HEADER TRANSFERASE/INHIBITOR 20-NOV-22 8F7O TITLE BRAF KINASE IN COMPLEX WITH TAK580 (TOVORAFENIB) COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE/THREONINE-PROTEIN KINASE B-RAF; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PROTO-ONCOGENE B-RAF,P94,V-RAF MURINE SARCOMA VIRAL ONCOGENE COMPND 5 HOMOLOG B1; COMPND 6 EC: 2.7.11.1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BRAF, BRAF1, RAFB1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693 KEYWDS BRAF, TAK580, TOVORAFENIB, TRANSFERASE, TRANSFERASE-INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR E.TKACIK,K.LI,G.GONZALEZ DEL-PINO,M.J.ECK REVDAT 2 03-MAY-23 8F7O 1 JRNL REVDAT 1 12-APR-23 8F7O 0 JRNL AUTH E.TKACIK,K.LI,G.GONZALEZ-DEL PINO,B.H.HA,J.VINALS,E.PARK, JRNL AUTH 2 T.S.BEYETT,M.J.ECK JRNL TITL STRUCTURE AND RAF FAMILY KINASE ISOFORM SELECTIVITY OF TYPE JRNL TITL 2 II RAF INHIBITORS TOVORAFENIB AND NAPORAFENIB. JRNL REF J.BIOL.CHEM. V. 299 04634 2023 JRNL REFN ESSN 1083-351X JRNL PMID 36963492 JRNL DOI 10.1016/J.JBC.2023.104634 REMARK 2 REMARK 2 RESOLUTION. 3.54 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.54 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 70.79 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.5 REMARK 3 NUMBER OF REFLECTIONS : 7519 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.221 REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.269 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 752 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 70.7900 - 6.0500 0.92 1401 156 0.1859 0.2345 REMARK 3 2 6.0400 - 4.8000 0.95 1353 151 0.2201 0.2939 REMARK 3 3 4.8000 - 4.1900 0.93 1321 147 0.2020 0.2539 REMARK 3 4 4.1900 - 3.8100 0.96 1335 148 0.2407 0.2981 REMARK 3 5 3.8100 - 3.5400 0.97 1357 150 0.2764 0.3140 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.460 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.670 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 4359 REMARK 3 ANGLE : 0.496 5882 REMARK 3 CHIRALITY : 0.042 634 REMARK 3 PLANARITY : 0.003 752 REMARK 3 DIHEDRAL : 11.953 1640 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 14 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 449 THROUGH 491 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.1172 36.9587 -5.0100 REMARK 3 T TENSOR REMARK 3 T11: 1.0767 T22: 0.7973 REMARK 3 T33: 0.7800 T12: 0.0543 REMARK 3 T13: 0.0480 T23: 0.2056 REMARK 3 L TENSOR REMARK 3 L11: 0.7851 L22: 2.8022 REMARK 3 L33: 2.5492 L12: -0.1590 REMARK 3 L13: 0.2056 L23: 0.8429 REMARK 3 S TENSOR REMARK 3 S11: 0.2184 S12: 0.6468 S13: 0.1062 REMARK 3 S21: -0.8853 S22: -0.1723 S23: -0.2878 REMARK 3 S31: -0.4288 S32: -0.4405 S33: -0.1201 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 492 THROUGH 533 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.3853 34.7295 3.2733 REMARK 3 T TENSOR REMARK 