data_8FEH # _entry.id 8FEH # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8FEH pdb_00008feh 10.2210/pdb8feh/pdb WWPDB D_1000270495 ? ? EMDB EMD-29027 ? ? # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'CryoEM structure of bacteriophage Q-beta coat protein dimer with AYGG linker' _pdbx_database_related.db_id EMD-29027 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8FEH _pdbx_database_status.recvd_initial_deposition_date 2022-12-06 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category FoldIt _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Newton, T.P.' 1 0000-0002-2148-525X 'Zhao, L.' 2 0000-0002-0792-1473 'Finn, M.G.' 3 0000-0001-8247-3108 'Kopylov, M.' 4 0000-0003-0188-9799 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'CryoEM structure of bacteriophage Q-beta coat protein dimer with AYGG linker' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Newton, T.P.' 1 0000-0002-2148-525X primary 'Zhao, L.' 2 0000-0002-0792-1473 primary 'Kopylov, M.' 3 0000-0003-0188-9799 primary 'Finn, M.G.' 4 0000-0001-8247-3108 # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Minor capsid protein A1 fusion' _entity.formula_weight 28604.137 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'A1 read-through protein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;AKLETVTLGNIGKDGKQTLVLNPRGVNPTNGVASLSQAGAVPALEKRVTVSVSQPSRNRKNYKVQVKIQNPTACTANGSC DPSVTRQAYADVTFSFTQYSTDEERAFVRTELAALLASPLLIDAIDQLNPAYAYGGAKLETVTLGNIGKDGKQTLVLNPR GVNPTNGVASLSQAGAVPALEKRVTVSVSQPSRNRKNYKVQVKIQNPTACTANGSCDPSVTRQAYADVTFSFTQYSTDEE RAFVRTELAALLASPLLIDAIDQLNPAY ; _entity_poly.pdbx_seq_one_letter_code_can ;AKLETVTLGNIGKDGKQTLVLNPRGVNPTNGVASLSQAGAVPALEKRVTVSVSQPSRNRKNYKVQVKIQNPTACTANGSC DPSVTRQAYADVTFSFTQYSTDEERAFVRTELAALLASPLLIDAIDQLNPAYAYGGAKLETVTLGNIGKDGKQTLVLNPR GVNPTNGVASLSQAGAVPALEKRVTVSVSQPSRNRKNYKVQVKIQNPTACTANGSCDPSVTRQAYADVTFSFTQYSTDEE RAFVRTELAALLASPLLIDAIDQLNPAY ; _entity_poly.pdbx_strand_id D _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 LYS n 1 3 LEU n 1 4 GLU n 1 5 THR n 1 6 VAL n 1 7 THR n 1 8 LEU n 1 9 GLY n 1 10 ASN n 1 11 ILE n 1 12 GLY n 1 13 LYS n 1 14 ASP n 1 15 GLY n 1 16 LYS n 1 17 GLN n 1 18 THR n 1 19 LEU n 1 20 VAL n 1 21 LEU n 1 22 ASN n 1 23 PRO n 1 24 ARG n 1 25 GLY n 1 26 VAL n 1 27 ASN n 1 28 PRO n 1 29 THR n 1 30 ASN n 1 31 GLY n 1 32 VAL n 1 33 ALA n 1 34 SER n 1 35 LEU n 1 36 SER n 1 37 GLN n 1 38 ALA n 1 39 GLY n 1 40 ALA n 1 41 VAL n 1 42 PRO n 1 43 ALA n 1 44 LEU n 1 45 GLU n 1 46 LYS n 1 47 ARG n 1 48 VAL n 1 49 THR n 1 50 VAL n 1 51 SER n 1 52 VAL n 1 53 SER n 1 54 GLN n 1 55 PRO n 1 56 SER n 1 57 ARG n 1 58 ASN n 1 59 ARG n 1 60 LYS n 1 61 ASN n 1 62 TYR n 1 63 LYS n 1 64 VAL n 1 65 GLN n 1 66 VAL n 1 67 LYS n 1 68 ILE n 1 69 GLN n 1 70 ASN n 1 71 PRO n 1 72 THR n 1 73 ALA n 1 74 CYS n 1 75 THR n 1 76 ALA n 1 77 ASN n 1 78 GLY n 1 79 SER n 1 80 CYS n 1 81 ASP n 1 82 PRO n 1 83 SER n 1 84 VAL n 1 85 THR n 1 86 ARG n 1 87 GLN n 1 88 ALA n 1 89 TYR n 1 90 ALA n 1 91 ASP n 1 92 VAL n 1 93 THR n 1 94 PHE n 1 95 SER n 1 96 PHE n 1 97 THR n 1 98 GLN n 1 99 TYR n 1 100 SER n 1 101 THR n 1 102 ASP n 1 103 GLU n 1 104 GLU n 1 105 ARG n 1 106 ALA n 1 107 PHE n 1 108 VAL n 1 109 ARG n 1 110 THR n 1 111 GLU n 1 112 LEU n 1 113 ALA n 1 114 ALA n 1 115 LEU n 1 116 LEU n 1 117 ALA n 1 118 SER n 1 119 PRO n 1 120 LEU n 1 121 LEU n 1 122 ILE n 1 123 ASP n 1 124 ALA n 1 125 ILE n 1 126 ASP n 1 127 GLN n 1 128 LEU n 1 129 ASN n 1 130 PRO n 1 131 ALA n 1 132 TYR n 1 133 ALA n 1 134 TYR n 1 135 GLY n 1 136 GLY n 1 137 ALA n 1 138 LYS n 1 139 LEU n 1 140 GLU n 1 141 THR n 1 142 VAL n 1 143 THR n 1 144 LEU n 1 145 GLY n 1 146 ASN n 1 147 ILE n 1 148 GLY n 1 149 LYS n 1 150 ASP n 1 151 GLY n 1 152 LYS n 1 153 GLN n 1 154 THR n 1 155 LEU n 1 156 VAL n 1 157 LEU n 1 158 ASN n 1 159 PRO n 1 160 ARG n 1 161 GLY n 1 162 VAL n 1 163 ASN n 