HEADER HYDROLASE 19-DEC-22 8FJI TITLE CRYSTAL STRUCTURE OF RALA IN A COVALENT COMPLEX WITH SOF-367 COMPND MOL_ID: 1; COMPND 2 MOLECULE: RAS-RELATED PROTEIN RAL-A; COMPND 3 CHAIN: B; COMPND 4 SYNONYM: RALA GTPASE; COMPND 5 EC: 3.6.5.-; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: RALA, RAL; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS RALA, GTPASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR A.D.LANDGRAF,I.-J.YEH,K.BUM-ERDENE,G.GONZALEZ-GUTIERREZ,S.MEROUEH REVDAT 1 06-DEC-23 8FJI 0 JRNL AUTH A.D.LANDGRAF,I.J.YEH,M.K.GHOZAYEL,K.BUM-ERDENE, JRNL AUTH 2 G.GONZALEZ-GUTIERREZ,S.O.MEROUEH JRNL TITL EXPLORING COVALENT BOND FORMATION AT TYR-82 FOR INHIBITION JRNL TITL 2 OF RAL GTPASE ACTIVATION. JRNL REF CHEMMEDCHEM V. 18 00272 2023 JRNL REFN ESSN 1860-7187 JRNL PMID 37269475 JRNL DOI 10.1002/CMDC.202300272 REMARK 2 REMARK 2 RESOLUTION. 1.48 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.48 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 55.07 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 31490 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.185 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.209 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.860 REMARK 3 FREE R VALUE TEST SET COUNT : 1531 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 55.0700 - 3.2900 0.99 2933 120 0.1640 0.1897 REMARK 3 2 3.2900 - 2.6100 1.00 2845 110 0.1637 0.1622 REMARK 3 3 2.6100 - 2.2800 1.00 2771 137 0.1558 0.1838 REMARK 3 4 2.2800 - 2.0700 0.95 2615 134 0.2368 0.2437 REMARK 3 5 2.0700 - 1.9300 0.99 2716 153 0.1763 0.2038 REMARK 3 6 1.9300 - 1.8100 0.91 2491 141 0.2606 0.3044 REMARK 3 7 1.8100 - 1.7200 1.00 2697 188 0.1649 0.1978 REMARK 3 8 1.7200 - 1.6500 1.00 2734 135 0.1801 0.1884 REMARK 3 9 1.6500 - 1.5800 1.00 2735 136 0.1917 0.2454 REMARK 3 10 1.5800 - 1.5300 1.00 2716 139 0.2071 0.2378 REMARK 3 11 1.5300 - 1.4800 0.99 2706 138 0.2312 0.2741 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.149 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.432 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 12.99 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.29 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 1534 REMARK 3 ANGLE : 1.122 2091 REMARK 3 CHIRALITY : 0.075 221 REMARK 3 PLANARITY : 0.007 277 REMARK 3 DIHEDRAL : 13.715 224 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 10 THROUGH 20 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.5013 8.5912 -22.4978 REMARK 3 T TENSOR REMARK 3 T11: 0.1990 T22: 0.1468 REMARK 3 T33: 0.1017 T12: -0.0011 REMARK 3 T13: -0.0280 T23: -0.0252 REMARK 3 L TENSOR REMARK 3 L11: 2.2502 L22: 1.0522 REMARK 3 L33: 2.0648 L12: 0.1826 REMARK 3 L13: 1.4661 L23: 0.7695 REMARK 3 S TENSOR REMARK 3 S11: 0.0701 S12: 0.3641 S13: -0.1527 REMARK 3 S21: -0.3382 S22: 0.0125 S23: 0.1035 REMARK 3 S31: 0.3490 S32: -0.1371 S33: -0.1003 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 21 THROUGH 36 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.9917 15.4970 -9.1927 REMARK 3 T TENSOR REMARK 3 T11: 0.0891 T22: 0.1335 REMARK 3 T33: 0.1209 T12: 0.0005 REMARK 3 T13: -0.0098 