3 T11: 0.8565 T22: 0.8370 REMARK 3 T33: 0.8838 T12: 0.1262 REMARK 3 T13: 0.0998 T23: 0.0752 REMARK 3 L TENSOR REMARK 3 L11: 1.2108 L22: 3.5371 REMARK 3 L33: 3.1941 L12: 0.9184 REMARK 3 L13: 0.8757 L23: -0.2224 REMARK 3 S TENSOR REMARK 3 S11: -0.0527 S12: 0.5454 S13: 0.9126 REMARK 3 S21: 0.6090 S22: 0.2158 S23: -0.2248 REMARK 3 S31: 0.2307 S32: 0.3276 S33: -0.1164 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 534 THROUGH 619 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.9722 30.4941 14.4040 REMARK 3 T TENSOR REMARK 3 T11: 0.8304 T22: 0.6845 REMARK 3 T33: 0.7889 T12: 0.0812 REMARK 3 T13: -0.0406 T23: -0.0133 REMARK 3 L TENSOR REMARK 3 L11: 3.0398 L22: 2.8138 REMARK 3 L33: 2.8723 L12: -0.8321 REMARK 3 L13: -0.6439 L23: -0.0210 REMARK 3 S TENSOR REMARK 3 S11: 0.1715 S12: 0.3493 S13: -0.0142 REMARK 3 S21: 0.2047 S22: 0.0209 S23: 0.3486 REMARK 3 S31: 0.2374 S32: -0.0463 S33: -0.1126 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 620 THROUGH 651 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.2573 39.2069 24.9299 REMARK 3 T TENSOR REMARK 3 T11: 1.0123 T22: 0.9661 REMARK 3 T33: 1.1202 T12: -0.0126 REMARK 3 T13: 0.0993 T23: 0.0232 REMARK 3 L TENSOR REMARK 3 L11: 2.5595 L22: 3.6065 REMARK 3 L33: 3.6816 L12: -3.0402 REMARK 3 L13: -0.5171 L23: 0.8076 REMARK 3 S TENSOR REMARK 3 S11: 0.1993 S12: -0.9436 S13: 1.2149 REMARK 3 S21: 0.8103 S22: 0.0421 S23: 0.1087 REMARK 3 S31: -0.5696 S32: -0.2034 S33: -0.1499 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 652 THROUGH 706 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.2313 36.9478 30.1235 REMARK 3 T TENSOR REMARK 3 T11: 1.0464 T22: 0.8332 REMARK 3 T33: 0.8715 T12: 0.1277 REMARK 3 T13: 0.2236 T23: 0.0363 REMARK 3 L TENSOR REMARK 3 L11: 2.6552 L22: 3.9248 REMARK 3 L33: 2.9405 L12: -0.1717 REMARK 3 L13: -1.0677 L23: -0.2315 REMARK 3 S TENSOR REMARK 3 S11: 0.2434 S12: -0.2213 S13: 1.1422 REMARK 3 S21: 0.6507 S22: -0.0025 S23: 0.1187 REMARK 3 S31: -0.4686 S32: -0.4013 S33: -0.1443 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 707 THROUGH 723 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.4573 18.4554 26.7068 REMARK 3 T TENSOR REMARK 3 T11: 0.7609 T22: 1.2644 REMARK 3 T33: 1.2507 T12: 0.1831 REMARK 3 T13: -0.1361 T23: -0.0216 REMARK 3 L TENSOR REMARK 3 L11: 2.6054 L22: 4.1900 REMARK 3 L33: 1.5558 L12: 0.4719 REMARK 3 L13: -1.4047 L23: -0.7349 REMARK 3 S TENSOR REMARK 3 S11: 0.5993 S12: -0.0305 S13: -1.0936 REMARK 3 S21: 1.9564 S22: 0.3048 S23: -0.7997 REMARK 3 S31: 0.3817 S32: -0.5107 S33: -0.0696 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 449 THROUGH 475 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.1927 9.8308 16.0283 REMARK 3 T TENSOR REMARK 3 T11: 1.5207 T22: 0.8277 REMARK 3 T33: 0.5914 T12: 0.2558 REMARK 3 T13: -0.1256 T23: -0.0319 REMARK 3 L TENSOR REMARK 3 L11: 1.2185 L22: 