HEADER TRANSCRIPTION 22-NOV-22 8F8U TITLE BIFUNCTIONAL LIGASE/REPRESSOR BIRA FROM KLEBSIELLA PNEUMONIAE (DOMAIN TITLE 2 SWAPPED DIMER) COMPND MOL_ID: 1; COMPND 2 MOLECULE: BIFUNCTIONAL LIGASE/REPRESSOR BIRA; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: BIOTIN OPERON REPRESSOR,BIOTIN--[ACETYL-COA-CARBOXYLASE] COMPND 5 LIGASE,BIOTIN--PROTEIN LIGASE,BIOTIN-[ACETYL-COA CARBOXYLASE] COMPND 6 SYNTHETASE; COMPND 7 EC: 6.3.4.15; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: KLEBSIELLA PNEUMONIAE SUBSP. PNEUMONIAE 1158; SOURCE 3 ORGANISM_TAXID: 1392499; SOURCE 4 GENE: BIRA, B4U61_27335, B5L96_27980, BL124_00027250, BN49_4485, SOURCE 5 DDJ63_29720, DRB11_28835, EAO17_15035, FXN67_30565, G7Z27_25945, SOURCE 6 GJJ08_025595, GNE24_27625, GNG14_18750, HV479_27705, SOURCE 7 NCTC11679_05451, NCTC204_01612, NCTC3279_04746, NCTC5047_03297, SOURCE 8 NCTC5052_03568, NCTC8849_00281, NCTC9140_00986, NCTC9637_06311, SOURCE 9 NCTC9645_02159, NCTC9661_00981, SAMEA3499874_05300, SOURCE 10 SAMEA3499901_05308, SAMEA3500057_05333, SAMEA3512100_05201, SOURCE 11 SAMEA3538828_05246, SAMEA3649758_05372, SAMEA3720909_05478, SOURCE 12 SAMEA3727643_05796, SAMEA3727679_05497, SAMEA4364603_05401; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 14 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 15 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 16 EXPRESSION_SYSTEM_PLASMID: KLPNC.17896.A.B1 KEYWDS SSGCID, STRUCTURAL GENOMICS, SEATTLE STRUCTURAL GENOMICS CENTER FOR KEYWDS 2 INFECTIOUS DISEASE, OXIDOREDUCTASE-OXIDOREDUCTASE INHIBITOR COMPLEX, KEYWDS 3 TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE,SEATTLE AUTHOR 2 STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 2 22-NOV-23 8F8U 1 REMARK REVDAT 1 30-NOV-22 8F8U 0 JRNL AUTH L.LIU,K.P.BATTAILE,S.LOVELL JRNL TITL BIFUNCTIONAL LIGASE/REPRESSOR BIRA FROM KLEBSIELLA JRNL TITL 2 PNEUMONIAE (DOMAIN SWAPPED DIMER) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.74 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.3 REMARK 3 NUMBER OF REFLECTIONS : 20186 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.217 REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.255 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.960 REMARK 3 FREE R VALUE TEST SET COUNT : 1001 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.7400 - 5.4400 0.99 3142 170 0.1930 0.2035 REMARK 3 2 5.4400 - 4.3200 1.00 3038 146 0.1846 0.2475 REMARK 3 3 4.3200 - 3.7800 1.00 2988 168 0.2171 0.2675 REMARK 3 4 3.7800 - 3.4300 1.00 2954 161 0.2443 0.3066 REMARK 3 5 3.4300 - 3.1900 1.00 2986 145 0.2828 0.3479 REMARK 3 6 3.1900 - 3.0000 0.97 2839 147 0.3359 0.3786 REMARK 3 7 3.0000 - 2.8500 0.42 1238 64 0.3535 0.4054 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.350 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.690 