T23: -0.0076 REMARK 3 L TENSOR REMARK 3 L11: 1.0218 L22: 0.9014 REMARK 3 L33: 3.0463 L12: -0.5430 REMARK 3 L13: 1.4565 L23: -0.8304 REMARK 3 S TENSOR REMARK 3 S11: -0.0496 S12: -0.0453 S13: 0.1019 REMARK 3 S21: -0.0350 S22: -0.0510 S23: -0.0243 REMARK 3 S31: -0.0307 S32: -0.2426 S33: 0.0834 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 37 THROUGH 48 ) REMARK 3 ORIGIN FOR THE GROUP (A): -30.5386 15.5743 -6.2531 REMARK 3 T TENSOR REMARK 3 T11: 0.1019 T22: 0.2857 REMARK 3 T33: 0.1955 T12: -0.0132 REMARK 3 T13: 0.0062 T23: -0.0249 REMARK 3 L TENSOR REMARK 3 L11: 0.9340 L22: 7.6923 REMARK 3 L33: 2.3467 L12: -0.2484 REMARK 3 L13: 0.2093 L23: -2.6660 REMARK 3 S TENSOR REMARK 3 S11: -0.0306 S12: -0.1832 S13: 0.1350 REMARK 3 S21: 0.0253 S22: 0.1532 S23: 0.7159 REMARK 3 S31: 0.1330 S32: -0.6468 S33: -0.1202 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 49 THROUGH 68 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.7638 13.4307 -22.4541 REMARK 3 T TENSOR REMARK 3 T11: 0.1279 T22: 0.1675 REMARK 3 T33: 0.1309 T12: 0.0106 REMARK 3 T13: -0.0321 T23: -0.0060 REMARK 3 L TENSOR REMARK 3 L11: 2.1224 L22: 3.3896 REMARK 3 L33: 5.4325 L12: 1.8828 REMARK 3 L13: -1.6864 L23: -3.0525 REMARK 3 S TENSOR REMARK 3 S11: -0.0634 S12: 0.2654 S13: 0.0232 REMARK 3 S21: -0.2793 S22: 0.1665 S23: 0.1521 REMARK 3 S31: 0.2287 S32: -0.6666 S33: -0.1046 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 69 THROUGH 85 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.3884 -3.1769 -8.5781 REMARK 3 T TENSOR REMARK 3 T11: 0.1418 T22: 0.1152 REMARK 3 T33: 0.1238 T12: -0.0079 REMARK 3 T13: 0.0090 T23: 0.0174 REMARK 3 L TENSOR REMARK 3 L11: 2.8111 L22: 7.5840 REMARK 3 L33: 1.1006 L12: -1.2443 REMARK 3 L13: 1.6217 L23: 0.3522 REMARK 3 S TENSOR REMARK 3 S11: -0.0463 S12: -0.2419 S13: -0.1523 REMARK 3 S21: 0.0282 S22: 0.1079 S23: 0.3717 REMARK 3 S31: -0.0131 S32: -0.0852 S33: -0.0630 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 86 THROUGH 115 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.1238 7.6270 -3.9241 REMARK 3 T TENSOR REMARK 3 T11: 0.0750 T22: 0.0714 REMARK 3 T33: 0.0894 T12: 0.0053 REMARK 3 T13: 0.0072 T23: 0.0039 REMARK 3 L TENSOR REMARK 3 L11: 0.9752 L22: 1.6256 REMARK 3 L33: 1.6488 L12: -0.1543 REMARK 3 L13: 0.0371 L23: 0.0157 REMARK 3 S TENSOR REMARK 3 S11: -0.0415 S12: -0.0306 S13: -0.0373 REMARK 3 S21: 0.0042 S22: -0.0093 S23: -0.0497 REMARK 3 S31: 0.1007 S32: 0.0114 S33: 0.0341 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 116 THROUGH 127 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.0555 8.0664 -11.7467 REMARK 3 T TENSOR REMARK 3 T11: 0.1265 T22: 0.0671 REMARK 3 T33: 0.1262 T12: 0.0176 REMARK 3 T13: 0.0258 T23: 0.0194 REMARK 3 L TENSOR REMARK 3 L11: 1.6907 L22: 1.0777 REMARK 3 L33: 1.1401 L12: 0.4224 REMARK 3 L13: 1.0311 L23: -0.4428 REMARK 3 S TENSOR REMARK 3 S11: -0.1011 S12: 0.0629 S13: -0.2965 REMARK 3 S21: -0.0825 S22: -0.0130 S23: -0.0574 REMARK 3 S31: 0.1929 S32: 0.2029 S33: 0.0934 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 128 THROUGH 138 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.1190 23.2261 