data_8FIM # _entry.id 8FIM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.396 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8FIM pdb_00008fim 10.2210/pdb8fim/pdb WWPDB D_1000268775 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2023-09-06 2 'Structure model' 1 1 2024-09-18 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 2 'Structure model' '_citation.pdbx_database_id_DOI' 9 2 'Structure model' '_citation.pdbx_database_id_PubMed' 10 2 'Structure model' '_citation.title' 11 2 'Structure model' '_citation.year' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8FIM _pdbx_database_status.recvd_initial_deposition_date 2022-12-16 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _pdbx_contact_author.id _pdbx_contact_author.email _pdbx_contact_author.name_first _pdbx_contact_author.name_last _pdbx_contact_author.name_mi _pdbx_contact_author.role _pdbx_contact_author.identifier_ORCID 4 G.B.Jameson@massey.ac.nz Geoffrey Jameson B 'principal investigator/group leader' 0000-0003-4839-0784 5 V.Filichev@massey.ac.nz Vyacheslav Filichev V 'principal investigator/group leader' 0000-0002-7383-3025 6 e.harjes@massey.ac.nz Elena Harjes ? 'principal investigator/group leader' 0000-0002-3643-9432 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Harjes, S.' 1 0000-0001-6571-9057 'Jameson, G.B.' 2 0000-0003-4839-0784 'Harjes, E.' 3 0000-0002-3643-9432 'Filichev, V.V.' 4 0000-0002-7383-3025 'Kurup, H.M.' 5 0000-0001-5517-9907 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 14 _citation.language ? _citation.page_first 6382 _citation.page_last 6382 _citation.title 'Structure-guided inhibition of the cancer DNA-mutating enzyme APOBEC3A.' _citation.year 2023 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-023-42174-w _citation.pdbx_database_id_PubMed 37821454 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Harjes, S.' 1 ? primary 'Kurup, H.M.' 2 0000-0001-5517-9907 primary 'Rieffer, A.E.' 3 ? primary 'Bayarjargal, M.' 4 0000-0001-9235-9149 primary 'Filitcheva, J.' 5 ? primary 'Su, Y.' 6 0000-0002-2092-8872 primary 'Hale, T.K.' 7 0000-0002-9483-4588 primary 'Filichev, V.V.' 8 0000-0002-7383-3025 primary 'Harjes, E.' 9 0000-0002-3643-9432 primary 'Harris, R.S.' 10 0000-0002-9034-9112 primary 'Jameson, G.B.' 11 0000-0003-4839-0784 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA dC->dU-editing enzyme APOBEC-3A' 22982.979 2 3.5.4.38 E72A ? ? 2 polymer syn ;DNA (5'-D(*TP*GP*CP*GP*CP*TP*TP*CP*GP*CP*GP*CP*T)-3') ; 3934.546 2 ? ? ? ? 3 non-polymer syn 'INOSITOL HEXAKISPHOSPHATE' 660.035 2 ? ? ? ? 4 non-polymer syn 'ZINC ION' 65.409 2 ? ? ? ? 5 non-polymer syn 'CHLORIDE ION' 35.453 2 ? ? ? ? 6 non-polymer syn 'PHOSPHATE ION' 94.971 1 ? ? ? ? 7 water nat water 18.015 16 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name A3A,Phorbolin-1 # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MEASPASGPRHLMDPHIFTSNFNNGIGRHKTYLCYEVERLDNGTSVKMDQHRGFLHNQAKNLLCGFYGRHAALRFLDLVP SLQLDPAQIYRVTWFISWSPCFSWGCAGEVRAFLQENTHVRLRIFAARIYDYDPLYKEALQMLRDAGAQVSIMTYDEFKH CWDTFVDHQGCPFQPWDGLDEHSQALSGRLRAILQNQGN ; ;MEASPASGPRHLMDPHIFTSNFNNGIGRHKTYLCYEVERLDNGTSVKMDQHRGFLHNQAKNLLCGFYGRHAALRFLDLVP SLQLDPAQIYRVTWFISWSPCFSWGCAGEVRAFLQENTHVRLRIFAARIYDYDPLYKEALQMLRDAGAQVSIMTYDEFKH CWDTFVDHQGCPFQPWDGLDEHSQALSGRLRAILQNQGN ; A,B ? 2 polydeoxyribonucleotide no no '(DT)(DG)(DC)(DG)(DC)(DT)(DT)(DC)(DG)(DC)(DG)(DC)(DT)' TGCGCTTCGCGCT H,C ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'INOSITOL HEXAKISPHOSPHATE' IHP 4 'ZINC ION' ZN 5 'CHLORIDE ION' CL 6 'PHOSPHATE ION' PO4 7 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLU n 1 3 ALA n 1 4 SER n 1 5 PRO n 1 6 ALA n 1 7 SER n 1 8 GLY n 1 9 PRO n 1 10 ARG n 1 11 HIS n 1 12 LEU n 1 13 MET n 1 14 ASP n 1 15 PRO n 1 16 HIS n 1 17 ILE n 1 18 PHE n 1 19 THR n 1 20 SER n 1 21 ASN n 1 22 PHE n 1 23 ASN n 1 24 ASN n 1 25 GLY n 1 26 ILE n 1 27 GLY n 1 28 ARG n 1 29 HIS n 1 30 LYS n 1 31 THR n 1 32 TYR n 1 33 LEU n 1 34 CYS n 1 35 TYR n 1 36 GLU n 1 37 VAL n 1 38 GLU n 1 39 ARG n 1 40 LEU n 1 41 ASP n 1 42 ASN n 1 43 GLY n 1 44 THR n 1 45 SER n 1 46 VAL n 1 47 LYS n 1 48 MET n 1 49 ASP n 1 50 GLN n 1 51 HIS n 1 52 ARG n 1 53 GLY n 1 54 PHE n 1 55 LEU n 1 56 HIS n 1 57 ASN n 1 58 GLN n 1 59 ALA n 1 60 LYS n 1 61 ASN n 1 62 LEU n 1 63 LEU n 1 64 CYS n 1 65 GLY n 1 66 PHE n 1 67 TYR n 1 68 GLY n 1 69 ARG n 1 70 HIS n 1 71 ALA n 1 72 ALA n 1 73 LEU n 1 74 ARG n 1 75 PHE n 1 76 LEU n 1 77 ASP n 1 78 LEU n 1 79 VAL n 1 80 PRO n 1 81 SER n 1 82 LEU n 1 83 GLN n 1 84 LEU n 1 85 ASP n 1 86 PRO n 1 87 ALA n 1 88 GLN n 1 89 ILE n 1 90 TYR n 1 91 ARG n 1 92 VAL n 1 93 THR n 1 94 TRP n 1 95 PHE n 1 96 ILE n 1 97 SER n 1 98 TRP n 1 99 SER n 1 100 PRO n 1 101 CYS n 1 102 PHE n 1 103 SER n 1 104 TRP n 1 105 GLY n 1 106 CYS n 1 107 ALA n 1 108 GLY n 1 109 GLU n 1 110 VAL n 1 111 ARG n 1 112 ALA n 1 113 PHE n 1 114 LEU n 1 115 GLN n 1 116 GLU n 1 117 ASN n 1 118 THR n 1 119 HIS n 1 120 VAL n 1 121 ARG n 1 122 LEU n 1 123 ARG n 1 124 ILE n 1 125 PHE n 1 126 ALA n 1 127 ALA n 1 128 ARG n 1 129 ILE n 1 130 TYR n 1 131 ASP n 1 132 TYR n 1 133 ASP n 1 134 PRO n 1 135 LEU n 1 136 TYR n 1 137 LYS n 1 138 GLU n 1 139 ALA n 1 140 LEU n 1 141 GLN n 1 142 MET n 1 143 LEU n 1 144 ARG n 1 145 ASP n 1 146 ALA n 1 147 GLY n 1 148 ALA n 1 149 GLN n 1 150 VAL n 1 151 SER n 1 152 ILE n 1 153 MET n 1 154 THR n 1 155 TYR n 1 156 ASP n 1 157 GLU n 1 158 PHE n 1 159 LYS n 1 160 HIS n 1 161 CYS n 1 162 TRP n 1 163 ASP n 1 164 THR n 1 165 PHE n 1 166 VAL n 1 167 ASP n 1 168 HIS n 1 169 GLN n 1 170 GLY n 1 171 CYS n 1 172 PRO n 1 173 PHE n 1 174 GLN n 1 175 PRO n 1 176 TRP n 1 177 ASP n 1 178 GLY n 1 179 LEU n 1 180 ASP n 1 181 GLU n 1 182 HIS n 1 183 SER n 1 184 GLN n 1 185 ALA n 1 186 LEU n 1 187 SER n 1 188 GLY n 1 189 ARG n 1 190 LEU n 1 191 ARG n 1 192 ALA n 1 193 ILE n 1 194 LEU n 1 195 GLN n 1 196 ASN n 1 197 GLN n 1 198 GLY n 1 199 ASN n 2 1 DT n 2 2 DG n 2 3 DC n 2 4 DG n 2 5 DC n 2 6 DT n 2 7 DT n 2 8 DC n 2 9 DG n 2 10 DC n 2 11 DG n 2 12 DC n 2 13 DT n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 199 _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene APOBEC3A _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pETite _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 13 _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 IHP non-polymer . 'INOSITOL HEXAKISPHOSPHATE' 'MYO-INOSITOL HEXAKISPHOSPHATE; INOSITOL 1,2,3,4,5,6-HEXAKISPHOSPHATE' 'C6 H18 O24 P6' 660.035 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 GLU 2 2 ? ? ? A . n A 1 3 ALA 3 3 ? ? ? A . n A 1 4 SER 4 4 ? ? ? A . n A 1 5 PRO 5 5 ? ? ? A . n A 1 6 ALA 6 6 ? ? ? A . n A 1 7 SER 7 7 ? ? ? A . n A 1 8 GLY 8 8 ? ? ? A . n A 1 9 PRO 9 9 ? ? ? A . n A 1 10 ARG 10 10 10 ARG ARG A . n A 1 11 HIS 11 11 11 HIS HIS A . n A 1 12 LEU 12 12 12 LEU LEU A . n A 1 13 MET 13 13 13 MET MET A . n A 1 14 ASP 14 14 14 ASP ASP A . n A 1 15 PRO 15 15 15 PRO PRO A . n A 1 16 HIS 16 16 16 HIS HIS A . n A 1 17 ILE 17 17 17 ILE ILE A . n A 1 18 PHE 18 18 18 PHE PHE A . n A 1 19 THR 19 19 19 THR THR A . n A 1 20 SER 20 20 20 SER SER A . n A 1 21 ASN 21 21 21 ASN ASN A . n A 1 22 PHE 22 22 22 PHE PHE A . n A 1 23 ASN 23 23 23 ASN ASN A . n A 1 24 ASN 24 24 24 ASN ASN A . n A 1 25 GLY 25 25 25 GLY GLY A . n A 1 26 ILE 26 26 26 ILE ILE A . n A 1 27 GLY 27 27 27 GLY GLY A . n A 1 28 ARG 28 28 28 ARG ARG A . n A 1 29 HIS 29 29 29 HIS HIS A . n A 1 30 LYS 30 30 30 LYS LYS A . n A 1 31 THR 31 31 31 THR THR A . n A 1 32 TYR 32 32 32 TYR TYR A . n A 1 33 LEU 33 33 33 LEU LEU A . n A 1 34 CYS 34 34 34 CYS CYS A . n A 1 35 TYR 35 35 35 TYR TYR A . n A 1 36 GLU 36 36 36 GLU GLU A . n A 1 37 VAL 37 37 37 VAL VAL A . n A 1 38 GLU 38 38 38 GLU GLU A . n A 1 39 ARG 39 39 39 ARG ARG A . n A 1 40 LEU 40 40 40 LEU LEU A . n A 1 41 ASP 41 41 41 ASP ASP A . n A 1 42 ASN 42 42 42 ASN ASN A . n A 1 43 GLY 43 43 43 GLY GLY A . n A 1 44 THR 44 44 44 THR THR A . n A 1 45 SER 45 45 45 SER SER A . n A 1 46 VAL 46 46 46 VAL VAL A . n A 1 47 LYS 47 47 47 LYS LYS A . n A 1 48 MET 48 48 48 MET MET A . n A 1 49 ASP 49 49 49 ASP ASP A . n A 1 50 GLN 50 50 50 GLN GLN A . n A 1 51 HIS 51 51 51 HIS HIS A . n A 1 52 ARG 52 52 52 ARG ARG A . n A 1 53 GLY 53 53 53 GLY GLY A . n A 1 54 PHE 54 54 54 PHE PHE A . n A 1 55 LEU 55 55 55 LEU LEU