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 4629 REMARK 3 ANGLE : 0.788 6282 REMARK 3 CHIRALITY : 0.055 731 REMARK 3 PLANARITY : 0.007 806 REMARK 3 DIHEDRAL : 18.533 1678 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 89 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.6797 16.3195 33.5975 REMARK 3 T TENSOR REMARK 3 T11: 0.6919 T22: 0.9425 REMARK 3 T33: 0.7154 T12: 0.0320 REMARK 3 T13: 0.1327 T23: 0.0279 REMARK 3 L TENSOR REMARK 3 L11: 6.0935 L22: 3.7701 REMARK 3 L33: 2.9798 L12: 2.1598 REMARK 3 L13: 3.0615 L23: 2.2309 REMARK 3 S TENSOR REMARK 3 S11: 0.1524 S12: -0.5297 S13: -0.6741 REMARK 3 S21: 0.1728 S22: -0.3352 S23: 0.7534 REMARK 3 S31: 0.1499 S32: -0.6716 S33: 0.1579 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 90 THROUGH 175 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.8841 27.2602 49.3296 REMARK 3 T TENSOR REMARK 3 T11: 0.4727 T22: 0.5502 REMARK 3 T33: 0.2227 T12: 0.0560 REMARK 3 T13: 0.0648 T23: 0.0342 REMARK 3 L TENSOR REMARK 3 L11: 3.3052 L22: 7.7109 REMARK 3 L33: 3.8034 L12: -0.1876 REMARK 3 L13: 1.3655 L23: -1.8202 REMARK 3 S TENSOR REMARK 3 S11: 0.3343 S12: 0.1916 S13: 0.0967 REMARK 3 S21: 0.0684 S22: -0.2037 S23: 0.1666 REMARK 3 S31: -0.2571 S32: 0.0823 S33: -0.1244 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 176 THROUGH 317 ) REMARK 3 ORIGIN FOR THE GROUP (A): 49.0906 25.2532 54.0056 REMARK 3 T TENSOR REMARK 3 T11: 0.6467 T22: 0.6524 REMARK 3 T33: 0.4011 T12: -0.0357 REMARK 3 T13: 0.0158 T23: 0.0373 REMARK 3 L TENSOR REMARK 3 L11: 4.5164 L22: 4.2145 REMARK 3 L33: 2.2343 L12: -0.7034 REMARK 3 L13: 2.2838 L23: -0.1366 REMARK 3 S TENSOR REMARK 3 S11: -0.0075 S12: -0.0454 S13: -0.0105 REMARK 3 S21: 0.4170 S22: -0.0823 S23: -0.7727 REMARK 3 S31: 0.1460 S32: 0.3096 S33: 0.1375 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 3 THROUGH 89 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.6834 46.9470 34.5347 REMARK 3 T TENSOR REMARK 3 T11: 1.0757 T22: 0.9016 REMARK 3 T33: 0.9961 T12: 0.0358 REMARK 3 T13: -0.0563 T23: 0.0786 REMARK 3 L TENSOR REMARK 3 L11: 1.2488 L22: 3.7525 REMARK 3 L33: 0.1516 L12: 1.5596 REMARK 3 L13: -0.0360 L23: 0.5108 REMARK 3 S TENSOR REMARK 3 S11: -0.2079 S12: 0.2007 S13: 0.5607 REMARK 3 S21: -0.1459 S22: 0.2929 S23: 0.1051 REMARK 3 S31: -0.5156 S32: 0.1998 S33: -0.0521 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 90 THROUGH 317 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.8088 7.3087 15.2031 REMARK 3 T TENSOR REMARK 3 T11: 0.4887 T22: 0.6401 REMARK 3 T33: 0.3875 T12: 0.0208 REMARK 3 T13: -0.0047 T23: 0.1275 REMARK 3 L TENSOR REMARK 3 L11: 3.3386 L22: 3.3463 REMARK 3 L33: 3.7634 L12: -0.3062 REMARK 3 L13: -1.6239 L23: 1.4979 REMARK 3 S TENSOR REMARK 3 S11: -0.1890 S12: 0.2325 S13: -0.4492 REMARK 3 S21: -0.1489 S22: -0.1768 S23: 0.0455 REMARK 3 S31: -0.0073 S32: 0.3420 S33: 0.3866 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8F8U COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-NOV-22. REMARK 100 THE DEPOSITION ID IS D_1000270203. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-OCT-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS-II REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97949 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI 111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20235 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.850 REMARK 200 RESOLUTION RANGE LOW (A) : 84.093 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.2 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : 0.06200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.98 REMARK 200 COMPLETENESS FOR SHELL (%) : 49.3 REMARK 200 DATA REDUNDANCY IN SHELL : 6.40 REMARK 200 R MERGE FOR SHELL (I) : 1.70900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.71 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.13 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MORPHEUS G3: 20%(V/V) GLYCEROL, 10% REMARK 280 W/V PEG 4000, 100 MM IMIDAZOLE/MES, PH 6.5, 20 MM SODIUM FORMATE, REMARK 280 20 MM AMMONIUM ACETATE, 20 MM SODIUM CITRATE TRIBASIC, 20 MM REMARK 280 POTASSIUM SODIUM TARTRATE AND 20 MM SODIUM OXAMATE, REMARK 280 KLPNC.17896.A.B1.PW39036 AT 30 MG/ML. TRAY: CLOVER-LIU-S-045 / REMARK 280 B1 , PUCK: CPS5110_06, CRYO: 150% MORPHEUS G3. PROTEIN CRYSTALS REMARK 280 WERE DEHYDRATED IN THIS SOLUTION FOR 3 DAYS BEFORE FREEZING., REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 49.95500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 77.87000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 49.95500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 77.87000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3980 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27700 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -7 REMARK 465 ALA A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 GLY A 115 REMARK 465 ARG A 116 REMARK 465 GLY A 117 REMARK 465 ARG A 118 REMARK 465 ARG A 119 REMARK 465 GLY A 120 REMARK 465 ARG A 121 REMARK 465 LYS A 122 REMARK 465 TRP A 123 REMARK 465 PHE A 124 REMARK 465 ARG A 212 REMARK 465 ARG A 213 REMARK 465 VAL A 214 REMARK 465 GLU A 215 REMARK 465 SER A 216 REMARK 465 ASP A 217 REMARK 465 VAL A 218 REMARK 465 VAL A 219 REMARK 465 ASN A 220 REMARK 465 GLN A 221 REMARK 465 SER A 318 REMARK 465 ALA A 319 REMARK 465 GLU A 320 REMARK 465 MET B -7 REMARK 465 ALA B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 LYS B 2 REMARK 465 GLY B 115 REMARK 465 ARG B 116 REMARK 465 GLY B 117 REMARK 465 ARG B 118 REMARK 465 ARG B 119 REMARK 465 GLY B 120 REMARK 465 ARG B 121 REMARK 465 LYS B 122 REMARK 465 TRP B 123 REMARK 465 PHE B 124 REMARK 465 ARG B 212 REMARK 465 ARG B 213 REMARK 465 VAL B 214 REMARK 465 GLU B 215 REMARK 465 SER B 216 REMARK 465 ASP B 217 REMARK 465 VAL B 218 REMARK 465 VAL B 219 REMARK 465 ASN B 220 REMARK 465 SER B 318 REMARK 465 ALA B 319 REMARK 465 GLU B 320 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 1 CG SD CE REMARK 470 GLU A 23 CG CD OE1 OE2 REMARK 470 LYS A 38 CG CD CE NZ REMARK 470 ASP A 99 CG OD1 OD2 REMARK 470 GLU A 266 CG CD OE1 OE2 REMARK 470 ASP A 282 CG OD1 OD2 REMARK 470 LYS A 283 CG CD CE NZ REMARK 470 GLU A 313 CG CD OE1 OE2 REMARK 470 ARG A 317 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 140 CG CD OE1 OE2 REMARK 470 GLN B 141 CG CD OE1 NE2 REMARK 470 GLN B 221 CG CD OE1 NE2 REMARK 470 LYS B 244 CG CD CE NZ REMARK 470 LYS B 267 CG CD CE NZ REMARK 470 LYS B 283 CG CD CE NZ REMARK 470 GLU B 313 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OG SER A 32 O GLY B 17 4456 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 15 -6.92 -59.79 REMARK 500 ASN A 175 27.08 -140.91 REMARK 500 REMARK 500 REMARK: NULL DBREF1 8F8U A 1 320 UNP A0A0W7ZMT5_KLEPN DBREF2 8F8U A A0A0W7ZMT5 1 320 DBREF1 8F8U B 1 320 UNP A0A0W7ZMT5_KLEPN DBREF2 8F8U B A0A0W7ZMT5 1 320 SEQADV 8F8U MET A -7 UNP A0A0W7ZMT INITIATING METHIONINE SEQADV 8F8U ALA A -6 UNP A0A0W7ZMT EXPRESSION TAG SEQADV 8F8U HIS A -5 UNP A0A0W7ZMT EXPRESSION TAG SEQADV 8F8U HIS A -4 UNP A0A0W7ZMT EXPRESSION TAG SEQADV 8F8U HIS A -3 UNP A0A0W7ZMT EXPRESSION TAG SEQADV 8F8U HIS A -2 UNP A0A0W7ZMT EXPRESSION TAG SEQADV 8F8U HIS A -1 UNP A0A0W7ZMT EXPRESSION TAG SEQADV 8F8U HIS A 0 UNP A0A0W7ZMT EXPRESSION TAG SEQADV 8F8U MET B -7 UNP A0A0W7ZMT INITIATING METHIONINE SEQADV 8F8U ALA B -6 UNP A0A0W7ZMT EXPRESSION TAG SEQADV 8F8U HIS B -5 UNP A0A0W7ZMT EXPRESSION TAG SEQADV 8F8U HIS B -4 UNP A0A0W7ZMT EXPRESSION TAG SEQADV 8F8U HIS B -3 UNP A0A0W7ZMT EXPRESSION TAG SEQADV 8F8U HIS B -2 UNP A0A0W7ZMT EXPRESSION TAG SEQADV 8F8U HIS B -1 UNP A0A0W7ZMT EXPRESSION TAG SEQADV 8F8U HIS B 0 UNP A0A0W7ZMT EXPRESSION TAG SEQRES 1 A 328 MET ALA HIS HIS HIS HIS HIS HIS MET LYS ASP HIS THR SEQRES 2 A 328 ILE PRO LEU THR LEU ILE SER ILE LEU ALA ASP GLY GLU SEQRES 3 A 328 PHE HIS SER GLY GLU GLN LEU GLY GLU GLN LEU GLY MET SEQRES 4 A 328 SER ARG ALA ALA ILE ASN LYS HIS ILE GLN THR LEU ARG SEQRES 5 A 328 ASP TRP GLY VAL ASP VAL PHE THR VAL PRO GLY LYS GLY SEQRES 6 A 328 TYR SER LEU PRO GLU PRO ILE HIS LEU LEU ASP GLU LYS SEQRES 7 A 328 LYS ILE SER GLN GLU ILE ASP HIS GLY ARG VAL THR VAL SEQRES 8 A 328 LEU PRO VAL ILE ASP SER THR ASN GLN TYR LEU LEU ASP SEQRES 9 A 328 ARG LEU ASP GLU LEU THR SER GLY ASP ALA CYS VAL ALA SEQRES 10 A 328 GLU TYR GLN GLN ALA GLY ARG GLY ARG ARG GLY ARG LYS SEQRES 11 A 328 TRP PHE SER PRO PHE GLY ALA ASN LEU TYR LEU SER MET SEQRES 12 A 328 TYR TRP ARG LEU GLU GLN GLY PRO ALA ALA ALA ILE GLY SEQRES 13 A 328 LEU SER LEU VAL ILE GLY ILE VAL ILE ALA GLU VAL LEU SEQRES 14 A 328 GLN GLN LEU GLY ALA GLU GLN VAL ARG VAL LYS TRP PRO SEQRES 15 A 328 ASN ASP ILE TYR LEU GLN ASP ARG LYS LEU SER GLY ILE SEQRES 16 A 328 LEU VAL GLU LEU THR GLY LYS THR GLY ASP ALA ALA GLN SEQRES 17 A 328 ILE VAL SER GLY ALA GLY ILE ASN LEU VAL MET ARG ARG SEQRES 18 A 328 VAL GLU SER ASP VAL VAL ASN GLN GLY TRP ILE SER LEU SEQRES 19 A 328 GLN GLU ALA GLY VAL VAL ILE ASP ARG ASN LEU LEU ALA SEQRES 20 A 328 ALA ARG LEU ILE LYS GLU LEU ARG LEU GLY LEU GLU LEU SEQRES 21 A 328 PHE GLU GLN GLU GLY LEU ALA PRO TYR LEU PRO ARG TRP SEQRES 22 A 328 GLU LYS LEU ASP ASN PHE ILE HIS ARG PRO VAL LYS LEU SEQRES 23 A 328 ILE ILE GLY ASP LYS GLU ILE TYR GLY ILE SER ARG GLY SEQRES 24 A 328 ILE ASP ALA GLN GLY ALA LEU LEU LEU GLU GLN ASP GLY SEQRES 25 A 328 VAL ILE LYS ALA TRP VAL GLY GLY GLU ILE SER LEU ARG SEQRES 26 A 328 SER ALA GLU SEQRES 1 B 328 MET ALA HIS HIS HIS HIS HIS HIS MET LYS ASP HIS THR SEQRES 2 B 328 ILE PRO LEU THR LEU ILE SER ILE LEU ALA ASP GLY GLU SEQRES 3 B 328 PHE HIS SER GLY GLU GLN LEU GLY GLU GLN LEU GLY MET SEQRES 4 B 328 SER ARG ALA ALA ILE ASN LYS HIS ILE GLN THR LEU ARG SEQRES 5 B 328 ASP TRP GLY VAL ASP VAL PHE THR VAL PRO GLY LYS GLY SEQRES 6 B 328 TYR SER LEU PRO GLU PRO ILE HIS LEU LEU ASP GLU LYS SEQRES 7 B 328 LYS ILE SER GLN GLU ILE ASP HIS GLY ARG VAL THR VAL SEQRES 8 B 328 LEU PRO VAL ILE ASP SER THR ASN GLN TYR LEU LEU ASP SEQRES 9 B 328 ARG LEU ASP GLU LEU THR SER GLY ASP ALA CYS VAL ALA SEQRES 10 B 328 GLU TYR GLN GLN ALA GLY ARG GLY ARG ARG GLY ARG LYS SEQRES 11 B 328 TRP PHE SER PRO PHE GLY ALA ASN LEU TYR LEU SER MET SEQRES 12 B 328 TYR TRP ARG LEU GLU GLN GLY PRO ALA ALA ALA ILE GLY SEQRES 13 B 328 LEU SER LEU VAL ILE GLY ILE VAL ILE ALA GLU VAL LEU SEQRES 14 B 328 GLN GLN LEU GLY ALA GLU GLN VAL ARG VAL LYS TRP PRO SEQRES 15 B 328 ASN ASP ILE TYR LEU GLN ASP ARG LYS LEU SER GLY ILE SEQRES 16 B 328 LEU VAL GLU LEU THR GLY LYS THR GLY ASP ALA ALA GLN SEQRES 17 B 328 ILE VAL SER GLY ALA GLY ILE ASN LEU VAL MET ARG ARG SEQRES 18 B 328 VAL GLU SER ASP VAL VAL ASN GLN GLY TRP ILE SER LEU SEQRES 19 B 328 GLN GLU ALA GLY VAL VAL ILE ASP ARG ASN LEU LEU ALA SEQRES 20 B 328 ALA ARG LEU ILE LYS GLU LEU ARG LEU GLY LEU GLU LEU SEQRES 21 B 328 PHE GLU GLN GLU GLY LEU ALA PRO TYR LEU PRO ARG TRP SEQRES 22 B 328 GLU LYS LEU ASP ASN PHE ILE HIS ARG PRO VAL LYS LEU SEQRES 23 B 328 ILE ILE GLY ASP LYS GLU ILE TYR GLY ILE SER ARG GLY SEQRES 24 B 328 ILE ASP ALA GLN GLY ALA LEU LEU LEU GLU GLN ASP GLY SEQRES 25 B 328 VAL ILE LYS ALA TRP VAL GLY GLY GLU ILE SER LEU ARG SEQRES 26 B 328 SER ALA GLU HET IMD A 401 5 HET IMD B 401 5 HETNAM IMD IMIDAZOLE FORMUL 3 IMD 2(C3 H5 N2 1+) FORMUL 5 HOH *2(H2 O) HELIX 1 AA1 HIS A 4 ALA A 15 1 12 HELIX 2 AA2 SER A 21 GLY A 30 1 10 HELIX 3 AA3 SER A 32 TRP A 46 1 15 HELIX 4 AA4 ASP A 68 HIS A 78 1 11 HELIX 5 AA5 SER A 89 ASP A 96 1 8 HELIX 6 AA6 ARG A 97 LEU A 101 5 5 HELIX 7 AA7 GLY A 142 ILE A 147 5 6 HELIX 8 AA8 GLY A 148 LEU A 164 1 17 HELIX 9 AA9 LEU A 226 GLY A 230 5 5 HELIX 10 AB1 ASP A 234 GLY A 257 1 24 HELIX 11 AB2 PRO A 260 ASP A 269 1 10 HELIX 12 AB3 HIS B 4 ALA B 15 1 12 HELIX 13 AB4 SER B 21 GLY B 30 1 10 HELIX 14 AB5 SER B 32 TRP B 46 1 15 HELIX 15 AB6 ASP B 68 HIS B 78 1 11 HELIX 16 AB7 SER B 89 ASP B 96 1 8 HELIX 17 AB8 ARG B 97 LEU B 101 5 5 HELIX 18 AB9 GLY B 142 ALA B 146 5 5 HELIX 19 AC1 GLY B 148 LEU B 164 1 17 HELIX 20 AC2 ASP B 234 GLY B 257 1 24 HELIX 21 AC3 PRO B 260 ASP B 269 1 10 SHEET 1 AA1 2 PHE A 51 VAL A 53 0 SHEET 2 AA1 2 GLY A 57 SER A 59 -1 O GLY A 57 N VAL A 53 SHEET 1 AA2 7 VAL A 81 VAL A 83 0 SHEET 2 AA2 7 ALA A 106 ALA A 109 1 O ALA A 106 N THR A 82 SHEET 3 AA2 7 ASN A 130 LEU A 139 -1 O TYR A 132 N ALA A 109 SHEET 4 AA2 7 ALA A 199 ASN A 208 -1 O SER A 203 N MET A 135 SHEET 5 AA2 7 ARG A 182 THR A 192 -1 N LEU A 188 O GLY A 204 SHEET 6 AA2 7 ASP A 176 LEU A 179 -1 N ILE A 177 O SER A 185 SHEET 7 AA2 7 ARG A 170 LYS A 172 -1 N ARG A 170 O TYR A 178 SHEET 1 AA3 2 VAL A 86 ILE A 87 0 SHEET 2 AA3 2 TYR A 111 GLN A 112 1 O TYR A 111 N ILE A 87 SHEET 1 AA4 4 PRO A 275 ILE A 280 0 SHEET 2 AA4 4 LYS A 283 ILE A 292 -1 O ILE A 285 N LEU A 278 SHEET 3 AA4 4 LEU A 298 GLN A 302 -1 O GLU A 301 N ILE A 288 SHEET 4 AA4 4 VAL A 305 TRP A 309 -1 O VAL A 305 N GLN A 302 SHEET 1 AA5 2 PHE B 51 VAL B 53 0 SHEET 2 AA5 2 GLY B 57 SER B 59 -1 O SER B 59 N PHE B 51 SHEET 1 AA6 7 VAL B 81 VAL B 83 0 SHEET 2 AA6 7 ALA B 106 ALA B 109 1 O VAL B 108 N THR B 82 SHEET 3 AA6 7 ASN B 130 LEU B 139 -1 O TYR B 132 N ALA B 109 SHEET 4 AA6 7 ALA B 199 ASN B 208 -1 O SER B 203 N MET B 135 SHEET 5 AA6 7 ARG B 182 THR B 192 -1 N LEU B 188 O GLY B 204 SHEET 6 AA6 7 ASP B 176 LEU B 179 -1 N LEU B 179 O ARG B 182 SHEET 7 AA6 7 VAL B 169 LYS B 172 -1 N ARG B 170 O TYR B 178 SHEET 1 AA7 2 VAL B 86 ILE B 87 0 SHEET 2 AA7 2 TYR B 111 GLN B 112 1 O TYR B 111 N ILE B 87 SHEET 1 AA8 5 VAL B 305 TRP B 309 0 SHEET 2 AA8 5 LEU B 298 GLN B 302 -1 N GLN B 302 O VAL B 305 SHEET 3 AA8 5 LYS B 283 ILE B 292 -1 N ILE B 288 O GLU B 301 SHEET 4 AA8 5 PRO B 275 ILE B 280 -1 N VAL B 276 O GLY B 287 SHEET 5 AA8 5 GLU B 313 LEU B 316 -1 O SER B 315 N LYS B 277 CISPEP 1 TRP A 173 PRO A 174 0 -3.51 CISPEP 2 TRP B 173 PRO B 174 0 -5.18 CRYST1 99.910 155.740 58.750 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010009 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006421 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017021 0.00000