3.9155 REMARK 3 T TENSOR REMARK 3 T11: 0.1162 T22: 0.0863 REMARK 3 T33: 0.1110 T12: 0.0287 REMARK 3 T13: 0.0057 T23: -0.0214 REMARK 3 L TENSOR REMARK 3 L11: 2.3458 L22: 3.6982 REMARK 3 L33: 2.6406 L12: 0.0369 REMARK 3 L13: 2.4419 L23: -0.2404 REMARK 3 S TENSOR REMARK 3 S11: 0.0892 S12: -0.0583 S13: -0.0084 REMARK 3 S21: 0.0831 S22: -0.0336 S23: 0.0094 REMARK 3 S31: -0.0312 S32: -0.0530 S33: -0.0503 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 139 THROUGH 148 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.9017 16.0639 -1.3167 REMARK 3 T TENSOR REMARK 3 T11: 0.0949 T22: 0.1317 REMARK 3 T33: 0.1352 T12: -0.0106 REMARK 3 T13: -0.0178 T23: -0.0141 REMARK 3 L TENSOR REMARK 3 L11: 5.8781 L22: 4.6464 REMARK 3 L33: 7.3886 L12: -3.2134 REMARK 3 L13: -2.4553 L23: 3.8575 REMARK 3 S TENSOR REMARK 3 S11: -0.0591 S12: -0.4842 S13: 0.2155 REMARK 3 S21: 0.0207 S22: 0.2209 S23: -0.2382 REMARK 3 S31: -0.2456 S32: 0.4066 S33: -0.1277 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 149 THROUGH 163 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.7133 19.8984 -7.7452 REMARK 3 T TENSOR REMARK 3 T11: 0.0742 T22: 0.0466 REMARK 3 T33: 0.0581 T12: -0.0080 REMARK 3 T13: -0.0101 T23: -0.0018 REMARK 3 L TENSOR REMARK 3 L11: 6.7803 L22: 5.8446 REMARK 3 L33: 1.7318 L12: -4.5876 REMARK 3 L13: 0.2310 L23: 0.0730 REMARK 3 S TENSOR REMARK 3 S11: 0.0229 S12: 0.0521 S13: 0.1219 REMARK 3 S21: -0.1047 S22: -0.0544 S23: -0.0152 REMARK 3 S31: -0.1699 S32: -0.0614 S33: 0.0198 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 164 THROUGH 179 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.8081 15.4273 -19.2436 REMARK 3 T TENSOR REMARK 3 T11: 0.0887 T22: 0.0581 REMARK 3 T33: 0.0937 T12: 0.0057 REMARK 3 T13: -0.0142 T23: 0.0197 REMARK 3 L TENSOR REMARK 3 L11: 5.8253 L22: 0.9651 REMARK 3 L33: 5.6985 L12: -0.3763 REMARK 3 L13: -1.7569 L23: 0.2224 REMARK 3 S TENSOR REMARK 3 S11: -0.0371 S12: 0.1368 S13: -0.1081 REMARK 3 S21: -0.0830 S22: -0.0529 S23: -0.0907 REMARK 3 S31: 0.0972 S32: -0.0094 S33: 0.0883 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8FJI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-DEC-22. REMARK 100 THE DEPOSITION ID IS D_1000270717. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-MAR-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 4.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97625 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CMOS REMARK 200 DETECTOR MANUFACTURER : RDI CMOS_8M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32302 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.440 REMARK 200 RESOLUTION RANGE LOW (A) : 55.070 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.9 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08400 REMARK 200 FOR THE DATA SET : 14.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.44 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.46 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.3 REMARK 200 DATA REDUNDANCY IN SHELL : 5.30 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.97600 REMARK 200 FOR SHELL : 1.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.59 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CA(AC)2 0.1 M PH 5.5 PEG3350 18-22%, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 27.91150 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 27.91150 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 32.38350 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 52.31500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 32.38350 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 52.31500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 27.91150 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 32.38350 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 52.31500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 27.91150 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 32.38350 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 52.31500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 304 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 412 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 ALA B 3 REMARK 465 ASN B 4 REMARK 465 LYS B 5 REMARK 465 PRO B 6 REMARK 465 LYS B 7 REMARK 465 GLY B 8 REMARK 465 GLN B 9 REMARK 465 GLU B 180 REMARK 465 HIS B 181 REMARK 465 HIS B 182 REMARK 465 HIS B 183 REMARK 465 HIS B 184 REMARK 465 HIS B 185 REMARK 465 HIS B 186 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 ND2 ASN B 10 O HOH B 301 1.85 REMARK 500 O HOH B 371 O HOH B 394 2.08 REMARK 500 OD2 ASP B 74 O HOH B 302 2.09 REMARK 500 O HOH B 446 O HOH B 448 2.14 REMARK 500 O HOH B 352 O HOH B 388 2.16 REMARK 500 OE2 GLU B 97 O HOH B 303 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 318 O HOH B 422 6454 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN B 119 30.40 -98.21 REMARK 500 LYS B 128 37.07 75.58 REMARK 500 LEU B 131 50.24 -111.62 REMARK 500 ARG B 161 0.53 81.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 204 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU B 14 O REMARK 620 2 GLU B 87 OE1 76.3 REMARK 620 3 GLU B 87 OE2 124.1 52.6 REMARK 620 4 HOH B 390 O 88.0 83.8 105.2 REMARK 620 5 HOH B 406 O 160.4 123.2 73.6 95.4 REMARK 620 6 HOH B 430 O 83.7 155.8 150.9 82.1 77.7 REMARK 620 7 HOH B 452 O 85.0 98.2 82.0 172.1 89.9 93.3 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 203 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER B 28 OG REMARK 620 2 GDP B 201 O1B 90.0 REMARK 620 3 HOH B 321 O 90.1 82.8 REMARK 620 4 HOH B 323 O 97.1 163.7 82.6 REMARK 620 5 HOH B 324 O 82.6 90.4 170.1 105.0 REMARK 620 6 HOH B 337 O 175.1 89.8 94.7 84.3 92.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 205 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 37 OD1 REMARK 620 2 ASP B 37 OD2 51.3 REMARK 620 3 HOH B 311 O 111.4 153.5 REMARK 620 4 HOH B 393 O 76.4 71.0 86.1 REMARK 620 5 HOH B 485 O 167.9 116.8 78.5 97.9 REMARK 620 N 1 2 3 4 DBREF 8FJI B 1 178 UNP P11233 RALA_HUMAN 1 178 SEQADV 8FJI LEU B 179 UNP P11233 EXPRESSION TAG SEQADV 8FJI GLU B 180 UNP P11233 EXPRESSION TAG SEQADV 8FJI HIS B 181 UNP P11233 EXPRESSION TAG SEQADV 8FJI HIS B 182 UNP P11233 EXPRESSION TAG SEQADV 8FJI HIS B 183 UNP P11233 EXPRESSION