1 164 PRO n 1 165 THR n 1 166 ASN n 1 167 GLY n 1 168 VAL n 1 169 ALA n 1 170 SER n 1 171 LEU n 1 172 SER n 1 173 GLN n 1 174 ALA n 1 175 GLY n 1 176 ALA n 1 177 VAL n 1 178 PRO n 1 179 ALA n 1 180 LEU n 1 181 GLU n 1 182 LYS n 1 183 ARG n 1 184 VAL n 1 185 THR n 1 186 VAL n 1 187 SER n 1 188 VAL n 1 189 SER n 1 190 GLN n 1 191 PRO n 1 192 SER n 1 193 ARG n 1 194 ASN n 1 195 ARG n 1 196 LYS n 1 197 ASN n 1 198 TYR n 1 199 LYS n 1 200 VAL n 1 201 GLN n 1 202 VAL n 1 203 LYS n 1 204 ILE n 1 205 GLN n 1 206 ASN n 1 207 PRO n 1 208 THR n 1 209 ALA n 1 210 CYS n 1 211 THR n 1 212 ALA n 1 213 ASN n 1 214 GLY n 1 215 SER n 1 216 CYS n 1 217 ASP n 1 218 PRO n 1 219 SER n 1 220 VAL n 1 221 THR n 1 222 ARG n 1 223 GLN n 1 224 ALA n 1 225 TYR n 1 226 ALA n 1 227 ASP n 1 228 VAL n 1 229 THR n 1 230 PHE n 1 231 SER n 1 232 PHE n 1 233 THR n 1 234 GLN n 1 235 TYR n 1 236 SER n 1 237 THR n 1 238 ASP n 1 239 GLU n 1 240 GLU n 1 241 ARG n 1 242 ALA n 1 243 PHE n 1 244 VAL n 1 245 ARG n 1 246 THR n 1 247 GLU n 1 248 LEU n 1 249 ALA n 1 250 ALA n 1 251 LEU n 1 252 LEU n 1 253 ALA n 1 254 SER n 1 255 PRO n 1 256 LEU n 1 257 LEU n 1 258 ILE n 1 259 ASP n 1 260 ALA n 1 261 ILE n 1 262 ASP n 1 263 GLN n 1 264 LEU n 1 265 ASN n 1 266 PRO n 1 267 ALA n 1 268 TYR n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 136 ? ? ? ? ? ? ? ? ? 'Qubevirus durum' 39803 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 1 2 sample 'Biological sequence' 137 268 ? ? ? ? ? ? ? ? ? 'Qubevirus durum' 39803 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A1_BPQBE _struct_ref.pdbx_db_accession Q8LTE1 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;AKLETVTLGNIGKDGKQTLVLNPRGVNPTNGVASLSQAGAVPALEKRVTVSVSQPSRNRKNYKVQVKIQNPTACTANGSC DPSVTRQAYADVTFSFTQYSTDEERAFVRTELAALLASPLLIDAIDQLNPAY ; _struct_ref.pdbx_align_begin 2 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8FEH D 1 ? 132 ? Q8LTE1 2 ? 133 ? 1 132 2 1 8FEH D 137 ? 268 ? Q8LTE1 2 ? 133 ? 137 268 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 8FEH ALA D 133 ? UNP Q8LTE1 ? ? linker 133 1 1 8FEH TYR D 134 ? UNP Q8LTE1 ? ? linker 134 2 1 8FEH GLY D 135 ? UNP Q8LTE1 ? ? linker 135 3 1 8FEH GLY D 136 ? UNP Q8LTE1 ? ? linker 136 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8FEH _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _struct.entry_id 8FEH _struct.title 'CryoEM structure of bacteriophage Q-beta coat protein dimer with AYGG linker' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8FEH _struct_keywords.text 'coat protein, q-beta, fusion, VIRUS LIKE PARTICLE' _struct_keywords.pdbx_keywords 'VIRUS LIKE PARTICLE' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 101 ? ALA A 117 ? THR D 101 ALA D 117 1 ? 17 HELX_P HELX_P2 AA2 SER A 118 ? ASP A 126 ? SER D 118 ASP D 126 1 ? 9 HELX_P HELX_P3 AA3 VAL A 177 ? GLU A 181 ? VAL D 177 GLU D 181 5 ? 5 HELX_P HELX_P4 AA4 THR A 237 ? LEU A 252 ? THR D 237 LEU D 252 1 ? 16 HELX_P HELX_P5 AA5 SER A 254 ? ASP A 262 ? SER D 254 ASP D 262 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 9 ? AA2 ? 2 ? AA3 ? 3 ? AA4 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA1 6 7 ? anti-parallel AA1 7 8 ? anti-parallel AA1 8 9 ? anti-parallel AA2 1 2 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA4 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 6 ? ILE A 11 ? VAL D 6 ILE D 11 AA1 2 GLN A 17 ? ASN A 27 ? GLN D 17 ASN D 27 AA1 3 VAL A 32 ? SER A 36 ? VAL D 32 SER D 36 AA1 4 VAL A 48 ? SER A 53 ? VAL D 48 SER D 53 AA1 5 TYR A 62 ? ILE A 68 ? TYR D 62 ILE D 68 AA1 6 TYR A 89 ? PHE A 96 ? TYR D 89 PHE D 96 AA1 7 ALA A 226 ? PHE A 232 ? ALA D 226 PHE D 232 AA1 8 TYR A 198 ? ILE A 204 ? TYR D 198 ILE D 204 AA1 9 VAL A 184 ? SER A 187 ? VAL D 184 SER D 187 AA2 1 PRO A 71 ? ALA A 73 ? PRO D 71 ALA D 73 AA2 2 VAL A 84 ? GLN A 87 ? VAL D 84 GLN D 87 AA3 1 VAL A 142 ? ILE