6.1562 REMARK 3 L33: 2.5705 L12: -0.2034 REMARK 3 L13: 0.5564 L23: -0.8061 REMARK 3 S TENSOR REMARK 3 S11: -0.1333 S12: -0.8107 S13: -0.4453 REMARK 3 S21: 1.1445 S22: 0.6155 S23: -1.0615 REMARK 3 S31: 0.2849 S32: 0.0626 S33: -0.0654 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 476 THROUGH 491 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.1054 9.8661 14.6863 REMARK 3 T TENSOR REMARK 3 T11: 1.1321 T22: 0.8543 REMARK 3 T33: 1.5704 T12: 0.3639 REMARK 3 T13: -0.0657 T23: 0.0787 REMARK 3 L TENSOR REMARK 3 L11: 4.8022 L22: 2.5510 REMARK 3 L33: 5.4333 L12: -2.9556 REMARK 3 L13: -0.7552 L23: 2.4602 REMARK 3 S TENSOR REMARK 3 S11: -1.0120 S12: -1.4349 S13: -0.2313 REMARK 3 S21: 1.1573 S22: 0.5161 S23: -2.2059 REMARK 3 S31: 1.0323 S32: 0.2747 S33: -0.2490 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 492 THROUGH 507 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.1687 13.1179 4.3439 REMARK 3 T TENSOR REMARK 3 T11: 0.4664 T22: 1.4968 REMARK 3 T33: 1.4387 T12: 0.1934 REMARK 3 T13: -0.0330 T23: -0.1568 REMARK 3 L TENSOR REMARK 3 L11: 3.0797 L22: 0.5827 REMARK 3 L33: 3.5690 L12: 0.6982 REMARK 3 L13: -0.5483 L23: 1.0916 REMARK 3 S TENSOR REMARK 3 S11: -0.2587 S12: -0.3789 S13: 0.0643 REMARK 3 S21: -0.6506 S22: -0.1819 S23: -1.6331 REMARK 3 S31: -0.0205 S32: -0.2538 S33: 0.1592 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 508 THROUGH 549 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.3620 10.1932 4.6002 REMARK 3 T TENSOR REMARK 3 T11: 0.7867 T22: 0.8698 REMARK 3 T33: 0.6993 T12: 0.0283 REMARK 3 T13: 0.1218 T23: 0.1524 REMARK 3 L TENSOR REMARK 3 L11: 0.3362 L22: 3.2712 REMARK 3 L33: 1.9746 L12: -0.5552 REMARK 3 L13: 0.7619 L23: 0.4598 REMARK 3 S TENSOR REMARK 3 S11: -0.5579 S12: -0.6445 S13: 0.1068 REMARK 3 S21: 0.4757 S22: 0.3807 S23: 0.3466 REMARK 3 S31: -0.2181 S32: -0.4936 S33: -0.0777 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 550 THROUGH 611 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.5598 11.8359 -4.2680 REMARK 3 T TENSOR REMARK 3 T11: 1.0457 T22: 0.7756 REMARK 3 T33: 0.7849 T12: 0.0443 REMARK 3 T13: 0.2139 T23: -0.0315 REMARK 3 L TENSOR REMARK 3 L11: 4.0214 L22: 3.1728 REMARK 3 L33: 3.5852 L12: 0.2777 REMARK 3 L13: 1.3718 L23: 0.9875 REMARK 3 S TENSOR REMARK 3 S11: -0.0889 S12: -0.3012 S13: -0.0330 REMARK 3 S21: -0.1297 S22: 0.3901 S23: -0.0291 REMARK 3 S31: 0.3532 S32: 0.1413 S33: -0.0534 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 612 THROUGH 634 ) REMARK 3 ORIGIN FOR THE GROUP (A): 50.5642 2.4629 -12.4902 REMARK 3 T TENSOR REMARK 3 T11: 0.7903 T22: 0.8254 REMARK 3 T33: 1.0613 T12: 0.0174 REMARK 3 T13: -0.1268 T23: -0.1099 REMARK 3 L TENSOR REMARK 3 L11: 5.2971 L22: 2.0698 REMARK 3 L33: 0.2098 L12: -2.7819 REMARK 3 L13: -0.7375 L23: 0.2279 REMARK 3 S TENSOR REMARK 3 S11: 0.5930 S12: -0.9699 S13: 0.6202 REMARK 3 