TAG SEQADV 8FJI HIS B 184 UNP P11233 EXPRESSION TAG SEQADV 8FJI HIS B 185 UNP P11233 EXPRESSION TAG SEQADV 8FJI HIS B 186 UNP P11233 EXPRESSION TAG SEQRES 1 B 186 MET ALA ALA ASN LYS PRO LYS GLY GLN ASN SER LEU ALA SEQRES 2 B 186 LEU HIS LYS VAL ILE MET VAL GLY SER GLY GLY VAL GLY SEQRES 3 B 186 LYS SER ALA LEU THR LEU GLN PHE MET TYR ASP GLU PHE SEQRES 4 B 186 VAL GLU ASP TYR GLU PRO THR LYS ALA ASP SER TYR ARG SEQRES 5 B 186 LYS LYS VAL VAL LEU ASP GLY GLU GLU VAL GLN ILE ASP SEQRES 6 B 186 ILE LEU ASP THR ALA GLY GLN GLU ASP TYR ALA ALA ILE SEQRES 7 B 186 ARG ASP ASN TYR PHE ARG SER GLY GLU GLY PHE LEU CYS SEQRES 8 B 186 VAL PHE SER ILE THR GLU MET GLU SER PHE ALA ALA THR SEQRES 9 B 186 ALA ASP PHE ARG GLU GLN ILE LEU ARG VAL LYS GLU ASP SEQRES 10 B 186 GLU ASN VAL PRO PHE LEU LEU VAL GLY ASN LYS SER ASP SEQRES 11 B 186 LEU GLU ASP LYS ARG GLN VAL SER VAL GLU GLU ALA LYS SEQRES 12 B 186 ASN ARG ALA GLU GLN TRP ASN VAL ASN TYR VAL GLU THR SEQRES 13 B 186 SER ALA LYS THR ARG ALA ASN VAL ASP LYS VAL PHE PHE SEQRES 14 B 186 ASP LEU MET ARG GLU ILE ARG ALA ARG LEU GLU HIS HIS SEQRES 15 B 186 HIS HIS HIS HIS HET GDP B 201 40 HET Y0M B 202 38 HET CA B 203 1 HET CA B 204 1 HET CA B 205 1 HETNAM GDP GUANOSINE-5'-DIPHOSPHATE HETNAM Y0M 8-[FLUORO(DIHYDROXY)-LAMBDA~4~-SULFANYL]-N-(2- HETNAM 2 Y0M METHOXYPYRIDIN-3-YL)-2,3-DIHYDRO-1,4-BENZODIOXINE-5- HETNAM 3 Y0M SULFONAMIDE HETNAM CA CALCIUM ION FORMUL 2 GDP C10 H15 N5 O11 P2 FORMUL 3 Y0M C14 H13 F N2 O7 S2 FORMUL 4 CA 3(CA 2+) FORMUL 7 HOH *195(H2 O) HELIX 1 AA1 GLY B 26 ASP B 37 1 12 HELIX 2 AA2 TYR B 75 GLY B 86 1 12 HELIX 3 AA3 GLU B 97 GLU B 116 1 20 HELIX 4 AA4 LEU B 131 ARG B 135 5 5 HELIX 5 AA5 SER B 138 ASN B 150 1 13 HELIX 6 AA6 ASN B 163 LEU B 179 1 17 SHEET 1 AA1 6 ASP B 49 LEU B 57 0 SHEET 2 AA1 6 GLU B 60 ASP B 68 -1 O GLU B 60 N LEU B 57 SHEET 3 AA1 6 ALA B 13 VAL B 20 1 N VAL B 17 O ASP B 65 SHEET 4 AA1 6 GLY B 88 SER B 94 1 O VAL B 92 N VAL B 20 SHEET 5 AA1 6 PHE B 122 ASN B 127 1 O ASN B 127 N PHE B 93 SHEET 6 AA1 6 ASN B 152 GLU B 155 1 O ASN B 152 N LEU B 124 LINK OH TYR B 82 S Y0M B 202 1555 1555 1.63 LINK O LEU B 14 CA CA B 204 1555 1555 2.29 LINK OG SER B 28 CA CA B 203 1555 1555 2.25 LINK OD1BASP B 37 CA CA B 205 1555 1555 2.13 LINK OD2BASP B 37 CA CA B 205 1555 1555 2.75 LINK OE1 GLU B 87 CA CA B 204 1555 1555 2.53 LINK OE2 GLU B 87 CA CA B 204 1555 1555 2.37 LINK O1B GDP B 201 CA CA B 203 1555 1555 2.24 LINK CA CA B 203 O HOH B 321 1555 1555 2.38 LINK CA CA B 203 O HOH B 323 1555 1555 2.24 LINK CA CA B 203 O HOH B 324 1555 1555 2.25 LINK CA CA B 203 O HOH B 337 1555 1555 2.35 LINK CA CA B 204 O HOH B 390 1555 1555 2.32 LINK CA CA B 204 O HOH B 406 1555 1555 2.39 LINK CA CA B 204 O HOH B 430 1555 1555 2.50 LINK CA CA B 204 O HOH B 452 1555 1555 2.28 LINK CA CA B 205 O HOH B 311 1555 1555 2.63 LINK CA CA B 205 O HOH B 393 1555 1555 2.36 LINK CA CA B 205 O HOH B 485 1555 1555 2.10 CRYST1 64.767 104.630 55.823 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015440 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009557 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017914 0.00000