A . n A 1 56 HIS 56 56 56 HIS HIS A . n A 1 57 ASN 57 57 57 ASN ASN A . n A 1 58 GLN 58 58 58 GLN GLN A . n A 1 59 ALA 59 59 59 ALA ALA A . n A 1 60 LYS 60 60 60 LYS LYS A . n A 1 61 ASN 61 61 61 ASN ASN A . n A 1 62 LEU 62 62 62 LEU LEU A . n A 1 63 LEU 63 63 63 LEU LEU A . n A 1 64 CYS 64 64 64 CYS CYS A . n A 1 65 GLY 65 65 65 GLY GLY A . n A 1 66 PHE 66 66 66 PHE PHE A . n A 1 67 TYR 67 67 67 TYR TYR A . n A 1 68 GLY 68 68 68 GLY GLY A . n A 1 69 ARG 69 69 69 ARG ARG A . n A 1 70 HIS 70 70 70 HIS HIS A . n A 1 71 ALA 71 71 71 ALA ALA A . n A 1 72 ALA 72 72 72 ALA ALA A . n A 1 73 LEU 73 73 73 LEU LEU A . n A 1 74 ARG 74 74 74 ARG ARG A . n A 1 75 PHE 75 75 75 PHE PHE A . n A 1 76 LEU 76 76 76 LEU LEU A . n A 1 77 ASP 77 77 77 ASP ASP A . n A 1 78 LEU 78 78 78 LEU LEU A . n A 1 79 VAL 79 79 79 VAL VAL A . n A 1 80 PRO 80 80 80 PRO PRO A . n A 1 81 SER 81 81 81 SER SER A . n A 1 82 LEU 82 82 82 LEU LEU A . n A 1 83 GLN 83 83 83 GLN GLN A . n A 1 84 LEU 84 84 84 LEU LEU A . n A 1 85 ASP 85 85 85 ASP ASP A . n A 1 86 PRO 86 86 86 PRO PRO A . n A 1 87 ALA 87 87 87 ALA ALA A . n A 1 88 GLN 88 88 88 GLN GLN A . n A 1 89 ILE 89 89 89 ILE ILE A . n A 1 90 TYR 90 90 90 TYR TYR A . n A 1 91 ARG 91 91 91 ARG ARG A . n A 1 92 VAL 92 92 92 VAL VAL A . n A 1 93 THR 93 93 93 THR THR A . n A 1 94 TRP 94 94 94 TRP TRP A . n A 1 95 PHE 95 95 95 PHE PHE A . n A 1 96 ILE 96 96 96 ILE ILE A . n A 1 97 SER 97 97 97 SER SER A . n A 1 98 TRP 98 98 98 TRP TRP A . n A 1 99 SER 99 99 99 SER SER A . n A 1 100 PRO 100 100 100 PRO PRO A . n A 1 101 CYS 101 101 101 CYS CYS A . n A 1 102 PHE 102 102 102 PHE PHE A . n A 1 103 SER 103 103 103 SER SER A . n A 1 104 TRP 104 104 104 TRP TRP A . n A 1 105 GLY 105 105 105 GLY GLY A . n A 1 106 CYS 106 106 106 CYS CYS A . n A 1 107 ALA 107 107 107 ALA ALA A . n A 1 108 GLY 108 108 108 GLY GLY A . n A 1 109 GLU 109 109 109 GLU GLU A . n A 1 110 VAL 110 110 110 VAL VAL A . n A 1 111 ARG 111 111 111 ARG ARG A . n A 1 112 ALA 112 112 112 ALA ALA A . n A 1 113 PHE 113 113 113 PHE PHE A . n A 1 114 LEU 114 114 114 LEU LEU A . n A 1 115 GLN 115 115 115 GLN GLN A . n A 1 116 GLU 116 116 116 GLU GLU A . n A 1 117 ASN 117 117 117 ASN ASN A . n A 1 118 THR 118 118 118 THR THR A . n A 1 119 HIS 119 119 119 HIS HIS A . n A 1 120 VAL 120 120 120 VAL VAL A . n A 1 121 ARG 121 121 121 ARG ARG A . n A 1 122 LEU 122 122 122 LEU LEU A . n A 1 123 ARG 123 123 123 ARG ARG A . n A 1 124 ILE 124 124 124 ILE ILE A . n A 1 125 PHE 125 125 125 PHE PHE A . n A 1 126 ALA 126 126 126 ALA ALA A . n A 1 127 ALA 127 127 127 ALA ALA A . n A 1 128 ARG 128 128 128 ARG ARG A . n A 1 129 ILE 129 129 129 ILE ILE A . n A 1 130 TYR 130 130 130 TYR TYR A . n A 1 131 ASP 131 131 131 ASP ASP A . n A 1 132 TYR 132 132 132 TYR TYR A . n A 1 133 ASP 133 133 133 ASP ASP A . n A 1 134 PRO 134 134 134 PRO PRO A . n A 1 135 LEU 135 135 135 LEU LEU A . n A 1 136 TYR 136 136 136 TYR TYR A . n A 1 137 LYS 137 137 137 LYS LYS A . n A 1 138 GLU 138 138 138 GLU GLU A . n A 1 139 ALA 139 139 139 ALA ALA A . n A 1 140 LEU 140 140 140 LEU LEU A . n A 1 141 GLN 141 141 141 GLN GLN A . n A 1 142 MET 142 142 142 MET MET A . n A 1 143 LEU 143 143 143 LEU LEU A . n A 1 144 ARG 144 144 144 ARG ARG A . n A 1 145 ASP 145 145 145 ASP ASP A . n A 1 146 ALA 146 146 146 ALA ALA A . n A 1 147 GLY 147 147 147 GLY GLY A . n A 1 148 ALA 148 148 148 ALA ALA A . n A 1 149 GLN 149 149 149 GLN GLN A . n A 1 150 VAL 150 150 150 VAL VAL A . n A 1 151 SER 151 151 151 SER SER A . n A 1 152 ILE 152 152 152 ILE ILE A . n A 1 153 MET 153 153 153 MET MET A . n A 1 154 THR 154 154 154 THR THR A . n A 1 155 TYR 155 155 155 TYR TYR A . n A 1 156 ASP 156 156 156 ASP ASP A . n A 1 157 GLU 157 157 157 GLU GLU A . n A 1 158 PHE 158 158 158 PHE PHE A . n A 1 159 LYS 159 159 159 LYS LYS A . n A 1 160 HIS 160 160 160 HIS HIS A . n A 1 161 CYS 161 161 161 CYS CYS A . n A 1 162 TRP 162 162 162 TRP TRP A . n A 1 163 ASP 163 163 163 ASP ASP A . n A 1 164 THR 164 164 164 THR THR A . n A 1 165 PHE 165 165 165 PHE PHE A . n A 1 166 VAL 166 166 166 VAL VAL A . n A 1 167 ASP 167 167 167 ASP ASP A . n A 1 168 HIS 168 168 168 HIS HIS A . n A 1 169 GLN 169 169 169 GLN GLN A . n A 1 170 GLY 170 170 170 GLY GLY A . n A 1 171 CYS 171 171 171 CYS CYS A . n A 1 172 PRO 172 172 172 PRO PRO A . n A 1 173 PHE 173 173 173 PHE PHE A . n A 1 174 GLN 174 174 174 GLN GLN A . n A 1 175 PRO 175 175 175 PRO PRO A . n A 1 176 TRP 176 176 176 TRP TRP A . n A 1 177 ASP 177 177 177 ASP ASP A . n A 1 178 GLY 178 178 178 GLY GLY A . n A 1 179 LEU 179 179 179 LEU LEU A . n A 1 180 ASP 180 180 180 ASP ASP A . n A 1 181 GLU 181 181 181 GLU GLU A . n A 1 182 HIS 182 182 182 HIS HIS A . n A 1 183 SER 183 183 183 SER SER A . n A 1 184 GLN 184 184 184 GLN GLN A . n A 1 185 ALA 185 185 185 ALA ALA A . n A 1 186 LEU 186 186 186 LEU LEU A . n A 1 187 SER 187 187 187 SER SER A . n A 1 188 GLY 188 188 188 GLY GLY A . n A 1 189 ARG 189 189 189 ARG ARG A . n A 1 190 LEU 190 190 190 LEU LEU A . n A 1 191 ARG 191 191 191 ARG ARG A . n A 1 192 ALA 192 192 192 ALA ALA A . n A 1 193 ILE 193 193 193 ILE ILE A . n A 1 194 LEU 194 194 194 LEU LEU A . n A 1 195 GLN 195 195 195 GLN GLN A . n A 1 196 ASN 196 196 196 ASN ASN A . n A 1 197 GLN 197 197 ? ? ? A . n A 1 198 GLY 198 198 ? ? ? A . n A 1 199 ASN 199 199 ? ? ? A . n B 1 1 MET 1 1 ? ? ? B . n B 1 2 GLU 2 2 ? ? ? B . n B 1 3 ALA 3 3 ? ? ? B . n B 1 4 SER 4 4 ? ? ? B . n B 1 5 PRO 5 5 ? ? ? B . n B 1 6 ALA 6 6 ? ? ? B . n B 1 7 SER 7 7 ? ? ? B . n B 1 8 GLY 8 8 ? ? ? B . n B 1 9 PRO 9 9 ? ? ? B . n B 1 10 ARG 10 10 10 ARG ARG B . n B 1 11 HIS 11 11 11 HIS HIS B . n B 1 12 LEU 12 12 12 LEU LEU B . n B 1 13 MET 13 13 13 MET MET B . n B 1 14 ASP 14 14 14 ASP ASP B . n B 1 15 PRO 15 15 15 PRO PRO B . n B 1 16 HIS 16 16 16 HIS HIS B . n B 1 17 ILE 17 17 17 ILE ILE B . n B 1 18 PHE 18 18 18 PHE PHE B . n B 1 19 THR 19 19 19 THR THR B . n B 1 20 SER 20 20 20 SER SER B . n B 1 21 ASN 21 21 21 ASN ASN B . n B 1 22 PHE 22 22 22 PHE PHE B . n B 1 23 ASN 23 23 23 ASN ASN B . n B 1 24 ASN 24 24 24 ASN ASN B . n B 1 25 GLY 25 25 25 GLY GLY B . n B 1 26 ILE 26 26 26 ILE ILE B . n B 1 27 GLY 27 27 27 GLY GLY B . n B 1 28 ARG 28 28 28 ARG ARG B . n B 1 29 HIS 29 29 29 HIS HIS B . n B 1 30 LYS 30 30 30 LYS LYS B . n B 1 31 THR 31 31 31 THR THR B . n B 1 32 TYR 32 32 32 TYR TYR B . n B 1 33 LEU 33 33 33 LEU LEU B . n B 1 34 CYS 34 34 34 CYS CYS B . n B 1 35 TYR 35 35 35 TYR TYR B . n B 1 36 GLU 36 36 36 GLU GLU B . n B 1 37 VAL 37 37 37 VAL VAL B . n B 1 38 GLU 38 38 38 GLU GLU B . n B 1 39 ARG 39 39 39 ARG ARG B . n B 1 40 LEU 40 40 40 LEU LEU B . n B 1 41 ASP 41 41 41 ASP ASP B . n B 1 42 ASN 42 42 42 ASN ASN B . n B 1 43 GLY 43 43 43 GLY GLY B . n B 1 44 THR 44 44 44 THR THR B . n B 1 45 SER 45 45 45 SER SER B . n B 1 46 VAL 46 46 46 VAL VAL B . n B 1 47 LYS 47 47 47 LYS LYS B . n B 1 48 MET 48 48 48 MET MET B . n B 1 49 ASP 49 49 49 ASP ASP B . n B 1 50 GLN 50 50 50 GLN GLN B . n B 1 51 HIS 51 51 51 HIS HIS B . n B 1 52 ARG 52 52 52 ARG ARG B . n B 1 53 GLY 53 53 53 GLY GLY B . n B 1 54 PHE 54 54 54 PHE PHE B . n B 1 55 LEU 55 55 55 LEU LEU B . n B 1 56 HIS 56 56 56 HIS HIS B . n B 1 57 ASN 57 57 57 ASN ASN B . n B 1 58 GLN 58 58 58 GLN GLN B . n B 1 59 ALA 59 59 59 ALA ALA B . n B 1 60 LYS 60 60 60 LYS LYS B . n B 1 61 ASN 61 61 61 ASN ASN B . n B 1 62 LEU 62 62 62 LEU LEU B . n B 1 63 LEU 63 63 63 LEU LEU B . n B 1 64 CYS 64 64 64 CYS CYS B . n B 1 65 GLY 65 65 65 GLY GLY B . n B 1 66 PHE 66 66 66 PHE PHE B . n B 1 67 TYR 67 67 67 TYR TYR B . n B 1 68 GLY 68 68 68 GLY GLY B . n B 1 69 ARG 69 69 69 ARG ARG B . n B 1 70 HIS 70 70 70 HIS HIS B . n B 1 71 ALA 71 71 71 ALA ALA B . n B 1 72 ALA 72 72 72 ALA ALA B . n B 1 73 LEU 73 73 73 LEU LEU B . n B 1 74 ARG 74 74 74 ARG ARG B . n B 1 75 PHE 75 75 75 PHE PHE B . n B 1 76 LEU 76 76 76 LEU LEU B . n B 1 77 ASP 77 77 77 ASP ASP B . n B 1 78 LEU 78 78 78 LEU LEU B . n B 1 79 VAL 79 79 79 VAL VAL B . n B 1 80 PRO 80 80 80 PRO PRO B . n B 1 81 SER 81 81 81 SER SER B . n B 1 82 LEU 82 82 82 LEU LEU B . n B 1 83 GLN 83 83 83 GLN GLN B . n B 1 84 LEU 84 84 84 LEU LEU B . n B 1 85 ASP 85 85 85 ASP ASP B . n B 1 86 PRO 86 86 86 PRO PRO B . n B 1 87 ALA 87 87 87 ALA ALA B . n B 1 88 GLN 88 88 88 GLN GLN B . n B 1 89 ILE 89 89 89 ILE ILE B . n B 1 90 TYR 90 90 90 TYR TYR B . n B 1 91 ARG 91 91 91 ARG ARG B . n B 1 92 VAL 92 92 92 VAL VAL B . n B 1 93 THR 93 93 93 THR THR B . n B 1 94 TRP 94 94 94 TRP TRP B . n B 1 95 PHE 95 95 95 PHE PHE B . n B 1 96 ILE 96 96 96 ILE ILE B . n B 1 97 SER 97 97 97 SER SER B . n B 1 98 TRP 98 98 98 TRP TRP B . n B 1 99 SER 99 99 99 SER SER B . n B 1 100 PRO 100 100 100 PRO PRO B . n B 1 101 CYS 101 101 101 CYS CYS B . n B 1 102 PHE 102 102 102 PHE PHE B . n B 1 103 SER 103 103 103 SER SER B . n B 1 104 TRP 104 104 104 TRP TRP B . n B 1 105 GLY 105 105 105 GLY GLY B . n B 1 106 CYS 106 106 106 CYS CYS B . n B 1 107 ALA 107 107 107 ALA ALA B . n B 1 108 GLY 108 108 108 GLY GLY B . n B 1 109 GLU 109 109 109 GLU GLU B . n B 1 110 VAL 110 110 110 VAL VAL B . n B 1 111 ARG 111 111 111 ARG ARG B . n B 1 112 ALA 112 112 112 ALA ALA B . n B 1 113 PHE 113 113 113 PHE PHE B . n B 1 114 LEU 114 114 114 LEU LEU B . n B 1 115 GLN 115 115 115 GLN GLN B . n B 1 116 GLU 116 116 116 GLU GLU B . n B 1 117 ASN 117 117 117 ASN ASN B . n B 1 118 THR 118 118 118 THR THR B . n B 1 119 HIS 119 119 119 HIS HIS B . n B 1 120 VAL 120 120 120 VAL VAL B . n B 1 121 ARG 121 121 121 ARG ARG B . n B 1 122 LEU 122 122 122 LEU LEU B . n B 1 123 ARG 123 123 123 ARG ARG B . n B 1 124 ILE 124 124 124 ILE ILE B . n B 1 125 PHE 125 125 125 PHE PHE B . n B 1 126 ALA 126 126 126 ALA ALA B . n B 1 127 ALA 127 127 127 ALA ALA B . n B 1 128 ARG 128 128 128 ARG ARG B . n B 1 129 ILE 129 129 129 ILE ILE B . n B 1 130 TYR 130 130 130 TYR TYR B . n B 1 131 ASP 131 131 131 ASP ASP B . n B 1 132 TYR 132 132 132 TYR TYR B . n B 1 133 ASP 133 133 133 ASP ASP B . n B 1 134 PRO 134 134 134 PRO PRO B . n B 1 135 LEU 135 135 135 LEU LEU B . n B 1 136 TYR 136 136 136 TYR TYR B . n B 1 137 LYS 137 137 137 LYS LYS B . n B 1 138 GLU 138 138 138 GLU GLU B . n B 1 139 ALA 139 139 139 ALA ALA B . n B 1 140 LEU 140 140 140 LEU LEU B . n B 1 141 GLN 141 141 141 GLN GLN B . n B 1 142 MET 142 142 142 MET MET B . n B 1 143 LEU 143 143 143 LEU LEU B . n B 1 144 ARG 144 144 144 ARG ARG B . n B 1 145 ASP 145 145 145 ASP ASP B . n B 1 146 ALA 146 146 146 ALA ALA B . n B 1 147 GLY 147 147 147 GLY GLY B . n B 1 148 ALA 148 148 148 ALA ALA B . n B 1 149 GLN 149 149 149 GLN GLN B . n B 1 150 VAL 150 150 150 VAL VAL B . n B 1 151 SER 151 151 151 SER SER B . n B 1 152 ILE 152 152 152 ILE ILE B . n B 1 153 MET 153 153 153 MET MET B . n B 1 154 THR 154 154 154 THR THR B . n B 1 155 TYR 155 155 155 TYR TYR B . n B 1 156 ASP 156 156 156 ASP ASP B . n B 1 157 GLU 157 157 157 GLU GLU B . n B 1 158 PHE 158 158 158 PHE PHE B . n B 1 159 LYS 159 159 159 LYS LYS B . n B 1 160 HIS 160 160 160 HIS HIS B . n B 1 161 CYS 161 161 161 CYS CYS B . n B 1 162 TRP 162 162 162 TRP TRP B . n B 1 163 ASP 163 163 163 ASP ASP B . n B 1 164 THR 164 164 164 THR THR B . n B 1 165 PHE 165 165 165 PHE PHE B . n B 1 166 VAL 166 166 166 VAL VAL B . n B 1 167 ASP 167 167 167 ASP ASP B . n B 1 168 HIS 168 168 168 HIS HIS B . n B 1 169 GLN 169 169 169 GLN GLN B . n B 1 170 GLY 170 170 170 GLY GLY B . n B 1 171 CYS 171 171 171 CYS CYS B . n B 1 172 PRO 172 172 172 PRO PRO B . n B 1 173 PHE 173 173 173 PHE PHE B . n B 1 174 GLN 174 174 174 GLN GLN B . n B 1 175 PRO 175 175 175 PRO PRO B . n B 1 176 TRP 176 176 176 TRP TRP B . n B 1 177 ASP 177 177 177 ASP ASP B . n B 1 178 GLY 178 178 178 GLY GLY B . n B 1 179 LEU 179 179 179 LEU LEU B . n B 1 180 ASP 180 180 180 ASP ASP B . n B 1 181 GLU 181 181 181 GLU GLU B . n B 1 182 HIS 182 182 182 HIS HIS B . n B 1 183 SER 183 183 183 SER SER B . n B 1 184 GLN 184 184 184 GLN GLN B . n B 1 185 ALA 185 185 185 ALA ALA B . n B 1 186 LEU 186 186 186 LEU LEU B . n B 1 187 SER 187 187 187 SER SER B . n B 1 188 GLY 188 188 188 GLY GLY B . n B 1 189 ARG 189 189 189 ARG ARG B . n B 1 190 LEU 190 190 190 LEU LEU B . n B 1 191 ARG 191 191 191 ARG ARG B . n B 1 192 ALA 192 192 192 ALA ALA B . n B 1 193 ILE 193 193 193 ILE ILE B . n B 1 194 LEU 194 194 194 LEU LEU B . n B 1 195 GLN 195 195 195 GLN GLN B . n B 1 196 ASN 196 196 196 ASN ASN B . n B 1 197 GLN 197 197 ? ? ? B . n B 1 198 GLY 198 198 ? ? ? B . n B 1 199 ASN 199 199 ? ? ? B . n C 2 1 DT 1 -7 -7 DT DT H . n C 2 2 DG 2 -6 -6 DG DG H . n C 2 3 DC 3 -5 -5 DC DC H . n C 2 4 DG 4 -4 -4 DG DG H . n C 2 5 DC 5 -3 -3 DC DC H . n C 2 6 DT 6 -2 -2 DT DT H . n C 2 7 DT 7 -1 -1 DT DT H . n C 2 8 DC 8 0 0 DC DC H . n C 2 9 DG 9 1 1 DG DG H . n C 2 10 DC 10 2 2 DC DC H . n C 2 11 DG 11 3 3 DG DG H . n C 2 12 DC 12 4 4 DC DC H . n C 2 13 DT 13 5 5 DT DT H . n D 2 1 DT 1 -7 -7 DT DT C . n D 2 2 DG 2 -6 -6 DG DG C . n D 2 3 DC 3 -5 -5 DC DC C . n D 2 4 DG 4 -4 -4 DG DG C . n D 2 5 DC 5 -3 -3 DC DC C . n D 2 6 DT 6 -2 -2 DT DT C . n D 2 7 DT 7 -1 -1 DT DT C . n D 2 8 DC 8 0 0 DC DC C . n D 2 9 DG 9 1 1 DG DG C . n D 2 10 DC 10 2 2 DC DC C . n D 2 11 DG 11 3 3 DG DG C . n D 2 12 DC 12 4 4 DC DC C . n D 2 13 DT 13 5 5 DT DT C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 IHP 1 201 201 IHP I6P A . F 4 ZN 1 202 2 ZN ZN A . G 5 CL 1 203 1 CL CL A . H 6 PO4 1 204 1 PO4 PO4 A . I 3 IHP 1 201 201 IHP I6P B . J 4 ZN 1 202 1 ZN ZN B . K 5 CL 1 203 2 CL CL B . L 7 HOH 1 301 15 HOH HOH A . L 7 HOH 2 302 8 HOH HOH A . L 7 HOH 3 303 6 HOH HOH A . L 7 HOH 4 304 10 HOH HOH A . L 7 HOH 5 305 2 HOH HOH A . L 7 HOH 6 306 7 HOH HOH A . L 7 HOH 7 307 11 HOH HOH A . L 7 HOH 8 308 9 HOH HOH A . L 7 HOH 9 309 16 HOH HOH A . L 7 HOH 10 310 12 HOH HOH A . L 7 HOH 11 311 13 HOH HOH A . M 7 HOH 1 301 5 HOH HOH B . M 7 HOH 2 302 14 HOH HOH B . M 7 HOH 3 303 1 HOH HOH B . M 7 HOH 4 304 4 HOH HOH B . N 7 HOH 1 101 3 HOH HOH H . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 10 ? CG ? A ARG 10 CG 2 1 Y 1 A ARG 10 ? CD ? A ARG 10 CD 3 1 Y 1 A ARG 10 ? NE ? A ARG 10 NE 4 1 Y 1 A ARG 10 ? CZ ? A ARG 10 CZ 5 1 Y 1 A ARG 10 ? NH1 ? A ARG 10 NH1 6 1 Y 1 A ARG 10 ? NH2 ? A ARG 10 NH2 7 1 Y 1 A ASN 42 ? CG ? A ASN 42 CG 8 1 Y 1 A ASN 42 ? OD1 ? A ASN 42 OD1 9 1 Y 1 A ASN 42 ? ND2 ? A ASN 42 ND2 10 1 Y 1 A LYS 47 ? CG ? A LYS 47 CG 11 1 Y 1 A LYS 47 ? CD ? A LYS 47 CD 12 1 Y 1 A LYS 47 ? CE ? A LYS 47 CE 13 1 Y 1 A LYS 47 ? NZ ? A LYS 47 NZ 14 1 Y 1 A ARG 52 ? CG ? A ARG 52 CG 15 1 Y 1 A ARG 52 ? CD ? A ARG 52 CD 16 1 Y 1 A ARG 52 ? NE ? A ARG 52 NE 17 1 Y 1 A ARG 52 ? CZ ? A ARG 52 CZ 18 1 Y 1 A ARG 52 ? NH1 ? A ARG 52 NH1 19 1 Y 1 A ARG 52 ? NH2 ? A ARG 52 NH2 20 1 Y 1 A LEU 62 ? CG ? A LEU 62 CG 21 1 Y 1 A LEU 62 ? CD1 ? A LEU 62 CD1 22 1 Y 1 A LEU 62 ? CD2 ? A LEU 62 CD2 23 1 Y 1 A LEU 63 ? CG ? A LEU 63 CG 24 1 Y 1 A LEU 63 ? CD1 ? A LEU 63 CD1 25 1 Y 1 A LEU 63 ? CD2 ? A LEU 63 CD2 26 1 Y 1 A GLU 181 ? CG ? A GLU 181 CG 27 1 Y 1 A GLU 181 ? CD ? A GLU 181 CD 28 1 Y 1 A GLU 181 ? OE1 ? A GLU 181 OE1 29 1 Y 1 A GLU 181 ? OE2 ? A GLU 181 OE2 30 1 Y 1 A ASN 196 ? CG ? A ASN 196 CG 31 1 Y 1 A ASN 196 ? OD1 ? A ASN 196 OD1 32 1 Y 1 A ASN 196 ? ND2 ? A ASN 196 ND2 33 1 Y 1 B VAL 46 ? CG1 ? B VAL 46 CG1 34 1 Y 1 B VAL 46 ? CG2 ? B VAL 46 CG2 35 1 Y 1 B LYS 47 ? CG ? B LYS 47 CG 36 1 Y 1 B LYS 47 ? CD ? B LYS 47 CD 37 1 Y 1 B LYS 47 ? CE ? B LYS 47 CE 38 1 Y 1 B LYS 47 ? NZ ? B LYS 47 NZ 39 1 Y 1 B MET 48 ? CG ? B MET 48 CG 40 1 Y 1 B MET 48 ? SD ? B MET 48 SD 41 1 Y 1 B MET 48 ? CE ? B MET 48 CE 42 1 Y 1 B LEU 62 ? CG ? B LEU 62 CG 43 1 Y 1 B LEU 62 ? CD1 ? B LEU 62 CD1 44 1 Y 1 B LEU 62 ? CD2 ? B LEU 62 CD2 45 1 Y 1 B LEU 63 ? CG ? B LEU 63 CG 46 1 Y 1 B LEU 63 ? CD1 ? B LEU 63 CD1 47 1 Y 1 B LEU 63 ? CD2 ? B LEU 63 CD2 48 1 Y 1 B GLU 181 ? CG ? B GLU 181 CG 49 1 Y 1 B GLU 181 ? CD ? B GLU 181 CD 50 1 Y 1 B GLU 181 ? OE1 ? B GLU 181 OE1 51 1 Y 1 B GLU 181 ? OE2 ? B GLU 181 OE2 52 1 Y 1 B ASN 196 ? CG ? B ASN 196 CG 53 1 Y 1 B ASN 196 ? OD1 ? B ASN 196 OD1 54 1 Y 1 B ASN 196 ? ND2 ? B ASN 196 ND2 # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data collection' ? ? ? ? ? ? ? ? ? ? ? JBluIce-EPICS ? ? ? . 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? pointless ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? MOLREP ? ? ? . 5 ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0267 6 ? 'model building' ? ? ? ? ? ? ? ? ? ? ? Coot ? ? ? 