A 147 ? VAL D 142 ILE D 147 AA3 2 GLN A 153 ? PRO A 159 ? GLN D 153 PRO D 159 AA3 3 LEU A 171 ? SER A 172 ? LEU D 171 SER D 172 AA4 1 THR A 208 ? ALA A 209 ? THR D 208 ALA D 209 AA4 2 VAL A 220 ? THR A 221 ? VAL D 220 THR D 221 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N LEU A 8 ? N LEU D 8 O LEU A 19 ? O LEU D 19 AA1 2 3 N ASN A 22 ? N ASN D 22 O SER A 36 ? O SER D 36 AA1 3 4 N LEU A 35 ? N LEU D 35 O VAL A 48 ? O VAL D 48 AA1 4 5 N SER A 51 ? N SER D 51 O GLN A 65 ? O GLN D 65 AA1 5 6 N VAL A 66 ? N VAL D 66 O VAL A 92 ? O VAL D 92 AA1 6 7 N ASP A 91 ? N ASP D 91 O THR A 229 ? O THR D 229 AA1 7 8 O PHE A 232 ? O PHE D 232 N TYR A 198 ? N TYR D 198 AA1 8 9 O GLN A 201 ? O GLN D 201 N SER A 187 ? N SER D 187 AA2 1 2 N THR A 72 ? N THR D 72 O THR A 85 ? O THR D 85 AA3 1 2 N LEU A 144 ? N LEU D 144 O LEU A 155 ? O LEU D 155 AA3 2 3 N ASN A 158 ? N ASN D 158 O SER A 172 ? O SER D 172 AA4 1 2 N THR A 208 ? N THR D 208 O THR A 221 ? O THR D 221 # _atom_sites.entry_id 8FEH _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 1 ALA ALA D . n A 1 2 LYS 2 2 2 LYS LYS D . n A 1 3 LEU 3 3 3 LEU LEU D . n A 1 4 GLU 4 4 4 GLU GLU D . n A 1 5 THR 5 5 5 THR THR D . n A 1 6 VAL 6 6 6 VAL VAL D . n A 1 7 THR 7 7 7 THR THR D . n A 1 8 LEU 8 8 8 LEU LEU D . n A 1 9 GLY 9 9 9 GLY GLY D . n A 1 10 ASN 10 10 10 ASN ASN D . n A 1 11 ILE 11 11 11 ILE ILE D . n A 1 12 GLY 12 12 12 GLY GLY D . n A 1 13 LYS 13 13 13 LYS LYS D . n A 1 14 ASP 14 14 14 ASP ASP D . n A 1 15 GLY 15 15 15 GLY GLY D . n A 1 16 LYS 16 16 16 LYS LYS D . n A 1 17 GLN 17 17 17 GLN GLN D . n A 1 18 THR 18 18 18 THR THR D . n A 1 19 LEU 19 19 19 LEU LEU D . n A 1 20 VAL 20 20 20 VAL VAL D . n A 1 21 LEU 21 21 21 LEU LEU D . n A 1 22 ASN 22 22 22 ASN ASN D . n A 1 23 PRO 23 23 23 PRO PRO D . n A 1 24 ARG 24 24 24 ARG ARG D . n A 1 25 GLY 25 25 25 GLY GLY D . n A 1 26 VAL 26 26 26 VAL VAL D . n A 1 27 ASN 27 27 27 ASN ASN D . n A 1 28 PRO 28 28 28 PRO PRO D . n A 1 29 THR 29 29 29 THR THR D . n A 1 30 ASN 30 30 30 ASN ASN D . n A 1 31 GLY 31 31 31 GLY GLY D . n A 1 32 VAL 32 32 32 VAL VAL D . n A 1 33 ALA 33 33 33 ALA ALA D . n A 1 34 SER 34 34 34 SER SER D . n A 1 35 LEU 35 35 35 LEU LEU D . n A 1 36 SER 36 36 36 SER SER D . n A 1 37 GLN 37 37 37 GLN GLN D . n A 1 38 ALA 38 38 38 ALA ALA D . n A 1 39 GLY 39 39 39 GLY GLY D . n A 1 40 ALA 40 40 40 ALA ALA D . n A 1 41 VAL 41 41 41 VAL VAL D . n A 1 42 PRO 42 42 42 PRO PRO D . n A 1 43 ALA 43 43 43 ALA ALA D . n A 1 44 LEU 44 44 44 LEU LEU D . n A 1 45 GLU 45 45 45 GLU GLU D . n A 1 46 LYS 46 46 46 LYS LYS D . n A 1 47 ARG 47 47 47 ARG ARG D . n A 1 48 VAL 48 48 48 VAL VAL D . n A 1 49 THR 49 49 49 THR THR D . n A 1 50 VAL 50 50 50 VAL VAL D . n A 1 51 SER 51 51 51 SER SER D . n A 1 52 VAL 52 52 52 VAL VAL D . n A 1 53 SER 53 53 53 SER SER D . n A 1 54 GLN 54 54 54 GLN GLN D . n A 1 55 PRO 55 55 55 PRO PRO D . n A 1 56 SER 56 56 56 SER SER D . n A 1 57 ARG 57 57 57 ARG ARG D . n A 1 58 ASN 58 58 58 ASN ASN D . n A 1 59 ARG 59 59 59 ARG ARG D . n A 1 60 LYS 60 60 60 LYS LYS D . n A 1 61 ASN 61 61 61 ASN ASN D . n A 1 62 TYR 62 62 62 TYR TYR D . n A 1 63 LYS 63 63 63 LYS LYS D . n A 1 64 VAL 64 64 64 VAL VAL D . n A 1 65 GLN 65 65 65 GLN GLN D . n A 1 66 VAL 66 66 66 VAL VAL D . n A 1 67 LYS 67 67 67 LYS LYS D . n A 1 68 ILE 68 68 68 ILE ILE D . n A 1 69 GLN 69 69 69 GLN GLN D . n A 1 70 ASN 70 70 70 ASN ASN D . n A 1 71 PRO 71 71 71 PRO PRO D . n A 1 72 THR 72 72 72 THR THR D . n A 1 73 ALA 73 73 73 ALA ALA D . n A 1 74 CYS 74 74 74 CYS CYS D . n A 1 75 THR 75 75 75 THR THR D . n A 1 76 ALA 76 76 76 ALA ALA D . n A 1 77 ASN 77 77 77 ASN ASN D . n A 1 78 GLY 78 78 78 GLY GLY D . n A 1 79 SER 79 79 79 SER SER D . n A 1 80 CYS 80 80 80 CYS CYS D . n A 1 81 ASP 81 81 81 ASP ASP D . n A 1 82 PRO 82 82 82 PRO PRO D . n A 1 83 SER 83 83 83 SER SER D . n A 