data_8FKM # _entry.id 8FKM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.391 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8FKM pdb_00008fkm 10.2210/pdb8fkm/pdb WWPDB D_1000270971 ? ? BMRB 31065 ? 10.13018/BMR31065 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2023-09-13 2 'Structure model' 1 1 2024-05-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.page_last' 2 2 'Structure model' '_citation.pdbx_database_id_PubMed' 3 2 'Structure model' '_citation.title' 4 2 'Structure model' '_database_2.pdbx_DOI' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 8FKM _pdbx_database_status.recvd_initial_deposition_date 2022-12-21 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs REL _pdbx_database_status.status_code_nmr_data REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name BMRB _pdbx_database_related.details 'Human Atg3 with deletions of residues 1 to 25 and 90 to 190' _pdbx_database_related.db_id 31065 _pdbx_database_related.content_type unspecified # _pdbx_contact_author.id 2 _pdbx_contact_author.email fut10@psu.edu _pdbx_contact_author.name_first Fang _pdbx_contact_author.name_last Tian _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-5881-6155 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Ye, Y.S.' 1 0000-0001-9478-6056 'Tian, F.' 2 0000-0002-5881-6155 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 14 _citation.language ? _citation.page_first 5503 _citation.page_last 5503 _citation.title 'Multifaceted membrane interactions of human Atg3 promote LC3-phosphatidylethanolamine conjugation during autophagy.' _citation.year 2023 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-023-41243-4 _citation.pdbx_database_id_PubMed 37679347 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ye, Y.' 1 ? primary 'Tyndall, E.R.' 2 ? primary 'Bui, V.' 3 ? primary 'Bewley, M.C.' 4 ? primary 'Wang, G.' 5 ? primary 'Hong, X.' 6 ? primary 'Shen, Y.' 7 ? primary 'Flanagan, J.M.' 8 ? primary 'Wang, H.G.' 9 ? primary 'Tian, F.' 10 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Ubiquitin-like-conjugating enzyme ATG3' _entity.formula_weight 22091.420 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Autophagy-related protein 3,APG3-like,hApg3,Protein PC3-96' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEELKVKAYLPTGKQFLVTKNVPCYKRCKQMEEDAILQTRTYDLYIT YDKYYQTPRLWLFGYDEQRQPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGGGELG VHMYLLIFLKFVQAVIPTIEYDYTRHFTM ; _entity_poly.pdbx_seq_one_letter_code_can ;GSKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEELKVKAYLPTGKQFLVTKNVPCYKRCKQMEEDAILQTRTYDLYIT YDKYYQTPRLWLFGYDEQRQPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGGGELG VHMYLLIFLKFVQAVIPTIEYDYTRHFTM ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 LYS n 1 4 PHE n 1 5 LYS n 1 6 GLU n 1 7 THR n 1 8 GLY n 1 9 VAL n 1 10 ILE n 1 11 THR n 1 12 PRO n 1 13 GLU n 1 14 GLU n 1 15 PHE n 1 16 VAL n 1 17 ALA n 1 18 ALA n 1 19 GLY n 1 20 ASP n 1 21 HIS n 1 22 LEU n 1 23 VAL n 1 24 HIS n 1 25 HIS n 1 26 CYS n 1 27 PRO n 1 28 THR n 1 29 TRP n 1 30 GLN n 1 31 TRP n 1 32 ALA n 1 33 THR n 1 34 GLY n 1 35 GLU n 1 36 GLU n 1 37 LEU n 1 38 LYS n 1 39 VAL n 1 40 LYS n 1 41 ALA n 1 42 TYR n 1 43 LEU n 1 44 PRO n 1 45 THR n 1 46 GLY n 1 47 LYS n 1 48 GLN n 1 49 PHE n 1 50 LEU n 1 51 VAL n 1 52 THR n 1 53 LYS n 1 54 ASN n 1 55 VAL n 1 56 PRO n 1 57 CYS n 1 58 TYR n 1 59 LYS n 1 60 ARG n 1 61 CYS n 1 62 LYS n 1 63 GLN n 1 64 MET n 1 65 GLU n 1 66 GLU n 1 67 ASP n 1 68 ALA n 1 69 ILE n 1 70 LEU n 1 71 GLN n 1 72 THR n 1 73 ARG n 1 74 THR n 1 75 TYR n 1 76 ASP n 1 77 LEU n 1 78 TYR n 1 79 ILE n 1 80 THR n 1 81 TYR n 1 82 ASP n 1 83 LYS n 1 84 TYR n 1 85 TYR n 1 86 GLN n 1 87 THR n 1 88 PRO n 1 89 ARG n 1 90 LEU n 1 91 TRP n 1 92 LEU n 1 93 PHE n 1 94 GLY n 1 95 TYR n 1 96 ASP n 1 97 GLU n 1 98 GLN n 1 99 ARG n 1 100 GLN n 1 101 PRO n 1 102 LEU n 1 103 THR n 1 104 VAL n 1 105 GLU n 1 106 HIS n 1 107 MET n 1 108 TYR n 1 109 GLU n 1 110 ASP n 1 111 ILE n 1 112 SER n 1 113 GLN n 1 114 ASP n 1 115 HIS n 1 116 VAL n 1 117 LYS n 1 118 LYS n 1 119 THR n 1 120 VAL n 1 121 THR n 1 122 ILE n 1 123 GLU n 1 124 ASN n 1 125 HIS n 1 126 PRO n 1 127 HIS n 1 128 LEU n 1 129 PRO n 1 130 PRO n 1 131 PRO n 1 132 PRO n 1 133 MET n 1 134 CYS n 1 135 SER n 1 136 VAL n 1 137 HIS n 1 138 PRO n 1 139 CYS n 1 140 ARG n 1 141 HIS n 1 142 ALA n 1 143 GLU n 1 144 VAL n 1 145 MET n 1 146 LYS n 1 147 LYS n 1 148 ILE n 1 149 ILE n 1 150 GLU n 1 151 THR n 1 152 VAL n 1 153 ALA n 1 154 GLU n 1 155 GLY n 1 156 GLY n 1 157 GLY n 1 158 GLU n 1 159 LEU n 1 160 GLY n 1 161 VAL n 1 162 HIS n 1 163 MET n 1 164 TYR n 1 165 LEU n 1 166 LEU n 1 167 ILE n 1 168 PHE n 1 169 LEU n 1 170 LYS n 1 171 PHE n 1 172 VAL n 1 173 GLN n 1 174 ALA n 1 175 VAL n 1 176 ILE n 1 177 PRO n 1 178 THR n 1 179 ILE n 1 180 GLU n 1 181 TYR n 1 182 ASP n 1 183 TYR n 1 184 THR n 1 185 ARG n 1 186 HIS n 1 187 PHE n 1 188 THR n 1 189 MET n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 189 _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'ATG3, APG3, APG3L' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 25 25 GLY GLY A . n A 1 2 SER 2 26 26 SER SER A . n A 1 3 LYS 3 27 27 LYS LYS A . n A 1 4 PHE 4 28 28 PHE PHE A . n A 1 5 LYS 5 29 29 LYS LYS A . n A 1 6 GLU 6 30 30 GLU GLU A . n A 1 7 THR 7 31 31 THR THR A . n A 1 8 GLY 8 32 32 GLY GLY A . n A 1 9 VAL 9 33 33 VAL VAL A . n A 1 10 ILE 10 34 34 ILE ILE A . n A 1 11 THR 11 35 35 THR THR A . n A 1 12 PRO 12 36 36 PRO PRO A . n A 1 13 GLU 13 37 37 GLU GLU A . n A 1 14 GLU 14 38 38 GLU GLU A . n A 1 15 PHE 15 39 39 PHE PHE A . n A 1 16 VAL 16 40 40 VAL VAL A . n A 1 17 ALA 17 41 41 ALA ALA A . n A 1 18 ALA 18 42 42 ALA ALA A . n A 1 19 GLY 19 43 43 GLY GLY A . n A 1 20 ASP 20 44 44 ASP ASP A . n A 1 21 HIS 21 45 45 HIS HIS A . n A 1 22 LEU 22 46 46 LEU LEU A . n A 1 23 VAL 23 47 47 VAL VAL A . n A 1 24 HIS 24 48 48 HIS HIS A . n A 1 25 HIS 25 49 49 HIS HIS A . n A 1 26 CYS 26 50 50 CYS CYS A . n A 1 27 PRO 27 51 51 PRO PRO A . n A 1 28 THR 28 52 52 THR THR A . n A 1 29 TRP 29 53 53 TRP TRP A . n A 1 30 GLN 30 54 54 GLN GLN A . n A 1 31 TRP 31 55 55 TRP TRP A . n A 1 32 ALA 32 56 56 ALA ALA A . n A 1 33 THR 33 57 57 THR THR A . n A 1 34 GLY 34 58 58 GLY GLY A . n A 1 35 GLU 35 59 59 GLU GLU A . n A 1 36 GLU 36 60 60 GLU GLU A . n A 1 37 LEU 37 61 61 LEU LEU A . n A 1 38 LYS 38 62 62 LYS LYS A . n A 1 39 VAL 39 63 63 VAL VAL A . n A 1 40 LYS 40 64 64 LYS LYS A . n A 1 41 ALA 41 65 65 ALA ALA A . n A 1 42 TYR 42 66 66 TYR TYR A . n A 1 43 LEU 43 67 67 LEU LEU A . n A 1 44 PRO 44 68 68 PRO PRO A . n A 1 45 THR 45 69 69 THR THR A . n A 1 46 GLY 46 70 70 GLY GLY A . n A 1 47 LYS 47 71 71 LYS LYS A . n A 1 48 GLN 48 72 72 GLN GLN A . n A 1 49 PHE 49 73 73 PHE PHE A . n A 1 50 LEU 50 74 74 LEU LEU A . n A 1 51 VAL 51 75 75 VAL VAL A . n A 1 52 THR 52 76 76 THR THR A . n A 1 53 LYS 53 77 77 LYS LYS A . n A 1 54 ASN 54 78 78 ASN ASN A . n A 1 55 VAL 55 79 79 VAL VAL A . n A 1 56 PRO 56 80 80 PRO PRO A . n A 1 57 CYS 57 81 81 CYS CYS A . n A 1 58 TYR 58 82 82 TYR TYR A . n A 1 59 LYS 59 83 83 LYS LYS A . n A 1 60 ARG 60 84 84 ARG ARG A . n A 1 61 CYS 61 85 85 CYS CYS A . n A 1 62 LYS 62 86 86 LYS LYS A . n A 1 63 GLN 63 87 87 GLN GLN A . n A 1 64 MET 64 88 88 MET MET A . n A 1 65 GLU 65 89 89 GLU GLU A . n A 1 66 GLU 66 191 191 GLU GLU A . n A 1 67 ASP 67 192 192 ASP ASP A . n A 1 68 ALA 68 193 193 ALA ALA A . n A 1 69 ILE 69 194 194 ILE ILE A . n A 1 70 LEU 70 195 195 LEU LEU A . n A 1 71 GLN 71 196 196 GLN GLN A . n A 1 72 THR 72 197 197 THR THR A . n A 1 73 ARG 73 198 198 ARG ARG A . n A 1 74 THR 74 199 199 THR THR A . n A 1 75 TYR 75 200 200 TYR TYR A . n A 1 76 ASP 76 201 201 ASP ASP A . n A 1 77 LEU 77 202 202 LEU LEU A . n A 1 78 TYR 78 203 203 TYR TYR A . n A 1 79 ILE 79 204 204 ILE ILE A . n A 1 80 THR 80 205 205 THR THR A . n A 1 81 TYR 81 206 206 TYR TYR A . n A 1 82 ASP 82 207 207 ASP ASP A . n A 1 83 LYS 83 208 208 LYS LYS A . n A 1 84 TYR 84 209 209 TYR TYR A . n A 1 85 TYR 85 210 210 TYR TYR A . n A 1 86 GLN 86 211 211 GLN GLN A . n A 1 87 THR 87 212 212 THR THR A . n A 1 88 PRO 88 213 213 PRO PRO A . n A 1 89 ARG 89 214 214 ARG ARG A . n A 1 90 LEU 90 215 215 LEU LEU A . n A 1 91 TRP 91 216 216 TRP TRP A . n A 1 92 LEU 92 217 217 LEU LEU A . n A 1 93 PHE 93 218 218 PHE PHE A . n A 1 94 GLY 94 219 219 GLY GLY A . n A 1 95 TYR 95 220 220 TYR TYR A . n A 1 96 ASP 96 221 221 ASP ASP A . n A 1 97 GLU 97 222 222 GLU GLU A . n A 1 98 GLN 98 223 223 GLN GLN A . n A 1 99 ARG 99 224 224 ARG ARG A . n A 1 100 GLN 100 225 225 GLN GLN A . n A 1 101 PRO 101 226 226 PRO PRO A . n A 1 102 LEU 102 227 227 LEU LEU A . n A 1 103 THR 103 228 228 THR THR A . n A 1 104 VAL 104 229 229 VAL VAL A . n A 1 105 GLU 105 230 230 GLU GLU A . n A 1 106 HIS 106 231 231 HIS HIS A . n A 1 107 MET 107 232 232 MET MET A . n A 1 108 TYR 108 233 233 TYR TYR A . n A 1 109 GLU 109 234 234 GLU GLU A . n A 1 110 ASP 110 235 235 ASP ASP A . n A 1 111 ILE 111 236 236 ILE ILE A . n A 1 112 SER 112 237 237 SER SER A . n A 1 113 GLN 113 238 238 GLN GLN A . n A 1 114 ASP 114 239 239 ASP ASP A . n A 1 115 HIS 115 240 240 HIS HIS A . n A 1 116 VAL 116 241 241 VAL VAL A . n A 1 117 LYS 117 242 242 LYS LYS A . n A 1 118 LYS 118 243 243 LYS LYS A . n A 1 119 THR 119 244 244 THR THR A . n A 1 120 VAL 120 245 245 VAL VAL A . n A 1 121 THR 121 246 246 THR THR A . n A 1 122 ILE 122 247 247 ILE ILE A . n A 1 123 GLU 123 248 248 GLU GLU A . n A 1 124 ASN 124 249 249 ASN ASN A . n A 1 125 HIS 125 250 250 HIS HIS A . n A 1 126 PRO 126 251 251 PRO PRO A . n A 1 127 HIS 127 252 252 HIS HIS A . n A 1 128 LEU 128 253 253 LEU LEU A . n A 1 129 PRO 129 254 254 PRO PRO A . n A 1 130 PRO 130 255 255 PRO PRO A . n A 1 131 PRO 131 256 256 PRO PRO A . n A 1 132 PRO 132 257 257 PRO PRO A . n A 1 133 MET 133 258 258 MET MET A . n A 1 134 CYS 134 259 259 CYS CYS A . n A 1 135 SER 135 260 260 SER SER A . n A 1 136 VAL 136 261 261 VAL VAL A . n A 1 137 HIS 137 262 262 HIS HIS A . n A 1 138 PRO 138 263 263 PRO PRO A . n A 1 139 CYS 139 264 264 CYS CYS A . n A 1 140 ARG 140 265 265 ARG ARG A . n A 1 141 HIS 141 266 266 HIS HIS A . n A 1 142 ALA 142 267 267 ALA ALA A . n A 1 143 GLU 143 268 268 GLU GLU A . n A 1 144 VAL 144 269 269 VAL VAL A . n A 1 145 MET 145 270 270 MET MET A . n A 1 146 LYS 146 271 271 LYS LYS A . n A 1 147 LYS 147 272 272 LYS LYS A . n A 1 148 ILE 148 273 273 ILE ILE A . n A 1 149 ILE 149 274 274 ILE ILE A . n A 1 150 GLU 150 275 275 GLU GLU A . n A 1 151 THR 151 276 276 THR THR A . n A 1 152 VAL 152 277 277 VAL VAL A . n A 1 153 ALA 153 278 278 ALA ALA A . n A 1 154 GLU 154 279 279 GLU GLU A . n A 1 155 GLY 155 280 280 GLY GLY A . n A 1 156 GLY 156 281 281 GLY GLY A . n A 1 157 GLY 157 282 282 GLY GLY A . n A 1 158 GLU 158 283 283 GLU GLU A . n A 1 159 LEU 159 284 284 LEU LEU A . n A 1 160 GLY 160 285 285 GLY GLY A . n A 1 161 VAL 161 286 286 VAL VAL A . n A 1 162 HIS 162 287 287 HIS HIS A . n A 1 163 MET 163 288 288 MET MET A . n A 1 164 TYR 164 289 289 TYR TYR A . n A 1 165 LEU 165 290 290 LEU LEU A . n A 1 166 LEU 166 291 291 LEU LEU A . n A 1 167 ILE 167 292 292 ILE ILE A . n A 1 168 PHE 168 293 293 PHE PHE A . n A 1 169 LEU 169 294 294 LEU LEU A . n A 1 170 LYS 170 295 295 LYS LYS A . n A 1 171 PHE 171 296 296 PHE PHE A . n A 1 172 VAL 172 297 297 VAL VAL A . n A 1 173 GLN 173 298 298 GLN GLN A . n A 1 174 ALA 174 299 299 ALA ALA A . n A 1 175 VAL 175 300 300 VAL VAL A . n A 1 176 ILE 176 301 301 ILE ILE A . n A 1 177 PRO 177 302 302 PRO PRO A . n A 1 178 THR 178 303 303 THR THR A . n A 1 179 ILE 179 304 304 ILE ILE A . n A 1 180 GLU 180 305 305 GLU GLU A . n A 1 181 TYR 181 306 306 TYR TYR A . n A 1 182 ASP 182 307 307 ASP ASP A . n A 1 183 TYR 183 308 308 TYR TYR A . n A 1 184 THR 184 309 309 THR THR A . n A 1 185 ARG 185 310 310 ARG ARG A . n A 1 186 HIS 186 311 311 HIS HIS A . n A 1 187 PHE 187 312 312 PHE PHE A . n A 1 188 THR 188 313 313 THR THR A . n A 1 189 MET 189 314 314 MET MET A . n # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8FKM _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 8FKM _struct.title 'Human Atg3 with deletions of residues 1 to 25 and 90 to 190' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8FKM _struct_keywords.text 'Conjugase, Atg3, Autophagy, LIGASE' _struct_keywords.pdbx_keywords LIGASE # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code ATG3_HUMAN _struct_ref.pdbx_db_accession Q9NT62 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MQNVINTVKGKALEVAEYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEELKVKAYLPTGKQFLVTKNVP CYKRCKQMEYSDELEAIIEEDDGDGGWVDTYHNTGITGITEAVKEITLENKDNIRLQDCSALCEEEEDEDEGEAADMEEY EESGLLETDEATLDTRKIVEACKAKTDAGGEDAILQTRTYDLYITYDKYYQTPRLWLFGYDEQRQPLTVEHMYEDISQDH VKKTVTIENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGGGELGVHMYLLIFLKFVQAVIPTIEYDYTRHFTM ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 8FKM _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 189 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9NT62 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 314 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg ? _struct_ref_seq.pdbx_auth_seq_align_end 314 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 8FKM ? A ? ? UNP Q9NT62 MET 1 deletion ? 1 1 8FKM ? A ? ? UNP Q9NT62 GLN 2 deletion ? 2 1 8FKM ? A ? ? UNP Q9NT62 ASN 3 deletion ? 3 1 8FKM ? A ? ? UNP Q9NT62 VAL 4 deletion ? 4 1 8FKM ? A ? ? UNP Q9NT62 ILE 5 deletion ? 5 1 8FKM ? A ? ? UNP Q9NT62 ASN 6 deletion ? 6 1 8FKM ? A ? ? UNP Q9NT62 THR 7 deletion ? 7 1 8FKM ? A ? ? UNP Q9NT62 VAL 8 deletion ? 8 1 8FKM ? A ? ? UNP Q9NT62 LYS 9 deletion ? 9 1 8FKM ? A ? ? UNP Q9NT62 GLY 10 deletion ? 10 1 8FKM ? A ? ? UNP Q9NT62 LYS 11 deletion ? 11 1 8FKM ? A ? ? UNP Q9NT62 ALA 12 deletion ? 12 1 8FKM ? A ? ? UNP Q9NT62 LEU 13 deletion ? 13 1 8FKM ? A ? ? UNP Q9NT62 GLU 14 deletion ? 14 1 8FKM ? A ? ? UNP Q9NT62 VAL 15 deletion ? 15 1 8FKM ? A ? ? UNP Q9NT62 ALA 16 deletion ? 16 1 8FKM ? A ? ? UNP Q9NT62 GLU 17 deletion ? 17 1 8FKM ? A ? ? UNP Q9NT62 TYR 18 deletion ? 18 1 8FKM ? A ? ? UNP Q9NT62 LEU 19 deletion ? 19 1 8FKM ? A ? ? UNP Q9NT62 THR 20 deletion ? 20 1 8FKM ? A ? ? UNP Q9NT62 PRO 21 deletion ? 21 1 8FKM ? A ? ? UNP Q9NT62 VAL 22 deletion ? 22 1 8FKM ? A ? ? UNP Q9NT62 LEU 23 deletion ? 23 1 8FKM ? A ? ? UNP Q9NT62 LYS 24 deletion ? 24 1 8FKM GLY A 1 ? UNP Q9NT62 GLU 25 conflict 25 25 1 8FKM ? A ? ? UNP Q9NT62 TYR 90 deletion ? 26 1 8FKM ? A ? ? UNP Q9NT62 SER 91 deletion ? 27 1 8FKM ? A ? ? UNP Q9NT62 ASP 92 deletion ? 28 1 8FKM ? A ? ? UNP Q9NT62 GLU 93 deletion ? 29 1 8FKM ? A ? ? UNP Q9NT62 LEU 94 deletion ? 30 1 8FKM ? A ? ? UNP Q9NT62 GLU 95 deletion ? 31 1 8FKM ? A ? ? UNP Q9NT62 ALA 96 deletion ? 32 1 8FKM ? A ? ? UNP Q9NT62 ILE 97 deletion ? 33 1 8FKM ? A ? ? UNP Q9NT62 ILE 98 deletion ? 34 1 8FKM ? A ? ? UNP Q9NT62 GLU 99 deletion ? 35 1 8FKM ? A ? ? UNP Q9NT62 GLU 100 deletion ? 36 1 8FKM ? A ? ? UNP Q9NT62 ASP 101 deletion ? 37 1 8FKM ? A ? ? UNP Q9NT62 ASP 102 deletion ? 38 1 8FKM ? A ? ? UNP Q9NT62 GLY 103 deletion ? 39 1 8FKM ? A ? ? UNP Q9NT62 ASP 104 deletion ? 40 1 8FKM ? A ? ? UNP Q9NT62 GLY 105 deletion ? 41 1 8FKM ? A ? ? UNP Q9NT62 GLY 106 deletion ? 42 1 8FKM ? A ? ? UNP Q9NT62 TRP 107 deletion ? 43 1 8FKM ? A ? ? UNP Q9NT62 VAL 108 deletion ? 44 1 8FKM ? A ? ? UNP Q9NT62 ASP 109 deletion ? 45 1 8FKM ? A ? ? UNP Q9NT62 THR 110 deletion ? 46 1 8FKM ? A ? ? UNP Q9NT62 TYR 111 deletion ? 47 1 8FKM ? A ? ? UNP Q9NT62 HIS 112 deletion ? 48 1 8FKM ? A ? ? UNP Q9NT62 ASN 113 deletion ? 49 1 8FKM ? A ? ? UNP Q9NT62 THR 114 deletion ? 50 1 8FKM ? A ? ? UNP Q9NT62 GLY 115 deletion ? 51 1 8FKM ? A ? ? UNP Q9NT62 ILE 116 deletion ? 52 1 8FKM ? A ? ? UNP Q9NT62 THR 117 deletion ? 53 1 8FKM ? A ? ? UNP Q9NT62 GLY 118 deletion ? 54 1 8FKM ? A ? ? UNP Q9NT62 ILE 119 deletion ? 55 1 8FKM ? A ? ? UNP Q9NT62 THR 120 deletion ? 56 1 8FKM ? A ? ? UNP Q9NT62 GLU 121 deletion ? 57 1 8FKM ? A ? ? UNP Q9NT62 ALA 122 deletion ? 58 1 8FKM ? A ? ? UNP Q9NT62 VAL 123 deletion ? 59 1 8FKM ? A ? ? UNP Q9NT62 LYS 124 deletion ? 60 1 8FKM ? A ? ? UNP Q9NT62 GLU 125 deletion ? 61 1 8FKM ? A ? ? UNP Q9NT62 ILE 126 deletion ? 62 1 8FKM ? A ? ? UNP Q9NT62 THR 127 deletion ? 63 1 8FKM ? A ? ? UNP Q9NT62 LEU 128 deletion ? 64 1 8FKM ? A ? ? UNP Q9NT62 GLU 129 deletion ? 65 1 8FKM ? A ? ? UNP Q9NT62 ASN 130 deletion ? 66 1 8FKM ? A ? ? UNP Q9NT62 LYS 131 deletion ? 67 1 8FKM ? A ? ? UNP Q9NT62 ASP 132 deletion ? 68 1 8FKM ? A ? ? UNP Q9NT62 ASN 133 deletion ? 69 1 8FKM ? A ? ? UNP Q9NT62 ILE 134 deletion ? 70 1 8FKM ? A ? ? UNP Q9NT62 ARG 135 deletion ? 71 1 8FKM ? A ? ? UNP Q9NT62 LEU 136 deletion ? 72 1 8FKM ? A ? ? UNP Q9NT62 GLN 137 deletion ? 73 1 8FKM ? A ? ? UNP Q9NT62 ASP 138 deletion ? 74 1 8FKM ? A ? ? UNP Q9NT62 CYS 139 deletion ? 75 1 8FKM ? A ? ? UNP Q9NT62 SER 140 deletion ? 76 1 8FKM ? A ? ? UNP Q9NT62 ALA 141 deletion ? 77 1 8FKM ? A ? ? UNP Q9NT62 LEU 142 deletion ? 78 1 8FKM ? A ? ? UNP Q9NT62 CYS 143 deletion ? 79 1 8FKM ? A ? ? UNP Q9NT62 GLU 144 deletion ? 80 1 8FKM ? A ? ? UNP Q9NT62 GLU 145 deletion ? 81 1 8FKM ? A ? ? UNP Q9NT62 GLU 146 deletion ? 82 1 8FKM ? A ? ? UNP Q9NT62 GLU 147 deletion ? 83 1 8FKM ? A ? ? UNP Q9NT62 ASP 148 deletion ? 84 1 8FKM ? A ? ? UNP Q9NT62 GLU 149 deletion ? 85 1 8FKM ? A ? ? UNP Q9NT62 ASP 150 deletion ? 86 1 8FKM ? A ? ? UNP Q9NT62 GLU 151 deletion ? 87 1 8FKM ? A ? ? UNP Q9NT62 GLY 152 deletion ? 88 1 8FKM ? A ? ? UNP Q9NT62 GLU 153 deletion ? 89 1 8FKM ? A ? ? UNP Q9NT62 ALA 154 deletion ? 90 1 8FKM ? A ? ? UNP Q9NT62 ALA 155 deletion ? 91 1 8FKM ? A ? ? UNP Q9NT62 ASP 156 deletion ? 92 1 8FKM ? A ? ? UNP Q9NT62 MET 157 deletion ? 93 1 8FKM ? A ? ? UNP Q9NT62 GLU 158 deletion ? 94 1 8FKM ? A ? ? UNP Q9NT62 GLU 159 deletion ? 95 1 8FKM ? A ? ? UNP Q9NT62 TYR 160 deletion ? 96 1 8FKM ? A ? ? UNP Q9NT62 GLU 161 deletion ? 97 1 8FKM ? A ? ? UNP Q9NT62 GLU 162 deletion ? 98 1 8FKM ? A ? ? UNP Q9NT62 SER 163 deletion ? 99 1 8FKM ? A ? ? UNP Q9NT62 GLY 164 deletion ? 100 1 8FKM ? A ? ? UNP Q9NT62 LEU 165 deletion ? 101 1 8FKM ? A ? ? UNP Q9NT62 LEU 166 deletion ? 102 1 8FKM ? A ? ? UNP Q9NT62 GLU 167 deletion ? 103 1 8FKM ? A ? ? UNP Q9NT62 THR 168 deletion ? 104 1 8FKM ? A ? ? UNP Q9NT62 ASP 169 deletion ? 105 1 8FKM ? A ? ? UNP Q9NT62 GLU 170 deletion ? 106 1 8FKM ? A ? ? UNP Q9NT62 ALA 171 deletion ? 107 1 8FKM ? A ? ? UNP Q9NT62 THR 172 deletion ? 108 1 8FKM ? A ? ? UNP Q9NT62 LEU 173 deletion ? 109 1 8FKM ? A ? ? UNP Q9NT62 ASP 174 deletion ? 110 1 8FKM ? A ? ? UNP Q9NT62 THR 175 deletion ? 111 1 8FKM ? A ? ? UNP Q9NT62 ARG 176 deletion ? 112 1 8FKM ? A ? ? UNP Q9NT62 LYS 177 deletion ? 113 1 8FKM ? A ? ? UNP Q9NT62 ILE 178 deletion ? 114 1 8FKM ? A ? ? UNP Q9NT62 VAL 179 deletion ? 115 1 8FKM ? A ? ? UNP Q9NT62 GLU 180 deletion ? 116 1 8FKM ? A ? ? UNP Q9NT62 ALA 181 deletion ? 117 1 8FKM ? A ? ? UNP Q9NT62 CYS 182 deletion ? 118 1 8FKM ? A ? ? UNP Q9NT62 LYS 183 deletion ? 119 1 8FKM ? A ? ? UNP Q9NT62 ALA 184 deletion ? 120 1 8FKM ? A ? ? UNP Q9NT62 LYS 185 deletion ? 121 1 8FKM ? A ? ? UNP Q9NT62 THR 186 deletion ? 122 1 8FKM ? A ? ? UNP Q9NT62 ASP 187 deletion ? 123 1 8FKM ? A ? ? UNP Q9NT62 ALA 188 deletion ? 124 1 8FKM ? A ? ? UNP Q9NT62 GLY 189 deletion ? 125 1 8FKM ? A ? ? UNP Q9NT62 GLY 190 deletion ? 126 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 11 ? CYS A 26 ? THR A 35 CYS A 50 1 ? 16 HELX_P HELX_P2 AA2 PRO A 44 ? GLN A 48 ? PRO A 68 GLN A 72 5 ? 5 HELX_P HELX_P3 AA3 THR A 103 ? TYR A 108 ? THR A 228 TYR A 233 1 ? 6 HELX_P HELX_P4 AA4 GLU A 109 ? ILE A 111 ? GLU A 234 ILE A 236 5 ? 3 HELX_P HELX_P5 AA5 SER A 112 ? LYS A 117 ? SER A 237 LYS A 242 1 ? 6 HELX_P HELX_P6 AA6 HIS A 141 ? GLU A 154 ? HIS A 266 GLU A 279 1 ? 14 HELX_P HELX_P7 AA7 GLY A 160 ? HIS A 162 ? GLY A 285 HIS A 287 5 ? 3 HELX_P HELX_P8 AA8 MET A 163 ? ALA A 174 ? MET A 288 ALA A 299 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 PRO 130 A . ? PRO 255 A PRO 131 A ? PRO 256 A 1 0.15 2 PRO 130 A . ? PRO 255 A PRO 131 A ? PRO 256 A 2 -0.03 3 PRO 130 A . ? PRO 255 A PRO 131 A ? PRO 256 A 3 -0.31 4 PRO 130 A . ? PRO 255 A PRO 131 A ? PRO 256 A 4 -1.09 5 PRO 130 A . ? PRO 255 A PRO 131 A ? PRO 256 A 5 0.38 6 PRO 130 A . ? PRO 255 A PRO 131 A ? PRO 256 A 6 0.13 7 PRO 130 A . ? PRO 255 A PRO 131 A ? PRO 256 A 7 -0.63 8 PRO 130 A . ? PRO 255 A PRO 131 A ? PRO 256 A 8 -0.68 9 PRO 130 A . ? PRO 255 A PRO 131 A ? PRO 256 A 9 -0.15 10 PRO 130 A . ? PRO 255 A PRO 131 A ? PRO 256 A 10 -0.79 # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLN A 30 ? ALA A 32 ? GLN A 54 ALA A 56 AA1 2 PHE A 49 ? VAL A 55 ? PHE A 73 VAL A 79 AA1 3 THR A 74 ? ASP A 82 ? THR A 199 ASP A 207 AA1 4 THR A 87 ? TYR A 95 ? THR A 212 TYR A 220 AA1 5 MET A 133 ? VAL A 136 ? MET A 258 VAL A 261 AA1 6 VAL A 120 ? GLU A 123 ? VAL A 245 GLU A 248 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ALA A 32 ? N ALA A 56 O PHE A 49 ? O PHE A 73 AA1 2 3 N THR A 52 ? N THR A 76 O LEU A 77 ? O LEU A 202 AA1 3 4 N ASP A 76 ? N ASP A 201 O PHE A 93 ? O PHE A 218 AA1 4 5 N LEU A 92 ? N LEU A 217 O CYS A 134 ? O CYS A 259 AA1 5 6 O MET A 133 ? O MET A 258 N GLU A 123 ? N GLU A 248 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 86 ? ? -130.94 -140.31 2 1 MET A 88 ? ? -136.05 -159.83 3 1 ALA A 193 ? ? -54.78 -80.87 4 1 ILE A 194 ? ? -26.79 143.14 5 1 LEU A 195 ? ? -169.65 23.95 6 1 CYS A 264 ? ? 73.44 -2.66 7 1 GLU A 283 ? ? 48.47 -169.13 8 1 TYR A 308 ? ? -168.51 46.96 9 1 THR A 309 ? ? 73.03 -30.32 10 1 HIS A 311 ? ? 64.10 132.13 11 1 THR A 313 ? ? 57.86 -78.68 12 2 GLU A 30 ? ? -98.89 -60.04 13 2 ARG A 84 ? ? -79.18 -165.61 14 2 GLN A 87 ? ? -105.55 44.92 15 2 MET A 88 ? ? -65.89 -167.16 16 2 GLU A 89 ? ? -49.17 160.13 17 2 LEU A 195 ? ? -164.60 8.00 18 2 SER A 237 ? ? -51.02 98.30 19 2 GLU A 283 ? ? 67.88 -73.60 20 2 TYR A 308 ? ? -147.11 -112.27 21 2 ARG A 310 ? ? 59.07 -86.21 22 2 PHE A 312 ? ? -128.70 -168.52 23 3 LYS A 86 ? ? -133.86 -138.09 24 3 GLN A 87 ? ? -75.50 -123.67 25 3 MET A 88 ? ? 40.16 -161.87 26 3 ALA A 193 ? ? -47.75 -83.67 27 3 ILE A 194 ? ? 46.87 141.04 28 3 SER A 237 ? ? -56.66 95.65 29 3 PRO A 263 ? ? -82.13 44.78 30 3 ARG A 265 ? ? -71.20 -79.49 31 3 TYR A 308 ? ? -141.83 -116.51 32 3 ARG A 310 ? ? 56.83 -90.04 33 4 GLU A 30 ? ? -96.66 -61.46 34 4 ARG A 84 ? ? -110.37 -164.25 35 4 MET A 88 ? ? 41.90 -160.29 36 4 SER A 237 ? ? -51.05 97.69 37 4 CYS A 264 ? ? -56.85 -167.48 38 4 GLU A 283 ? ? 54.36 -86.36 39 4 THR A 309 ? ? 39.80 -89.50 40 4 ARG A 310 ? ? 67.97 145.08 41 5 LYS A 86 ? ? -100.87 -64.09 42 5 GLN A 87 ? ? 133.50 100.45 43 5 MET A 88 ? ? -159.15 -90.64 44 5 ILE A 194 ? ? -71.91 -79.25 45 5 LEU A 195 ? ? 72.24 -20.03 46 5 LYS A 243 ? ? -93.57 -60.48 47 5 CYS A 264 ? ? -125.96 -168.96 48 5 HIS A 266 ? ? 23.04 54.93 49 5 ASP A 307 ? ? -49.89 -83.81 50 5 TYR A 308 ? ? 29.07 -93.00 51 5 THR A 309 ? ? 154.57 123.85 52 5 HIS A 311 ? ? 179.57 63.07 53 5 THR A 313 ? ? 15.37 63.37 54 6 LYS A 86 ? ? -69.04 -163.33 55 6 GLN A 87 ? ? -130.19 -102.14 56 6 MET A 88 ? ? 62.29 -138.85 57 6 GLU A 89 ? ? -48.85 163.38 58 6 ILE A 194 ? ? 169.67 121.89 59 6 ARG A 198 ? ? -129.95 -166.77 60 6 SER A 237 ? ? -51.29 100.00 61 6 HIS A 262 ? ? 170.95 -50.20 62 6 ARG A 265 ? ? -61.58 -70.97 63 6 GLU A 283 ? ? 64.68 171.43 64 6 TYR A 308 ? ? -147.16 -104.73 65 6 THR A 313 ? ? 50.76 19.78 66 7 CYS A 85 ? ? -38.65 -35.77 67 7 LYS A 86 ? ? -171.84 -124.52 68 7 GLN A 87 ? ? 83.22 144.68 69 7 MET A 88 ? ? -58.95 -167.94 70 7 GLU A 89 ? ? 33.41 155.91 71 7 SER A 237 ? ? -51.19 104.02 72 7 PRO A 263 ? ? -64.70 80.13 73 7 CYS A 264 ? ? 45.64 -165.43 74 7 GLU A 283 ? ? -49.36 99.17 75 7 PRO A 302 ? ? -67.75 0.68 76 7 GLU A 305 ? ? -111.78 74.39 77 7 TYR A 306 ? ? -56.79 175.44 78 7 ASP A 307 ? ? -66.27 -74.45 79 7 TYR A 308 ? ? 27.12 -79.29 80 7 THR A 309 ? ? 160.47 122.61 81 7 PHE A 312 ? ? -47.85 168.27 82 7 THR A 313 ? ? 49.35 23.86 83 8 LYS A 86 ? ? -101.19 -79.15 84 8 GLN A 87 ? ? -179.11 -43.11 85 8 MET A 88 ? ? -22.85 -90.37 86 8 ALA A 193 ? ? -64.27 15.66 87 8 LEU A 195 ? ? -146.43 -15.29 88 8 SER A 237 ? ? -49.23 100.00 89 8 HIS A 252 ? ? -170.36 13.84 90 8 HIS A 262 ? ? -167.62 75.09 91 8 GLU A 283 ? ? 35.58 -91.49 92 8 LEU A 284 ? ? -99.26 36.94 93 8 TYR A 308 ? ? -139.56 -109.10 94 8 THR A 309 ? ? -177.27 -51.85 95 8 ARG A 310 ? ? 62.26 100.97 96 8 HIS A 311 ? ? 69.78 154.83 97 9 LYS A 86 ? ? -70.70 -117.31 98 9 GLN A 87 ? ? -156.70 -68.63 99 9 MET A 88 ? ? 51.52 -172.18 100 9 ILE A 194 ? ? -63.54 -78.10 101 9 LEU A 195 ? ? 78.13 -20.03 102 9 SER A 237 ? ? -56.04 96.19 103 9 HIS A 262 ? ? -174.62 60.33 104 9 ARG A 265 ? ? -51.61 -79.36 105 9 TYR A 308 ? ? -171.14 54.51 106 9 THR A 309 ? ? 54.25 70.26 107 9 HIS A 311 ? ? -111.48 -78.38 108 9 PHE A 312 ? ? 70.91 -66.02 109 10 GLU A 30 ? ? -95.39 -61.98 110 10 LYS A 86 ? ? 174.66 137.25 111 10 GLN A 87 ? ? 52.57 -152.80 112 10 MET A 88 ? ? 45.48 -158.18 113 10 LEU A 195 ? ? -176.05 17.81 114 10 SER A 237 ? ? -61.59 95.86 115 10 CYS A 264 ? ? 174.84 41.85 116 10 GLU A 283 ? ? 37.98 87.21 117 10 TYR A 308 ? ? -172.16 47.92 118 10 THR A 309 ? ? 64.06 -62.13 119 10 ARG A 310 ? ? 68.77 -69.17 120 10 PHE A 312 ? ? -111.71 -80.16 # _pdbx_nmr_ensemble.entry_id 8FKM _pdbx_nmr_ensemble.conformers_calculated_total_number 50 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 8FKM _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria medoid # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system _pdbx_nmr_sample_details.label _pdbx_nmr_sample_details.type _pdbx_nmr_sample_details.details 1 '150 mM NaCl, 50 mM HEPES, 2 mM TCEP, 0.5 mM [U-13C; U-15N] human Atg3, 96% H2O/4% D2O' '96% H2O/4% D2O' '13C, 15N' solution ? 2 '150 mM NaCl, 50 mM HEPES, 2 mM TCEP, 0.5 mM [U-13C; U-15N] human Atg3, 6.5 mg/mL Pf1 phage, 96% H2O/4% D2O' '96% H2O/4% D2O' '15N, 2H' solution '6.5 mg/mL phage' 3 '150 mM NaCl, 50 mM HEPES, 2 mM TCEP, 0.5 mM [U-13C; U-15N] human Atg3, 7 % positive gel, 96% H2O/4% D2O' '96% H2O/4% D2O' '15N, 2H' solution '7% positive gel' 4 '150 mM NaCl, 50 mM HEPES, 2 mM TCEP, 0.5 mM [U-13C; U-15N] human Atg3, 5 % negative gel, 96% H2O/4% D2O' '96% H2O/4% D2O' '15N, 2H' solution '5% negative gel' 5 '150 mM NaCl, 50 mM HEPES, 2 mM TCEP, 0.5 mM [U-13C; U-15N] human Atg3, 5 % neutral gel, 96% H2O/4% D2O' '96% H2O/4% D2O' '15N, 2H' solution '5% neutral gel' 6 '150 mM NaCl, 50 mM HEPES, 2 mM TCEP, 0.5 mM [U-13C; U-15N] human Atg3, 100% D2O' '100% D2O' '13C, 15N' solution ? 7 '150 mM NaCl, 50 mM HEPES, 2 mM TCEP, 0.5 mM [U-13C; U-15N] human Atg3, 92% H2O/8% D2O' '92% H2O/8% D2O' '15N, 2H' solution ? # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 NaCl 150 ? mM 'natural abundance' 1 HEPES 50 ? mM 'natural abundance' 1 TCEP 2 ? mM 'natural abundance' 1 'human Atg3' 0.5 ? mM '[U-13C; U-15N]' 2 NaCl 150 ? mM 'natural abundance' 2 HEPES 50 ? mM 'natural abundance' 2 TCEP 2 ? mM 'natural abundance' 2 'human Atg3' 0.5 ? mM '[U-13C; U-15N]' 2 'Pf1 phage' 6.5 ? mg/mL 'natural abundance' 3 NaCl 150 ? mM 'natural abundance' 3 HEPES 50 ? mM 'natural abundance' 3 TCEP 2 ? mM 'natural abundance' 3 'human Atg3' 0.5 ? mM '[U-13C; U-15N]' 3 'positive gel' 7 ? % 'natural abundance' 4 NaCl 150 ? mM 'natural abundance' 4 HEPES 50 ? mM 'natural abundance' 4 TCEP 2 ? mM 'natural abundance' 4 'human Atg3' 0.5 ? mM '[U-13C; U-15N]' 4 'negative gel' 5 ? % 'natural abundance' 5 NaCl 150 ? mM 'natural abundance' 5 HEPES 50 ? mM 'natural abundance' 5 TCEP 2 ? mM 'natural abundance' 5 'human Atg3' 0.5 ? mM '[U-13C; U-15N]' 5 'neutral gel' 5 ? % 'natural abundance' 6 NaCl 150 ? mM 'natural abundance' 6 HEPES 50 ? mM 'natural abundance' 6 TCEP 2 ? mM 'natural abundance' 6 'human Atg3' 0.5 ? mM '[U-13C; U-15N]' 7 NaCl 150 ? mM 'natural abundance' 7 HEPES 50 ? mM 'natural abundance' 7 TCEP 2 ? mM 'natural abundance' 7 'human Atg3' 0.5 ? mM '[U-13C; U-15N]' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure_units Pa _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 6.5 _pdbx_nmr_exptl_sample_conditions.ionic_strength 'NaCl 150' _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units mM _pdbx_nmr_exptl_sample_conditions.label condition_1 _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D 1H-15N HSQC' 1 isotropic 2 1 1 '2D 1H-13C HSQC' 1 isotropic 3 1 1 '3D HNCO' 1 isotropic 4 1 1 '3D HNCA' 1 isotropic 5 1 1 '3D HN(CA)CO' 1 isotropic 9 1 1 '3D HNCACB' 1 isotropic 8 1 1 '3D HN(COCA)CB' 1 isotropic 7 1 6 '3D 1H-13C NOESY' 2 isotropic 6 1 1 '3D 1H-15N NOESY' 2 isotropic 10 1 6 '3D HCCH-TOCSY' 1 isotropic 11 1 7 '2D ARTSY' 1 anisotropic 15 1 2 '2D ARTSY' 1 anisotropic 14 1 3 '2D ARTSY' 1 anisotropic 13 1 4 '2D ARTSY' 1 anisotropic 12 1 5 '2D ARTSY' 1 anisotropic 16 1 1 'HBHA(CO)NH' 1 isotropic 17 1 6 '2D Hb(CbCgCd)Hd' 1 isotropic 18 1 6 '2D Hb(CbCgCdCe)He' 1 isotropic 19 1 6 '3D 1H-13C NOESY aromatic' 1 isotropic 20 1 6 '2D 1H-13C HSQC aromatic' 1 isotropic # _pdbx_nmr_refine.entry_id 8FKM _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 3 # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 'chemical shift assignment' CYANA ? 'Guntert, Mumenthaler and Wuthrich' 2 'structure calculation' 'X-PLOR NIH' ? 'Schwieters, Kuszewski, Tjandra and Clore' 3 refinement 'X-PLOR NIH' ? 'Schwieters, Kuszewski, Tjandra and Clore' 4 'peak picking' NMRView ? 'Johnson, One Moon Scientific' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 PHE N N N N 247 PHE CA C N S 248 PHE C C N N 249 PHE O O N N 250 PHE CB C N N 251 PHE CG C Y N 252 PHE CD1 C Y N 253 PHE CD2 C Y N 254 PHE CE1 C Y N 255 PHE CE2 C Y N 256 PHE CZ C Y N 257 PHE OXT O N N 258 PHE H H N N 259 PHE H2 H N N 260 PHE HA H N N 261 PHE HB2 H N N 262 PHE HB3 H N N 263 PHE HD1 H N N 264 PHE HD2 H N N 265 PHE HE1 H N N 266 PHE HE2 H N N 267 PHE HZ H N N 268 PHE HXT H N N 269 PRO N N N N 270 PRO CA C N S 271 PRO C C N N 272 PRO O O N N 273 PRO CB C N N 274 PRO CG C N N 275 PRO CD C N N 276 PRO OXT O N N 277 PRO H H N N 278 PRO HA H N N 279 PRO HB2 H N N 280 PRO HB3 H N N 281 PRO HG2 H N N 282 PRO HG3 H N N 283 PRO HD2 H N N 284 PRO HD3 H N N 285 PRO HXT H N N 286 SER N N N N 287 SER CA C N S 288 SER C C N N 289 SER O O N N 290 SER CB C N N 291 SER OG O N N 292 SER OXT O N N 293 SER H H N N 294 SER H2 H N N 295 SER HA H N N 296 SER HB2 H N N 297 SER HB3 H N N 298 SER HG H N N 299 SER HXT H N N 300 THR N N N N 301 THR CA C N S 302 THR C C N N 303 THR O O N N 304 THR CB C N R 305 THR OG1 O N N 306 THR CG2 C N N 307 THR OXT O N N 308 THR H H N N 309 THR H2 H N N 310 THR HA H N N 311 THR HB H N N 312 THR HG1 H N N 313 THR HG21 H N N 314 THR HG22 H N N 315 THR HG23 H N N 316 THR HXT H N N 317 TRP N N N N 318 TRP CA C N S 319 TRP C C N N 320 TRP O O N N 321 TRP CB C N N 322 TRP CG C Y N 323 TRP CD1 C Y N 324 TRP CD2 C Y N 325 TRP NE1 N Y N 326 TRP CE2 C Y N 327 TRP CE3 C Y N 328 TRP CZ2 C Y N 329 TRP CZ3 C Y N 330 TRP CH2 C Y N 331 TRP OXT O N N 332 TRP H H N N 333 TRP H2 H N N 334 TRP HA H N N 335 TRP HB2 H N N 336 TRP HB3 H N N 337 TRP HD1 H N N 338 TRP HE1 H N N 339 TRP HE3 H N N 340 TRP HZ2 H N N 341 TRP HZ3 H N N 342 TRP HH2 H N N 343 TRP HXT H N N 344 TYR N N N N 345 TYR CA C N S 346 TYR C C N N 347 TYR O O N N 348 TYR CB C N N 349 TYR CG C Y N 350 TYR CD1 C Y N 351 TYR CD2 C Y N 352 TYR CE1 C Y N 353 TYR CE2 C Y N 354 TYR CZ C Y N 355 TYR OH O N N 356 TYR OXT O N N 357 TYR H H N N 358 TYR H2 H N N 359 TYR HA H N N 360 TYR HB2 H N N 361 TYR HB3 H N N 362 TYR HD1 H N N 363 TYR HD2 H N N 364 TYR HE1 H N N 365 TYR HE2 H N N 366 TYR HH H N N 367 TYR HXT H N N 368 VAL N N N N 369 VAL CA C N S 370 VAL C C N N 371 VAL O O N N 372 VAL CB C N N 373 VAL CG1 C N N 374 VAL CG2 C N N 375 VAL OXT O N N 376 VAL H H N N 377 VAL H2 H N N 378 VAL HA H N N 379 VAL HB H N N 380 VAL HG11 H N N 381 VAL HG12 H N N 382 VAL HG13 H N N 383 VAL HG21 H N N 384 VAL HG22 H N N 385 VAL HG23 H N N 386 VAL HXT H N N 387 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 PHE N CA sing N N 235 PHE N H sing N N 236 PHE N H2 sing N N 237 PHE CA C sing N N 238 PHE CA CB sing N N 239 PHE CA HA sing N N 240 PHE C O doub N N 241 PHE C OXT sing N N 242 PHE CB CG sing N N 243 PHE CB HB2 sing N N 244 PHE CB HB3 sing N N 245 PHE CG CD1 doub Y N 246 PHE CG CD2 sing Y N 247 PHE CD1 CE1 sing Y N 248 PHE CD1 HD1 sing N N 249 PHE CD2 CE2 doub Y N 250 PHE CD2 HD2 sing N N 251 PHE CE1 CZ doub Y N 252 PHE CE1 HE1 sing N N 253 PHE CE2 CZ sing Y N 254 PHE CE2 HE2 sing N N 255 PHE CZ HZ sing N N 256 PHE OXT HXT sing N N 257 PRO N CA sing N N 258 PRO N CD sing N N 259 PRO N H sing N N 260 PRO CA C sing N N 261 PRO CA CB sing N N 262 PRO CA HA sing N N 263 PRO C O doub N N 264 PRO C OXT sing N N 265 PRO CB CG sing N N 266 PRO CB HB2 sing N N 267 PRO CB HB3 sing N N 268 PRO CG CD sing N N 269 PRO CG HG2 sing N N 270 PRO CG HG3 sing N N 271 PRO CD HD2 sing N N 272 PRO CD HD3 sing N N 273 PRO OXT HXT sing N N 274 SER N CA sing N N 275 SER N H sing N N 276 SER N H2 sing N N 277 SER CA C sing N N 278 SER CA CB sing N N 279 SER CA HA sing N N 280 SER C O doub N N 281 SER C OXT sing N N 282 SER CB OG sing N N 283 SER CB HB2 sing N N 284 SER CB HB3 sing N N 285 SER OG HG sing N N 286 SER OXT HXT sing N N 287 THR N CA sing N N 288 THR N H sing N N 289 THR N H2 sing N N 290 THR CA C sing N N 291 THR CA CB sing N N 292 THR CA HA sing N N 293 THR C O doub N N 294 THR C OXT sing N N 295 THR CB OG1 sing N N 296 THR CB CG2 sing N N 297 THR CB HB sing N N 298 THR OG1 HG1 sing N N 299 THR CG2 HG21 sing N N 300 THR CG2 HG22 sing N N 301 THR CG2 HG23 sing N N 302 THR OXT HXT sing N N 303 TRP N CA sing N N 304 TRP N H sing N N 305 TRP N H2 sing N N 306 TRP CA C sing N N 307 TRP CA CB sing N N 308 TRP CA HA sing N N 309 TRP C O doub N N 310 TRP C OXT sing N N 311 TRP CB CG sing N N 312 TRP CB HB2 sing N N 313 TRP CB HB3 sing N N 314 TRP CG CD1 doub Y N 315 TRP CG CD2 sing Y N 316 TRP CD1 NE1 sing Y N 317 TRP CD1 HD1 sing N N 318 TRP CD2 CE2 doub Y N 319 TRP CD2 CE3 sing Y N 320 TRP NE1 CE2 sing Y N 321 TRP NE1 HE1 sing N N 322 TRP CE2 CZ2 sing Y N 323 TRP CE3 CZ3 doub Y N 324 TRP CE3 HE3 sing N N 325 TRP CZ2 CH2 doub Y N 326 TRP CZ2 HZ2 sing N N 327 TRP CZ3 CH2 sing Y N 328 TRP CZ3 HZ3 sing N N 329 TRP CH2 HH2 sing N N 330 TRP OXT HXT sing N N 331 TYR N CA sing N N 332 TYR N H sing N N 333 TYR N H2 sing N N 334 TYR CA C sing N N 335 TYR CA CB sing N N 336 TYR CA HA sing N N 337 TYR C O doub N N 338 TYR C OXT sing N N 339 TYR CB CG sing N N 340 TYR CB HB2 sing N N 341 TYR CB HB3 sing N N 342 TYR CG CD1 doub Y N 343 TYR CG CD2 sing Y N 344 TYR CD1 CE1 sing Y N 345 TYR CD1 HD1 sing N N 346 TYR CD2 CE2 doub Y N 347 TYR CD2 HD2 sing N N 348 TYR CE1 CZ doub Y N 349 TYR CE1 HE1 sing N N 350 TYR CE2 CZ sing Y N 351 TYR CE2 HE2 sing N N 352 TYR CZ OH sing N N 353 TYR OH HH sing N N 354 TYR OXT HXT sing N N 355 VAL N CA sing N N 356 VAL N H sing N N 357 VAL N H2 sing N N 358 VAL CA C sing N N 359 VAL CA CB sing N N 360 VAL CA HA sing N N 361 VAL C O doub N N 362 VAL C OXT sing N N 363 VAL CB CG1 sing N N 364 VAL CB CG2 sing N N 365 VAL CB HB sing N N 366 VAL CG1 HG11 sing N N 367 VAL CG1 HG12 sing N N 368 VAL CG1 HG13 sing N N 369 VAL CG2 HG21 sing N N 370 VAL CG2 HG22 sing N N 371 VAL CG2 HG23 sing N N 372 VAL OXT HXT sing N N 373 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' GM127730 1 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' GM127954 2 'National Institutes of Health/National Cancer Institute (NIH/NCI)' 'United States' CA222349 3 # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.details 1 'AVANCE II' ? Bruker 600 ? 2 'AVANCE III' ? Bruker 850 ? # _atom_sites.entry_id 8FKM _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O S # loop_