HEADER IMMUNE SYSTEM 28-NOV-22 8FAS TITLE CRYSTAL STRUCTURE OF KY230 FAB IN COMPLEX WITH CIRCUMSPOROZOITE TITLE 2 PROTEIN NANP5 PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: KY230 ANTIBODY, HEAVY CHAIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: KY230 ANTIBODY, LIGHT CHAIN; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: CIRCUMSPOROZOITE PROTEIN NANP5 PEPTIDE; COMPND 11 CHAIN: C; COMPND 12 SYNONYM: CS; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 6 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 10 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 11 ORGANISM_TAXID: 10090; SOURCE 12 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 13 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 15 MOL_ID: 3; SOURCE 16 SYNTHETIC: YES; SOURCE 17 ORGANISM_SCIENTIFIC: PLASMODIUM FALCIPARUM (ISOLATE NF54); SOURCE 18 ORGANISM_COMMON: MALARIA PARASITE P. FALCIPARUM; SOURCE 19 ORGANISM_TAXID: 5843 KEYWDS MALARIA, ANTIBODY, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR A.KASSARDJIAN,E.THAI,J.P.JULIEN REVDAT 3 20-MAR-24 8FAS 1 SOURCE REVDAT 2 13-DEC-23 8FAS 1 JRNL REVDAT 1 01-NOV-23 8FAS 0 JRNL AUTH E.THAI,R.MURUGAN,S.BINTER,C.BURN ASCHNER,K.PRIETO, JRNL AUTH 2 A.KASSARDJIAN,A.S.OBRAZTSOVA,R.W.KANG,Y.FLORES-GARCIA, JRNL AUTH 3 S.MATHIS-TORRES,K.LI,G.Q.HORN,R.H.C.HUNTWORK,J.M.BOLSCHER, JRNL AUTH 4 M.H.C.DE BRUIJNI,R.SAUERWEIN,S.M.DENNISON,G.D.TOMARAS, JRNL AUTH 5 F.ZAVALA,P.KELLAM,H.WARDEMANN,J.P.JULIEN JRNL TITL MOLECULAR DETERMINANTS OF CROSS-REACTIVITY AND POTENCY BY JRNL TITL 2 VH3-33 ANTIBODIES AGAINST THE PLASMODIUM FALCIPARUM JRNL TITL 3 CIRCUMSPOROZOITE PROTEIN. JRNL REF CELL REP V. 42 13330 2023 JRNL REFN ESSN 2211-1247 JRNL PMID 38007690 JRNL DOI 10.1016/J.CELREP.2023.113330 REMARK 2 REMARK 2 RESOLUTION. 1.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19_4080 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.92 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 66440 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.166 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.198 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.010 REMARK 3 FREE R VALUE TEST SET COUNT : 2000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.9200 - 3.7300 1.00 4886 152 0.1418 0.1535 REMARK 3 2 3.7300 - 2.9600 1.00 4712 146 0.1554 0.2048 REMARK 3 3 2.9600 - 2.5900 1.00 4635 144 0.1755 0.2082 REMARK 3 4 2.5900 - 2.3500 1.00 4593 143 0.1747 0.2164 REMARK 3 5 2.3500 - 2.1800 1.00 4621 142 0.1608 0.2005 REMARK 3 6 2.1800 - 2.0600 1.00 4576 142 0.1549 0.1633 REMARK 3 7 2.0600 - 1.9500 1.00 4587 143 0.1680 0.2097 REMARK 3 8 1.9500 - 1.8700 1.00 4549 141 0.1616 0.1971 REMARK 3 9 1.8700 - 1.8000 1.00 4578 142 0.1681 0.2205 REMARK 3 10 1.8000 - 1.7300 1.00 4566 142 0.1697 0.2183 REMARK 3 11 1.7300 - 1.6800 1.00 4547 142 0.1993 