O LEU A 227 SHEET 9 AA2 9 THR A 196 MET A 199 -1 O THR A 196 N LYS A 138 SHEET 1 AA3 9 GLN A 204 ALA A 208 0 SHEET 2 AA3 9 ALA A 157 SER A 161 -1 N ILE A 160 O LEU A 205 SHEET 3 AA3 9 VAL A 167 SER A 172 -1 O LYS A 168 N SER A 161 SHEET 4 AA3 9 GLY A 176 LEU A 182 -1 O LEU A 182 N VAL A 167 SHEET 5 AA3 9 LYS C 110 LYS C 117 -1 O GLU C 115 N ASN A 177 SHEET 6 AA3 9 THR C 98 GLU C 104 -1 N LEU C 101 O TYR C 114 SHEET 7 AA3 9 ILE C 87 ALA C 92 -1 N ARG C 91 O ALA C 100 SHEET 8 AA3 9 PHE C 2 LEU C 6 -1 N LEU C 6 O ILE C 88 SHEET 9 AA3 9 THR C 59 CYS C 62 -1 O THR C 59 N ARG C 5 SHEET 1 AA4 9 LEU C 66 ASN C 71 0 SHEET 2 AA4 9 GLU C 25 SER C 31 -1 N ALA C 26 O VAL C 70 SHEET 3 AA4 9 GLY C 34 MET C 40 -1 O ASN C 36 N ASP C 29 SHEET 4 AA4 9 SER C 46 ARG C 53 -1 O LEU C 52 N VAL C 35 SHEET 5 AA4 9 GLY C 245 LEU C 251 -1 O TYR C 250 N LEU C 47 SHEET 6 AA4 9 LEU C 235 ILE C 241 -1 N VAL C 237 O TYR C 249 SHEET 7 AA4 9 THR C 224 MET C 229 -1 N THR C 226 O GLU C 238 SHEET 8 AA4 9 CYS C 135 PRO C 140 -1 N MET C 139 O VAL C 225 SHEET 9 AA4 9 THR C 196 MET C 199 -1 O GLU C 198 N VAL C 136 SHEET 1 AA5 9 VAL C 203 ALA C 208 0 SHEET 2 AA5 9 ALA C 157 CYS C 162 -1 N ILE C 160 O LEU C 205 SHEET 3 AA5 9 GLY C 166 SER C 172 -1 O SER C 170 N VAL C 159 SHEET 4 AA5 9 GLY C 176 SER C 183 -1 O LEU C 182 N VAL C 167 SHEET 5 AA5 9 LYS E 110 LYS E 117 -1 O VAL E 111 N LYS C 181 SHEET 6 AA5 9 THR E 98 GLU E 104 -1 N LEU E 101 O TYR E 114 SHEET 7 AA5 9 ILE E 87 ALA E 92 -1 N ARG E 91 O ALA E 100 SHEET 8 AA5 9 PHE E 2 LEU E 6 -1 N LEU E 6 O ILE E 88 SHEET 9 AA5 9 THR E 59 CYS E 62 -1 O THR E 59 N ARG E 5 SHEET 1 AA6 9 LEU E 66 ASN E 71 0 SHEET 2 AA6 9 GLU E 25 SER E 31 -1 N ALA E 26 O VAL E 70 SHEET 3 AA6 9 GLY E 34 MET E 40 -1 O ASN E 36 N ASP E 29 SHEET 4 AA6 9 SER E 46 ARG E 53 -1 O LEU E 50 N LEU E 37 SHEET 5 AA6 9 GLY E 245 LEU E 251 -1 O TYR E 250 N LEU E 47 SHEET 6 AA6 9 LEU E 235 ILE E 241 -1 N VAL E 237 O TYR E 249 SHEET 7 AA6 9 THR E 224 MET E 229 -1 N THR E 226 O GLU E 238 SHEET 8 AA6 9 CYS E 135 PRO E 140 -1 N VAL E 137 O LEU E 227 SHEET 9 AA6 9 THR E 196 MET E 199 -1 O THR E 196 N LYS E 138 SSBOND 1 CYS C 135 CYS C 162 1555 1555 2.23 SSBOND 2 CYS E 135 CYS E 162 1555 1555 2.05 CRYST1 81.950 82.210 118.558 90.00 91.26 90.00 I 1 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012203 0.000000 0.000268 0.00000 SCALE2 0.000000 0.012164 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008437 0.00000