S21: 0.1654 S22: -0.9295 S23: -0.0471 REMARK 3 S31: 0.3161 S32: -0.1765 S33: 0.0285 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 635 THROUGH 670 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.9985 -1.5229 -14.4124 REMARK 3 T TENSOR REMARK 3 T11: 1.0582 T22: 0.8969 REMARK 3 T33: 0.9600 T12: 0.0069 REMARK 3 T13: 0.1315 T23: 0.0111 REMARK 3 L TENSOR REMARK 3 L11: 2.7701 L22: 2.6853 REMARK 3 L33: 1.5219 L12: -0.2484 REMARK 3 L13: -0.4703 L23: 0.5979 REMARK 3 S TENSOR REMARK 3 S11: 0.4030 S12: 0.0462 S13: -0.2872 REMARK 3 S21: -0.7575 S22: -0.3466 S23: -0.1915 REMARK 3 S31: -0.0118 S32: 0.4898 S33: -0.1204 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 671 THROUGH 722 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.4255 9.3326 -20.1059 REMARK 3 T TENSOR REMARK 3 T11: 1.1674 T22: 0.9512 REMARK 3 T33: 0.9623 T12: -0.0380 REMARK 3 T13: 0.1335 T23: -0.0458 REMARK 3 L TENSOR REMARK 3 L11: 1.5978 L22: 2.8348 REMARK 3 L33: 1.5845 L12: 0.4805 REMARK 3 L13: 1.6266 L23: 0.1914 REMARK 3 S TENSOR REMARK 3 S11: 0.7517 S12: 0.9040 S13: 0.8606 REMARK 3 S21: -1.0633 S22: -0.5897 S23: 0.3656 REMARK 3 S31: -0.0957 S32: -0.0304 S33: -0.0639 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8F7O COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-NOV-22. REMARK 100 THE DEPOSITION ID IS D_1000270153. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-AUG-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9786 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8092 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.430 REMARK 200 RESOLUTION RANGE LOW (A) : 200.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.9 REMARK 200 DATA REDUNDANCY : 12.50 REMARK 200 R MERGE (I) : 0.46800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 3.7900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.43 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.64 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 2.19100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.04 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 8% TACIMATE PH 8.0, 20% PEG 3350, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 43.45900 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 60.99900 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 43.45900 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 60.99900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 441 REMARK 465 GLY A 442 REMARK 465 GLY A 443 REMARK 465 ARG A 444 REMARK 465 ASP A 445 REMARK 465 ALA A 446 REMARK 465 ALA A 447 REMARK 465 ASP A 448 REMARK 465 VAL A 600 REMARK 465 LYS A 601 REMARK 465 SER A 602 REMARK 465 ARG A 603 REMARK 465 TRP A 604 REMARK 465 SER A 605 REMARK 465 GLY A 606 REMARK 465 SER A 607 REMARK 465 HIS A 608 REMARK 465 GLN A 609 REMARK 465 PHE A 610 REMARK 465 GLU A 611 REMARK 465 GLY B 441 