0.2455 REMARK 3 12 1.6800 - 1.6300 1.00 4523 139 0.2506 0.3156 REMARK 3 13 1.6300 - 1.5900 1.00 4558 142 0.2543 0.2942 REMARK 3 14 1.5900 - 1.5500 1.00 4509 140 0.2446 0.2773 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.800 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.014 3631 REMARK 3 ANGLE : 1.232 4959 REMARK 3 CHIRALITY : 0.083 554 REMARK 3 PLANARITY : 0.010 642 REMARK 3 DIHEDRAL : 12.976 1325 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 1:120 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.320 0.077 -5.315 REMARK 3 T TENSOR REMARK 3 T11: 0.1685 T22: 0.1131 REMARK 3 T33: 0.1428 T12: -0.0315 REMARK 3 T13: 0.0267 T23: -0.0042 REMARK 3 L TENSOR REMARK 3 L11: 1.8100 L22: 0.6782 REMARK 3 L33: 2.1717 L12: -0.2301 REMARK 3 L13: 1.1012 L23: 0.2917 REMARK 3 S TENSOR REMARK 3 S11: 0.0861 S12: -0.1119 S13: -0.0364 REMARK 3 S21: 0.1598 S22: -0.0822 S23: 0.1024 REMARK 3 S31: 0.2482 S32: -0.1497 S33: 0.0039 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND RESID 121:215 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.667 -9.484 -33.330 REMARK 3 T TENSOR REMARK 3 T11: 0.0950 T22: 0.1306 REMARK 3 T33: 0.1755 T12: 0.0024 REMARK 3 T13: -0.0153 T23: -0.0041 REMARK 3 L TENSOR REMARK 3 L11: 0.8394 L22: 3.2247 REMARK 3 L33: 1.9138 L12: -0.6531 REMARK 3 L13: -0.5410 L23: 1.8365 REMARK 3 S TENSOR REMARK 3 S11: 0.0312 S12: 0.0262 S13: -0.0456 REMARK 3 S21: -0.0507 S22: -0.1237 S23: 0.1062 REMARK 3 S31: 0.0100 S32: -0.1875 S33: 0.0941 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN B AND RESID 1:112 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.276 -0.842 -13.759 REMARK 3 T TENSOR REMARK 3 T11: 0.1558 T22: 0.2011 REMARK 3 T33: 0.1594 T12: 0.0379 REMARK 3 T13: -0.0310 T23: -0.0170 REMARK 3 L TENSOR REMARK 3 L11: 0.6312 L22: 0.5850 REMARK 3 L33: 3.4571 L12: 0.3066 REMARK 3 L13: 0.0783 L23: 1.2765 REMARK 3 S TENSOR REMARK 3 S11: 0.0303 S12: 0.0928 S13: -0.0525 REMARK 3 S21: 0.0525 S22: 0.0928 S23: -0.1272 REMARK 3 S31: 0.0881 S32: 0.3400 S33: -0.1266 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN B AND RESID 113:212 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.095 -0.735 -44.702 REMARK 3 T TENSOR REMARK 3 T11: 0.1405 T22: 0.1899 REMARK 3 T33: 0.1265 T12: 0.0279 REMARK 3 T13: -0.0180 T23: 0.0099 REMARK 3 L TENSOR REMARK 3 L11: 3.1830 L22: 1.1786 REMARK 3 L33: 1.8826 L12: -0.4025 REMARK 3 L13: 0.4014 L23: 0.2393 REMARK 3 S TENSOR REMARK 3 S11: 0.0238 S12: 0.4409 S13: 0.0644 REMARK 3 S21: -0.1997 S22: -0.0388 S23: 0.0929 REMARK 3 S31: -0.1951 S32: -0.1809 S33: 0.0244 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: ( CHAIN C AND RESID 4:14 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.599 -0.084 7.612 REMARK 3 T TENSOR REMARK 3 T11: 0.2619 T22: 0.2071 REMARK 3 T33: 0.1565 T12: 0.0158 REMARK 3 T13: -0.0347 T23: -0.0181 REMARK 3 L TENSOR REMARK 3 L11: 2.9146 L22: 1.7610 REMARK 3 L33: 2.6907 L12: 0.8275 REMARK 3 L13: -1.0361 L23: -1.0476 REMARK 3 S TENSOR REMARK 3 S11: 0.0523 S12: -0.4727 S13: 0.0705 REMARK 3 S21: 0.0603 S22: 0.0561 S23: 0.1196 REMARK 3 S31: 0.1840 S32: -0.0749 S33: -0.0967 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8FAS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-NOV-22. REMARK 100 THE DEPOSITION ID IS D_1000270307. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-OCT-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0332 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 66528 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.550 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 13.10 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.57 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.49 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M DI-AMMONIUM TARTRATE, 20% REMARK 280 PEG3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 27.11850 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 67.76600 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.67600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 67.76600 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 27.11850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 30.67600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6300 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19310 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 CYS A 216 REMARK 465 GLU B 213 REMARK 465 CYS B 214 REMARK 465 ASN C 1 REMARK 465 ALA C 2 REMARK 465 ASN C 3 REMARK 465 ASN C 15 REMARK 465 PRO C 16 REMARK 465 ASN C 17 REMARK 465 ALA C 18 REMARK 465 ASN C 19 REMARK 465 PRO C 20 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN B 100 CG CD OE1 NE2 REMARK 470 LYS B 126 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 579 O HOH A 630 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 101 CB - CG - OD1 ANGL. DEV. = 5.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 101 -62.75 -103.98 REMARK 500 ASP A 144 61.41 72.17 REMARK 500 VAL B 51 -45.69 75.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 637 DISTANCE = 5.96 ANGSTROMS DBREF 8FAS A 1 216 PDB 8FAS 8FAS 1 216 DBREF 8FAS B 1 214 PDB 8FAS 8FAS 1 214 DBREF 8FAS C 1 20 UNP P02893 CSP_PLAFA 148 167 SEQRES 1 A 223 GLN VAL GLN LEU VAL GLU SER GLY GLY GLY VAL VAL GLN SEQRES 2 A 223 PRO GLY ARG SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 A 223 PHE THR PHE SER ASP TYR GLY MET HIS TRP VAL ARG GLN SEQRES 4 A 223 ALA PRO GLY LYS GLY LEU GLU TRP VAL ALA ILE ILE TRP SEQRES 5 A 223 HIS ASP GLY SER ASN LYS TYR TYR VAL ASP SER VAL LYS SEQRES 6 A 223 GLY ARG PHE THR ILE SER ARG ASP ASN SER LYS ASN THR SEQRES 7 A 223 LEU TYR LEU GLN MET ASN SER LEU ARG ALA GLU ASP THR SEQRES 8 A 223 ALA VAL TYR TYR CYS ALA ARG ALA ALA SER SER PHE GLY SEQRES 9 A 223 SER GLY PHE ASP TYR TRP GLY GLN GLY THR LEU VAL THR SEQRES 10 A 223 VAL SER SER ALA SER THR LYS GLY PRO SER VAL PHE PRO SEQRES 11 A 223 LEU ALA PRO SER SER LYS SER THR SER GLY GLY THR ALA SEQRES 12 A 223 ALA LEU GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO SEQRES 13 A 223 VAL THR VAL SER TRP ASN SER GLY ALA LEU THR SER GLY SEQRES 14 A 223 VAL HIS THR PHE PRO ALA VAL LEU GLN SER SER GLY LEU SEQRES 15 A 223 TYR SER LEU SER SER VAL VAL THR VAL PRO SER SER SER SEQRES 16 A 223 LEU GLY THR GLN THR TYR ILE CYS ASN VAL ASN HIS LYS SEQRES 17 A 223 PRO SER ASN THR LYS VAL ASP LYS LYS VAL GLU PRO LYS SEQRES 18 A 223 SER CYS SEQRES 1 B 219 ASP VAL VAL MET THR GLN SER PRO LEU SER LEU PRO VAL SEQRES 2 B 219 THR LEU GLY GLN PRO ALA SER ILE PHE CYS ARG SER SER SEQRES 3 B 219 GLN SER LEU VAL TYR SER ASP GLY ASN THR TYR LEU ASN SEQRES 4 B 219 TRP PHE GLN ARG ARG PRO GLY GLN SER PRO ARG ARG LEU SEQRES 5 B 219 ILE TYR LYS VAL SER ASP ARG ASP SER GLY VAL PRO ASP SEQRES 6 B 219 ARG PHE SER GLY SER GLY SER GLY THR ASP PHE THR LEU SEQRES 7 B 219 GLN ILE SER ARG VAL GLU ALA GLU ASP VAL GLY VAL TYR SEQRES 8 B 219 TYR CYS MET GLN GLY THR HIS TRP PRO PRO THR PHE GLY SEQRES 9 B 219 GLN GLY THR LYS VAL GLU ILE LYS ARG THR VAL ALA ALA SEQRES 10 B 219 PRO SER VAL PHE ILE PHE PRO PRO SER ASP GLU GLN LEU SEQRES 11 B 219 LYS SER GLY THR ALA SER VAL VAL CYS LEU LEU ASN ASN SEQRES 12 B 219 PHE TYR PRO ARG GLU ALA LYS VAL GLN TRP LYS VAL ASP SEQRES 13 B 219 ASN ALA LEU GLN SER GLY ASN SER GLN GLU SER VAL THR SEQRES 14 B 219 GLU GLN ASP SER LYS ASP SER THR TYR SER LEU SER SER SEQRES 15 B 219 THR LEU THR LEU SER LYS ALA ASP TYR GLU LYS HIS LYS SEQRES 16 B 219 VAL TYR ALA CYS GLU VAL THR HIS GLN GLY LEU SER SER SEQRES 17 B 219 PRO VAL THR LYS SER PHE ASN ARG GLY GLU CYS SEQRES 1 C 20 ASN ALA ASN PRO ASN ALA ASN PRO ASN ALA ASN PRO ASN SEQRES 2 C 20 ALA ASN PRO ASN ALA ASN PRO HET EDO A 301 4 HET EDO A 302 4 HET EDO B 301 4 HET EDO B 302 4 HET EDO B 303 4 HET EDO B 304 4 HET EDO B 305 4 HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 4 EDO 7(C2 H6 O2) FORMUL 11 HOH *505(H2 O) HELIX 1 AA1 THR A 28 TYR A 32 5 5 HELIX 2 AA2 ASP A 61 LYS A 64 5 4 HELIX 3 AA3 ASN A 73 LYS A 75 5 3 HELIX 4 AA4 ARG A 83 THR A 87 5 5 HELIX 5 AA5 SER A 98 SER A 100A 5 4 HELIX 6 AA6 SER A 156 ALA A 158 5 3 HELIX 7 AA7 SER A 187 LEU A 189 5 3 HELIX 8 AA8 LYS A 201 ASN A 204 5 4 HELIX 9 AA9 GLU B 79 VAL B 83 5 5 HELIX 10 AB1 SER B 121 SER B 127 1 7 HELIX 11 AB2 LYS B 183 GLU B 187 1 5 SHEET 1 AA1 4 GLN A 3 SER A 7 0 SHEET 2 AA1 4 LEU A 18 SER A 25 -1 O ALA A 23 N VAL A 5 SHEET 3 AA1 4 THR A 77 MET A 82 -1 O MET A 82 N LEU A 18 SHEET 4 AA1 4 PHE A 67 ASP A 72 -1 N THR A 68 O GLN A 81 SHEET 1 AA2 6 VAL A 11 VAL A 12 0 SHEET 2 AA2 6 THR A 107 VAL A 111 1 O THR A 110 N VAL A 12 SHEET 3 AA2 6 ALA A 88 ALA A 95 -1 N TYR A 90 O THR A 107 SHEET 4 AA2 6 MET A 34 ALA A 40 -1 N VAL A 37 O TYR A 91 SHEET 5 AA2 6 GLY A 44 ILE A 51 -1 O GLU A 46 N ARG A 38 SHEET 6 AA2 6 LYS A 57 TYR A 59 -1 O TYR A 58 N ILE A 50 SHEET 1 AA3 4 VAL A 11 VAL A 12 0 SHEET 2 AA3 4 THR A 107 VAL A 111 1 O THR A 110 N VAL A 12 SHEET 3 AA3 4 ALA A 88 ALA A 95 -1 N TYR A 90 O THR A 107 SHEET 4 AA3 4 PHE A 100C TRP A 103 -1 O TYR A 102 N ARG A 94 SHEET 1 AA4 4 SER A 120 LEU A 124 0 SHEET 2 AA4 4 THR A 135 TYR A 145 -1 O GLY A 139 N LEU A 124 SHEET 3 AA4 4 TYR A 176 PRO A 185 -1 O LEU A 178 N VAL A 142 SHEET 4 AA4 4 VAL A 163 THR A 165 -1 N HIS A 164 O VAL A 181 SHEET 1 AA5 4 THR A 131 SER A 132 0 SHEET 2 AA5 4 THR A 135 TYR A 145 -1 O THR A 135 N SER A 132 SHEET 3 AA5 4 TYR A 176 PRO A 185 -1 O LEU A 178 N VAL A 142 SHEET 4 AA5 4 VAL A 169 LEU A 170 -1 N VAL A 169 O SER A 177 SHEET 1 AA6 3 THR A 151 TRP A 154 0 SHEET 2 AA6 3 ILE A 195 HIS A 200 -1 O ASN A 197 N SER A 153 SHEET 3 AA6 3 THR A 205 LYS A 210 -1 O THR A 205 N HIS A 200 SHEET 1 AA7 4 MET B 4 SER B 7 0 SHEET 2 AA7 4 ALA B 19 SER B 25 -1 O ARG B 24 N THR B 5 SHEET 3 AA7 4 ASP B 70 ILE B 75 -1 O ILE B 75 N ALA B 19 SHEET 4 AA7 4 PHE B 62 SER B 67 -1 N SER B 63 O GLN B 74 SHEET 1 AA8 6 SER B 10 THR B 14 0 SHEET 2 AA8 6 THR B 102 LYS B 107 1 O LYS B 103 N LEU B 11 SHEET 3 AA8 6 GLY B 84 GLN B 90 -1 N GLY B 84 O VAL B 104 SHEET 4 AA8 6 LEU B 33 ARG B 38 -1 N ARG B 38 O VAL B 85 SHEET 5 AA8 6 ARG B 45 TYR B 49 -1 O LEU B 47 N TRP B 35 SHEET 6 AA8 6 ASP B 53 ARG B 54 -1 O ASP B 53 N TYR B 49 SHEET 1 AA9 4 SER B 10 THR B 14 0 SHEET 2 AA9 4 THR B 102 LYS B 107 1 O LYS B 103 N LEU B 11 SHEET 3 AA9 4 GLY B 84 GLN B 90 -1 N GLY B 84 O VAL B 104 SHEET 4 AA9 4 THR B 97 PHE B 98 -1 O THR B 97 N GLN B 90 SHEET 1 AB1 4 SER B 114 PHE B 118 0 SHEET 2 AB1 4 THR B 129 PHE B 139 -1 O ASN B 137 N SER B 114 SHEET 3 AB1 4 TYR B 173 SER B 182 -1 O LEU B 175 N LEU B 136 SHEET 4 AB1 4 SER B 159 VAL B 163 -1 N GLN B 160 O THR B 178 SHEET 1 AB2 4 ALA B 153 LEU B 154 0 SHEET 2 AB2 4 LYS B 145 VAL B 150 -1 N VAL B 150 O ALA B 153 SHEET 3 AB2 4 VAL B 191 THR B 197 -1 O GLU B 195 N GLN B 147 SHEET 4 AB2 4 VAL B 205 ASN B 210 -1 O VAL B 205 N VAL B 196 SSBOND 1 CYS A 22 CYS A 92 1555 1555 2.08 SSBOND 2 CYS A 140 CYS A 196 1555 1555 2.06 SSBOND 3 CYS B 23 CYS B 88 1555 1555 2.15 SSBOND 4 CYS B 134 CYS B 194 1555 1555 2.09 CISPEP 1 PHE A 146 PRO A 147 0 -8.54 CISPEP 2 GLU A 148 PRO A 149 0 1.34 CISPEP 3 SER B 7 PRO B 8 0 -9.55 CISPEP 4 SER B 7 PRO B 8 0 -6.97 CISPEP 5 TRP B 94 PRO B 95 0 -5.64 CISPEP 6 TYR B 140 PRO B 141 0 1.32 CRYST1 54.237 61.352 135.532 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018438 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016299 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007378 0.00000