1 84 VAL 84 84 84 VAL VAL D . n A 1 85 THR 85 85 85 THR THR D . n A 1 86 ARG 86 86 86 ARG ARG D . n A 1 87 GLN 87 87 87 GLN GLN D . n A 1 88 ALA 88 88 88 ALA ALA D . n A 1 89 TYR 89 89 89 TYR TYR D . n A 1 90 ALA 90 90 90 ALA ALA D . n A 1 91 ASP 91 91 91 ASP ASP D . n A 1 92 VAL 92 92 92 VAL VAL D . n A 1 93 THR 93 93 93 THR THR D . n A 1 94 PHE 94 94 94 PHE PHE D . n A 1 95 SER 95 95 95 SER SER D . n A 1 96 PHE 96 96 96 PHE PHE D . n A 1 97 THR 97 97 97 THR THR D . n A 1 98 GLN 98 98 98 GLN GLN D . n A 1 99 TYR 99 99 99 TYR TYR D . n A 1 100 SER 100 100 100 SER SER D . n A 1 101 THR 101 101 101 THR THR D . n A 1 102 ASP 102 102 102 ASP ASP D . n A 1 103 GLU 103 103 103 GLU GLU D . n A 1 104 GLU 104 104 104 GLU GLU D . n A 1 105 ARG 105 105 105 ARG ARG D . n A 1 106 ALA 106 106 106 ALA ALA D . n A 1 107 PHE 107 107 107 PHE PHE D . n A 1 108 VAL 108 108 108 VAL VAL D . n A 1 109 ARG 109 109 109 ARG ARG D . n A 1 110 THR 110 110 110 THR THR D . n A 1 111 GLU 111 111 111 GLU GLU D . n A 1 112 LEU 112 112 112 LEU LEU D . n A 1 113 ALA 113 113 113 ALA ALA D . n A 1 114 ALA 114 114 114 ALA ALA D . n A 1 115 LEU 115 115 115 LEU LEU D . n A 1 116 LEU 116 116 116 LEU LEU D . n A 1 117 ALA 117 117 117 ALA ALA D . n A 1 118 SER 118 118 118 SER SER D . n A 1 119 PRO 119 119 119 PRO PRO D . n A 1 120 LEU 120 120 120 LEU LEU D . n A 1 121 LEU 121 121 121 LEU LEU D . n A 1 122 ILE 122 122 122 ILE ILE D . n A 1 123 ASP 123 123 123 ASP ASP D . n A 1 124 ALA 124 124 124 ALA ALA D . n A 1 125 ILE 125 125 125 ILE ILE D . n A 1 126 ASP 126 126 126 ASP ASP D . n A 1 127 GLN 127 127 127 GLN GLN D . n A 1 128 LEU 128 128 128 LEU LEU D . n A 1 129 ASN 129 129 129 ASN ASN D . n A 1 130 PRO 130 130 130 PRO PRO D . n A 1 131 ALA 131 131 131 ALA ALA D . n A 1 132 TYR 132 132 132 TYR TYR D . n A 1 133 ALA 133 133 133 ALA ALA D . n A 1 134 TYR 134 134 134 TYR TYR D . n A 1 135 GLY 135 135 135 GLY GLY D . n A 1 136 GLY 136 136 136 GLY GLY D . n A 1 137 ALA 137 137 137 ALA ALA D . n A 1 138 LYS 138 138 138 LYS LYS D . n A 1 139 LEU 139 139 139 LEU LEU D . n A 1 140 GLU 140 140 140 GLU GLU D . n A 1 141 THR 141 141 141 THR THR D . n A 1 142 VAL 142 142 142 VAL VAL D . n A 1 143 THR 143 143 143 THR THR D . n A 1 144 LEU 144 144 144 LEU LEU D . n A 1 145 GLY 145 145 145 GLY GLY D . n A 1 146 ASN 146 146 146 ASN ASN D . n A 1 147 ILE 147 147 147 ILE ILE D . n A 1 148 GLY 148 148 148 GLY GLY D . n A 1 149 LYS 149 149 149 LYS LYS D . n A 1 150 ASP 150 150 150 ASP ASP D . n A 1 151 GLY 151 151 151 GLY GLY D . n A 1 152 LYS 152 152 152 LYS LYS D . n A 1 153 GLN 153 153 153 GLN GLN D . n A 1 154 THR 154 154 154 THR THR D . n A 1 155 LEU 155 155 155 LEU LEU D . n A 1 156 VAL 156 156 156 VAL VAL D . n A 1 157 LEU 157 157 157 LEU LEU D . n A 1 158 ASN 158 158 158 ASN ASN D . n A 1 159 PRO 159 159 159 PRO PRO D . n A 1 160 ARG 160 160 160 ARG ARG D . n A 1 161 GLY 161 161 161 GLY GLY D . n A 1 162 VAL 162 162 162 VAL VAL D . n A 1 163 ASN 163 163 163 ASN ASN D . n A 1 164 PRO 164 164 164 PRO PRO D . n A 1 165 THR 165 165 165 THR THR D . n A 1 166 ASN 166 166 166 ASN ASN D . n A 1 167 GLY 167 167 167 GLY GLY D . n A 1 168 VAL 168 168 168 VAL VAL D . n A 1 169 ALA 169 169 169 ALA ALA D . n A 1 170 SER 170 170 170 SER SER D . n A 1 171 LEU 171 171 171 LEU LEU D . n A 1 172 SER 172 172 172 SER SER D . n A 1 173 GLN 173 173 173 GLN GLN D . n A 1 174 ALA 174 174 174 ALA ALA D . n A 1 175 GLY 175 175 175 GLY GLY D . n A 1 176 ALA 176 176 176 ALA ALA D . n A 1 177 VAL 177 177 177 VAL VAL D . n A 1 178 PRO 178 178 178 PRO PRO D . n A 1 179 ALA 179 179 179 ALA ALA D . n A 1 180 LEU 180 180 180 LEU LEU D . n A 1 181 GLU 181 181 181 GLU GLU D . n A 1 182 LYS 182 182 182 LYS LYS D . n A 1 183 ARG 183 183 183 ARG ARG D . n A 1 184 VAL 184 184 184 VAL VAL D . n A 1 185 THR 185 185 185 THR THR D . n A 1 186 VAL 186 