REMARK 465 GLY B 442 REMARK 465 GLY B 443 REMARK 465 ARG B 444 REMARK 465 ASP B 445 REMARK 465 ALA B 446 REMARK 465 ALA B 447 REMARK 465 ASP B 448 REMARK 465 VAL B 600 REMARK 465 LYS B 601 REMARK 465 SER B 602 REMARK 465 ARG B 603 REMARK 465 TRP B 604 REMARK 465 SER B 605 REMARK 465 GLY B 606 REMARK 465 SER B 607 REMARK 465 HIS B 608 REMARK 465 GLN B 609 REMARK 465 PHE B 610 REMARK 465 GLY B 723 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 467 -102.52 52.12 REMARK 500 PHE A 468 -67.35 -108.76 REMARK 500 TRP A 476 93.31 -162.24 REMARK 500 ARG A 575 -16.13 67.70 REMARK 500 ASP A 576 51.86 -151.68 REMARK 500 ASN A 588 -63.58 -136.04 REMARK 500 PHE A 595 -89.81 -83.54 REMARK 500 LEU A 613 -71.30 71.65 REMARK 500 SER A 614 -64.98 65.25 REMARK 500 SER A 616 15.08 -60.69 REMARK 500 GLN A 628 -86.88 -121.27 REMARK 500 ASP A 629 -113.77 -137.26 REMARK 500 PHE B 468 -68.76 -105.69 REMARK 500 TRP B 476 94.54 -160.88 REMARK 500 ASN B 486 66.02 -68.50 REMARK 500 ARG B 575 -16.97 67.81 REMARK 500 ASP B 576 51.59 -152.28 REMARK 500 ASN B 588 -64.56 -136.23 REMARK 500 PHE B 595 36.51 -82.43 REMARK 500 LEU B 597 -60.47 -124.27 REMARK 500 LEU B 613 42.84 -91.27 REMARK 500 SER B 614 -76.44 -143.78 REMARK 500 LEU B 721 59.05 -97.11 REMARK 500 REMARK 500 REMARK: NULL DBREF 8F7O A 441 723 UNP P15056 BRAF_HUMAN 441 723 DBREF 8F7O B 441 723 UNP P15056 BRAF_HUMAN 441 723 SEQADV 8F7O GLY A 441 UNP P15056 LEU 441 CONFLICT SEQADV 8F7O GLY A 443 UNP P15056 ARG 443 CONFLICT SEQADV 8F7O ALA A 446 UNP P15056 SER 446 CONFLICT SEQADV 8F7O ALA A 447 UNP P15056 SER 447 CONFLICT SEQADV 8F7O ALA A 543 UNP P15056 ILE 543 CONFLICT SEQADV 8F7O SER A 544 UNP P15056 ILE 544 CONFLICT SEQADV 8F7O LYS A 551 UNP P15056 ILE 551 CONFLICT SEQADV 8F7O ARG A 562 UNP P15056 GLN 562 CONFLICT SEQADV 8F7O ASN A 588 UNP P15056 LEU 588 CONFLICT SEQADV 8F7O SER A 630 UNP P15056 LYS 630 CONFLICT SEQADV 8F7O GLU A 667 UNP P15056 PHE 667 CONFLICT SEQADV 8F7O SER A 673 UNP P15056 TYR 673 CONFLICT SEQADV 8F7O ARG A 688 UNP P15056 ALA 688 CONFLICT SEQADV 8F7O SER A 706 UNP P15056 LEU 706 CONFLICT SEQADV 8F7O ARG A 709 UNP P15056 GLN 709 VARIANT SEQADV 8F7O GLU A 713 UNP P15056 SER 713 CONFLICT SEQADV 8F7O GLU A 716 UNP P15056 LEU 716 CONFLICT SEQADV 8F7O GLU A 720 UNP P15056 SER 720 CONFLICT SEQADV 8F7O SER A 722 UNP P15056 PRO 722 CONFLICT SEQADV 8F7O GLY A 723 UNP P15056 LYS 723 CONFLICT SEQADV 8F7O GLY B 441 UNP P15056 LEU 441 CONFLICT SEQADV 8F7O GLY B 443 UNP P15056 ARG 443 CONFLICT SEQADV 8F7O ALA B 446 UNP P15056 SER 446 CONFLICT SEQADV 8F7O ALA B 447 UNP P15056 SER 447 CONFLICT SEQADV 8F7O ALA B 543 UNP P15056 ILE 543 CONFLICT SEQADV 8F7O SER B 544 UNP P15056 ILE 544 CONFLICT SEQADV 8F7O LYS B 551 UNP P15056 ILE 551 CONFLICT SEQADV 8F7O ARG B 562 UNP P15056 GLN 562 CONFLICT SEQADV 8F7O ASN B 588 UNP P15056 LEU 588 CONFLICT SEQADV 