HEADER HYDROLASE/INHIBITOR 20-NOV-22 8F7U TITLE MACROCYCLIC PLASMIN INHIBITOR CAVEAT 8F7U RESIDUES ARG B 561 AND VAL B 562 THAT ARE NEXT TO EACH OTHER CAVEAT 2 8F7U IN THE SAMPLE SEQUENCE ARE NOT PROPERLY LINKED: DISTANCE CAVEAT 3 8F7U BETWEEN C AND N IS 19.36 RESIDUES THR B 688 AND GLN B 689 CAVEAT 4 8F7U THAT ARE NEXT TO EACH OTHER IN THE SAMPLE SEQUENCE ARE NOT CAVEAT 5 8F7U PROPERLY LINKED: DISTANCE BETWEEN C AND N IS 0.95 THE CAVEAT 6 8F7U DISTANCE BETWEEN RESIDUE A GLY 560 AND RESIDUE A VAL 562 IS CAVEAT 7 8F7U 18.02 ANGSTROM. BUT THERE IS ONLY 1 RESIDUE (NOT ENOUGH CAVEAT 8 8F7U SEQUENCE) TO COVER THE GAP REGION. COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACTIVATION PEPTIDE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PLG; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS PROTEASE, INHIBITOR, HYDROLASE-INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR W.GUOJIE REVDAT 1 08-FEB-23 8F7U 0 JRNL AUTH W.GUOJIE JRNL TITL SYNTHESIS AND STRUCTURAL CHARACTERIZATION OF NEW JRNL TITL 2 MACROCYCLICPLASMIN INHIBITORS JRNL REF CHEMMEDCHEM 2023 JRNL REFN ESSN 1860-7187 REMARK 2 REMARK 2 RESOLUTION. 1.47 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2-4258 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.47 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.64 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 76260 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.173 REMARK 3 FREE R VALUE : 0.189 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 3817 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.6400 - 4.4100 1.00 2770 174 0.1771 0.1816 REMARK 3 2 4.4100 - 3.5000 1.00 2757 108 0.1556 0.1722 REMARK 3 3 3.5000 - 3.0600 1.00 2701 153 0.1724 0.1785 REMARK 3 4 3.0600 - 2.7800 1.00 2683 183 0.1795 0.1731 REMARK 3 5 2.7800 - 2.5800 1.00 2678 150 0.1819 0.2162 REMARK 3 6 2.5800 - 2.4300 1.00 2681 149 0.1800 0.1922 REMARK 3 7 2.4300 - 2.3000 1.00 2702 152 0.1730 0.2061 REMARK 3 8 2.3000 - 2.2000 1.00 2676 150 0.1687 0.1710 REMARK 3 9 2.2000 - 2.1200 1.00 2675 132 0.1640 0.1791 REMARK 3 10 2.1200 - 2.0500 1.00 2726 135 0.1748 0.1794 REMARK 3 11 2.0500 - 1.9800 1.00 2689 122 0.1721 0.1905 REMARK 3 12 1.9800 - 1.9200 1.00 2687 120 0.1662 0.1908 REMARK 3 13 1.9200 - 1.8700 1.00 2699 125 0.1689 0.2083 REMARK 3 14 1.8700 - 1.8300 1.00 2701 157 0.1721 0.1974 REMARK 3 15 1.8300 - 1.7900 1.00 2652 135 0.1777 0.2212 REMARK 3 16 1.7900 - 1.7500 1.00 2651 144 0.1823 0.2033 REMARK 3 17 1.7500 - 1.7100 1.00 2735 119 0.1929 0.2119 REMARK 3 18 1.7100 - 1.6800 1.00 2654 128 0.1753 0.2073 REMARK 3 19 1.6800 - 1.6500 1.00 2717 141 0.1638 0.1865 REMARK 3 20 1.6500 - 1.6200 1.00 2602 139 0.1690 0.2064 REMARK 3 21 1.6200 - 1.6000 1.00 2719 133 0.1657 0.1845 REMARK 3 22 1.6000 - 1.5700 1.00 2622 140 0.1746 0.2074 REMARK 3 23 1.5700 - 1.5500 1.00 2706 151 0.1758 0.1914 REMARK 3 24 1.5500 - 1.5300 1.00 2643 144 0.1778 0.2005 REMARK 3 25 1.5300 - 1.5100 1.00 2712 