186 186 VAL VAL D . n A 1 187 SER 187 187 187 SER SER D . n A 1 188 VAL 188 188 188 VAL VAL D . n A 1 189 SER 189 189 189 SER SER D . n A 1 190 GLN 190 190 190 GLN GLN D . n A 1 191 PRO 191 191 191 PRO PRO D . n A 1 192 SER 192 192 192 SER SER D . n A 1 193 ARG 193 193 193 ARG ARG D . n A 1 194 ASN 194 194 194 ASN ASN D . n A 1 195 ARG 195 195 195 ARG ARG D . n A 1 196 LYS 196 196 196 LYS LYS D . n A 1 197 ASN 197 197 197 ASN ASN D . n A 1 198 TYR 198 198 198 TYR TYR D . n A 1 199 LYS 199 199 199 LYS LYS D . n A 1 200 VAL 200 200 200 VAL VAL D . n A 1 201 GLN 201 201 201 GLN GLN D . n A 1 202 VAL 202 202 202 VAL VAL D . n A 1 203 LYS 203 203 203 LYS LYS D . n A 1 204 ILE 204 204 204 ILE ILE D . n A 1 205 GLN 205 205 205 GLN GLN D . n A 1 206 ASN 206 206 206 ASN ASN D . n A 1 207 PRO 207 207 207 PRO PRO D . n A 1 208 THR 208 208 208 THR THR D . n A 1 209 ALA 209 209 209 ALA ALA D . n A 1 210 CYS 210 210 210 CYS CYS D . n A 1 211 THR 211 211 211 THR THR D . n A 1 212 ALA 212 212 212 ALA ALA D . n A 1 213 ASN 213 213 213 ASN ASN D . n A 1 214 GLY 214 214 214 GLY GLY D . n A 1 215 SER 215 215 215 SER SER D . n A 1 216 CYS 216 216 216 CYS CYS D . n A 1 217 ASP 217 217 217 ASP ASP D . n A 1 218 PRO 218 218 218 PRO PRO D . n A 1 219 SER 219 219 219 SER SER D . n A 1 220 VAL 220 220 220 VAL VAL D . n A 1 221 THR 221 221 221 THR THR D . n A 1 222 ARG 222 222 222 ARG ARG D . n A 1 223 GLN 223 223 223 GLN GLN D . n A 1 224 ALA 224 224 224 ALA ALA D . n A 1 225 TYR 225 225 225 TYR TYR D . n A 1 226 ALA 226 226 226 ALA ALA D . n A 1 227 ASP 227 227 227 ASP ASP D . n A 1 228 VAL 228 228 228 VAL VAL D . n A 1 229 THR 229 229 229 THR THR D . n A 1 230 PHE 230 230 230 PHE PHE D . n A 1 231 SER 231 231 231 SER SER D . n A 1 232 PHE 232 232 232 PHE PHE D . n A 1 233 THR 233 233 233 THR THR D . n A 1 234 GLN 234 234 234 GLN GLN D . n A 1 235 TYR 235 235 235 TYR TYR D . n A 1 236 SER 236 236 236 SER SER D . n A 1 237 THR 237 237 237 THR THR D . n A 1 238 ASP 238 238 238 ASP ASP D . n A 1 239 GLU 239 239 239 GLU GLU D . n A 1 240 GLU 240 240 240 GLU GLU D . n A 1 241 ARG 241 241 241 ARG ARG D . n A 1 242 ALA 242 242 242 ALA ALA D . n A 1 243 PHE 243 243 243 PHE PHE D . n A 1 244 VAL 244 244 244 VAL VAL D . n A 1 245 ARG 245 245 245 ARG ARG D . n A 1 246 THR 246 246 246 THR THR D . n A 1 247 GLU 247 247 247 GLU GLU D . n A 1 248 LEU 248 248 248 LEU LEU D . n A 1 249 ALA 249 249 249 ALA ALA D . n A 1 250 ALA 250 250 250 ALA ALA D . n A 1 251 LEU 251 251 251 LEU LEU D . n A 1 252 LEU 252 252 252 LEU LEU D . n A 1 253 ALA 253 253 253 ALA ALA D . n A 1 254 SER 254 254 254 SER SER D . n A 1 255 PRO 255 255 255 PRO PRO D . n A 1 256 LEU 256 256 256 LEU LEU D . n A 1 257 LEU 257 257 257 LEU LEU D . n A 1 258 ILE 258 258 258 ILE ILE D . n A 1 259 ASP 259 259 259 ASP ASP D . n A 1 260 ALA 260 260 260 ALA ALA D . n A 1 261 ILE 261 261 261 ILE ILE D . n A 1 262 ASP 262 262 262 ASP ASP D . n A 1 263 GLN 263 263 263 GLN GLN D . n A 1 264 LEU 264 264 264 LEU LEU D . n A 1 265 ASN 265 265 265 ASN ASN D . n A 1 266 PRO 266 266 266 PRO PRO D . n A 1 267 ALA 267 267 267 ALA ALA D . n A 1 268 TYR 268 268 268 TYR TYR D . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email mkopylov@nysbc.org _pdbx_contact_author.name_first Mykhailo _pdbx_contact_author.name_last Kopylov _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-0188-9799 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_point_symmetry.entry_id 8FEH _pdbx_point_symmetry.Schoenflies_symbol I # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2023-12-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 8FEH _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_reconstruction.entry_id 8FEH _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm 'FOURIER SPACE' _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 3.28 