0.8.9.2 7 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 103.570 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 8FIM _cell.details ? _cell.formula_units_Z ? _cell.length_a 53.917 _cell.length_a_esd ? _cell.length_b 56.904 _cell.length_b_esd ? _cell.length_c 91.549 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8FIM _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8FIM _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.51 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 56.3 _exptl_crystal.description 'Tiny flattened needle' _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.6 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;A3A-E72A (50 mM MES pH 6.0, 100 mM NaCl, 1 mM TCEP, 0.2 mM EDTA) was mixed with oligonucleotides (10 mM Tris/HCl pH 7.9, 1 mM EDTA) at 0.85 mM and 1.7 mM respectively. Dilution was done with protein buffer. The mixture was added to crystallization liquid 1 to 1 and the mixture was pipetted on siliconized glass disks and sealed on top of a reservoir of crystallization liquid for hanging drop crystallization at 12 degrees Celsius. The crystallization liquid has the following composition: 100 mM Bicine at pH 6.6, 200 mM NaCl, 20 mM putrescine, 1 mM TCEP, 1 mM inositol hexaphosphate (phytic acid) and 45 % pentaerythritol propoxylate (5/4 PO/OH) ; _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 285 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details '1 vertical and 2 horizontal focussing mirrors' _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 9M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2021-06-22 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Si(111) double crystal monochromator' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.953739 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'AUSTRALIAN SYNCHROTRON BEAMLINE MX2' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.953739 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline MX2 _diffrn_source.pdbx_synchrotron_site 'Australian Synchrotron' # _reflns.B_iso_Wilson_estimate 51.0 _reflns.entry_id 8FIM _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.22 _reflns.d_resolution_low 47.99 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 26243 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 97.3 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 3.4 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 6.2 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 0.46 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.110 _reflns.pdbx_Rpim_I_all 0.059 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.995 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.092 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 2.22 _reflns_shell.d_res_low 2.29 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 0.6 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 2098 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 3.2 _reflns_shell.pdbx_chi_squared 0.31 _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 1.826 _reflns_shell.pdbx_Rpim_I_all 0.979 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.332 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all 97.9 _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 1.535 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] -1.5900 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] 1.6500 _refine.aniso_B[2][2] 1.0200 _refine.aniso_B[2][3] -0.0000 _refine.aniso_B[3][3] -0.2100 _refine.B_iso_max 162.280 _refine.B_iso_mean 62.6300 _refine.B_iso_min 38.980 _refine.correlation_coeff_Fo_to_Fc 0.9370 _refine.correlation_coeff_Fo_to_Fc_free 0.9350 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : WITH TLS ADDED' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8FIM _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.2200 _refine.ls_d_res_low 47.9900 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 24929 _refine.ls_number_reflns_R_free 1309 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 97.2000 _refine.ls_percent_reflns_R_free 5.0000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2396 _refine.ls_R_factor_R_free 0.2772 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2376 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details MASK _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 5KEG _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.3220 _refine.pdbx_overall_ESU_R_Free 0.2420 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 27.0090 _refine.overall_SU_ML 0.2990 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 2.2200 _refine_hist.d_res_low 47.9900 _refine_hist.number_atoms_solvent 16 _refine_hist.number_atoms_total 3643 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 400 _refine_hist.pdbx_B_iso_mean_ligand 112.97 _refine_hist.pdbx_B_iso_mean_solvent 49.14 _refine_hist.pdbx_number_atoms_protein 3026 _refine_hist.pdbx_number_atoms_nucleic_acid 520 _refine_hist.pdbx_number_atoms_ligand 81 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.008 0.013 3789 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.002 0.015 3076 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.870 1.661 5272 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.319 1.577 7056 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 7.364 5.000 374 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 32.704 21.071 196 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 16.256 15.000 472 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 20.660 15.000 26 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.111 0.200 483 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.011 0.020 3952 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.003 0.020 938 ? r_gen_planes_other ? ? # loop_ _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_B_iso _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_asym_id _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.pdbx_rms _refine_ls_restr_ncs.pdbx_weight _refine_ls_restr_ncs.pdbx_ens_id 'X-RAY DIFFRACTION' 1 ? ? 0.110 ? 0.050 1 'interatomic distance' ? A 5940 ? ? 1 'X-RAY DIFFRACTION' 2 ? ? 0.110 ? 0.050 2 'interatomic distance' ? B 5940 ? ? 1 'X-RAY DIFFRACTION' 1 ? ? 0.060 ? 0.050 3 'interatomic distance' ? H 1160 ? ? 2 'X-RAY DIFFRACTION' 2 ? ? 0.060 ? 0.050 4 'interatomic distance' ? C 1160 ? ? 2 # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.22 _refine_ls_shell.d_res_low 2.2760 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 75 _refine_ls_shell.number_reflns_R_work 1560 _refine_ls_shell.percent_reflns_obs 81.6300 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free_error 0.0000 _refine_ls_shell.R_factor_R_work 0.3720 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? _refine_ls_shell.R_factor_R_free 0.4190 # loop_ _struct_ncs_dom.pdbx_ens_id _struct_ncs_dom.id _struct_ncs_dom.details 1 1 A 1 2 B 2 1 H 2 2 C # loop_ _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_comp_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_comp_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.selection_details 1 1 0 A ARG 10 . A ASN 196 . A ARG 10 A ASN 196 0 ? 1 2 0 B ARG 10 . B ASN 196 . B ARG 10 B ASN 196 0 ? 2 1 0 C DT 1 . C DT 13 . H DT -7 H DT 5 0 ? 2 2 0 D DT 1 . D DT 13 . C DT -7 C DT 5 0 ? # loop_ _struct_ncs_ens.id _struct_ncs_ens.details 1 ? 2 ? # _struct.entry_id 8FIM _struct.title 'Structure of APOBEC3A (E72A inactive mutant) in complex with TTC-hairpin DNA substrate' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8FIM _struct_keywords.text 'APOBEC, APOBEC3A, A3A, APOBEC3A E72A mutant, cancer, DNA, mutation, cytidine deaminase, hairpin DNA, DNA BINDING PROTEIN' _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 4 ? G N N 5 ? H N N 6 ? I N N 3 ? J N N 4 ? K N N 5 ? L N N 7 ? M N N 7 ? N N N 7 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP ABC3A_HUMAN P31941 ? 1 ;MEASPASGPRHLMDPHIFTSNFNNGIGRHKTYLCYEVERLDNGTSVKMDQHRGFLHNQAKNLLCGFYGRHAELRFLDLVP SLQLDPAQIYRVTWFISWSPCFSWGCAGEVRAFLQENTHVRLRIFAARIYDYDPLYKEALQMLRDAGAQVSIMTYDEFKH CWDTFVDHQGCPFQPWDGLDEHSQALSGRLRAILQNQGN ; 1 2 PDB 8FIM 8FIM ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8FIM A 1 ? 199 ? P31941 1 ? 199 ? 1 199 2 1 8FIM B 1 ? 199 ? P31941 1 ? 199 ? 1 199 3 2 8FIM H 1 ? 13 ? 8FIM -7 ? 5 ? -7 5 4 2 8FIM C 1 ? 13 ? 8FIM -7 ? 5 ? -7 5 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 8FIM ALA A 72 ? UNP P31941 GLU 72 'engineered mutation' 72 1 2 8FIM ALA B 72 ? UNP P31941 GLU 72 'engineered mutation' 72 2 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 author_and_software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1860 ? 1 MORE -58 ? 1 'SSA (A^2)' 12000 ? 2 'ABSA (A^2)' 1810 ? 2 MORE -60 ? 2 'SSA (A^2)' 11870 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,D,E,F,G,H,L 2 1 B,C,I,J,K,M,N # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support SAXS _pdbx_struct_assembly_auth_evidence.details 'SAXS data support monomeric APOBEC3A-hairpinDNA complex.' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 14 ? ASN A 23 ? ASP A 14 ASN A 23 1 ? 10 HELX_P HELX_P2 AA2 ASN A 61 ? GLY A 65 ? ASN A 61 GLY A 65 5 ? 5 HELX_P HELX_P3 AA3 HIS A 70 ? LEU A 78 ? HIS A 70 LEU A 78 1 ? 9 HELX_P HELX_P4 AA4 LEU A 78 ? GLN A 83 ? LEU A 78 GLN A 83 1 ? 6 HELX_P HELX_P5 AA5 GLY A 105 ? ASN A 117 ? GLY A 105 ASN A 117 1 ? 13 HELX_P HELX_P6 AA6 LEU A 135 ? ALA A 146 ? LEU A 135 ALA A 146 1 ? 12 HELX_P HELX_P7 AA7 THR A 154 ? VAL A 166 ? THR A 154 VAL A 166 1 ? 13 HELX_P HELX_P8 AA8 GLY A 178 ? ASN A 196 ? GLY A 178 ASN A 196 1 ? 19 HELX_P HELX_P9 AA9 ASP B 14 ? ASN B 23 ? ASP B 14 ASN B 23 1 ? 10 HELX_P HELX_P10 AB1 ASN B 61 ? GLY B 65 ? ASN B 61 GLY B 65 5 ? 5 HELX_P HELX_P11 AB2 HIS B 70 ? LEU B 78 ? HIS B 70 LEU B 78 1 ? 9 HELX_P HELX_P12 AB3 VAL B 79 ? GLN B 83 ? VAL B 79 GLN B 83 5 ? 5 HELX_P HELX_P13 AB4 GLY B 105 ? ASN B 117 ? GLY B 105 ASN B 117 1 ? 13 HELX_P HELX_P14 AB5 LEU B 135 ? ALA B 146 ? LEU B 135 ALA B 146 1 ? 12 HELX_P HELX_P15 AB6 THR B 154 ? VAL B 166 ? THR B 154 VAL B 166 1 ? 13 HELX_P HELX_P16 AB7 GLY B 178 ? ASN B 196 ? GLY B 178 ASN B 196 1 ? 19 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A HIS 70 ND1 ? ? ? 1_555 F ZN . ZN ? ? A HIS 70 A ZN 202 1_555 ? ? ? ? ? ? ? 1.841 ? ? metalc2 metalc ? ? A CYS 101 SG ? ? ? 1_555 F ZN . ZN ? ? A CYS 101 A ZN 202 1_555 ? ? ? ? ? ? ? 2.491 ? ? metalc3 metalc ? ? A CYS 106 SG ? ? ? 1_555 F ZN . ZN ? ? A CYS 106 A ZN 202 1_555 ? ? ? ? ? ? ? 1.979 ? ? metalc4 metalc ? ? B HIS 70 ND1 ? ? ? 1_555 J ZN . ZN ? ? B HIS 70 B ZN 202 1_555 ? ? ? ? ? ? ? 1.997 ? ? metalc5 metalc ? ? B CYS 101 SG ? ? ? 1_555 J ZN . ZN ? ? B CYS 101 B ZN 202 1_555 ? ? ? ? ? ? ? 2.652 ? ? metalc6 metalc ? ? B CYS 106 SG ? ? ? 1_555 J ZN . ZN ? ? B CYS 106 B ZN 202 1_555 ? ? ? ? ? ? ? 2.013 ? ? hydrog1 hydrog ? ? D DT 1 N3 ? ? ? 1_555 D DT 13 O2 ? ? C DT -7 C DT 5 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog2 hydrog ? ? D DT 1 O4 ? ? ? 1_555 D DT 13 N3 ? ? C DT -7 C DT 5 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog3 hydrog ? ? D DG 2 N1 ? ? ? 1_555 D DC 12 N3 ? ? C DG -6 C DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? D DG 2 N2 ? ? ? 1_555 D DC 12 O2 ? ? C DG -6 C DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? D DG 2 O6 ? ? ? 1_555 D DC 12 N4 ? ? C DG -6 C DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? D DC 3 N3 ? ? ? 1_555 D DG 11 N1 ? ? C DC -5 C DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? D DC 3 N4 ? ? ? 1_555 D DG 11 O6 ? ? C DC -5 C DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? D DC 3 O2 ? ? ? 1_555 D DG 11 N2 ? ? C DC -5 C DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? D DG 4 N1 ? ? ? 1_555 D DC 10 N3 ? ? C DG -4 C DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? D DG 4 N2 ? ? ? 1_555 D DC 10 O2 ? ? C DG -4 C DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? D DG 4 O6 ? ? ? 1_555 D DC 10 N4 ? ? C DG -4 C DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? D DC 5 N3 ? ? ? 1_555 D DG 9 N1 ? ? C DC -3 C DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? D DC 5 N4 ? ? ? 1_555 D DG 9 O6 ? ? C DC -3 C DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? D DC 5 O2 ? ? ? 1_555 D DG 9 N2 ? ? C DC -3 C DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? C DT 1 N3 ? ? ? 1_555 C DT 13 O2 ? ? H DT -7 H DT 5 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog16 hydrog ? ? C DT 1 O4 ? ? ? 1_555 C DT 13 N3 ? ? H DT -7 H DT 5 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog17 hydrog ? ? C DG 2 N1 ? ? ? 1_555 C DC 12 N3 ? ? H DG -6 H DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C DG 2 N2 ? ? ? 1_555 C DC 12 O2 ? ? H DG -6 H DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C DG 2 O6 ? ? ? 1_555 C DC 12 N4 ? ? H DG -6 H DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C DC 3 N3 ? ? ? 1_555 C DG 11 N1 ? ? H DC -5 H DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C DC 3 N4 ? ? ? 1_555 C DG 11 O6 ? ? H DC -5 H DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C DC 3 O2 ? ? ? 1_555 C DG 11 N2 ? ? H DC -5 H DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C DG 4 N1 ? ? ? 1_555 C DC 10 N3 ? ? H DG -4 H DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C DG 4 N2 ? ? ? 1_555 C DC 10 O2 ? ? H DG -4 H DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C DG 4 O6 ? ? ? 1_555 C DC 10 N4 ? ? H DG -4 H DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C DC 5 N3 ? ? ? 1_555 C DG 9 N1 ? ? H DC -3 H DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? C DC 5 N4 ? ? ? 1_555 C DG 9 O6 ? ? H DC -3 H DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? C DC 5 O2 ? ? ? 1_555 C DG 9 N2 ? ? H DC -3 H DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 ND1 ? A HIS 70 ? A HIS 70 ? 1_555 ZN ? F ZN . ? A ZN 202 ? 1_555 SG ? A CYS 101 ? A CYS 101 ? 1_555 111.2 ? 2 ND1 ? A HIS 70 ? A HIS 70 ? 1_555 ZN ? F ZN . ? A ZN 202 ? 1_555 SG ? A CYS 106 ? A CYS 106 ? 1_555 109.7 ? 3 SG ? A CYS 101 ? A CYS 101 ? 1_555 ZN ? F ZN . ? A ZN 202 ? 1_555 SG ? A CYS 106 ? A CYS 106 ? 1_555 90.6 ? 4 ND1 ? B HIS 70 ? B HIS 70 ? 1_555 ZN ? J ZN . ? B ZN 202 ? 1_555 SG ? B CYS 101 ? B CYS 101 ? 1_555 98.6 ? 5 ND1 ? B HIS 70 ? B HIS 70 ? 1_555 ZN ? J ZN . ? B ZN 202 ? 1_555 SG ? B CYS 106 ? B CYS 106 ? 1_555 125.7 ? 6 SG ? B CYS 101 ? B CYS 101 ? 1_555 ZN ? J ZN . ? B ZN 202 ? 1_555 SG ? B CYS 106 ? B CYS 106 ? 1_555 84.7 ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? parallel AA1 4 5 ? parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? parallel AA2 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 THR A 44 ? HIS A 56 ? THR A 44 HIS A 56 AA1 2 TYR A 32 ? ASP A 41 ? TYR A 32 ASP A 41 AA1 3 ILE A 89 ? TRP A 98 ? ILE A 89 TRP A 98 AA1 4 VAL A 120 ? ARG A 128 ? VAL A 120 ARG A 128 AA1 5 GLN A 149 ? ILE A 152 ? GLN A 149 ILE A 152 AA2 1 HIS B 51 ? HIS B 56 ? HIS B 51 HIS B 56 AA2 2 TYR B 32 ? ARG B 39 ? TYR B 32 ARG B 39 AA2 3 TYR B 90 ? TRP B 98 ? TYR B 90 TRP B 98 AA2 4 VAL B 120 ? ARG B 128 ? VAL B 120 ARG B 128 AA2 5 GLN B 149 ? ILE B 152 ? GLN B 149 ILE B 152 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O VAL A 46 ? O VAL A 46 N ARG A 39 ? N ARG A 39 AA1 2 3 N GLU A 38 ? N GLU A 38 O ARG A 91 ? O ARG A 91 AA1 3 4 N TYR A 90 ? N TYR A 90 O ARG A 121 ? O ARG A 121 AA1 4 5 N ILE A 124 ? N ILE A 124 O SER A 151 ? O SER A 151 AA2 1 2 O LEU B 55 ? O LEU B 55 N LEU B 33 ? N LEU B 33 AA2 2 3 N GLU B 38 ? N GLU B 38 O ARG B 91 ? O ARG B 91 AA2 3 4 N TYR B 90 ? N TYR B 90 O ARG B 121 ? O ARG B 121 AA2 4 5 N ILE B 124 ? N ILE B 124 O SER B 151 ? O SER B 151 # _pdbx_entry_details.entry_id 8FIM _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_protein_modification ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 189 ? ? CZ A ARG 189 ? ? NH2 A ARG 189 ? ? 116.81 120.30 -3.49 0.50 N 2 1 "O4'" H DG -6 ? ? "C1'" H DG -6 ? ? N9 H DG -6 ? ? 110.54 108.30 2.24 0.30 N 3 1 "C3'" H DC -5 ? ? "O3'" H DC -5 ? ? P H DG -4 ? ? 110.86 119.70 -8.84 1.20 Y 4 1 "O4'" H DC -3 ? ? "C1'" H DC -3 ? ? N1 H DC -3 ? ? 111.26 108.30 2.96 0.30 N 5 1 "C3'" C DC -5 ? ? "O3'" C DC -5 ? ? P C DG -4 ? ? 108.59 119.70 -11.11 1.20 Y 6 1 "O4'" C DC -3 ? ? "C1'" C DC -3 ? ? N1 C DC -3 ? ? 111.60 108.30 3.30 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 117 ? ? -110.56 79.78 2 1 ASP B 41 ? ? -69.58 68.36 3 1 ASN B 42 ? ? 55.62 84.09 4 1 VAL B 46 ? ? 69.17 100.62 5 1 MET B 48 ? ? -164.96 -145.73 6 1 ASN B 117 ? ? -111.30 76.43 # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined 1.4180 -0.0100 42.3200 0.6446 ? -0.0297 ? -0.1604 ? 0.0291 ? -0.0295 ? 0.3230 ? 1.6446 ? -0.0285 ? 0.0523 ? 0.8938 ? 0.1943 ? 1.1965 ? -0.0166 ? -0.0365 ? -0.0321 ? -0.0936 ? 0.1135 ? 0.0097 ? -0.0212 ? 0.1375 ? -0.0968 ? 2 'X-RAY DIFFRACTION' ? refined 26.7500 -10.8810 12.3800 0.6749 ? -0.0299 ? -0.1730 ? 0.0624 ? 0.0000 ? 0.2906 ? 0.9950 ? 0.0421 ? -0.3544 ? 1.7657 ? -0.6603 ? 3.5751 ? 0.0470 ? -0.1858 ? -0.0458 ? -0.0242 ? 0.0653 ? -0.0442 ? -0.2572 ? 0.3207 ? -0.1123 ? 3 'X-RAY DIFFRACTION' ? refined 1.3600 11.9280 21.3080 0.7705 ? -0.1549 ? 0.0068 ? 0.3056 ? 0.2113 ? 0.5429 ? 0.6661 ? -0.3416 ? 0.9778 ? 5.6585 ? -1.2606 ? 2.5155 ? 0.0328 ? 0.3036 ? 0.2509 ? -0.2033 ? 0.2665 ? 0.1027 ? 0.0185 ? 0.2121 ? -0.2993 ? 4 'X-RAY DIFFRACTION' ? refined 6.3010 -23.7180 15.2580 0.7737 ? -0.1194 ? -0.0395 ? 0.3094 ? 0.2339 ? 0.5550 ? 3.3497 ? 2.2688 ? -0.2101 ? 4.6385 ? 0.9157 ? 0.9738 ? -0.2837 ? -0.3122 ? 0.2095 ? -0.0455 ? 0.3262 ? 0.6974 ? 0.3670 ? -0.1346 ? -0.0425 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? A 10 ? ? ? A 196 ? ? ? 2 'X-RAY DIFFRACTION' 2 ? ? B 10 ? ? ? B 196 ? ? ? 3 'X-RAY DIFFRACTION' 3 ? ? C -7 ? ? ? C 5 ? ? ? 4 'X-RAY DIFFRACTION' 4 ? ? H -7 ? ? ? H 5 ? ? ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A GLU 2 ? A GLU 2 3 1 Y 1 A ALA 3 ? A ALA 3 4 1 Y 1 A SER 4 ? A SER 4 5 1 Y 1 A PRO 5 ? A PRO 5 6 1 Y 1 A ALA 6 ? A ALA 6 7 1 Y 1 A SER 7 ? A SER 7 8 1 Y 1 A GLY 8 ? A GLY 8 9 1 Y 1 A PRO 9 ? A PRO 9 10 1 Y 1 A GLN 197 ? A GLN 197 11 1 Y 1 A GLY 198 ? A GLY 198 12 1 Y 1 A ASN 199 ? A ASN 199 13 1 Y 1 B MET 1 ? B MET 1 14 1 Y 1 B GLU 2 ? B GLU 2 15 1 Y 1 B ALA 3 ? B ALA 3 16 1 Y 1 B SER 4 ? B SER 4 17 1 Y 1 B PRO 5 ? B PRO 5 18 1 Y 1 B ALA 6 ? B ALA 6 19 1 Y 1 B SER 7 ? B SER 7 20 1 Y 1 B GLY 8 ? B GLY 8 21 1 Y 1 B PRO 9 ? B PRO 9 22 1 Y 1 B GLN 197 ? B GLN 197 23 1 Y 1 B GLY 198 ? B GLY 198 24 1 Y 1 B ASN 199 ? B ASN 199 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CL CL CL N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 DC OP3 O N N 89 DC P P N N 90 DC OP1 O N N 91 DC OP2 O N N 92 DC "O5'" O N N 93 DC "C5'" C N N 94 DC "C4'" C N R 95 DC "O4'" O N N 96 DC "C3'" C N S 97 DC "O3'" O N N 98 DC "C2'" C N N 99 DC "C1'" C N R 100 DC N1 N N N 101 DC C2 C N N 102 DC O2 O N N 103 DC N3 N N N 104 DC C4 C N N 105 DC N4 N N N 106 DC C5 C N N 107 DC C6 C N N 108 DC HOP3 H N N 109 DC HOP2 H N N 110 DC "H5'" H N N 111 DC "H5''" H N N 112 DC "H4'" H N N 113 DC "H3'" H N N 114 DC "HO3'" H N N 115 DC "H2'" H N N 116 DC "H2''" H N N 117 DC "H1'" H N N 118 DC H41 H N N 119 DC H42 H N N 120 DC H5 H N N 121 DC H6 H N N 122 DG OP3 O N N 123 DG P P N N 124 DG OP1 O N N 125 DG OP2 O N N 126 DG "O5'" O N N 127 DG "C5'" C N N 128 DG "C4'" C N R 129 DG "O4'" O N N 130 DG "C3'" C N S 131 DG "O3'" O N N 132 DG "C2'" C N N 133 DG "C1'" C N R 134 DG N9 N Y N 135 DG C8 C Y N 136 DG N7 N Y N 137 DG C5 C Y N 138 DG C6 C N N 139 DG O6 O N N 140 DG N1 N N N 141 DG C2 C N N 142 DG N2 N N N 143 DG N3 N N N 144 DG C4 C Y N 145 DG HOP3 H N N 146 DG HOP2 H N N 147 DG "H5'" H N N 148 DG "H5''" H N N 149 DG "H4'" H N N 150 DG "H3'" H N N 151 DG "HO3'" H N N 152 DG "H2'" H N N 153 DG "H2''" H N N 154 DG "H1'" H N N 155 DG H8 H N N 156 DG H1 H N N 157 DG H21 H N N 158 DG H22 H N N 159 DT OP3 O N N 160 DT P P N N 161 DT OP1 O N N 162 DT OP2 O N N 163 DT "O5'" O N N 164 DT "C5'" C N N 165 DT "C4'" C N R 166 DT "O4'" O N N 167 DT "C3'" C N S 168 DT "O3'" O N N 169 DT "C2'" C N N 170 DT "C1'" C N R 171 DT N1 N N N 172 DT C2 C N N 173 DT O2 O N N 174 DT N3 N N N 175 DT C4 C N N 176 DT O4 O N N 177 DT C5 C N N 178 DT C7 C N N 179 DT C6 C N N 180 DT HOP3 H N N 181 DT HOP2 H N N 182 DT "H5'" H N N 183 DT "H5''" H N N 184 DT "H4'" H N N 185 DT "H3'" H N N 186 DT "HO3'" H N N 187 DT "H2'" H N N 188 DT "H2''" H N N 189 DT "H1'" H N N 190 DT H3 H N N 191 DT H71 H N N 192 DT H72 H N N 193 DT H73 H N N 194 DT H6 H N N 195 GLN N N N N 196 GLN CA C N S 197 GLN C C N N 198 GLN O O N N 199 GLN CB C N N 200 GLN CG C N N 201 GLN CD C N N 202 GLN OE1 O N N 203 GLN NE2 N N N 204 GLN OXT O N N 205 GLN H H N N 206 GLN H2 H N N 207 GLN HA H N N 208 GLN HB2 H N N 209 GLN HB3 H N N 210 GLN HG2 H N N 211 GLN HG3 H N N 212 GLN HE21 H N N 213 GLN HE22 H N N 214 GLN HXT H N N 215 GLU N N N N 216 GLU CA C N S 217 GLU C C N N 218 GLU O O N N 219 GLU CB C N N 220 GLU CG C N N 221 GLU CD C N N 222 GLU OE1 O N N 223 GLU OE2 O N N 224 GLU OXT O N N 225 GLU H H N N 226 GLU H2 H N N 227 GLU HA H N N 228 GLU HB2 H N N 229 GLU HB3 H N N 230 GLU HG2 H N N 231 GLU HG3 H N N 232 GLU HE2 H N N 233 GLU HXT H N N 234 GLY N N N N 235 GLY CA C N N 236 GLY C C N N 237 GLY O O N N 238 GLY OXT O N N 239 GLY H H N N 240 GLY H2 H N N 241 GLY HA2 H N N 242 GLY HA3 H N N 243 GLY HXT H N N 244 HIS N N N N 245 HIS CA C N S 246 HIS C C N N 247 HIS O O N N 248 HIS CB C N N 249 HIS CG C Y N 250 HIS ND1 N Y N 251 HIS CD2 C Y N 252 HIS CE1 C Y N 253 HIS NE2 N Y N 254 HIS OXT O N N 255 HIS H H N N 256 HIS H2 H N N 257 HIS HA H N N 258 HIS HB2 H N N 259 HIS HB3 H N N 260 HIS HD1 H N N 261 HIS HD2 H N N 262 HIS HE1 H N N 263 HIS HE2 H N N 264 HIS HXT H N N 265 HOH O O N N 266 HOH H1 H N N 267 HOH H2 H N N 268 IHP C1 C N N 269 IHP C2 C N N 270 IHP C3 C N N 271 IHP C4 C N N 272 IHP C5 C N N 273 IHP C6 C N N 274 IHP O11 O N N 275 IHP P1 P N N 276 IHP O21 O N N 277 IHP O31 O N N 278 IHP O41 O N N 279 IHP O12 O N N 280 IHP P2 P N N 281 IHP O22 O N N 282 IHP O32 O N N 283 IHP O42 O N N 284 IHP O13 O N N 285 IHP P3 P N N 286 IHP O23 O N N 287 IHP O33 O N N 288 IHP O43 O N N 289 IHP O14 O N N 290 IHP P4 P N N 291 IHP O24 O N N 292 IHP O34 O N N 293 IHP O44 O N N 294 IHP O15 O N N 295 IHP P5 P N N 296 IHP O25 O N N 297 IHP O35 O N N 298 IHP O45 O N N 299 IHP O16 O N N 300 IHP P6 P N N 301 IHP O26 O N N 302 IHP O36 O N N 303 IHP O46 O N N 304 IHP H1 H N N 305 IHP H2 H N N 306 IHP H3 H N N 307 IHP H4 H N N 308 IHP H5 H N N 309 IHP H6 H N N 310 IHP H31 H N N 311 IHP H41 H N N 312 IHP H32 H N N 313 IHP H42 H N N 314 IHP H33 H N N 315 IHP H43 H N N 316 IHP H34 H N N 317 IHP H44 H N N 318 IHP H35 H N N 319 IHP H45 H N N 320 IHP H36 H N N 321 IHP H46 H N N 322 ILE N N N N 323 ILE CA C N S 324 ILE C C N N 325 ILE O O N N 326 ILE CB C N S 327 ILE CG1 C N N 328 ILE CG2 C N N 329 ILE CD1 C N N 330 ILE OXT O N N 331 ILE H H N N 332 ILE H2 H N N 333 ILE HA H N N 334 ILE HB H N N 335 ILE HG12 H N N 336 ILE HG13 H N N 337 ILE HG21 H N N 338 ILE HG22 H N N 339 ILE HG23 H N N 340 ILE HD11 H N N 341 ILE HD12 H N N 342 ILE HD13 H N N 343 ILE HXT H N N 344 LEU N N N N 345 LEU CA C N S 346 LEU C C N N 347 LEU O O N N 348 LEU CB C N N 349 LEU CG C N N 350 LEU CD1 C N N 351 LEU CD2 C N N 352 LEU OXT O N N 353 LEU H H N N 354 LEU H2 H N N 355 LEU HA H N N 356 LEU HB2 H N N 357 LEU HB3 H N N 358 LEU HG H N N 359 LEU HD11 H N N 360 LEU HD12 H N N 361 LEU HD13 H N N 362 LEU HD21 H N N 363 LEU HD22 H N N 364 LEU HD23 H N N 365 LEU HXT H N N 366 LYS N N N N 367 LYS CA C N S 368 LYS C C N N 369 LYS O O N N 370 LYS CB C N N 371 LYS CG C N N 372 LYS CD C N N 373 LYS CE C N N 374 LYS NZ N N N 375 LYS OXT O N N 376 LYS H H N N 377 LYS H2 H N N 378 LYS HA H N N 379 LYS HB2 H N N 380 LYS HB3 H N N 381 LYS HG2 H N N 382 LYS HG3 H N N 383 LYS HD2 H N N 384 LYS HD3 H N N 385 LYS HE2 H N N 386 LYS HE3 H N N 387 LYS HZ1 H N N 388 LYS HZ2 H N N 389 LYS HZ3 H N N 390 LYS HXT H N N 391 MET N N N N 392 MET CA C N S 393 MET C C N N 394 MET O O N N 395 MET CB C N N 396 MET CG C N N 397 MET SD S N N 398 MET CE C N N 399 MET OXT O N N 400 MET H H N N 401 MET H2 H N N 402 MET HA H N N 403 MET HB2 H N N 404 MET HB3 H N N 405 MET HG2 H N N 406 MET HG3 H N N 407 MET HE1 H N N 408 MET HE2 H N N 409 MET HE3 H N N 410 MET HXT H N N 411 PHE N N N N 412 PHE CA C N S 413 PHE C C N N 414 PHE O O N N 415 PHE CB C N N 416 PHE CG C Y N 417 PHE CD1 C Y N 418 PHE CD2 C Y N 419 PHE CE1 C Y N 420 PHE CE2 C Y N 421 PHE CZ C Y N 422 PHE OXT O N N 423 PHE H H N N 424 PHE H2 H N N 425 PHE HA H N N 426 PHE HB2 H N N 427 PHE HB3 H N N 428 PHE HD1 H N N 429 PHE HD2 H N N 430 PHE HE1 H N N 431 PHE HE2 H N N 432 PHE HZ H N N 433 PHE HXT H N N 434 PO4 P P N N 435 PO4 O1 O N N 436 PO4 O2 O N N 437 PO4 O3 O N N 438 PO4 O4 O N N 439 PRO N N N N 440 PRO CA C N S 441 PRO C C N N 442 PRO O O N N 443 PRO CB C N N 444 PRO CG C N N 445 PRO CD C N N 446 PRO OXT O N N 447 PRO H H N N 448 PRO HA H N N 449 PRO HB2 H N N 450 PRO HB3 H N N 451 PRO HG2 H N N 452 PRO HG3 H N N 453 PRO HD2 H N N 454 PRO HD3 H N N 455 PRO HXT H N N 456 SER N N N N 457 SER CA C N S 458 SER C C N N 459 SER O O N N 460 SER CB C N N 461 SER OG O N N 462 SER OXT O N N 463 SER H H N N 464 SER H2 H N N 465 SER HA H N N 466 SER HB2 H N N 467 SER HB3 H N N 468 SER HG H N N 469 SER HXT H N N 470 THR N N N N 471 THR CA C N S 472 THR C C N N 473 THR O O N N 474 THR CB C N R 475 THR OG1 O N N 476 THR CG2 C N N 477 THR OXT O N N 478 THR H H N N 479 THR H2 H N N 480 THR HA H N N 481 THR HB H N N 482 THR HG1 H N N 483 THR HG21 H N N 484 THR HG22 H N N 485 THR HG23 H N N 486 THR HXT H N N 487 TRP N N N N 488 TRP CA C N S 489 TRP C C N N 490 TRP O O N N 491 TRP CB C N N 492 TRP CG C Y N 493 TRP CD1 C Y N 494 TRP CD2 C Y N 495 TRP NE1 N Y N 496 TRP CE2 C Y N 497 TRP CE3 C Y N 498 TRP CZ2 C Y N 499 TRP CZ3 C Y N 500 TRP CH2 C Y N 501 TRP OXT O N N 502 TRP H H N N 503 TRP H2 H N N 504 TRP HA H N N 505 TRP HB2 H N N 506 TRP HB3 H N N 507 TRP HD1 H N N 508 TRP HE1 H N N 509 TRP HE3 H N N 510 TRP HZ2 H N N 511 TRP HZ3 H N N 512 TRP HH2 H N N 513 TRP HXT H N N 514 TYR N N N N 515 TYR CA C N S 516 TYR C C N N 517 TYR O O N N 518 TYR CB C N N 519 TYR CG C Y N 520 TYR CD1 C Y N 521 TYR CD2 C Y N 522 TYR CE1 C Y N 523 TYR CE2 C Y N 524 TYR CZ C Y N 525 TYR OH O N N 526 TYR OXT O N N 527 TYR H H N N 528 TYR H2 H N N 529 TYR HA H N N 530 TYR HB2 H N N 531 TYR HB3 H N N 532 TYR HD1 H N N 533 TYR HD2 H N N 534 TYR HE1 H N N 535 TYR HE2 H N N 536 TYR HH H N N 537 TYR HXT H N N 538 VAL N N N N 539 VAL CA C N S 540 VAL C C N N 541 VAL O O N N 542 VAL CB C N N 543 VAL CG1 C N N 544 VAL CG2 C N N 545 VAL OXT O N N 546 VAL H H N N 547 VAL H2 H N N 548 VAL HA H N N 549 VAL HB H N N 550 VAL HG11 H N N 551 VAL HG12 H N N 552 VAL HG13 H N N 553 VAL HG21 H N N 554 VAL HG22 H N N 555 VAL HG23 H N N 556 VAL HXT H N N 557 ZN ZN ZN N N 558 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DC OP3 P sing N N 83 DC OP3 HOP3 sing N N 84 DC P OP1 doub N N 85 DC P OP2 sing N N 86 DC P "O5'" sing N N 87 DC OP2 HOP2 sing N N 88 DC "O5'" "C5'" sing N N 89 DC "C5'" "C4'" sing N N 90 DC "C5'" "H5'" sing N N 91 DC "C5'" "H5''" sing N N 92 DC "C4'" "O4'" sing N N 93 DC "C4'" "C3'" sing N N 94 DC "C4'" "H4'" sing N N 95 DC "O4'" "C1'" sing N N 96 DC "C3'" "O3'" sing N N 97 DC "C3'" "C2'" sing N N 98 DC "C3'" "H3'" sing N N 99 DC "O3'" "HO3'" sing N N 100 DC "C2'" "C1'" sing N N 101 DC "C2'" "H2'" sing N N 102 DC "C2'" "H2''" sing N N 103 DC "C1'" N1 sing N N 104 DC "C1'" "H1'" sing N N 105 DC N1 C2 sing N N 106 DC N1 C6 sing N N 107 DC C2 O2 doub N N 108 DC C2 N3 sing N N 109 DC N3 C4 doub N N 110 DC C4 N4 sing N N 111 DC C4 C5 sing N N 112 DC N4 H41 sing N N 113 DC N4 H42 sing N N 114 DC C5 C6 doub N N 115 DC C5 H5 sing N N 116 DC C6 H6 sing N N 117 DG OP3 P sing N N 118 DG OP3 HOP3 sing N N 119 DG P OP1 doub N N 120 DG P OP2 sing N N 121 DG P "O5'" sing N N 122 DG OP2 HOP2 sing N N 123 DG "O5'" "C5'" sing N N 124 DG "C5'" "C4'" sing N N 125 DG "C5'" "H5'" sing N N 126 DG "C5'" "H5''" sing N N 127 DG "C4'" "O4'" sing N N 128 DG "C4'" "C3'" sing N N 129 DG "C4'" "H4'" sing N N 130 DG "O4'" "C1'" sing N N 131 DG "C3'" "O3'" sing N N 132 DG "C3'" "C2'" sing N N 133 DG "C3'" "H3'" sing N N 134 DG "O3'" "HO3'" sing N N 135 DG "C2'" "C1'" sing N N 136 DG "C2'" "H2'" sing N N 137 DG "C2'" "H2''" sing N N 138 DG "C1'" N9 sing N N 139 DG "C1'" "H1'" sing N N 140 DG N9 C8 sing Y N 141 DG N9 C4 sing Y N 142 DG C8 N7 doub Y N 143 DG C8 H8 sing N N 144 DG N7 C5 sing Y N 145 DG C5 C6 sing N N 146 DG C5 C4 doub Y N 147 DG C6 O6 doub N N 148 DG C6 N1 sing N N 149 DG N1 C2 sing N N 150 DG N1 H1 sing N N 151 DG C2 N2 sing N N 152 DG C2 N3 doub N N 153 DG N2 H21 sing N N 154 DG N2 H22 sing N N 155 DG N3 C4 sing N N 156 DT OP3 P sing N N 157 DT OP3 HOP3 sing N N 158 DT P OP1 doub N N 159 DT P OP2 sing N N 160 DT P "O5'" sing N N 161 DT OP2 HOP2 sing N N 162 DT "O5'" "C5'" sing N N 163 DT "C5'" "C4'" sing N N 164 DT "C5'" "H5'" sing N N 165 DT "C5'" "H5''" sing N N 166 DT "C4'" "O4'" sing N N 167 DT "C4'" "C3'" sing N N 168 DT "C4'" "H4'" sing N N 169 DT "O4'" "C1'" sing N N 170 DT "C3'" "O3'" sing N N 171 DT "C3'" "C2'" sing N N 172 DT "C3'" "H3'" sing N N 173 DT "O3'" "HO3'" sing N N 174 DT "C2'" "C1'" sing N N 175 DT "C2'" "H2'" sing N N 176 DT "C2'" "H2''" sing N N 177 DT "C1'" N1 sing N N 178 DT "C1'" "H1'" sing N N 179 DT N1 C2 sing N N 180 DT N1 C6 sing N N 181 DT C2 O2 doub N N 182 DT C2 N3 sing N N 183 DT N3 C4 sing N N 184 DT N3 H3 sing N N 185 DT C4 O4 doub N N 186 DT C4 C5 sing N N 187 DT C5 C7 sing N N 188 DT C5 C6 doub N N 189 DT C7 H71 sing N N 190 DT C7 H72 sing N N 191 DT C7 H73 sing N N 192 DT C6 H6 sing N N 193 GLN N CA sing N N 194 GLN N H sing N N 195 GLN N H2 sing N N 196 GLN CA C sing N N 197 GLN CA CB sing N N 198 GLN CA HA sing N N 199 GLN C O doub N N 200 GLN C OXT sing N N 201 GLN CB CG sing N N 202 GLN CB HB2 sing N N 203 GLN CB HB3 sing N N 204 GLN CG CD sing N N 205 GLN CG HG2 sing N N 206 GLN CG HG3 sing N N 207 GLN CD OE1 doub N N 208 GLN CD NE2 sing N N 209 GLN NE2 HE21 sing N N 210 GLN NE2 HE22 sing N N 211 GLN OXT HXT sing N N 212 GLU N CA sing N N 213 GLU N H sing N N 214 GLU N H2 sing N N 215 GLU CA C sing N N 216 GLU CA CB sing N N 217 GLU CA HA sing N N 218 GLU C O doub N N 219 GLU C OXT sing N N 220 GLU CB CG sing N N 221 GLU CB HB2 sing N N 222 GLU CB HB3 sing N N 223 GLU CG CD sing N N 224 GLU CG HG2 sing N N 225 GLU CG HG3 sing N N 226 GLU CD OE1 doub N N 227 GLU CD OE2 sing N N 228 GLU OE2 HE2 sing N N 229 GLU OXT HXT sing N N 230 GLY N CA sing N N 231 GLY N H sing N N 232 GLY N H2 sing N N 233 GLY CA C sing N N 234 GLY CA HA2 sing N N 235 GLY CA HA3 sing N N 236 GLY C O doub N N 237 GLY C OXT sing N N 238 GLY OXT HXT sing N N 239 HIS N CA sing N N 240 HIS N H sing N N 241 HIS N H2 sing N N 242 HIS CA C sing N N 243 HIS CA CB sing N N 244 HIS CA HA sing N N 245 HIS C O doub N N 246 HIS C OXT sing N N 247 HIS CB CG sing N N 248 HIS CB HB2 sing N N 249 HIS CB HB3 sing N N 250 HIS CG ND1 sing Y N 251 HIS CG CD2 doub Y N 252 HIS ND1 CE1 doub Y N 253 HIS ND1 HD1 sing N N 254 HIS CD2 NE2 sing Y N 255 HIS CD2 HD2 sing N N 256 HIS CE1 NE2 sing Y N 257 HIS CE1 HE1 sing N N 258 HIS NE2 HE2 sing N N 259 HIS OXT HXT sing N N 260 HOH O H1 sing N N 261 HOH O H2 sing N N 262 IHP C1 C2 sing N N 263 IHP C1 C6 sing N N 264 IHP C1 O11 sing N N 265 IHP C1 H1 sing N N 266 IHP C2 C3 sing N N 267 IHP C2 O12 sing N N 268 IHP C2 H2 sing N N 269 IHP C3 C4 sing N N 270 IHP C3 O13 sing N N 271 IHP C3 H3 sing N N 272 IHP C4 C5 sing N N 273 IHP C4 O14 sing N N 274 IHP C4 H4 sing N N 275 IHP C5 C6 sing N N 276 IHP C5 O15 sing N N 277 IHP C5 H5 sing N N 278 IHP C6 O16 sing N N 279 IHP C6 H6 sing N N 280 IHP O11 P1 sing N N 281 IHP P1 O21 doub N N 282 IHP P1 O31 sing N N 283 IHP P1 O41 sing N N 284 IHP O31 H31 sing N N 285 IHP O41 H41 sing N N 286 IHP O12 P2 sing N N 287 IHP P2 O22 doub N N 288 IHP P2 O32 sing N N 289 IHP P2 O42 sing N N 290 IHP O32 H32 sing N N 291 IHP O42 H42 sing N N 292 IHP O13 P3 sing N N 293 IHP P3 O23 doub N N 294 IHP P3 O33 sing N N 295 IHP P3 O43 sing N N 296 IHP O33 H33 sing N N 297 IHP O43 H43 sing N N 298 IHP O14 P4 sing N N 299 IHP P4 O24 doub N N 300 IHP P4 O34 sing N N 301 IHP P4 O44 sing N N 302 IHP O34 H34 sing N N 303 IHP O44 H44 sing N N 304 IHP O15 P5 sing N N 305 IHP P5 O25 doub N N 306 IHP P5 O35 sing N N 307 IHP P5 O45 sing N N 308 IHP O35 H35 sing N N 309 IHP O45 H45 sing N N 310 IHP O16 P6 sing N N 311 IHP P6 O26 doub N N 312 IHP P6 O36 sing N N 313 IHP P6 O46 sing N N 314 IHP O36 H36 sing N N 315 IHP O46 H46 sing N N 316 ILE N CA sing N N 317 ILE N H sing N N 318 ILE N H2 sing N N 319 ILE CA C sing N N 320 ILE CA CB sing N N 321 ILE CA HA sing N N 322 ILE C O doub N N 323 ILE C OXT sing N N 324 ILE CB CG1 sing N N 325 ILE CB CG2 sing N N 326 ILE CB HB sing N N 327 ILE CG1 CD1 sing N N 328 ILE CG1 HG12 sing N N 329 ILE CG1 HG13 sing N N 330 ILE CG2 HG21 sing N N 331 ILE CG2 HG22 sing N N 332 ILE CG2 HG23 sing N N 333 ILE CD1 HD11 sing N N 334 ILE CD1 HD12 sing N N 335 ILE CD1 HD13 sing N N 336 ILE OXT HXT sing N N 337 LEU N CA sing N N 338 LEU N H sing N N 339 LEU N H2 sing N N 340 LEU CA C sing N N 341 LEU CA CB sing N N 342 LEU CA HA sing N N 343 LEU C O doub N N 344 LEU C OXT sing N N 345 LEU CB CG sing N N 346 LEU CB HB2 sing N N 347 LEU CB HB3 sing N N 348 LEU CG CD1 sing N N 349 LEU CG CD2 sing N N 350 LEU CG HG sing N N 351 LEU CD1 HD11 sing N N 352 LEU CD1 HD12 sing N N 353 LEU CD1 HD13 sing N N 354 LEU CD2 HD21 sing N N 355 LEU CD2 HD22 sing N N 356 LEU CD2 HD23 sing N N 357 LEU OXT HXT sing N N 358 LYS N CA sing N N 359 LYS N H sing N N 360 LYS N H2 sing N N 361 LYS CA C sing N N 362 LYS CA CB sing N N 363 LYS CA HA sing N N 364 LYS C O doub N N 365 LYS C OXT sing N N 366 LYS CB CG sing N N 367 LYS CB HB2 sing N N 368 LYS CB HB3 sing N N 369 LYS CG CD sing N N 370 LYS CG HG2 sing N N 371 LYS CG HG3 sing N N 372 LYS CD CE sing N N 373 LYS CD HD2 sing N N 374 LYS CD HD3 sing N N 375 LYS CE NZ sing N N 376 LYS CE HE2 sing N N 377 LYS CE HE3 sing N N 378 LYS NZ HZ1 sing N N 379 LYS NZ HZ2 sing N N 380 LYS NZ HZ3 sing N N 381 LYS OXT HXT sing N N 382 MET N CA sing N N 383 MET N H sing N N 384 MET N H2 sing N N 385 MET CA C sing N N 386 MET CA CB sing N N 387 MET CA HA sing N N 388 MET C O doub N N 389 MET C OXT sing N N 390 MET CB CG sing N N 391 MET CB HB2 sing N N 392 MET CB HB3 sing N N 393 MET CG SD sing N N 394 MET CG HG2 sing N N 395 MET CG HG3 sing N N 396 MET SD CE sing N N 397 MET CE HE1 sing N N 398 MET CE HE2 sing N N 399 MET CE HE3 sing N N 400 MET OXT HXT sing N N 401 PHE N CA sing N N 402 PHE N H sing N N 403 PHE N H2 sing N N 404 PHE CA C sing N N 405 PHE CA CB sing N N 406 PHE CA HA sing N N 407 PHE C O doub N N 408 PHE C OXT sing N N 409 PHE CB CG sing N N 410 PHE CB HB2 sing N N 411 PHE CB HB3 sing N N 412 PHE CG CD1 doub Y N 413 PHE CG CD2 sing Y N 414 PHE CD1 CE1 sing Y N 415 PHE CD1 HD1 sing N N 416 PHE CD2 CE2 doub Y N 417 PHE CD2 HD2 sing N N 418 PHE CE1 CZ doub Y N 419 PHE CE1 HE1 sing N N 420 PHE CE2 CZ sing Y N 421 PHE CE2 HE2 sing N N 422 PHE CZ HZ sing N N 423 PHE OXT HXT sing N N 424 PO4 P O1 doub N N 425 PO4 P O2 sing N N 426 PO4 P O3 sing N N 427 PO4 P O4 sing N N 428 PRO N CA sing N N 429 PRO N CD sing N N 430 PRO N H sing N N 431 PRO CA C sing N N 432 PRO CA CB sing N N 433 PRO CA HA sing N N 434 PRO C O doub N N 435 PRO C OXT sing N N 436 PRO CB CG sing N N 437 PRO CB HB2 sing N N 438 PRO CB HB3 sing N N 439 PRO CG CD sing N N 440 PRO CG HG2 sing N N 441 PRO CG HG3 sing N N 442 PRO CD HD2 sing N N 443 PRO CD HD3 sing N N 444 PRO OXT HXT sing N N 445 SER N CA sing N N 446 SER N H sing N N 447 SER N H2 sing N N 448 SER CA C sing N N 449 SER CA CB sing N N 450 SER CA HA sing N N 451 SER C O doub N N 452 SER C OXT sing N N 453 SER CB OG sing N N 454 SER CB HB2 sing N N 455 SER CB HB3 sing N N 456 SER OG HG sing N N 457 SER OXT HXT sing N N 458 THR N CA sing N N 459 THR N H sing N N 460 THR N H2 sing N N 461 THR CA C sing N N 462 THR CA CB sing N N 463 THR CA HA sing N N 464 THR C O doub N N 465 THR C OXT sing N N 466 THR CB OG1 sing N N 467 THR CB CG2 sing N N 468 THR CB HB sing N N 469 THR OG1 HG1 sing N N 470 THR CG2 HG21 sing N N 471 THR CG2 HG22 sing N N 472 THR CG2 HG23 sing N N 473 THR OXT HXT sing N N 474 TRP N CA sing N N 475 TRP N H sing N N 476 TRP N H2 sing N N 477 TRP CA C sing N N 478 TRP CA CB sing N N 479 TRP CA HA sing N N 480 TRP C O doub N N 481 TRP C OXT sing N N 482 TRP CB CG sing N N 483 TRP CB HB2 sing N N 484 TRP CB HB3 sing N N 485 TRP CG CD1 doub Y N 486 TRP CG CD2 sing Y N 487 TRP CD1 NE1 sing Y N 488 TRP CD1 HD1 sing N N 489 TRP CD2 CE2 doub Y N 490 TRP CD2 CE3 sing Y N 491 TRP NE1 CE2 sing Y N 492 TRP NE1 HE1 sing N N 493 TRP CE2 CZ2 sing Y N 494 TRP CE3 CZ3 doub Y N 495 TRP CE3 HE3 sing N N 496 TRP CZ2 CH2 doub Y N 497 TRP CZ2 HZ2 sing N N 498 TRP CZ3 CH2 sing Y N 499 TRP CZ3 HZ3 sing N N 500 TRP CH2 HH2 sing N N 501 TRP OXT HXT sing N N 502 TYR N CA sing N N 503 TYR N H sing N N 504 TYR N H2 sing N N 505 TYR CA C sing N N 506 TYR CA CB sing N N 507 TYR CA HA sing N N 508 TYR C O doub N N 509 TYR C OXT sing N N 510 TYR CB CG sing N N 511 TYR CB HB2 sing N N 512 TYR CB HB3 sing N N 513 TYR CG CD1 doub Y N 514 TYR CG CD2 sing Y N 515 TYR CD1 CE1 sing Y N 516 TYR CD1 HD1 sing N N 517 TYR CD2 CE2 doub Y N 518 TYR CD2 HD2 sing N N 519 TYR CE1 CZ doub Y N 520 TYR CE1 HE1 sing N N 521 TYR CE2 CZ sing Y N 522 TYR CE2 HE2 sing N N 523 TYR CZ OH sing N N 524 TYR OH HH sing N N 525 TYR OXT HXT sing N N 526 VAL N CA sing N N 527 VAL N H sing N N 528 VAL N H2 sing N N 529 VAL CA C sing N N 530 VAL CA CB sing N N 531 VAL CA HA sing N N 532 VAL C O doub N N 533 VAL C OXT sing N N 534 VAL CB CG1 sing N N 535 VAL CB CG2 sing N N 536 VAL CB HB sing N N 537 VAL CG1 HG11 sing N N 538 VAL CG1 HG12 sing N N 539 VAL CG1 HG13 sing N N 540 VAL CG2 HG21 sing N N 541 VAL CG2 HG22 sing N N 542 VAL CG2 HG23 sing N N 543 VAL OXT HXT sing N N 544 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 8FIM 'double helix' 8FIM 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 C DT 1 1_555 C DT 13 1_555 -2.272 -1.804 -0.225 -19.822 -0.037 8.147 1 H_DT-7:DT5_H H -7 ? H 5 ? 16 1 1 C DG 2 1_555 C DC 12 1_555 -0.068 -0.131 -0.226 -2.776 -9.430 1.128 2 H_DG-6:DC4_H H -6 ? H 4 ? 19 1 1 C DC 3 1_555 C DG 11 1_555 -0.009 -0.154 -0.314 -6.169 -6.046 2.799 3 H_DC-5:DG3_H H -5 ? H 3 ? 19 1 1 C DG 4 1_555 C DC 10 1_555 0.122 -0.020 -0.264 -7.407 -5.754 4.629 4 H_DG-4:DC2_H H -4 ? H 2 ? 19 1 1 C DC 5 1_555 C DG 9 1_555 0.231 -0.133 -0.557 13.794 7.201 3.702 5 H_DC-3:DG1_H H -3 ? H 1 ? 19 1 1 D DT 1 1_555 D DT 13 1_555 -2.244 -1.804 -0.181 -19.183 1.007 7.214 6 C_DT-7:DT5_C C -7 ? C 5 ? 16 1 1 D DG 2 1_555 D DC 12 1_555 -0.080 -0.136 -0.196 -1.620 -9.658 0.980 7 C_DG-6:DC4_C C -6 ? C 4 ? 19 1 1 D DC 3 1_555 D DG 11 1_555 -0.030 -0.163 -0.311 -5.557 -6.319 2.485 8 C_DC-5:DG3_C C -5 ? C 3 ? 19 1 1 D DG 4 1_555 D DC 10 1_555 0.122 -0.026 -0.286 -5.849 -5.236 4.616 9 C_DG-4:DC2_C C -4 ? C 2 ? 19 1 1 D DC 5 1_555 D DG 9 1_555 0.213 -0.149 -0.650 15.091 6.743 3.521 10 C_DC-3:DG1_C C -3 ? C 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 C DT 1 1_555 C DT 13 1_555 C DG 2 1_555 C DC 12 1_555 -1.017 -0.631 2.937 0.615 0.951 42.411 -0.958 1.461 2.908 1.314 -0.850 42.426 1 HH_DT-7DG-6:DC4DT5_HH H -7 ? H 5 ? H -6 ? H 4 ? 1 C DG 2 1_555 C DC 12 1_555 C DC 3 1_555 C DG 11 1_555 -0.315 -0.664 3.279 1.864 2.097 33.819 -1.472 0.837 3.212 3.596 -3.198 33.931 2 HH_DG-6DC-5:DG3DC4_HH H -6 ? H 4 ? H -5 ? H 3 ? 1 C DC 3 1_555 C DG 11 1_555 C DG 4 1_555 C DC 10 1_555 -0.108 0.586 3.329 0.922 14.176 27.254 -1.866 0.398 3.228 27.816 -1.810 30.672 3 HH_DC-5DG-4:DC2DG3_HH H -5 ? H 3 ? H -4 ? H 2 ? 1 C DG 4 1_555 C DC 10 1_555 C DC 5 1_555 C DG 9 1_555 0.453 0.115 2.756 0.974 3.789 25.368 -0.648 -0.786 2.759 8.564 -2.201 25.663 4 HH_DG-4DC-3:DG1DC2_HH H -4 ? H 2 ? H -3 ? H 1 ? 1 D DT 1 1_555 D DT 13 1_555 D DG 2 1_555 D DC 12 1_555 -1.050 -0.690 2.914 0.298 0.491 42.738 -0.991 1.467 2.899 0.673 -0.409 42.742 5 CC_DT-7DG-6:DC4DT5_CC C -7 ? C 5 ? C -6 ? C 4 ? 1 D DG 2 1_555 D DC 12 1_555 D DC 3 1_555 D DG 11 1_555 -0.333 -0.676 3.300 1.698 2.176 33.564 -1.521 0.851 3.230 3.761 -2.935 33.674 6 CC_DG-6DC-5:DG3DC4_CC C -6 ? C 4 ? C -5 ? C 3 ? 1 D DC 3 1_555 D DG 11 1_555 D DG 4 1_555 D DC 10 1_555 -0.108 0.635 3.320 0.915 14.560 26.561 -1.935 0.405 3.221 29.070 -1.826 30.241 7 CC_DC-5DG-4:DC2DG3_CC C -5 ? C 3 ? C -4 ? C 2 ? 1 D DG 4 1_555 D DC 10 1_555 D DC 5 1_555 D DG 9 1_555 0.439 0.138 2.766 1.602 4.004 24.913 -0.679 -0.605 2.775 9.193 -3.679 25.278 8 CC_DG-4DC-3:DG1DC2_CC C -4 ? C 2 ? C -3 ? C 1 ? # _pdbx_audit_support.funding_organization 'Health Research Council (HRC)' _pdbx_audit_support.country 'New Zealand' _pdbx_audit_support.grant_number 20/1355 _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 5keg _pdbx_initial_refinement_model.details 'Stripped of H2O, Zn2+, Cl-, ssDNA' # _pdbx_related_exp_data_set.ordinal 1 _pdbx_related_exp_data_set.data_reference 10.1002/cbic.201900505 _pdbx_related_exp_data_set.metadata_reference ? _pdbx_related_exp_data_set.data_set_type 'other data' _pdbx_related_exp_data_set.details ? # _atom_sites.entry_id 8FIM _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.018547 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.004478 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017573 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011237 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C CL N O P S ZN # loop_