151 0.1788 0.2085 REMARK 3 26 1.5100 - 1.4900 1.00 2637 142 0.1899 0.2215 REMARK 3 27 1.4900 - 1.4700 0.97 2568 140 0.2045 0.2313 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.130 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.720 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 14.81 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.19 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 547 THROUGH 600 ) REMARK 3 ORIGIN FOR THE GROUP (A): 42.1934 -26.7809 34.4584 REMARK 3 T TENSOR REMARK 3 T11: 0.1094 T22: 0.2549 REMARK 3 T33: 0.2834 T12: -0.0180 REMARK 3 T13: -0.0152 T23: 0.0097 REMARK 3 L TENSOR REMARK 3 L11: 2.2460 L22: 2.8929 REMARK 3 L33: 1.6361 L12: 0.4100 REMARK 3 L13: 0.2965 L23: 0.8446 REMARK 3 S TENSOR REMARK 3 S11: -0.0095 S12: -0.0097 S13: 0.0615 REMARK 3 S21: -0.0682 S22: 0.0149 S23: -0.7105 REMARK 3 S31: -0.0017 S32: 0.4847 S33: -0.0076 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 601 THROUGH 678 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.5287 -31.3418 28.2173 REMARK 3 T TENSOR REMARK 3 T11: 0.1531 T22: 0.1831 REMARK 3 T33: 0.2039 T12: -0.0056 REMARK 3 T13: 0.0433 T23: -0.0125 REMARK 3 L TENSOR REMARK 3 L11: 1.7016 L22: 2.2893 REMARK 3 L33: 2.2160 L12: 0.0083 REMARK 3 L13: 0.0382 L23: 0.2633 REMARK 3 S TENSOR REMARK 3 S11: -0.0431 S12: 0.2263 S13: -0.0565 REMARK 3 S21: -0.2838 S22: 0.0422 S23: -0.4429 REMARK 3 S31: -0.0630 S32: 0.3932 S33: 0.0641 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 679 THROUGH 710 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.3333 -20.6081 40.5527 REMARK 3 T TENSOR REMARK 3 T11: 0.2154 T22: 0.2187 REMARK 3 T33: 0.1651 T12: -0.0411 REMARK 3 T13: -0.0283 T23: 0.0009 REMARK 3 L TENSOR REMARK 3 L11: 2.4861 L22: 1.5887 REMARK 3 L33: 2.0484 L12: -0.4091 REMARK 3 L13: -2.1719 L23: 0.2710 REMARK 3 S TENSOR REMARK 3 S11: 0.0667 S12: -0.2249 S13: 0.2131 REMARK 3 S21: 0.1695 S22: 0.0229 S23: -0.1434 REMARK 3 S31: -0.2485 S32: 0.2396 S33: -0.1068 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 711 THROUGH 737 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.6153 -19.0829 39.4533 REMARK 3 T TENSOR REMARK 3 T11: 0.1746 T22: 0.1104 REMARK 3 T33: 0.0854 T12: 0.0009 REMARK 3 T13: -0.0261 T23: -0.0021 REMARK 3 L TENSOR REMARK 3 L11: 4.4295 L22: 2.6763 REMARK 3 L33: 1.5736 L12: -1.2799 REMARK 3 L13: -1.0144 L23: 0.6230 REMARK 3 S TENSOR REMARK 3 S11: -0.0644 S12: -0.1199 S13: 0.1849 REMARK 3 S21: 0.1309 S22: 0.0019 S23: 0.0534 REMARK 3 S31: -0.1270 S32: 0.0763 S33: 0.0598 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 738 THROUGH 791 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.8241 -29.9527 36.1605 REMARK 3 T TENSOR REMARK 3 T11: 0.1015 T22: 0.1109 REMARK 3 T33: 0.0956 T12: -0.0069 REMARK 3 T13: -0.0166 T23: 0.0204 REMARK 3 L TENSOR REMARK 3 L11: 1.1753 L22: 1.7872 REMARK 3 L33: 1.6481 L12: -0.0742 REMARK 3 L13: -0.1930 L23: 0.5369 REMARK 3 S TENSOR REMARK 3 S11: 0.0268 S12: -0.0603 S13: -0.0885 REMARK 3 S21: 0.0588 S22: -0.0381 S23: -0.0933 REMARK 3 S31: 0.0154 S32: 0.1187 S33: 0.0162 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 542 THROUGH 600 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.8350 -5.1645 10.7285 REMARK 3 T TENSOR REMARK 3 T11: 0.0672 T22: 0.0834 REMARK 3 T33: 0.0846 T12: 0.0134 REMARK 3 T13: -0.0080 T23: -0.0024 REMARK 3 L TENSOR REMARK 3 L11: 0.7830 L22: 1.3130 REMARK 3 L33: 0.7676 L12: 0.0003 REMARK 3 L13: -0.0563 L23: 0.3017 REMARK 3 S TENSOR REMARK 3 S11: -0.0149 S12: 0.0070 S13: 0.0181 REMARK 3 S21: 0.0504 S22: 0.0261 S23: -0.0266 REMARK 3 S31: -0.0091 S32: 0.0120 S33: -0.0059 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 601 THROUGH 640 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.9697 -2.8958 22.8699 REMARK 3 T TENSOR REMARK 3 T11: 0.1538 T22: 0.1176 REMARK 3 T33: 0.0932 T12: 0.0187 REMARK 3 T13: -0.0257 T23: 0.0052 REMARK 3 L TENSOR REMARK 3 L11: 2.6045 L22: 2.1883 REMARK 3 L33: 3.0067 L12: 0.1983 REMARK 3 L13: -0.6809 L23: 0.9089 REMARK 3 S TENSOR REMARK 3 S11: 0.0448 S12: -0.2376 S13: -0.0705 REMARK 3 S21: 0.2867 S22: 0.0123 S23: -0.0916 REMARK 3 S31: 0.2042 S32: 0.1279 S33: 0.0384 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 641 THROUGH 684 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.9657 0.3025 9.2909 REMARK 3 T TENSOR REMARK 3 T11: 0.0787 T22: 0.0788 REMARK 3 T33: 0.0909 T12: 0.0187 REMARK 3 T13: 0.0038 T23: -0.0102 REMARK 3 L TENSOR REMARK 3 L11: 1.5739 L22: 0.7660 REMARK 3 L33: 0.7705 L12: 0.2070 REMARK 3 L13: 0.3085 L23: -0.0061 REMARK 3 S TENSOR REMARK 3 S11: 0.0034 S12: 0.0312 S13: 0.1254 REMARK 3 S21: -0.0197 S22: -0.0177 S23: 0.0568 REMARK 3 S31: -0.0687 S32: -0.0373 S33: -0.0039 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 685 THROUGH 697 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.0490 -18.4236 18.8856 REMARK 3 T TENSOR REMARK 3 T11: 0.3961 T22: 0.2738 REMARK 3 T33: 0.2078 T12: -0.0701 REMARK 3 T13: -0.0559 T23: 0.0451 REMARK 3 L TENSOR REMARK 3 L11: 0.7321 L22: 4.8208 REMARK 3 L33: 2.1553 L12: -0.9080 REMARK 3 L13: 0.8530 L23: -3.1498 REMARK 3 S TENSOR REMARK 3 S11: 0.2942 S12: -0.4240 S13: -0.3479 REMARK 3 S21: 0.5727 S22: 0.0338 S23: 0.3155 REMARK 3 S31: 0.7238 S32: -0.6078 S33: -0.2224 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 698 THROUGH 791 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.2539 -6.6454 7.6950 REMARK 3 T TENSOR REMARK 3 T11: 0.0631 T22: 0.0843 REMARK 3 T33: 0.0899 T12: 0.0091 REMARK 3 T13: 0.0051 T23: -0.0114 REMARK 3 L TENSOR REMARK 3 L11: 0.8033 L22: 1.2952 REMARK 3 L33: 0.8029 L12: 0.3217 REMARK 3 L13: 0.5828 L23: 0.3264 REMARK 3 S TENSOR REMARK 3 S11: 0.0342 S12: -0.0352 S13: 0.0345 REMARK 3 S21: 0.0240 S22: -0.0675 S23: 0.1159 REMARK 3 S31: 0.0206 S32: -0.1070 S33: 0.0386 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8F7U COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-NOV-22. REMARK 100 THE DEPOSITION ID IS D_1000270157. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-APR-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 - 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.22 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 76283 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.470 REMARK 200 RESOLUTION RANGE LOW (A) : 92.320 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.04400 REMARK 200 FOR THE DATA SET : 20.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.47 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.55 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : 6.40 REMARK 200 R MERGE FOR SHELL (I) : 0.20200 REMARK 200 R SYM FOR SHELL (I) : 0.20200 REMARK 200 FOR SHELL : 3.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.99 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.12 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 14% PEG 4000, 90-140 MM AMMONIUM REMARK 280 SULFATE, 100 MM MES, PH 4.7, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 25.15250 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 542 REMARK 465 ALA A 543 REMARK 465 PRO A 544 REMARK 465 SER A 545 REMARK 465 PHE A 546 REMARK 465 ARG A 561 REMARK 465 THR A 688 REMARK 465 GLN A 689 REMARK 465 GLY A 690 REMARK 465 THR A 691 REMARK 465 PHE A 692 REMARK 465 GLY A 693 REMARK 465 ALA A 694 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLY A 560 CA C O REMARK 470 ARG A 582 CG CD NE CZ NH1 NH2 REMARK 470 PHE A 583 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU B 623 CG CD OE1 OE2 REMARK 470 ARG B 712 NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 THR B 688 C GLN B 689 N -0.385 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 587 -12.50 -142.01 REMARK 500 HIS A 621 -52.42 -127.26 REMARK 500 VAL A 624 -72.12 -84.95 REMARK 500 PHE A 715 -102.77 -114.13 REMARK 500 LYS A 750 -70.42 71.38 REMARK 500 ASP A 751 11.97 -151.91 REMARK 500 SER A 760 -67.89 -124.11 REMARK 500 PHE B 587 -10.49 -143.54 REMARK 500 GLU B 623 -86.89 -84.36 REMARK 500 GLN B 689 17.20 -145.84 REMARK 500 PHE B 692 56.54 -93.63 REMARK 500 PHE B 715 -103.33 -107.94 REMARK 500 LYS B 750 -66.00 67.33 REMARK 500 SER B 760 -68.12 -124.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1093 DISTANCE = 5.83 ANGSTROMS REMARK 525 HOH A1094 DISTANCE = 5.86 ANGSTROMS REMARK 525 HOH A1095 DISTANCE = 6.26 ANGSTROMS REMARK 525 HOH A1096 DISTANCE = 6.42 ANGSTROMS REMARK 525 HOH A1097 DISTANCE = 6.67 ANGSTROMS REMARK 525 HOH B1168 DISTANCE = 6.72 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7T52 RELATED DB: PDB DBREF 8F7U A 542 791 UNP P00747 PLMN_HUMAN 561 810 DBREF 8F7U B 542 791 UNP P00747 PLMN_HUMAN 561 810 SEQADV 8F7U ALA A 741 UNP P00747 SER 760 ENGINEERED MUTATION SEQADV 8F7U ALA B 741 UNP P00747 SER 760 ENGINEERED MUTATION SEQRES 1 A 250 ALA ALA PRO SER PHE ASP CYS GLY LYS PRO GLN VAL GLU SEQRES 2 A 250 PRO LYS LYS CYS PRO GLY ARG VAL VAL GLY GLY CYS VAL SEQRES 3 A 250 ALA HIS PRO HIS SER TRP PRO TRP GLN VAL SER LEU ARG SEQRES 4 A 250 THR ARG PHE GLY MET HIS PHE CYS GLY GLY THR LEU ILE SEQRES 5 A 250 SER PRO GLU TRP VAL LEU THR ALA ALA HIS CYS LEU GLU SEQRES 6 A 250 LYS SER PRO ARG PRO SER SER TYR LYS VAL ILE LEU GLY SEQRES 7 A 250 ALA HIS GLN GLU VAL ASN LEU GLU PRO HIS VAL GLN GLU SEQRES 8 A 250 ILE GLU VAL SER ARG LEU PHE LEU GLU PRO THR ARG LYS SEQRES 9 A 250 ASP ILE ALA LEU LEU LYS LEU SER SER PRO ALA VAL ILE SEQRES 10 A 250 THR ASP LYS VAL ILE PRO ALA CYS LEU PRO SER PRO ASN SEQRES 11 A 250 TYR VAL VAL ALA ASP ARG THR GLU CYS PHE ILE THR GLY SEQRES 12 A 250 TRP GLY GLU THR GLN GLY THR PHE GLY ALA GLY LEU LEU SEQRES 13 A 250 LYS GLU ALA GLN LEU PRO VAL ILE GLU ASN LYS VAL CYS SEQRES 14 A 250 ASN ARG TYR GLU PHE LEU ASN GLY ARG VAL GLN SER THR SEQRES 15 A 250 GLU LEU CYS ALA GLY HIS LEU ALA GLY GLY THR ASP SER SEQRES 16 A 250 CYS GLN GLY ASP ALA GLY GLY PRO LEU VAL CYS PHE GLU SEQRES 17 A 250 LYS ASP LYS TYR ILE LEU GLN GLY VAL THR SER TRP GLY SEQRES 18 A 250 LEU GLY CYS ALA ARG PRO ASN LYS PRO GLY VAL TYR VAL SEQRES 19 A 250 ARG VAL SER ARG PHE VAL THR TRP ILE GLU GLY VAL MET SEQRES 20 A 250 ARG ASN ASN SEQRES 1 B 250 ALA ALA PRO SER PHE ASP CYS GLY LYS PRO GLN VAL GLU SEQRES 2 B 250 PRO LYS LYS CYS PRO GLY ARG VAL VAL GLY GLY CYS VAL SEQRES 3 B 250 ALA HIS PRO HIS SER TRP PRO TRP GLN VAL SER LEU ARG SEQRES 4 B 250 THR ARG PHE GLY MET HIS PHE CYS GLY GLY THR LEU ILE SEQRES 5 B 250 SER PRO GLU TRP VAL LEU THR ALA ALA HIS CYS LEU GLU SEQRES 6 B 250 LYS SER PRO ARG PRO SER SER TYR LYS VAL ILE LEU GLY SEQRES 7 B 250 ALA HIS GLN GLU VAL ASN LEU GLU PRO HIS VAL GLN GLU SEQRES 8 B 250 ILE GLU VAL SER ARG LEU PHE LEU GLU PRO THR ARG LYS SEQRES 9 B 250 ASP ILE ALA LEU LEU LYS LEU SER SER PRO ALA VAL ILE SEQRES 10 B 250 THR ASP LYS VAL ILE PRO ALA CYS LEU PRO SER PRO ASN SEQRES 11 B 250 TYR VAL VAL ALA ASP ARG THR GLU CYS PHE ILE THR GLY SEQRES 12 B 250 TRP GLY GLU THR GLN GLY THR PHE GLY ALA GLY LEU LEU SEQRES 13 B 250 LYS GLU ALA GLN LEU PRO VAL ILE GLU ASN LYS VAL CYS SEQRES 14 B 250 ASN ARG TYR GLU PHE LEU ASN GLY ARG VAL GLN SER THR SEQRES 15 B 250 GLU LEU CYS ALA GLY HIS LEU ALA GLY GLY THR ASP SER SEQRES 16 B 250 CYS GLN GLY ASP ALA GLY GLY PRO LEU VAL CYS PHE GLU SEQRES 17 B 250 LYS ASP LYS TYR ILE LEU GLN GLY VAL THR SER TRP GLY SEQRES 18 B 250 LEU GLY CYS ALA ARG PRO ASN LYS PRO GLY VAL TYR VAL SEQRES 19 B 250 ARG VAL SER ARG PHE VAL THR TRP ILE GLU GLY VAL MET SEQRES 20 B 250 ARG ASN ASN HET GGI A 801 104 HET SO4 A 802 5 HET SO4 A 803 5 HET GGI B 801 104 HET SO4 B 802 5 HET SO4 B 803 5 HET SO4 B 804 5 HET GOL B 805 6 HET SO4 B 806 5 HETNAM GGI (5S,8R,18S,21R)-N-{[4-(AMINOMETHYL)PHENYL]METHYL}-21- HETNAM 2 GGI [(BENZENESULFONYL)AMINO]-3,11,20-TRIOXO-2,5,8,12,19- HETNAM 3 GGI PENTAAZATETRACYCLO[21.2.2.2~5,8~.2~13, HETNAM 4 GGI 16~]HENTRIACONTA-1(25),13,15,23,26,28-HEXAENE-18- HETNAM 5 GGI CARBOXAMIDE HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GGI 2(C41 H48 N8 O6 S) FORMUL 4 SO4 6(O4 S 2-) FORMUL 10 GOL C3 H8 O3 FORMUL 12 HOH *465(H2 O) HELIX 1 AA1 ALA A 601 GLU A 606 5 6 HELIX 2 AA2 ARG A 610 SER A 612 5 3 HELIX 3 AA3 GLU A 706 ASN A 711 1 6 HELIX 4 AA4 CYS A 737 ALA A 741 5 5 HELIX 5 AA5 PHE A 780 ASN A 791 1 12 HELIX 6 AA6 ALA B 601 GLU B 606 5 6 HELIX 7 AA7 ARG B 610 SER B 612 5 3 HELIX 8 AA8 GLU B 706 ASN B 711 1 6 HELIX 9 AA9 PHE B 780 ASN B 791 1 12 SHEET 1 AA1 8 CYS A 566 VAL A 567 0 SHEET 2 AA1 8 LYS A 698 ILE A 705 -1 O GLU A 699 N CYS A 566 SHEET 3 AA1 8 GLU A 724 ALA A 727 -1 O CYS A 726 N ILE A 705 SHEET 4 AA1 8 GLY A 772 ARG A 776 -1 O TYR A 774 N LEU A 725 SHEET 5 AA1 8 LYS A 752 TRP A 761 -1 N TRP A 761 O VAL A 773 SHEET 6 AA1 8 PRO A 744 GLU A 749 -1 N GLU A 749 O LYS A 752 SHEET 7 AA1 8 GLU A 679 GLY A 684 -1 N PHE A 681 O VAL A 746 SHEET 8 AA1 8 LYS A 698 ILE A 705 -1 O LEU A 702 N CYS A 680 SHEET 1 AA2 7 GLN A 576 THR A 581 0 SHEET 2 AA2 7 HIS A 586 SER A 594 -1 O CYS A 588 N LEU A 579 SHEET 3 AA2 7 TRP A 597 THR A 600 -1 O LEU A 599 N THR A 591 SHEET 4 AA2 7 ALA A 648 LEU A 652 -1 O ALA A 648 N THR A 600 SHEET 5 AA2 7 GLN A 631 LEU A 640 -1 N SER A 636 O LYS A 651 SHEET 6 AA2 7 TYR A 614 LEU A 618 -1 N LEU A 618 O GLN A 631 SHEET 7 AA2 7 GLN A 576 THR A 581 -1 N ARG A 580 O LYS A 615 SHEET 1 AA3 8 CYS B 566 VAL B 567 0 SHEET 2 AA3 8 LYS B 698 ILE B 705 -1 O GLU B 699 N CYS B 566 SHEET 3 AA3 8 GLU B 724 ALA B 727 -1 O CYS B 726 N ILE B 705 SHEET 4 AA3 8 GLY B 772 ARG B 776 -1 O TYR B 774 N LEU B 725 SHEET 5 AA3 8 LYS B 752 TRP B 761 -1 N TRP B 761 O VAL B 773 SHEET 6 AA3 8 PRO B 744 GLU B 749 -1 N GLU B 749 O LYS B 752 SHEET 7 AA3 8 GLU B 679 GLY B 684 -1 N PHE B 681 O VAL B 746 SHEET 8 AA3 8 LYS B 698 ILE B 705 -1 O LEU B 702 N CYS B 680 SHEET 1 AA4 7 GLN B 576 THR B 581 0 SHEET 2 AA4 7 HIS B 586 SER B 594 -1 O CYS B 588 N LEU B 579 SHEET 3 AA4 7 TRP B 597 THR B 600 -1 O LEU B 599 N THR B 591 SHEET 4 AA4 7 ALA B 648 LEU B 652 -1 O ALA B 648 N THR B 600 SHEET 5 AA4 7 GLN B 631 LEU B 640 -1 N SER B 636 O LYS B 651 SHEET 6 AA4 7 TYR B 614 LEU B 618 -1 N VAL B 616 O ILE B 633 SHEET 7 AA4 7 GLN B 576 THR B 581 -1 N ARG B 580 O LYS B 615 SSBOND 1 CYS A 548 CYS A 666 1555 1555 2.05 SSBOND 2 CYS A 558 CYS A 566 1555 1555 2.05 SSBOND 3 CYS A 588 CYS A 604 1555 1555 2.06 SSBOND 4 CYS A 680 CYS A 747 1555 1555 2.06 SSBOND 5 CYS A 710 CYS A 726 1555 1555 2.01 SSBOND 6 CYS A 737 CYS A 765 1555 1555 2.05 SSBOND 7 CYS B 548 CYS B 666 1555 1555 2.09 SSBOND 8 CYS B 558 CYS B 566 1555 1555 2.08 SSBOND 9 CYS B 588 CYS B 604 1555 1555 2.05 SSBOND 10 CYS B 680 CYS B 747 1555 1555 2.05 SSBOND 11 CYS B 710 CYS B 726 1555 1555 2.04 SSBOND 12 CYS B 737 CYS B 765 1555 1555 2.04 CRYST1 48.710 50.305 92.456 90.00 93.11 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020530 0.000000 0.001114 0.00000 SCALE2 0.000000 0.019879 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010832 0.00000