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 1380 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages 1 _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7.5 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type VIRUS _em_entity_assembly.name 'Qubevirus durum' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list 1 # _em_image_scans.entry_id 8FEH _em_image_scans.id 1 _em_image_scans.number_digital_images ? _em_image_scans.details ? _em_image_scans.scanner_model ? _em_image_scans.sampling_size ? _em_image_scans.od_range ? _em_image_scans.quant_bit_size ? _em_image_scans.citation_id ? _em_image_scans.dimension_height 3710 _em_image_scans.dimension_width 3838 _em_image_scans.frames_per_image ? _em_image_scans.image_recording_id 1 _em_image_scans.used_frames_per_image ? # _em_imaging.entry_id 8FEH _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs 0.001 _em_imaging.nominal_defocus_min 1000 _em_imaging.nominal_defocus_max 2000 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter 100 _em_imaging.specimen_id 1 _em_imaging.cryogen ? # _em_virus_entity.id 1 _em_virus_entity.virus_host_category ? _em_virus_entity.virus_type 'VIRUS-LIKE PARTICLE' _em_virus_entity.virus_isolate OTHER _em_virus_entity.entity_assembly_id 1 _em_virus_entity.enveloped NO _em_virus_entity.empty YES _em_virus_entity.details ? # _em_vitrification.entry_id 8FEH _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity ? _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 8FEH _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # _em_single_particle_entity.entry_id 8FEH _em_single_particle_entity.id 1 _em_single_particle_entity.image_processing_id 1 _em_single_particle_entity.point_symmetry C1 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN D 10 ? ? 36.76 60.67 2 1 ALA D 40 ? ? 70.19 -5.20 3 1 ALA D 133 ? ? -162.95 116.96 4 1 ARG D 160 ? ? -92.77 59.53 5 1 ARG D 222 ? ? 70.05 -62.53 6 1 GLN D 223 ? ? 83.83 -8.55 7 1 TYR D 235 ? ? 75.65 -6.34 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 D ASN 77 ? CG ? A ASN 77 CG 2 1 Y 1 D ASN 77 ? OD1 ? A ASN 77 OD1 3 1 Y 1 D ASN 77 ? ND2 ? A ASN 77 ND2 4 1 Y 1 D TYR 132 ? CG ? A TYR 132 CG 5 1 Y 1 D TYR 132 ? CD1 ? A TYR 132 CD1 6 1 Y 1 D TYR 132 ? CD2 ? A TYR 132 CD2 7 1 Y 1 D TYR 132 ? CE1 ? A TYR 132 CE1 8 1 Y 1 D TYR 132 ? CE2 ? A TYR 132 CE2 9 1 Y 1 D TYR 132 ? CZ ? A TYR 132 CZ 10 1 Y 1 D TYR 132 ? OH ? A TYR 132 OH 11 1 Y 1 D TYR 134 ? CG ? A TYR 134 CG 12 1 Y 1 D TYR 134 ? CD1 ? A TYR 134 CD1 13 1 Y 1 D TYR 134 ? CD2 ? A TYR 134 CD2 14 1 Y 1 D TYR 134 ? CE1 ? A TYR 134 CE1 15 1 Y 1 D TYR 134 ? CE2 ? A TYR 134 CE2 16 1 Y 1 D TYR 134 ? CZ ? A TYR 134 CZ 17 1 Y 1 D TYR 134 ? OH ? A TYR 134 OH # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 ILE N N N N 137 ILE CA C N S 138 ILE C C N N 139 ILE O O N N 140 ILE CB C N S 141 ILE CG1 C N N 142 ILE CG2 C N N 143 ILE CD1 C N N 144 ILE OXT O N N 145 ILE H H N N 146 ILE H2 H N N 147 ILE HA H N N 148 ILE HB H N N 149 ILE HG12 H N N 150 ILE HG13 H N N 151 ILE HG21 H N N 152 ILE HG22 H N N 153 ILE HG23 H N N 154 ILE HD11 H N N 155 ILE HD12 H N N 156 ILE HD13 H N N 157 ILE HXT H N N 158 LEU N N N N 159 LEU CA C N S 160 LEU C C N N 161 LEU O O N N 162 LEU CB C N N 163 LEU CG C N N 164 LEU CD1 C N N 165 LEU CD2 C N N 166 LEU OXT O N N 167 LEU H H N N 168 LEU H2 H N N 169 LEU HA H N N 170 LEU HB2 H N N 171 LEU HB3 H N N 172 LEU HG H N N 173 LEU HD11 H N N 174 LEU HD12 H N N 175 LEU HD13 H N N 176 LEU HD21 H N N 177 LEU HD22 H N N 178 LEU HD23 H N N 179 LEU HXT H N N 180 LYS N N N N 181 LYS CA C N S 182 LYS C C N N 183 LYS O O N N 184 LYS CB C N N 185 LYS CG C N N 186 LYS CD C N N 187 LYS CE C N N 188 LYS NZ N N N 189 LYS OXT O N N 190 LYS H H N N 191 LYS H2 H N N 192 LYS HA H N N 193 LYS HB2 H N N 194 LYS HB3 H N N 195 LYS HG2 H N N 196 LYS HG3 H N N 197 LYS