8F7O SER B 630 UNP P15056 LYS 630 CONFLICT SEQADV 8F7O GLU B 667 UNP P15056 PHE 667 CONFLICT SEQADV 8F7O SER B 673 UNP P15056 TYR 673 CONFLICT SEQADV 8F7O ARG B 688 UNP P15056 ALA 688 CONFLICT SEQADV 8F7O SER B 706 UNP P15056 LEU 706 CONFLICT SEQADV 8F7O ARG B 709 UNP P15056 GLN 709 VARIANT SEQADV 8F7O GLU B 713 UNP P15056 SER 713 CONFLICT SEQADV 8F7O GLU B 716 UNP P15056 LEU 716 CONFLICT SEQADV 8F7O GLU B 720 UNP P15056 SER 720 CONFLICT SEQADV 8F7O SER B 722 UNP P15056 PRO 722 CONFLICT SEQADV 8F7O GLY B 723 UNP P15056 LYS 723 CONFLICT SEQRES 1 A 283 GLY GLY GLY ARG ASP ALA ALA ASP ASP TRP GLU ILE PRO SEQRES 2 A 283 ASP GLY GLN ILE THR VAL GLY GLN ARG ILE GLY SER GLY SEQRES 3 A 283 SER PHE GLY THR VAL TYR LYS GLY LYS TRP HIS GLY ASP SEQRES 4 A 283 VAL ALA VAL LYS MET LEU ASN VAL THR ALA PRO THR PRO SEQRES 5 A 283 GLN GLN LEU GLN ALA PHE LYS ASN GLU VAL GLY VAL LEU SEQRES 6 A 283 ARG LYS THR ARG HIS VAL ASN ILE LEU LEU PHE MET GLY SEQRES 7 A 283 TYR SER THR LYS PRO GLN LEU ALA ILE VAL THR GLN TRP SEQRES 8 A 283 CYS GLU GLY SER SER LEU TYR HIS HIS LEU HIS ALA SER SEQRES 9 A 283 GLU THR LYS PHE GLU MET LYS LYS LEU ILE ASP ILE ALA SEQRES 10 A 283 ARG GLN THR ALA ARG GLY MET ASP TYR LEU HIS ALA LYS SEQRES 11 A 283 SER ILE ILE HIS ARG ASP LEU LYS SER ASN ASN ILE PHE SEQRES 12 A 283 LEU HIS GLU ASP ASN THR VAL LYS ILE GLY ASP PHE GLY SEQRES 13 A 283 LEU ALA THR VAL LYS SER ARG TRP SER GLY SER HIS GLN SEQRES 14 A 283 PHE GLU GLN LEU SER GLY SER ILE LEU TRP MET ALA PRO SEQRES 15 A 283 GLU VAL ILE ARG MET GLN ASP SER ASN PRO TYR SER PHE SEQRES 16 A 283 GLN SER ASP VAL TYR ALA PHE GLY ILE VAL LEU TYR GLU SEQRES 17 A 283 LEU MET THR GLY GLN LEU PRO TYR SER ASN ILE ASN ASN SEQRES 18 A 283 ARG ASP GLN ILE ILE GLU MET VAL GLY ARG GLY SER LEU SEQRES 19 A 283 SER PRO ASP LEU SER LYS VAL ARG SER ASN CYS PRO LYS SEQRES 20 A 283 ARG MET LYS ARG LEU MET ALA GLU CYS LEU LYS LYS LYS SEQRES 21 A 283 ARG ASP GLU ARG PRO SER PHE PRO ARG ILE LEU ALA GLU SEQRES 22 A 283 ILE GLU GLU LEU ALA ARG GLU LEU SER GLY SEQRES 1 B 283 GLY GLY GLY ARG ASP ALA ALA ASP ASP TRP GLU ILE PRO SEQRES 2 B 283 ASP GLY GLN ILE THR VAL GLY GLN ARG ILE GLY SER GLY SEQRES 3 B 283 SER PHE GLY THR VAL TYR LYS GLY LYS TRP HIS GLY ASP SEQRES 4 B 283 VAL ALA VAL LYS MET LEU ASN VAL THR ALA PRO THR PRO SEQRES 5 B 283 GLN GLN LEU GLN ALA PHE LYS ASN GLU VAL GLY VAL LEU SEQRES 6 B 283 ARG LYS THR ARG HIS VAL ASN ILE LEU LEU PHE MET GLY SEQRES 7 B 283 TYR SER THR LYS PRO GLN LEU ALA ILE VAL THR GLN TRP SEQRES 8 B 283 CYS GLU GLY SER SER LEU TYR HIS HIS LEU HIS ALA SER SEQRES 9 B 283 GLU THR LYS PHE GLU MET LYS LYS LEU ILE ASP ILE ALA SEQRES 10 B 283 ARG GLN THR ALA ARG GLY MET ASP TYR LEU HIS ALA LYS SEQRES 11 B 283 SER ILE ILE HIS ARG ASP LEU LYS SER ASN ASN ILE PHE SEQRES 12 B 283 LEU HIS GLU ASP ASN THR VAL LYS ILE GLY ASP PHE GLY SEQRES 13 B 283 LEU ALA THR VAL LYS SER ARG TRP SER GLY SER HIS GLN SEQRES 14 B 283 PHE GLU GLN LEU SER GLY SER ILE LEU TRP MET ALA PRO SEQRES 15 B 283 GLU VAL ILE ARG MET GLN ASP SER ASN PRO TYR SER PHE SEQRES 16 B 283 GLN SER ASP VAL TYR ALA PHE GLY ILE VAL LEU TYR GLU SEQRES 17 B 283 LEU MET THR GLY GLN LEU PRO TYR SER ASN ILE ASN ASN SEQRES 18 B 283 ARG ASP GLN ILE ILE GLU MET VAL GLY ARG GLY SER LEU SEQRES 19 B 283 SER PRO ASP LEU SER LYS VAL ARG SER ASN CYS PRO LYS SEQRES 20 B 283 ARG MET LYS ARG LEU MET ALA GLU CYS LEU LYS LYS LYS SEQRES 21 B 283 ARG ASP GLU ARG PRO SER PHE PRO ARG ILE LEU ALA GLU SEQRES 22 B 283 ILE GLU GLU LEU ALA ARG GLU LEU SER GLY HET QOP A 801 32 HET QOP B 801 32 HETNAM QOP 6-AMINO-5-CHLORO-N-[(1R)-1-(5-{[5-CHLORO-4- HETNAM 2 QOP (TRIFLUOROMETHYL)PYRIDIN-2-YL]CARBAMOYL}-1,3-THIAZOL- HETNAM 3 QOP 2-YL)ETHYL]PYRIMIDINE-4-CARBOXAMIDE HETSYN QOP TOVORAFENIB FORMUL 3 QOP 2(C17 H12 CL2 F3 N7 O2 S) HELIX 1 AA1 THR A 491 LYS A 507 1 17 HELIX 2 AA2 LEU A 537 ALA A 543 1 7 HELIX 3 AA3 GLU A 549 LYS A 570 1 22 HELIX 4 AA4 LYS A 578 ASN A 580 5 3 HELIX 5 AA5 ALA A 621 ARG A 626 1 6 HELIX 6 AA6 SER A 634 GLY A 652 1 19 HELIX 7 AA7 ASN A 661 ARG A 671 1 11 HELIX 8 AA8 ASP A 677 VAL A 681 5 5 HELIX 9 AA9 PRO A 686 CYS A 696 1 11 HELIX 10 AB1 SER A 706 GLY A 723 1 18 HELIX 11 AB2 THR B 491 LYS B 507 1 17 HELIX 12 AB3 LEU B 537 ALA B 543 1 7 HELIX 13 AB4 GLU B 549 LYS B 570 1 22 HELIX 14 AB5 LYS B 578 ASN B 580 5 3 HELIX 15 AB6 ALA B 621 ARG B 626 1 6 HELIX 16 AB7 SER B 634 GLY B 652 1 19 HELIX 17 AB8 ASN B 661 ARG B 671 1 11 HELIX 18 AB9 ASP B 677 VAL B 681 5 5 HELIX 19 AC1 PRO B 686 CYS B 696 1 11 HELIX 20 AC2 SER B 706 LEU B 721 1 16 SHEET 1 AA1 5 THR A 458 SER A 465 0 SHEET 2 AA1 5 THR A 470 LYS A 475 -1 O VAL A 471 N GLY A 464 SHEET 3 AA1 5 ASP A 479 MET A 484 -1 O VAL A 482 N TYR A 472 SHEET 4 AA1 5 ALA A 526 GLN A 530 -1 O THR A 529 N ALA A 481 SHEET 5 AA1 5 PHE A 516 SER A 520 -1 N GLY A 518 O VAL A 528 SHEET 1 AA2 3 GLY A 534 SER A 536 0 SHEET 2 AA2 3 ILE A 582 HIS A 585 -1 O LEU A 584 N SER A 535 SHEET 3 AA2 3 THR A 589 ILE A 592 -1 O LYS A 591 N PHE A 583 SHEET 1 AA3 5 THR B 458 SER B 465 0 SHEET 2 AA3 5 GLY B 469 LYS B 475 -1 O VAL B 471 N ILE B 463 SHEET 3 AA3 5 ASP B 479 LEU B 485 -1 O VAL B 482 N TYR B 472 SHEET 4 AA3 5 LEU B 525 GLN B 530 -1 O LEU B 525 N LEU B 485 SHEET 5 AA3 5 PHE B 516 SER B 520 -1 N GLY B 518 O VAL B 528 SHEET 1 AA4 3 GLY B 534 SER B 536 0 SHEET 2 AA4 3 ILE B 582 HIS B 585 -1 O LEU B 584 N SER B 535 SHEET 3 AA4 3 THR B 589 ILE B 592 -1 O LYS B 591 N PHE B 583 CISPEP 1 LYS A 522 PRO A 523 0 -3.97 CISPEP 2 LYS B 522 PRO B 523 0 -4.08 CRYST1 86.918 121.998 57.797 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011505 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008197 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017302 0.00000