HD2 H N N 198 LYS HD3 H N N 199 LYS HE2 H N N 200 LYS HE3 H N N 201 LYS HZ1 H N N 202 LYS HZ2 H N N 203 LYS HZ3 H N N 204 LYS HXT H N N 205 PHE N N N N 206 PHE CA C N S 207 PHE C C N N 208 PHE O O N N 209 PHE CB C N N 210 PHE CG C Y N 211 PHE CD1 C Y N 212 PHE CD2 C Y N 213 PHE CE1 C Y N 214 PHE CE2 C Y N 215 PHE CZ C Y N 216 PHE OXT O N N 217 PHE H H N N 218 PHE H2 H N N 219 PHE HA H N N 220 PHE HB2 H N N 221 PHE HB3 H N N 222 PHE HD1 H N N 223 PHE HD2 H N N 224 PHE HE1 H N N 225 PHE HE2 H N N 226 PHE HZ H N N 227 PHE HXT H N N 228 PRO N N N N 229 PRO CA C N S 230 PRO C C N N 231 PRO O O N N 232 PRO CB C N N 233 PRO CG C N N 234 PRO CD C N N 235 PRO OXT O N N 236 PRO H H N N 237 PRO HA H N N 238 PRO HB2 H N N 239 PRO HB3 H N N 240 PRO HG2 H N N 241 PRO HG3 H N N 242 PRO HD2 H N N 243 PRO HD3 H N N 244 PRO HXT H N N 245 SER N N N N 246 SER CA C N S 247 SER C C N N 248 SER O O N N 249 SER CB C N N 250 SER OG O N N 251 SER OXT O N N 252 SER H H N N 253 SER H2 H N N 254 SER HA H N N 255 SER HB2 H N N 256 SER HB3 H N N 257 SER HG H N N 258 SER HXT H N N 259 THR N N N N 260 THR CA C N S 261 THR C C N N 262 THR O O N N 263 THR CB C N R 264 THR OG1 O N N 265 THR CG2 C N N 266 THR OXT O N N 267 THR H H N N 268 THR H2 H N N 269 THR HA H N N 270 THR HB H N N 271 THR HG1 H N N 272 THR HG21 H N N 273 THR HG22 H N N 274 THR HG23 H N N 275 THR HXT H N N 276 TYR N N N N 277 TYR CA C N S 278 TYR C C N N 279 TYR O O N N 280 TYR CB C N N 281 TYR CG C Y N 282 TYR CD1 C Y N 283 TYR CD2 C Y N 284 TYR CE1 C Y N 285 TYR CE2 C Y N 286 TYR CZ C Y N 287 TYR OH O N N 288 TYR OXT O N N 289 TYR H H N N 290 TYR H2 H N N 291 TYR HA H N N 292 TYR HB2 H N N 293 TYR HB3 H N N 294 TYR HD1 H N N 295 TYR HD2 H N N 296 TYR HE1 H N N 297 TYR HE2 H N N 298 TYR HH H N N 299 TYR HXT H N N 300 VAL N N N N 301 VAL CA C N S 302 VAL C C N N 303 VAL O O N N 304 VAL CB C N N 305 VAL CG1 C N N 306 VAL CG2 C N N 307 VAL OXT O N N 308 VAL H H N N 309 VAL H2 H N N 310 VAL HA H N N 311 VAL HB H N N 312 VAL HG11 H N N 313 VAL HG12 H N N 314 VAL HG13 H N N 315 VAL HG21 H N N 316 VAL HG22 H N N 317 VAL HG23 H N N 318 VAL HXT H N N 319 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 ILE N CA sing N N 129 ILE N H sing N N 130 ILE N H2 sing N N 131 ILE CA C sing N N 132 ILE CA CB sing N N 133 ILE CA HA sing N N 134 ILE C O doub N N 135 ILE C OXT sing N N 136 ILE CB CG1 sing N N 137 ILE CB CG2 sing N N 138 ILE CB HB sing N N 139 ILE CG1 CD1 sing N N 140 ILE CG1 HG12 sing N N 141 ILE CG1 HG13 sing N N 142 ILE CG2 HG21 sing N N 143 ILE CG2 HG22 sing N N 144 ILE CG2 HG23 sing N N 145 ILE CD1 HD11 sing N N 146 ILE CD1 HD12 sing N N 147 ILE CD1 HD13 sing N N 148 ILE OXT HXT sing N N 149 LEU N CA sing N N 150 LEU N H sing N N 151 LEU N H2 sing N N 152 LEU CA C sing N N 153 LEU CA CB sing N N 154 LEU CA HA sing N N 155 LEU C O doub N N 156 LEU C OXT sing N N 157 LEU CB CG sing N N 158 LEU CB HB2 sing N N 159 LEU CB HB3 sing N N 160 LEU CG CD1 sing N N 161 LEU CG CD2 sing N N 162 LEU CG HG sing N N 163 LEU CD1 HD11 sing N N 164 LEU CD1 HD12 sing N N 165 LEU CD1 HD13 sing N N 166 LEU CD2 HD21 sing N N 167 LEU CD2 HD22 sing N N 168 LEU CD2 HD23 sing N N 169 LEU OXT HXT sing N N 170 LYS N CA sing N N 171 LYS N H sing N N 172 LYS N H2 sing N N 173 LYS CA C sing N N 174 LYS CA CB sing N N 175 LYS CA HA sing N N 176 LYS C O doub N N 177 LYS C OXT sing N N 178 LYS CB CG sing N N 179 LYS CB HB2 sing N N 180 LYS CB HB3 sing N N 181 LYS CG CD sing N N 182 LYS CG HG2 sing N N 183 LYS CG HG3 sing N N 184 LYS CD CE sing N N 185 LYS CD HD2 sing N N 186 LYS CD HD3 sing N N 187 LYS CE NZ sing N N 188 LYS CE HE2 sing N N 189 LYS CE HE3 sing N N 190 LYS NZ HZ1 sing N N 191 LYS NZ HZ2 sing N N 192 LYS NZ HZ3 sing N N 193 LYS OXT HXT sing N N 194 PHE N CA sing N N 195 PHE N H sing N N 196 PHE N H2 sing N N 197 PHE CA C sing N N 198 PHE CA CB sing N N 199 PHE CA HA sing N N 200 PHE C O doub N N 201 PHE C OXT sing N N 202 PHE CB CG sing N N 203 PHE CB HB2 sing N N 204 PHE CB HB3 sing N N 205 PHE CG CD1 doub Y N 206 PHE CG CD2 sing Y N 207 PHE CD1 CE1 sing Y N 208 PHE CD1 HD1 sing N N 209 PHE CD2 CE2 doub Y N 210 PHE CD2 HD2 sing N N 211 PHE CE1 CZ doub Y N 212 PHE CE1 HE1 sing N N 213 PHE CE2 CZ sing Y N 214 PHE CE2 HE2 sing N N 215 PHE CZ HZ sing N N 216 PHE OXT HXT sing N N 217 PRO N CA sing N N 218 PRO N CD sing N N 219 PRO N H sing N N 220 PRO CA C sing N N 221 PRO CA CB sing N N 222 PRO CA HA sing N N 223 PRO C O doub N N 224 PRO C OXT sing N N 225 PRO CB CG sing N N 226 PRO CB HB2 sing N N 227 PRO CB HB3 sing N N 228 PRO CG CD sing N N 229 PRO CG HG2 sing N N 230 PRO CG HG3 sing N N 231 PRO CD HD2 sing N N 232 PRO CD HD3 sing N N 233 PRO OXT HXT sing N N 234 SER N CA sing N N 235 SER N H sing N N 236 SER N H2 sing N N 237 SER CA C sing N N 238 SER CA CB sing N N 239 SER CA HA sing N N 240 SER C O doub N N 241 SER C OXT sing N N 242 SER CB OG sing N N 243 SER CB HB2 sing N N 244 SER CB HB3 sing N N 245 SER OG HG sing N N 246 SER OXT HXT sing N N 247 THR N CA sing N N 248 THR N H sing N N 249 THR N H2 sing N N 250 THR CA C sing N N 251 THR CA CB sing N N 252 THR CA HA sing N N 253 THR C O doub N N 254 THR C OXT sing N N 255 THR CB OG1 sing N N 256 THR CB CG2 sing N N 257 THR CB HB sing N N 258 THR OG1 HG1 sing N N 259 THR CG2 HG21 sing N N 260 THR CG2 HG22 sing N N 261 THR CG2 HG23 sing N N 262 THR OXT HXT sing N N 263 TYR N CA sing N N 264 TYR N H sing N N 265 TYR N H2 sing N N 266 TYR CA C sing N N 267 TYR CA CB sing N N 268 TYR CA HA sing N N 269 TYR C O doub N N 270 TYR C OXT sing N N 271 TYR CB CG sing N N 272 TYR CB HB2 sing N N 273 TYR CB HB3 sing N N 274 TYR CG CD1 doub Y N 275 TYR CG CD2 sing Y N 276 TYR CD1 CE1 sing Y N 277 TYR CD1 HD1 sing N N 278 TYR CD2 CE2 doub Y N 279 TYR CD2 HD2 sing N N 280 TYR CE1 CZ doub Y N 281 TYR CE1 HE1 sing N N 282 TYR CE2 CZ sing Y N 283 TYR CE2 HE2 sing N N 284 TYR CZ OH sing N N 285 TYR OH HH sing N N 286 TYR OXT HXT sing N N 287 VAL N CA sing N N 288 VAL N H sing N N 289 VAL N H2 sing N N 290 VAL CA C sing N N 291 VAL CA CB sing N N 292 VAL CA HA sing N N 293 VAL C O doub N N 294 VAL C OXT sing N N 295 VAL CB CG1 sing N N 296 VAL CB CG2 sing N N 297 VAL CB HB sing N N 298 VAL CG1 HG11 sing N N 299 VAL CG1 HG12 sing N N 300 VAL CG1 HG13 sing N N 301 VAL CG2 HG21 sing N N 302 VAL CG2 HG22 sing N N 303 VAL CG2 HG23 sing N N 304 VAL OXT HXT sing N N 305 # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 39803 _em_entity_assembly_naturalsource.organism 'Qubevirus durum' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.ncbi_tax_id 562 _em_entity_assembly_recombinant.organism 'Escherichia coli' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 64.7 _em_image_recording.details ? _em_image_recording.detector_mode COUNTING _em_image_recording.film_or_detector_model 'GATAN K2 SUMMIT (4k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? ? ? 'IMAGE ACQUISITION' ? 2 ? ? 1 ? ? MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? ? ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? ? ? ? ? 'MODEL REFINEMENT' ? 8 ? ? ? ? ? OTHER ? 9 ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? ? ? CLASSIFICATION ? 12 1 ? ? ? ? RECONSTRUCTION ? 13 1 ? ? ? ? 'VOLUME SELECTION' ? 14 1 1 1 ? ? 'SERIES ALIGNMENT' ? 15 1 1 1 ? ? 'MOLECULAR REPLACEMENT' ? 16 1 1 1 ? ? 'LATTICE DISTORTION CORRECTION' ? 17 1 1 1 ? ? 'SYMMETRY DETERMINATION' ? 18 1 1 1 ? ? 'CRYSTALLOGRAPHY MERGING' ? 19 1 1 1 ? ? # _em_specimen.concentration 1 _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'Simons Foundation' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number SF349247 _pdbx_audit_support.ordinal 1 # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #