data_8FOY # _entry.id 8FOY # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.385 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8FOY pdb_00008foy 10.2210/pdb8foy/pdb WWPDB D_1000271133 ? ? EMDB EMD-29355 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2024-01-17 2 'Structure model' 1 1 2024-02-07 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 2 'Structure model' '_citation.pdbx_database_id_DOI' 9 2 'Structure model' '_citation.pdbx_database_id_PubMed' 10 2 'Structure model' '_citation.title' 11 2 'Structure model' '_citation.year' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8FOY _pdbx_database_status.recvd_initial_deposition_date 2023-01-03 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB . 8FOP unspecified PDB . 8FOU unspecified EMDB 'Structure of Agrobacterium tumefaciens bacteriophage Milano contracted tail-sheath' EMD-29355 'associated EM volume' # _pdbx_contact_author.id 3 _pdbx_contact_author.email ehe2n@virginia.edu _pdbx_contact_author.name_first Edward _pdbx_contact_author.name_last Egelman _pdbx_contact_author.name_mi H _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-4844-5212 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Sonani, R.R.' 1 0000-0002-6212-2869 'Leiman, P.G.' 2 ? 'Wang, F.' 3 ? 'Kreutzberger, M.A.B.' 4 ? 'Sebastian, A.' 5 ? 'Esteves, N.C.' 6 ? 'Kelly, R.J.' 7 ? 'Scharf, B.' 8 ? 'Egelman, E.H.' 9 0000-0003-4844-5212 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 15 _citation.language ? _citation.page_first 756 _citation.page_last 756 _citation.title 'An extensive disulfide bond network prevents tail contraction in Agrobacterium tumefaciens phage Milano.' _citation.year 2024 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-024-44959-z _citation.pdbx_database_id_PubMed 38272938 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Sonani, R.R.' 1 0000-0002-6212-2869 primary 'Palmer, L.K.' 2 ? primary 'Esteves, N.C.' 3 ? primary 'Horton, A.A.' 4 ? primary 'Sebastian, A.L.' 5 ? primary 'Kelly, R.J.' 6 ? primary 'Wang, F.' 7 0000-0003-1008-663X primary 'Kreutzberger, M.A.B.' 8 ? primary 'Russell, W.K.' 9 0000-0003-1931-4555 primary 'Leiman, P.G.' 10 0000-0002-9091-0918 primary 'Scharf, B.E.' 11 0000-0001-6271-8972 primary 'Egelman, E.H.' 12 0000-0003-4844-5212 # _entity.id 1 _entity.type polymer _entity.src_method nat _entity.pdbx_description 'Tail sheath protein' _entity.formula_weight 53896.094 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MAQDALSDGFVRLCIDPSLNFFGEGCKILVEGQMTDDGSATPDAVTCVTSELDIIERFGQGSVLTESLRKVFCTCKSGVS VYALPREDAAAGVKAVYTLTIAGPATTDGRVQLYMGEAEYAVDIGVDAGDTATDIAAAIVAAISPDFPYAATAAAGVITL TARNAGTIGNHLSVIYTNLGSCTSVTPEGVTVTFAQTTAGSVNPTPNDYATVVNECCFAVYVLSSDDTDWQENLRDWIRS AWDCSKPQCFGHGYVFNKGTLGQVLADGDNSAELSRLALPTTYPVLPYLTNAAYGALSACSTCNNPELNIQGQTFGLLSC INMPESCTPGWTFGEVTQLQANGFVVSGPSTTSGQGNYTSPYIYNDVTNYLRDEKNRPNATFRDASSRRLAAATGVALAE FLQQFNGLAVFTKNTNIRTGIIGTNPRLMLGKIRKWAQDNVGTLFSEFDNINEDIQLLTDFEVQPKCVGQPGIFHLNMRY RPPVRGARINVNMAPALFDNCDR ; _entity_poly.pdbx_seq_one_letter_code_can ;MAQDALSDGFVRLCIDPSLNFFGEGCKILVEGQMTDDGSATPDAVTCVTSELDIIERFGQGSVLTESLRKVFCTCKSGVS VYALPREDAAAGVKAVYTLTIAGPATTDGRVQLYMGEAEYAVDIGVDAGDTATDIAAAIVAAISPDFPYAATAAAGVITL TARNAGTIGNHLSVIYTNLGSCTSVTPEGVTVTFAQTTAGSVNPTPNDYATVVNECCFAVYVLSSDDTDWQENLRDWIRS AWDCSKPQCFGHGYVFNKGTLGQVLADGDNSAELSRLALPTTYPVLPYLTNAAYGALSACSTCNNPELNIQGQTFGLLSC INMPESCTPGWTFGEVTQLQANGFVVSGPSTTSGQGNYTSPYIYNDVTNYLRDEKNRPNATFRDASSRRLAAATGVALAE FLQQFNGLAVFTKNTNIRTGIIGTNPRLMLGKIRKWAQDNVGTLFSEFDNINEDIQLLTDFEVQPKCVGQPGIFHLNMRY RPPVRGARINVNMAPALFDNCDR ; _entity_poly.pdbx_strand_id D _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 GLN n 1 4 ASP n 1 5 ALA n 1 6 LEU n 1 7 SER n 1 8 ASP n 1 9 GLY n 1 10 PHE n 1 11 VAL n 1 12 ARG n 1 13 LEU n 1 14 CYS n 1 15 ILE n 1 16 ASP n 1 17 PRO n 1 18 SER n 1 19 LEU n 1 20 ASN n 1 21 PHE n 1 22 PHE n 1 23 GLY n 1 24 GLU n 1 25 GLY n 1 26 CYS n 1 27 LYS n 1 28 ILE n 1 29 LEU n 1 30 VAL n 1 31 GLU n 1 32 GLY n 1 33 GLN n 1 34 MET n 1 35 THR n 1 36 ASP n 1 37 ASP n 1 38 GLY n 1 39 SER n 1 40 ALA n 1 41 THR n 1 42 PRO n 1 43 ASP n 1 44 ALA n 1 45 VAL n 1 46 THR n 1 47 CYS n 1 48 VAL n 1 49 THR n 1 50 SER n 1 51 GLU n 1 52 LEU n 1 53 ASP n 1 54 ILE n 1 55 ILE n 1 56 GLU n 1 57 ARG n 1 58 PHE n 1 59 GLY n 1 60 GLN n 1 61 GLY n 1 62 SER n 1 63 VAL n 1 64 LEU n 1 65 THR n 1 66 GLU n 1 67 SER n 1 68 LEU n 1 69 ARG n 1 70 LYS n 1 71 VAL n 1 72 PHE n 1 73 CYS n 1 74 THR n 1 75 CYS n 1 76 LYS n 1 77 SER n 1 78 GLY n 1 79 VAL n 1 80 SER n 1 81 VAL n 1 82 TYR n 1 83 ALA n 1 84 LEU n 1 85 PRO n 1 86 ARG n 1 87 GLU n 1 88 ASP n 1 89 ALA n 1 90 ALA n 1 91 ALA n 1 92 GLY n 1 93 VAL n 1 94 LYS n 1 95 ALA n 1 96 VAL n 1 97 TYR n 1 98 THR n 1 99 LEU n 1 100 THR n 1 101 ILE n 1 102 ALA n 1 103 GLY n 1 104 PRO n 1 105 ALA n 1 106 THR n 1 107 THR n 1 108 ASP n 1 109 GLY n 1 110 ARG n 1 111 VAL n 1 112 GLN n 1 113 LEU n 1 114 TYR n 1 115 MET n 1 116 GLY n 1 117 GLU n 1 118 ALA n 1 119 GLU n 1 120 TYR n 1 121 ALA n 1 122 VAL n 1 123 ASP n 1 124 ILE n 1 125 GLY n 1 126 VAL n 1 127 ASP n 1 128 ALA n 1 129 GLY n 1 130 ASP n 1 131 THR n 1 132 ALA n 1 133 THR n 1 134 ASP n 1 135 ILE n 1 136 ALA n 1 137 ALA n 1 138 ALA n 1 139 ILE n 1 140 VAL n 1 141 ALA n 1 142 ALA n 1 143 ILE n 1 144 SER n 1 145 PRO n 1 146 ASP n 1 147 PHE n 1 148 PRO n 1 149 TYR n 1 150 ALA n 1 151 ALA n 1 152 THR n 1 153 ALA n 1 154 ALA n 1 155 ALA n 1 156 GLY n 1 157 VAL n 1 158 ILE n 1 159 THR n 1 160 LEU n 1 161 THR n 1 162 ALA n 1 163 ARG n 1 164 ASN n 1 165 ALA n 1 166 GLY n 1 167 THR n 1 168 ILE n 1 169 GLY n 1 170 ASN n 1 171 HIS n 1 172 LEU n 1 173 SER n 1 174 VAL n 1 175 ILE n 1 176 TYR n 1 177 THR n 1 178 ASN n 1 179 LEU n 1 180 GLY n 1 181 SER n 1 182 CYS n 1 183 THR n 1 184 SER n 1 185 VAL n 1 186 THR n 1 187 PRO n 1 188 GLU n 1 189 GLY n 1 190 VAL n 1 191 THR n 1 192 VAL n 1 193 THR n 1 194 PHE n 1 195 ALA n 1 196 GLN n 1 197 THR n 1 198 THR n 1 199 ALA n 1 200 GLY n 1 201 SER n 1 202 VAL n 1 203 ASN n 1 204 PRO n 1 205 THR n 1 206 PRO n 1 207 ASN n 1 208 ASP n 1 209 TYR n 1 210 ALA n 1 211 THR n 1 212 VAL n 1 213 VAL n 1 214 ASN n 1 215 GLU n 1 216 CYS n 1 217 CYS n 1 218 PHE n 1 219 ALA n 1 220 VAL n 1 221 TYR n 1 222 VAL n 1 223 LEU n 1 224 SER n 1 225 SER n 1 226 ASP n 1 227 ASP n 1 228 THR n 1 229 ASP n 1 230 TRP n 1 231 GLN n 1 232 GLU n 1 233 ASN n 1 234 LEU n 1 235 ARG n 1 236 ASP n 1 237 TRP n 1 238 ILE n 1 239 ARG n 1 240 SER n 1 241 ALA n 1 242 TRP n 1 243 ASP n 1 244 CYS n 1 245 SER n 1 246 LYS n 1 247 PRO n 1 248 GLN n 1 249 CYS n 1 250 PHE n 1 251 GLY n 1 252 HIS n 1 253 GLY n 1 254 TYR n 1 255 VAL n 1 256 PHE n 1 257 ASN n 1 258 LYS n 1 259 GLY n 1 260 THR n 1 261 LEU n 1 262 GLY n 1 263 GLN n 1 264 VAL n 1 265 LEU n 1 266 ALA n 1 267 ASP n 1 268 GLY n 1 269 ASP n 1 270 ASN n 1 271 SER n 1 272 ALA n 1 273 GLU n 1 274 LEU n 1 275 SER n 1 276 ARG n 1 277 LEU n 1 278 ALA n 1 279 LEU n 1 280 PRO n 1 281 THR n 1 282 THR n 1 283 TYR n 1 284 PRO n 1 285 VAL n 1 286 LEU n 1 287 PRO n 1 288 TYR n 1 289 LEU n 1 290 THR n 1 291 ASN n 1 292 ALA n 1 293 ALA n 1 294 TYR n 1 295 GLY n 1 296 ALA n 1 297 LEU n 1 298 SER n 1 299 ALA n 1 300 CYS n 1 301 SER n 1 302 THR n 1 303 CYS n 1 304 ASN n 1 305 ASN n 1 306 PRO n 1 307 GLU n 1 308 LEU n 1 309 ASN n 1 310 ILE n 1 311 GLN n 1 312 GLY n 1 313 GLN n 1 314 THR n 1 315 PHE n 1 316 GLY n 1 317 LEU n 1 318 LEU n 1 319 SER n 1 320 CYS n 1 321 ILE n 1 322 ASN n 1 323 MET n 1 324 PRO n 1 325 GLU n 1 326 SER n 1 327 CYS n 1 328 THR n 1 329 PRO n 1 330 GLY n 1 331 TRP n 1 332 THR n 1 333 PHE n 1 334 GLY n 1 335 GLU n 1 336 VAL n 1 337 THR n 1 338 GLN n 1 339 LEU n 1 340 GLN n 1 341 ALA n 1 342 ASN n 1 343 GLY n 1 344 PHE n 1 345 VAL n 1 346 VAL n 1 347 SER n 1 348 GLY n 1 349 PRO n 1 350 SER n 1 351 THR n 1 352 THR n 1 353 SER n 1 354 GLY n 1 355 GLN n 1 356 GLY n 1 357 ASN n 1 358 TYR n 1 359 THR n 1 360 SER n 1 361 PRO n 1 362 TYR n 1 363 ILE n 1 364 TYR n 1 365 ASN n 1 366 ASP n 1 367 VAL n 1 368 THR n 1 369 ASN n 1 370 TYR n 1 371 LEU n 1 372 ARG n 1 373 ASP n 1 374 GLU n 1 375 LYS n 1 376 ASN n 1 377 ARG n 1 378 PRO n 1 379 ASN n 1 380 ALA n 1 381 THR n 1 382 PHE n 1 383 ARG n 1 384 ASP n 1 385 ALA n 1 386 SER n 1 387 SER n 1 388 ARG n 1 389 ARG n 1 390 LEU n 1 391 ALA n 1 392 ALA n 1 393 ALA n 1 394 THR n 1 395 GLY n 1 396 VAL n 1 397 ALA n 1 398 LEU n 1 399 ALA n 1 400 GLU n 1 401 PHE n 1 402 LEU n 1 403 GLN n 1 404 GLN n 1 405 PHE n 1 406 ASN n 1 407 GLY n 1 408 LEU n 1 409 ALA n 1 410 VAL n 1 411 PHE n 1 412 THR n 1 413 LYS n 1 414 ASN n 1 415 THR n 1 416 ASN n 1 417 ILE n 1 418 ARG n 1 419 THR n 1 420 GLY n 1 421 ILE n 1 422 ILE n 1 423 GLY n 1 424 THR n 1 425 ASN n 1 426 PRO n 1 427 ARG n 1 428 LEU n 1 429 MET n 1 430 LEU n 1 431 GLY n 1 432 LYS n 1 433 ILE n 1 434 ARG n 1 435 LYS n 1 436 TRP n 1 437 ALA n 1 438 GLN n 1 439 ASP n 1 440 ASN n 1 441 VAL n 1 442 GLY n 1 443 THR n 1 444 LEU n 1 445 PHE n 1 446 SER n 1 447 GLU n 1 448 PHE n 1 449 ASP n 1 450 ASN n 1 451 ILE n 1 452 ASN n 1 453 GLU n 1 454 ASP n 1 455 ILE n 1 456 GLN n 1 457 LEU n 1 458 LEU n 1 459 THR n 1 460 ASP n 1 461 PHE n 1 462 GLU n 1 463 VAL n 1 464 GLN n 1 465 PRO n 1 466 LYS n 1 467 CYS n 1 468 VAL n 1 469 GLY n 1 470 GLN n 1 471 PRO n 1 472 GLY n 1 473 ILE n 1 474 PHE n 1 475 HIS n 1 476 LEU n 1 477 ASN n 1 478 MET n 1 479 ARG n 1 480 TYR n 1 481 ARG n 1 482 PRO n 1 483 PRO n 1 484 VAL n 1 485 ARG n 1 486 GLY n 1 487 ALA n 1 488 ARG n 1 489 ILE n 1 490 ASN n 1 491 VAL n 1 492 ASN n 1 493 MET n 1 494 ALA n 1 495 PRO n 1 496 ALA n 1 497 LEU n 1 498 PHE n 1 499 ASP n 1 500 ASN n 1 501 CYS n 1 502 ASP n 1 503 ARG n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num 1 _entity_src_nat.pdbx_end_seq_num 503 _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'Agrobacterium phage Milano' _entity_src_nat.pdbx_ncbi_taxonomy_id 2557550 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? D . n A 1 2 ALA 2 2 2 ALA ALA D . n A 1 3 GLN 3 3 3 GLN GLN D . n A 1 4 ASP 4 4 4 ASP ASP D . n A 1 5 ALA 5 5 5 ALA ALA D . n A 1 6 LEU 6 6 6 LEU LEU D . n A 1 7 SER 7 7 7 SER SER D . n A 1 8 ASP 8 8 8 ASP ASP D . n A 1 9 GLY 9 9 9 GLY GLY D . n A 1 10 PHE 10 10 10 PHE PHE D . n A 1 11 VAL 11 11 11 VAL VAL D . n A 1 12 ARG 12 12 12 ARG ARG D . n A 1 13 LEU 13 13 13 LEU LEU D . n A 1 14 CYS 14 14 14 CYS CYS D . n A 1 15 ILE 15 15 15 ILE ILE D . n A 1 16 ASP 16 16 16 ASP ASP D . n A 1 17 PRO 17 17 17 PRO PRO D . n A 1 18 SER 18 18 18 SER SER D . n A 1 19 LEU 19 19 19 LEU LEU D . n A 1 20 ASN 20 20 20 ASN ASN D . n A 1 21 PHE 21 21 21 PHE PHE D . n A 1 22 PHE 22 22 22 PHE PHE D . n A 1 23 GLY 23 23 23 GLY GLY D . n A 1 24 GLU 24 24 24 GLU GLU D . n A 1 25 GLY 25 25 25 GLY GLY D . n A 1 26 CYS 26 26 26 CYS CYS D . n A 1 27 LYS 27 27 27 LYS LYS D . n A 1 28 ILE 28 28 28 ILE ILE D . n A 1 29 LEU 29 29 29 LEU LEU D . n A 1 30 VAL 30 30 30 VAL VAL D . n A 1 31 GLU 31 31 31 GLU GLU D . n A 1 32 GLY 32 32 32 GLY GLY D . n A 1 33 GLN 33 33 33 GLN GLN D . n A 1 34 MET 34 34 34 MET MET D . n A 1 35 THR 35 35 35 THR THR D . n A 1 36 ASP 36 36 36 ASP ASP D . n A 1 37 ASP 37 37 37 ASP ASP D . n A 1 38 GLY 38 38 38 GLY GLY D . n A 1 39 SER 39 39 39 SER SER D . n A 1 40 ALA 40 40 40 ALA ALA D . n A 1 41 THR 41 41 41 THR THR D . n A 1 42 PRO 42 42 42 PRO PRO D . n A 1 43 ASP 43 43 43 ASP ASP D . n A 1 44 ALA 44 44 44 ALA ALA D . n A 1 45 VAL 45 45 45 VAL VAL D . n A 1 46 THR 46 46 46 THR THR D . n A 1 47 CYS 47 47 47 CYS CYS D . n A 1 48 VAL 48 48 48 VAL VAL D . n A 1 49 THR 49 49 49 THR THR D . n A 1 50 SER 50 50 50 SER SER D . n A 1 51 GLU 51 51 51 GLU GLU D . n A 1 52 LEU 52 52 52 LEU LEU D . n A 1 53 ASP 53 53 53 ASP ASP D . n A 1 54 ILE 54 54 54 ILE ILE D . n A 1 55 ILE 55 55 55 ILE ILE D . n A 1 56 GLU 56 56 56 GLU GLU D . n A 1 57 ARG 57 57 57 ARG ARG D . n A 1 58 PHE 58 58 58 PHE PHE D . n A 1 59 GLY 59 59 59 GLY GLY D . n A 1 60 GLN 60 60 60 GLN GLN D . n A 1 61 GLY 61 61 61 GLY GLY D . n A 1 62 SER 62 62 62 SER SER D . n A 1 63 VAL 63 63 63 VAL VAL D . n A 1 64 LEU 64 64 64 LEU LEU D . n A 1 65 THR 65 65 65 THR THR D . n A 1 66 GLU 66 66 66 GLU GLU D . n A 1 67 SER 67 67 67 SER SER D . n A 1 68 LEU 68 68 68 LEU LEU D . n A 1 69 ARG 69 69 69 ARG ARG D . n A 1 70 LYS 70 70 70 LYS LYS D . n A 1 71 VAL 71 71 71 VAL VAL D . n A 1 72 PHE 72 72 72 PHE PHE D . n A 1 73 CYS 73 73 73 CYS CYS D . n A 1 74 THR 74 74 74 THR THR D . n A 1 75 CYS 75 75 75 CYS CYS D . n A 1 76 LYS 76 76 76 LYS LYS D . n A 1 77 SER 77 77 77 SER SER D . n A 1 78 GLY 78 78 78 GLY GLY D . n A 1 79 VAL 79 79 79 VAL VAL D . n A 1 80 SER 80 80 80 SER SER D . n A 1 81 VAL 81 81 81 VAL VAL D . n A 1 82 TYR 82 82 82 TYR TYR D . n A 1 83 ALA 83 83 83 ALA ALA D . n A 1 84 LEU 84 84 84 LEU LEU D . n A 1 85 PRO 85 85 85 PRO PRO D . n A 1 86 ARG 86 86 86 ARG ARG D . n A 1 87 GLU 87 87 87 GLU GLU D . n A 1 88 ASP 88 88 88 ASP ASP D . n A 1 89 ALA 89 89 89 ALA ALA D . n A 1 90 ALA 90 90 90 ALA ALA D . n A 1 91 ALA 91 91 91 ALA ALA D . n A 1 92 GLY 92 92 92 GLY GLY D . n A 1 93 VAL 93 93 93 VAL VAL D . n A 1 94 LYS 94 94 94 LYS LYS D . n A 1 95 ALA 95 95 95 ALA ALA D . n A 1 96 VAL 96 96 96 VAL VAL D . n A 1 97 TYR 97 97 97 TYR TYR D . n A 1 98 THR 98 98 98 THR THR D . n A 1 99 LEU 99 99 99 LEU LEU D . n A 1 100 THR 100 100 100 THR THR D . n A 1 101 ILE 101 101 101 ILE ILE D . n A 1 102 ALA 102 102 102 ALA ALA D . n A 1 103 GLY 103 103 103 GLY GLY D . n A 1 104 PRO 104 104 104 PRO PRO D . n A 1 105 ALA 105 105 105 ALA ALA D . n A 1 106 THR 106 106 106 THR THR D . n A 1 107 THR 107 107 107 THR THR D . n A 1 108 ASP 108 108 108 ASP ASP D . n A 1 109 GLY 109 109 109 GLY GLY D . n A 1 110 ARG 110 110 110 ARG ARG D . n A 1 111 VAL 111 111 111 VAL VAL D . n A 1 112 GLN 112 112 112 GLN GLN D . n A 1 113 LEU 113 113 113 LEU LEU D . n A 1 114 TYR 114 114 114 TYR TYR D . n A 1 115 MET 115 115 115 MET MET D . n A 1 116 GLY 116 116 116 GLY GLY D . n A 1 117 GLU 117 117 117 GLU GLU D . n A 1 118 ALA 118 118 118 ALA ALA D . n A 1 119 GLU 119 119 119 GLU GLU D . n A 1 120 TYR 120 120 120 TYR TYR D . n A 1 121 ALA 121 121 121 ALA ALA D . n A 1 122 VAL 122 122 122 VAL VAL D . n A 1 123 ASP 123 123 123 ASP ASP D . n A 1 124 ILE 124 124 124 ILE ILE D . n A 1 125 GLY 125 125 125 GLY GLY D . n A 1 126 VAL 126 126 126 VAL VAL D . n A 1 127 ASP 127 127 127 ASP ASP D . n A 1 128 ALA 128 128 128 ALA ALA D . n A 1 129 GLY 129 129 129 GLY GLY D . n A 1 130 ASP 130 130 130 ASP ASP D . n A 1 131 THR 131 131 131 THR THR D . n A 1 132 ALA 132 132 132 ALA ALA D . n A 1 133 THR 133 133 133 THR THR D . n A 1 134 ASP 134 134 134 ASP ASP D . n A 1 135 ILE 135 135 135 ILE ILE D . n A 1 136 ALA 136 136 136 ALA ALA D . n A 1 137 ALA 137 137 137 ALA ALA D . n A 1 138 ALA 138 138 138 ALA ALA D . n A 1 139 ILE 139 139 139 ILE ILE D . n A 1 140 VAL 140 140 140 VAL VAL D . n A 1 141 ALA 141 141 141 ALA ALA D . n A 1 142 ALA 142 142 142 ALA ALA D . n A 1 143 ILE 143 143 143 ILE ILE D . n A 1 144 SER 144 144 144 SER SER D . n A 1 145 PRO 145 145 145 PRO PRO D . n A 1 146 ASP 146 146 146 ASP ASP D . n A 1 147 PHE 147 147 147 PHE PHE D . n A 1 148 PRO 148 148 148 PRO PRO D . n A 1 149 TYR 149 149 149 TYR TYR D . n A 1 150 ALA 150 150 150 ALA ALA D . n A 1 151 ALA 151 151 151 ALA ALA D . n A 1 152 THR 152 152 152 THR THR D . n A 1 153 ALA 153 153 153 ALA ALA D . n A 1 154 ALA 154 154 154 ALA ALA D . n A 1 155 ALA 155 155 155 ALA ALA D . n A 1 156 GLY 156 156 156 GLY GLY D . n A 1 157 VAL 157 157 157 VAL VAL D . n A 1 158 ILE 158 158 158 ILE ILE D . n A 1 159 THR 159 159 159 THR THR D . n A 1 160 LEU 160 160 160 LEU LEU D . n A 1 161 THR 161 161 161 THR THR D . n A 1 162 ALA 162 162 162 ALA ALA D . n A 1 163 ARG 163 163 163 ARG ARG D . n A 1 164 ASN 164 164 164 ASN ASN D . n A 1 165 ALA 165 165 165 ALA ALA D . n A 1 166 GLY 166 166 166 GLY GLY D . n A 1 167 THR 167 167 167 THR THR D . n A 1 168 ILE 168 168 168 ILE ILE D . n A 1 169 GLY 169 169 169 GLY GLY D . n A 1 170 ASN 170 170 170 ASN ASN D . n A 1 171 HIS 171 171 171 HIS HIS D . n A 1 172 LEU 172 172 172 LEU LEU D . n A 1 173 SER 173 173 173 SER SER D . n A 1 174 VAL 174 174 174 VAL VAL D . n A 1 175 ILE 175 175 175 ILE ILE D . n A 1 176 TYR 176 176 176 TYR TYR D . n A 1 177 THR 177 177 177 THR THR D . n A 1 178 ASN 178 178 178 ASN ASN D . n A 1 179 LEU 179 179 179 LEU LEU D . n A 1 180 GLY 180 180 180 GLY GLY D . n A 1 181 SER 181 181 181 SER SER D . n A 1 182 CYS 182 182 182 CYS CYS D . n A 1 183 THR 183 183 183 THR THR D . n A 1 184 SER 184 184 184 SER SER D . n A 1 185 VAL 185 185 185 VAL VAL D . n A 1 186 THR 186 186 186 THR THR D . n A 1 187 PRO 187 187 187 PRO PRO D . n A 1 188 GLU 188 188 188 GLU GLU D . n A 1 189 GLY 189 189 189 GLY GLY D . n A 1 190 VAL 190 190 190 VAL VAL D . n A 1 191 THR 191 191 191 THR THR D . n A 1 192 VAL 192 192 192 VAL VAL D . n A 1 193 THR 193 193 193 THR THR D . n A 1 194 PHE 194 194 194 PHE PHE D . n A 1 195 ALA 195 195 195 ALA ALA D . n A 1 196 GLN 196 196 196 GLN GLN D . n A 1 197 THR 197 197 197 THR THR D . n A 1 198 THR 198 198 198 THR THR D . n A 1 199 ALA 199 199 199 ALA ALA D . n A 1 200 GLY 200 200 200 GLY GLY D . n A 1 201 SER 201 201 201 SER SER D . n A 1 202 VAL 202 202 202 VAL VAL D . n A 1 203 ASN 203 203 203 ASN ASN D . n A 1 204 PRO 204 204 204 PRO PRO D . n A 1 205 THR 205 205 205 THR THR D . n A 1 206 PRO 206 206 206 PRO PRO D . n A 1 207 ASN 207 207 207 ASN ASN D . n A 1 208 ASP 208 208 208 ASP ASP D . n A 1 209 TYR 209 209 209 TYR TYR D . n A 1 210 ALA 210 210 210 ALA ALA D . n A 1 211 THR 211 211 211 THR THR D . n A 1 212 VAL 212 212 212 VAL VAL D . n A 1 213 VAL 213 213 213 VAL VAL D . n A 1 214 ASN 214 214 214 ASN ASN D . n A 1 215 GLU 215 215 215 GLU GLU D . n A 1 216 CYS 216 216 216 CYS CYS D . n A 1 217 CYS 217 217 217 CYS CYS D . n A 1 218 PHE 218 218 218 PHE PHE D . n A 1 219 ALA 219 219 219 ALA ALA D . n A 1 220 VAL 220 220 220 VAL VAL D . n A 1 221 TYR 221 221 221 TYR TYR D . n A 1 222 VAL 222 222 222 VAL VAL D . n A 1 223 LEU 223 223 223 LEU LEU D . n A 1 224 SER 224 224 224 SER SER D . n A 1 225 SER 225 225 225 SER SER D . n A 1 226 ASP 226 226 226 ASP ASP D . n A 1 227 ASP 227 227 227 ASP ASP D . n A 1 228 THR 228 228 228 THR THR D . n A 1 229 ASP 229 229 229 ASP ASP D . n A 1 230 TRP 230 230 230 TRP TRP D . n A 1 231 GLN 231 231 231 GLN GLN D . n A 1 232 GLU 232 232 232 GLU GLU D . n A 1 233 ASN 233 233 233 ASN ASN D . n A 1 234 LEU 234 234 234 LEU LEU D . n A 1 235 ARG 235 235 235 ARG ARG D . n A 1 236 ASP 236 236 236 ASP ASP D . n A 1 237 TRP 237 237 237 TRP TRP D . n A 1 238 ILE 238 238 238 ILE ILE D . n A 1 239 ARG 239 239 239 ARG ARG D . n A 1 240 SER 240 240 240 SER SER D . n A 1 241 ALA 241 241 241 ALA ALA D . n A 1 242 TRP 242 242 242 TRP TRP D . n A 1 243 ASP 243 243 243 ASP ASP D . n A 1 244 CYS 244 244 244 CYS CYS D . n A 1 245 SER 245 245 245 SER SER D . n A 1 246 LYS 246 246 246 LYS LYS D . n A 1 247 PRO 247 247 247 PRO PRO D . n A 1 248 GLN 248 248 248 GLN GLN D . n A 1 249 CYS 249 249 249 CYS CYS D . n A 1 250 PHE 250 250 250 PHE PHE D . n A 1 251 GLY 251 251 251 GLY GLY D . n A 1 252 HIS 252 252 252 HIS HIS D . n A 1 253 GLY 253 253 253 GLY GLY D . n A 1 254 TYR 254 254 254 TYR TYR D . n A 1 255 VAL 255 255 255 VAL VAL D . n A 1 256 PHE 256 256 256 PHE PHE D . n A 1 257 ASN 257 257 257 ASN ASN D . n A 1 258 LYS 258 258 258 LYS LYS D . n A 1 259 GLY 259 259 259 GLY GLY D . n A 1 260 THR 260 260 260 THR THR D . n A 1 261 LEU 261 261 261 LEU LEU D . n A 1 262 GLY 262 262 262 GLY GLY D . n A 1 263 GLN 263 263 263 GLN GLN D . n A 1 264 VAL 264 264 264 VAL VAL D . n A 1 265 LEU 265 265 265 LEU LEU D . n A 1 266 ALA 266 266 266 ALA ALA D . n A 1 267 ASP 267 267 267 ASP ASP D . n A 1 268 GLY 268 268 268 GLY GLY D . n A 1 269 ASP 269 269 269 ASP ASP D . n A 1 270 ASN 270 270 270 ASN ASN D . n A 1 271 SER 271 271 271 SER SER D . n A 1 272 ALA 272 272 272 ALA ALA D . n A 1 273 GLU 273 273 273 GLU GLU D . n A 1 274 LEU 274 274 274 LEU LEU D . n A 1 275 SER 275 275 275 SER SER D . n A 1 276 ARG 276 276 276 ARG ARG D . n A 1 277 LEU 277 277 277 LEU LEU D . n A 1 278 ALA 278 278 278 ALA ALA D . n A 1 279 LEU 279 279 279 LEU LEU D . n A 1 280 PRO 280 280 280 PRO PRO D . n A 1 281 THR 281 281 281 THR THR D . n A 1 282 THR 282 282 282 THR THR D . n A 1 283 TYR 283 283 283 TYR TYR D . n A 1 284 PRO 284 284 284 PRO PRO D . n A 1 285 VAL 285 285 285 VAL VAL D . n A 1 286 LEU 286 286 286 LEU LEU D . n A 1 287 PRO 287 287 287 PRO PRO D . n A 1 288 TYR 288 288 288 TYR TYR D . n A 1 289 LEU 289 289 289 LEU LEU D . n A 1 290 THR 290 290 290 THR THR D . n A 1 291 ASN 291 291 291 ASN ASN D . n A 1 292 ALA 292 292 292 ALA ALA D . n A 1 293 ALA 293 293 293 ALA ALA D . n A 1 294 TYR 294 294 294 TYR TYR D . n A 1 295 GLY 295 295 295 GLY GLY D . n A 1 296 ALA 296 296 296 ALA ALA D . n A 1 297 LEU 297 297 297 LEU LEU D . n A 1 298 SER 298 298 298 SER SER D . n A 1 299 ALA 299 299 299 ALA ALA D . n A 1 300 CYS 300 300 300 CYS CYS D . n A 1 301 SER 301 301 301 SER SER D . n A 1 302 THR 302 302 302 THR THR D . n A 1 303 CYS 303 303 303 CYS CYS D . n A 1 304 ASN 304 304 304 ASN ASN D . n A 1 305 ASN 305 305 305 ASN ASN D . n A 1 306 PRO 306 306 306 PRO PRO D . n A 1 307 GLU 307 307 307 GLU GLU D . n A 1 308 LEU 308 308 308 LEU LEU D . n A 1 309 ASN 309 309 309 ASN ASN D . n A 1 310 ILE 310 310 310 ILE ILE D . n A 1 311 GLN 311 311 311 GLN GLN D . n A 1 312 GLY 312 312 312 GLY GLY D . n A 1 313 GLN 313 313 313 GLN GLN D . n A 1 314 THR 314 314 314 THR THR D . n A 1 315 PHE 315 315 315 PHE PHE D . n A 1 316 GLY 316 316 316 GLY GLY D . n A 1 317 LEU 317 317 317 LEU LEU D . n A 1 318 LEU 318 318 318 LEU LEU D . n A 1 319 SER 319 319 319 SER SER D . n A 1 320 CYS 320 320 320 CYS CYS D . n A 1 321 ILE 321 321 321 ILE ILE D . n A 1 322 ASN 322 322 322 ASN ASN D . n A 1 323 MET 323 323 323 MET MET D . n A 1 324 PRO 324 324 324 PRO PRO D . n A 1 325 GLU 325 325 325 GLU GLU D . n A 1 326 SER 326 326 326 SER SER D . n A 1 327 CYS 327 327 327 CYS CYS D . n A 1 328 THR 328 328 328 THR THR D . n A 1 329 PRO 329 329 329 PRO PRO D . n A 1 330 GLY 330 330 330 GLY GLY D . n A 1 331 TRP 331 331 331 TRP TRP D . n A 1 332 THR 332 332 332 THR THR D . n A 1 333 PHE 333 333 333 PHE PHE D . n A 1 334 GLY 334 334 334 GLY GLY D . n A 1 335 GLU 335 335 335 GLU GLU D . n A 1 336 VAL 336 336 336 VAL VAL D . n A 1 337 THR 337 337 337 THR THR D . n A 1 338 GLN 338 338 338 GLN GLN D . n A 1 339 LEU 339 339 339 LEU LEU D . n A 1 340 GLN 340 340 340 GLN GLN D . n A 1 341 ALA 341 341 341 ALA ALA D . n A 1 342 ASN 342 342 342 ASN ASN D . n A 1 343 GLY 343 343 343 GLY GLY D . n A 1 344 PHE 344 344 344 PHE PHE D . n A 1 345 VAL 345 345 345 VAL VAL D . n A 1 346 VAL 346 346 346 VAL VAL D . n A 1 347 SER 347 347 347 SER SER D . n A 1 348 GLY 348 348 348 GLY GLY D . n A 1 349 PRO 349 349 349 PRO PRO D . n A 1 350 SER 350 350 350 SER SER D . n A 1 351 THR 351 351 351 THR THR D . n A 1 352 THR 352 352 352 THR THR D . n A 1 353 SER 353 353 353 SER SER D . n A 1 354 GLY 354 354 354 GLY GLY D . n A 1 355 GLN 355 355 355 GLN GLN D . n A 1 356 GLY 356 356 356 GLY GLY D . n A 1 357 ASN 357 357 357 ASN ASN D . n A 1 358 TYR 358 358 358 TYR TYR D . n A 1 359 THR 359 359 359 THR THR D . n A 1 360 SER 360 360 360 SER SER D . n A 1 361 PRO 361 361 361 PRO PRO D . n A 1 362 TYR 362 362 362 TYR TYR D . n A 1 363 ILE 363 363 363 ILE ILE D . n A 1 364 TYR 364 364 364 TYR TYR D . n A 1 365 ASN 365 365 365 ASN ASN D . n A 1 366 ASP 366 366 366 ASP ASP D . n A 1 367 VAL 367 367 367 VAL VAL D . n A 1 368 THR 368 368 368 THR THR D . n A 1 369 ASN 369 369 369 ASN ASN D . n A 1 370 TYR 370 370 370 TYR TYR D . n A 1 371 LEU 371 371 371 LEU LEU D . n A 1 372 ARG 372 372 372 ARG ARG D . n A 1 373 ASP 373 373 373 ASP ASP D . n A 1 374 GLU 374 374 374 GLU GLU D . n A 1 375 LYS 375 375 375 LYS LYS D . n A 1 376 ASN 376 376 376 ASN ASN D . n A 1 377 ARG 377 377 377 ARG ARG D . n A 1 378 PRO 378 378 378 PRO PRO D . n A 1 379 ASN 379 379 379 ASN ASN D . n A 1 380 ALA 380 380 380 ALA ALA D . n A 1 381 THR 381 381 381 THR THR D . n A 1 382 PHE 382 382 382 PHE PHE D . n A 1 383 ARG 383 383 383 ARG ARG D . n A 1 384 ASP 384 384 384 ASP ASP D . n A 1 385 ALA 385 385 385 ALA ALA D . n A 1 386 SER 386 386 386 SER SER D . n A 1 387 SER 387 387 387 SER SER D . n A 1 388 ARG 388 388 388 ARG ARG D . n A 1 389 ARG 389 389 389 ARG ARG D . n A 1 390 LEU 390 390 390 LEU LEU D . n A 1 391 ALA 391 391 391 ALA ALA D . n A 1 392 ALA 392 392 392 ALA ALA D . n A 1 393 ALA 393 393 393 ALA ALA D . n A 1 394 THR 394 394 394 THR THR D . n A 1 395 GLY 395 395 395 GLY GLY D . n A 1 396 VAL 396 396 396 VAL VAL D . n A 1 397 ALA 397 397 397 ALA ALA D . n A 1 398 LEU 398 398 398 LEU LEU D . n A 1 399 ALA 399 399 399 ALA ALA D . n A 1 400 GLU 400 400 400 GLU GLU D . n A 1 401 PHE 401 401 401 PHE PHE D . n A 1 402 LEU 402 402 402 LEU LEU D . n A 1 403 GLN 403 403 403 GLN GLN D . n A 1 404 GLN 404 404 404 GLN GLN D . n A 1 405 PHE 405 405 405 PHE PHE D . n A 1 406 ASN 406 406 406 ASN ASN D . n A 1 407 GLY 407 407 407 GLY GLY D . n A 1 408 LEU 408 408 408 LEU LEU D . n A 1 409 ALA 409 409 409 ALA ALA D . n A 1 410 VAL 410 410 410 VAL VAL D . n A 1 411 PHE 411 411 411 PHE PHE D . n A 1 412 THR 412 412 412 THR THR D . n A 1 413 LYS 413 413 413 LYS LYS D . n A 1 414 ASN 414 414 414 ASN ASN D . n A 1 415 THR 415 415 415 THR THR D . n A 1 416 ASN 416 416 416 ASN ASN D . n A 1 417 ILE 417 417 417 ILE ILE D . n A 1 418 ARG 418 418 418 ARG ARG D . n A 1 419 THR 419 419 419 THR THR D . n A 1 420 GLY 420 420 420 GLY GLY D . n A 1 421 ILE 421 421 421 ILE ILE D . n A 1 422 ILE 422 422 422 ILE ILE D . n A 1 423 GLY 423 423 423 GLY GLY D . n A 1 424 THR 424 424 424 THR THR D . n A 1 425 ASN 425 425 425 ASN ASN D . n A 1 426 PRO 426 426 426 PRO PRO D . n A 1 427 ARG 427 427 427 ARG ARG D . n A 1 428 LEU 428 428 428 LEU LEU D . n A 1 429 MET 429 429 429 MET MET D . n A 1 430 LEU 430 430 430 LEU LEU D . n A 1 431 GLY 431 431 431 GLY GLY D . n A 1 432 LYS 432 432 432 LYS LYS D . n A 1 433 ILE 433 433 433 ILE ILE D . n A 1 434 ARG 434 434 434 ARG ARG D . n A 1 435 LYS 435 435 435 LYS LYS D . n A 1 436 TRP 436 436 436 TRP TRP D . n A 1 437 ALA 437 437 437 ALA ALA D . n A 1 438 GLN 438 438 438 GLN GLN D . n A 1 439 ASP 439 439 439 ASP ASP D . n A 1 440 ASN 440 440 440 ASN ASN D . n A 1 441 VAL 441 441 441 VAL VAL D . n A 1 442 GLY 442 442 442 GLY GLY D . n A 1 443 THR 443 443 443 THR THR D . n A 1 444 LEU 444 444 444 LEU LEU D . n A 1 445 PHE 445 445 445 PHE PHE D . n A 1 446 SER 446 446 446 SER SER D . n A 1 447 GLU 447 447 447 GLU GLU D . n A 1 448 PHE 448 448 448 PHE PHE D . n A 1 449 ASP 449 449 449 ASP ASP D . n A 1 450 ASN 450 450 450 ASN ASN D . n A 1 451 ILE 451 451 451 ILE ILE D . n A 1 452 ASN 452 452 452 ASN ASN D . n A 1 453 GLU 453 453 453 GLU GLU D . n A 1 454 ASP 454 454 454 ASP ASP D . n A 1 455 ILE 455 455 455 ILE ILE D . n A 1 456 GLN 456 456 456 GLN GLN D . n A 1 457 LEU 457 457 457 LEU LEU D . n A 1 458 LEU 458 458 458 LEU LEU D . n A 1 459 THR 459 459 459 THR THR D . n A 1 460 ASP 460 460 460 ASP ASP D . n A 1 461 PHE 461 461 461 PHE PHE D . n A 1 462 GLU 462 462 462 GLU GLU D . n A 1 463 VAL 463 463 463 VAL VAL D . n A 1 464 GLN 464 464 464 GLN GLN D . n A 1 465 PRO 465 465 465 PRO PRO D . n A 1 466 LYS 466 466 466 LYS LYS D . n A 1 467 CYS 467 467 467 CYS CYS D . n A 1 468 VAL 468 468 468 VAL VAL D . n A 1 469 GLY 469 469 469 GLY GLY D . n A 1 470 GLN 470 470 470 GLN GLN D . n A 1 471 PRO 471 471 471 PRO PRO D . n A 1 472 GLY 472 472 472 GLY GLY D . n A 1 473 ILE 473 473 473 ILE ILE D . n A 1 474 PHE 474 474 474 PHE PHE D . n A 1 475 HIS 475 475 475 HIS HIS D . n A 1 476 LEU 476 476 476 LEU LEU D . n A 1 477 ASN 477 477 477 ASN ASN D . n A 1 478 MET 478 478 478 MET MET D . n A 1 479 ARG 479 479 479 ARG ARG D . n A 1 480 TYR 480 480 480 TYR TYR D . n A 1 481 ARG 481 481 481 ARG ARG D . n A 1 482 PRO 482 482 482 PRO PRO D . n A 1 483 PRO 483 483 483 PRO PRO D . n A 1 484 VAL 484 484 484 VAL VAL D . n A 1 485 ARG 485 485 485 ARG ARG D . n A 1 486 GLY 486 486 486 GLY GLY D . n A 1 487 ALA 487 487 487 ALA ALA D . n A 1 488 ARG 488 488 488 ARG ARG D . n A 1 489 ILE 489 489 489 ILE ILE D . n A 1 490 ASN 490 490 490 ASN ASN D . n A 1 491 VAL 491 491 491 VAL VAL D . n A 1 492 ASN 492 492 492 ASN ASN D . n A 1 493 MET 493 493 493 MET MET D . n A 1 494 ALA 494 494 494 ALA ALA D . n A 1 495 PRO 495 495 495 PRO PRO D . n A 1 496 ALA 496 496 496 ALA ALA D . n A 1 497 LEU 497 497 497 LEU LEU D . n A 1 498 PHE 498 498 498 PHE PHE D . n A 1 499 ASP 499 499 499 ASP ASP D . n A 1 500 ASN 500 500 500 ASN ASN D . n A 1 501 CYS 501 501 501 CYS CYS D . n A 1 502 ASP 502 502 ? ? ? D . n A 1 503 ARG 503 503 ? ? ? D . n # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 8FOY _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8FOY _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8FOY _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.entry_id 8FOY _refine.pdbx_diffrn_id ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high . _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.009 ? 3829 ? f_bond_d ? ? 'ELECTRON MICROSCOPY' ? 0.726 ? 5230 ? f_angle_d ? ? 'ELECTRON MICROSCOPY' ? 6.307 ? 2264 ? f_dihedral_angle_d ? ? 'ELECTRON MICROSCOPY' ? 0.048 ? 605 ? f_chiral_restr ? ? 'ELECTRON MICROSCOPY' ? 0.004 ? 693 ? f_plane_restr ? ? # _struct.entry_id 8FOY _struct.title 'Structure of Agrobacterium tumefaciens bacteriophage Milano contracted tail-sheath' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8FOY _struct_keywords.text 'Myophage, redox trigger, VIRUS' _struct_keywords.pdbx_keywords VIRUS # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A0A482MFS8_9CAUD _struct_ref.pdbx_db_accession A0A482MFS8 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MAQDALSDGFVRLCIDPSLNFFGEGCKILVEGQMTDDGSATPDAVTCVTSELDIIERFGQGSVLTESLRKVFCTCKSGVS VYALPREDAAAGVKAVYTLTIAGPATTDGRVQLYMGEAEYAVDIGVDAGDTATDIAAAIVAAISPDFPYAATAAAGVITL TARNAGTIGNHLSVIYTNLGSCTSVTPEGVTVTFAQTTAGSVNPTPNDYATVVNECCFAVYVLSSDDTDWQENLRDWIRS AWDCSKPQCFGHGYVFNKGTLGQVLADGDNSAELSRLALPTTYPVLPYLTNAAYGALSACSTCNNPELNIQGQTFGLLSC INMPESCTPGWTFGEVTQLQANGFVVSGPSTTSGQGNYTSPYIYNDVTNYLRDEKNRPNATFRDASSRRLAAATGVALAE FLQQFNGLAVFTKNTNIRTGIIGTNPRLMLGKIRKWAQDNVGTLFSEFDNINEDIQLLTDFEVQPKCVGQPGIFHLNMRY RPPVRGARINVNMAPALFDNCDR ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 8FOY _struct_ref_seq.pdbx_strand_id D _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 503 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession A0A482MFS8 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 503 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 503 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 'representative helical assembly' ? 24-meric 24 2 'helical asymmetric unit' ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 '(1-24)' A 2 1 A # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support microscopy _pdbx_struct_assembly_auth_evidence.details ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.00000000 0.00000000 -0.00000000 0.00000 0.00000000 1.00000000 0.00000000 0.00000 -0.00000000 0.00000000 1.00000000 0.00000 2 'helical symmetry operation' ? ? 0.48291600 -0.87566700 -0.00000000 292.17899 0.87566700 0.48291600 0.00000000 -75.23952 -0.00000000 0.00000000 1.00000000 -47.86800 3 'helical symmetry operation' ? ? 0.86107900 -0.50847000 -0.00000000 135.81130 0.50847000 0.86107900 0.00000000 -77.53326 -0.00000000 0.00000000 1.00000000 -23.93400 4 'helical symmetry operation' ? ? 0.86107900 0.50847000 -0.00000000 -77.52095 -0.50847000 0.86107900 0.00000000 135.81833 -0.00000000 0.00000000 1.00000000 23.93400 5 'helical symmetry operation' ? ? -0.51689200 -0.85605100 -0.00000000 497.82099 0.85605100 -0.51689200 0.00000000 138.61398 -0.00000000 0.00000000 1.00000000 -47.86800 6 'helical symmetry operation' ? ? -0.00980900 -0.99995200 -0.00000000 421.62358 0.99995200 -0.00980900 0.00000000 2.04872 -0.00000000 0.00000000 1.00000000 -23.93400 7 'helical symmetry operation' ? ? 0.50000000 -0.86602500 -0.00000000 286.57216 0.86602500 0.50000000 0.00000000 -76.80069 -0.00000000 0.00000000 1.00000000 0.00000 8 'helical symmetry operation' ? ? 0.87088800 -0.49148100 -0.00000000 130.18956 0.49148100 0.87088800 0.00000000 -76.02664 -0.00000000 0.00000000 1.00000000 23.93400 9 'helical symmetry operation' ? ? -0.99980800 0.01961600 -0.00000000 415.43943 -0.01961600 -0.99980800 0.00000000 423.63192 -0.00000000 0.00000000 1.00000000 -47.86800 10 'helical symmetry operation' ? ? -0.87088800 -0.49148100 -0.00000000 495.60971 0.49148100 -0.87088800 0.00000000 289.36040 -0.00000000 0.00000000 1.00000000 -23.93400 11 'helical symmetry operation' ? ? -0.50000000 -0.86602500 -0.00000000 496.36960 0.86602500 -0.50000000 0.00000000 132.97773 -0.00000000 0.00000000 1.00000000 -0.00000 12 'helical symmetry operation' ? ? 0.00980900 -0.99995200 -0.00000000 417.50795 0.99995200 0.00980900 0.00000000 -2.06655 -0.00000000 0.00000000 1.00000000 23.93400 13 'helical symmetry operation' ? ? -0.48291600 0.87566700 -0.00000000 127.41587 -0.87566700 -0.48291600 0.00000000 494.79637 -0.00000000 0.00000000 1.00000000 -47.86800 14 'helical symmetry operation' ? ? -0.86107900 0.50847000 -0.00000000 283.78356 -0.50847000 -0.86107900 0.00000000 497.09011 -0.00000000 0.00000000 1.00000000 -23.93400 15 'helical symmetry operation' ? ? -1.00000000 -0.00000000 -0.00000000 419.59487 -0.00000000 -1.00000000 0.00000000 419.55685 -0.00000000 0.00000000 1.00000000 -0.00000 16 'helical symmetry operation' ? ? -0.86107900 -0.50847000 -0.00000000 497.11582 0.50847000 -0.86107900 0.00000000 283.73852 -0.00000000 0.00000000 1.00000000 23.93400 17 'helical symmetry operation' ? ? 0.51689200 0.85605100 -0.00000000 -78.22613 -0.85605100 0.51689200 0.00000000 280.94287 -0.00000000 0.00000000 1.00000000 -47.86800 18 'helical symmetry operation' ? ? 0.00980900 0.99995200 -0.00000000 -2.02872 -0.99995200 0.00980900 0.00000000 417.50813 -0.00000000 0.00000000 1.00000000 -23.93400 19 'helical symmetry operation' ? ? -0.50000000 0.86602500 -0.00000000 133.02270 -0.86602500 -0.50000000 0.00000000 496.35754 -0.00000000 0.00000000 1.00000000 -0.00000 20 'helical symmetry operation' ? ? -0.87088800 0.49148100 -0.00000000 289.40530 -0.49148100 -0.87088800 0.00000000 495.58350 -0.00000000 0.00000000 1.00000000 23.93400 21 'helical symmetry operation' ? ? 0.99980800 -0.01961600 -0.00000000 4.15543 0.01961600 0.99980800 0.00000000 -4.07507 -0.00000000 0.00000000 1.00000000 -47.86800 22 'helical symmetry operation' ? ? 0.87088800 0.49148100 -0.00000000 -76.01485 -0.49148100 0.87088800 0.00000000 130.19645 -0.00000000 0.00000000 1.00000000 -23.93400 23 'helical symmetry operation' ? ? 0.50000000 0.86602500 -0.00000000 -76.77473 -0.86602500 0.50000000 0.00000000 286.57912 -0.00000000 0.00000000 1.00000000 -0.00000 24 'helical symmetry operation' ? ? -0.00980900 0.99995200 -0.00000000 2.08692 -0.99995200 -0.00980900 0.00000000 421.62340 -0.00000000 0.00000000 1.00000000 23.93400 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 53 ? GLY A 59 ? ASP D 53 GLY D 59 1 ? 7 HELX_P HELX_P2 AA2 SER A 62 ? CYS A 75 ? SER D 62 CYS D 75 1 ? 14 HELX_P HELX_P3 AA3 GLU A 117 ? ALA A 121 ? GLU D 117 ALA D 121 5 ? 5 HELX_P HELX_P4 AA4 THR A 131 ? ILE A 143 ? THR D 131 ILE D 143 1 ? 13 HELX_P HELX_P5 AA5 GLY A 166 ? ASN A 170 ? GLY D 166 ASN D 170 5 ? 5 HELX_P HELX_P6 AA6 ASP A 208 ? VAL A 213 ? ASP D 208 VAL D 213 1 ? 6 HELX_P HELX_P7 AA7 ASP A 227 ? TRP A 242 ? ASP D 227 TRP D 242 1 ? 16 HELX_P HELX_P8 AA8 THR A 260 ? ASP A 267 ? THR D 260 ASP D 267 1 ? 8 HELX_P HELX_P9 AA9 LEU A 286 ? CYS A 303 ? LEU D 286 CYS D 303 1 ? 18 HELX_P HELX_P10 AB1 GLN A 311 ? GLY A 316 ? GLN D 311 GLY D 316 1 ? 6 HELX_P HELX_P11 AB2 THR A 332 ? ASN A 342 ? THR D 332 ASN D 342 1 ? 11 HELX_P HELX_P12 AB3 ASP A 384 ? GLN A 403 ? ASP D 384 GLN D 403 1 ? 20 HELX_P HELX_P13 AB4 GLN A 404 ? ASN A 406 ? GLN D 404 ASN D 406 5 ? 3 HELX_P HELX_P14 AB5 ASN A 425 ? ASN A 440 ? ASN D 425 ASN D 440 1 ? 16 HELX_P HELX_P15 AB6 ASN A 450 ? ASP A 454 ? ASN D 450 ASP D 454 1 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 26 SG ? ? ? 1_555 A CYS 303 SG ? ? D CYS 26 D CYS 303 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf2 disulf ? ? A CYS 73 SG ? ? ? 1_555 A CYS 320 SG ? ? D CYS 73 D CYS 320 1_555 ? ? ? ? ? ? ? 2.035 ? ? disulf3 disulf ? ? A CYS 75 SG ? ? ? 1_555 A CYS 300 SG ? ? D CYS 75 D CYS 300 1_555 ? ? ? ? ? ? ? 2.044 ? ? disulf4 disulf ? ? A CYS 217 SG ? ? ? 1_555 A CYS 249 SG ? ? D CYS 217 D CYS 249 1_555 ? ? ? ? ? ? ? 2.026 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLY _struct_mon_prot_cis.label_seq_id 103 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLY _struct_mon_prot_cis.auth_seq_id 103 _struct_mon_prot_cis.auth_asym_id D _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 104 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 104 _struct_mon_prot_cis.pdbx_auth_asym_id_2 D _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -3.10 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 8 ? AA2 ? 4 ? AA3 ? 2 ? AA4 ? 2 ? AA5 ? 2 ? AA6 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? parallel AA1 3 4 ? parallel AA1 4 5 ? parallel AA1 5 6 ? parallel AA1 6 7 ? parallel AA1 7 8 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA3 1 2 ? anti-parallel AA4 1 2 ? anti-parallel AA5 1 2 ? parallel AA6 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 THR A 46 ? VAL A 48 ? THR D 46 VAL D 48 AA1 2 VAL A 81 ? ARG A 86 ? VAL D 81 ARG D 86 AA1 3 ILE A 28 ? GLN A 33 ? ILE D 28 GLN D 33 AA1 4 VAL A 220 ? LEU A 223 ? VAL D 220 LEU D 223 AA1 5 HIS A 252 ? LYS A 258 ? HIS D 252 LYS D 258 AA1 6 LEU A 274 ? LEU A 279 ? LEU D 274 LEU D 279 AA1 7 VAL A 345 ? PRO A 349 ? VAL D 345 PRO D 349 AA1 8 PRO A 361 ? ILE A 363 ? PRO D 361 ILE D 363 AA2 1 TYR A 149 ? ALA A 154 ? TYR D 149 ALA D 154 AA2 2 VAL A 157 ? ALA A 162 ? VAL D 157 ALA D 162 AA2 3 VAL A 96 ? ALA A 102 ? VAL D 96 ALA D 102 AA2 4 THR A 191 ? PHE A 194 ? THR D 191 PHE D 194 AA3 1 GLY A 109 ? LEU A 113 ? GLY D 109 LEU D 113 AA3 2 VAL A 122 ? VAL A 126 ? VAL D 122 VAL D 126 AA4 1 MET A 323 ? PRO A 324 ? MET D 323 PRO D 324 AA4 2 TYR A 358 ? THR A 359 ? TYR D 358 THR D 359 AA5 1 ALA A 409 ? VAL A 410 ? ALA D 409 VAL D 410 AA5 2 GLY A 423 ? THR A 424 ? GLY D 423 THR D 424 AA6 1 ILE A 455 ? THR A 459 ? ILE D 455 THR D 459 AA6 2 PHE A 474 ? MET A 478 ? PHE D 474 MET D 478 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N VAL A 48 ? N VAL D 48 O VAL A 81 ? O VAL D 81 AA1 2 3 O TYR A 82 ? O TYR D 82 N VAL A 30 ? N VAL D 30 AA1 3 4 N LEU A 29 ? N LEU D 29 O VAL A 220 ? O VAL D 220 AA1 4 5 N TYR A 221 ? N TYR D 221 O HIS A 252 ? O HIS D 252 AA1 5 6 N ASN A 257 ? N ASN D 257 O LEU A 277 ? O LEU D 277 AA1 6 7 N ARG A 276 ? N ARG D 276 O VAL A 345 ? O VAL D 345 AA1 7 8 N GLY A 348 ? N GLY D 348 O TYR A 362 ? O TYR D 362 AA2 1 2 N THR A 152 ? N THR D 152 O THR A 159 ? O THR D 159 AA2 2 3 O LEU A 160 ? O LEU D 160 N TYR A 97 ? N TYR D 97 AA2 3 4 N THR A 100 ? N THR D 100 O THR A 193 ? O THR D 193 AA3 1 2 N VAL A 111 ? N VAL D 111 O ILE A 124 ? O ILE D 124 AA4 1 2 N MET A 323 ? N MET D 323 O THR A 359 ? O THR D 359 AA5 1 2 N ALA A 409 ? N ALA D 409 O THR A 424 ? O THR D 424 AA6 1 2 N LEU A 458 ? N LEU D 458 O HIS A 475 ? O HIS D 475 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OE1 _pdbx_validate_close_contact.auth_asym_id_1 D _pdbx_validate_close_contact.auth_comp_id_1 GLU _pdbx_validate_close_contact.auth_seq_id_1 66 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 OH _pdbx_validate_close_contact.auth_asym_id_2 D _pdbx_validate_close_contact.auth_comp_id_2 TYR _pdbx_validate_close_contact.auth_seq_id_2 120 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.19 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CA _pdbx_validate_rmsd_angle.auth_asym_id_1 D _pdbx_validate_rmsd_angle.auth_comp_id_1 CYS _pdbx_validate_rmsd_angle.auth_seq_id_1 249 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CB _pdbx_validate_rmsd_angle.auth_asym_id_2 D _pdbx_validate_rmsd_angle.auth_comp_id_2 CYS _pdbx_validate_rmsd_angle.auth_seq_id_2 249 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 SG _pdbx_validate_rmsd_angle.auth_asym_id_3 D _pdbx_validate_rmsd_angle.auth_comp_id_3 CYS _pdbx_validate_rmsd_angle.auth_seq_id_3 249 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 122.22 _pdbx_validate_rmsd_angle.angle_target_value 114.20 _pdbx_validate_rmsd_angle.angle_deviation 8.02 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.10 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA D 5 ? ? 76.57 -9.24 2 1 ASP D 16 ? ? 59.83 74.15 3 1 PRO D 17 ? ? -85.07 44.46 4 1 ASN D 20 ? ? -96.61 58.76 5 1 SER D 77 ? ? -143.95 35.21 6 1 PRO D 148 ? ? -76.36 43.73 7 1 VAL D 190 ? ? -38.60 128.55 8 1 GLN D 196 ? ? 59.03 75.77 9 1 SER D 201 ? ? -140.10 -154.82 10 1 VAL D 202 ? ? -33.98 128.61 11 1 SER D 224 ? ? -97.59 37.54 12 1 TRP D 242 ? ? -100.41 62.25 13 1 ASN D 270 ? ? -93.54 33.69 14 1 PRO D 329 ? ? -86.38 43.34 15 1 ASN D 342 ? ? -93.33 48.49 16 1 ASP D 366 ? ? -100.15 76.67 17 1 ASN D 369 ? ? -87.42 49.59 18 1 ASP D 373 ? ? -76.22 -166.54 19 1 ASN D 376 ? ? 73.07 -23.55 20 1 ARG D 377 ? ? 9.48 70.53 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 ASN _pdbx_validate_peptide_omega.auth_asym_id_1 D _pdbx_validate_peptide_omega.auth_seq_id_1 376 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 ARG _pdbx_validate_peptide_omega.auth_asym_id_2 D _pdbx_validate_peptide_omega.auth_seq_id_2 377 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega 129.87 # _pdbx_helical_symmetry.entry_id 8FOY _pdbx_helical_symmetry.number_of_operations 24 _pdbx_helical_symmetry.rotation_per_n_subunits -30.56 _pdbx_helical_symmetry.rise_per_n_subunits 23.93 _pdbx_helical_symmetry.n_subunits_divisor 1 _pdbx_helical_symmetry.dyad_axis no _pdbx_helical_symmetry.circular_symmetry 6 # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 8FOY _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_reconstruction.entry_id 8FOY _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 2.9 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 160399 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type HELICAL # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7.4 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source NATURAL _em_entity_assembly.type VIRUS _em_entity_assembly.name 'Agrobacterium phage Milano' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list 1 # _em_imaging.entry_id 8FOY _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 1200 _em_imaging.nominal_defocus_max 2200 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen ? # _em_virus_entity.id 1 _em_virus_entity.virus_host_category ? _em_virus_entity.virus_type VIRION _em_virus_entity.virus_isolate SPECIES _em_virus_entity.entity_assembly_id 1 _em_virus_entity.enveloped YES _em_virus_entity.empty NO _em_virus_entity.details ? # _em_vitrification.entry_id 8FOY _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity ? _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 8FOY _em_experiment.id 1 _em_experiment.reconstruction_method HELICAL _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 D MET 1 ? A MET 1 2 1 Y 1 D ASP 502 ? A ASP 502 3 1 Y 1 D ARG 503 ? A ARG 503 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 PHE N N N N 247 PHE CA C N S 248 PHE C C N N 249 PHE O O N N 250 PHE CB C N N 251 PHE CG C Y N 252 PHE CD1 C Y N 253 PHE CD2 C Y N 254 PHE CE1 C Y N 255 PHE CE2 C Y N 256 PHE CZ C Y N 257 PHE OXT O N N 258 PHE H H N N 259 PHE H2 H N N 260 PHE HA H N N 261 PHE HB2 H N N 262 PHE HB3 H N N 263 PHE HD1 H N N 264 PHE HD2 H N N 265 PHE HE1 H N N 266 PHE HE2 H N N 267 PHE HZ H N N 268 PHE HXT H N N 269 PRO N N N N 270 PRO CA C N S 271 PRO C C N N 272 PRO O O N N 273 PRO CB C N N 274 PRO CG C N N 275 PRO CD C N N 276 PRO OXT O N N 277 PRO H H N N 278 PRO HA H N N 279 PRO HB2 H N N 280 PRO HB3 H N N 281 PRO HG2 H N N 282 PRO HG3 H N N 283 PRO HD2 H N N 284 PRO HD3 H N N 285 PRO HXT H N N 286 SER N N N N 287 SER CA C N S 288 SER C C N N 289 SER O O N N 290 SER CB C N N 291 SER OG O N N 292 SER OXT O N N 293 SER H H N N 294 SER H2 H N N 295 SER HA H N N 296 SER HB2 H N N 297 SER HB3 H N N 298 SER HG H N N 299 SER HXT H N N 300 THR N N N N 301 THR CA C N S 302 THR C C N N 303 THR O O N N 304 THR CB C N R 305 THR OG1 O N N 306 THR CG2 C N N 307 THR OXT O N N 308 THR H H N N 309 THR H2 H N N 310 THR HA H N N 311 THR HB H N N 312 THR HG1 H N N 313 THR HG21 H N N 314 THR HG22 H N N 315 THR HG23 H N N 316 THR HXT H N N 317 TRP N N N N 318 TRP CA C N S 319 TRP C C N N 320 TRP O O N N 321 TRP CB C N N 322 TRP CG C Y N 323 TRP CD1 C Y N 324 TRP CD2 C Y N 325 TRP NE1 N Y N 326 TRP CE2 C Y N 327 TRP CE3 C Y N 328 TRP CZ2 C Y N 329 TRP CZ3 C Y N 330 TRP CH2 C Y N 331 TRP OXT O N N 332 TRP H H N N 333 TRP H2 H N N 334 TRP HA H N N 335 TRP HB2 H N N 336 TRP HB3 H N N 337 TRP HD1 H N N 338 TRP HE1 H N N 339 TRP HE3 H N N 340 TRP HZ2 H N N 341 TRP HZ3 H N N 342 TRP HH2 H N N 343 TRP HXT H N N 344 TYR N N N N 345 TYR CA C N S 346 TYR C C N N 347 TYR O O N N 348 TYR CB C N N 349 TYR CG C Y N 350 TYR CD1 C Y N 351 TYR CD2 C Y N 352 TYR CE1 C Y N 353 TYR CE2 C Y N 354 TYR CZ C Y N 355 TYR OH O N N 356 TYR OXT O N N 357 TYR H H N N 358 TYR H2 H N N 359 TYR HA H N N 360 TYR HB2 H N N 361 TYR HB3 H N N 362 TYR HD1 H N N 363 TYR HD2 H N N 364 TYR HE1 H N N 365 TYR HE2 H N N 366 TYR HH H N N 367 TYR HXT H N N 368 VAL N N N N 369 VAL CA C N S 370 VAL C C N N 371 VAL O O N N 372 VAL CB C N N 373 VAL CG1 C N N 374 VAL CG2 C N N 375 VAL OXT O N N 376 VAL H H N N 377 VAL H2 H N N 378 VAL HA H N N 379 VAL HB H N N 380 VAL HG11 H N N 381 VAL HG12 H N N 382 VAL HG13 H N N 383 VAL HG21 H N N 384 VAL HG22 H N N 385 VAL HG23 H N N 386 VAL HXT H N N 387 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 PHE N CA sing N N 235 PHE N H sing N N 236 PHE N H2 sing N N 237 PHE CA C sing N N 238 PHE CA CB sing N N 239 PHE CA HA sing N N 240 PHE C O doub N N 241 PHE C OXT sing N N 242 PHE CB CG sing N N 243 PHE CB HB2 sing N N 244 PHE CB HB3 sing N N 245 PHE CG CD1 doub Y N 246 PHE CG CD2 sing Y N 247 PHE CD1 CE1 sing Y N 248 PHE CD1 HD1 sing N N 249 PHE CD2 CE2 doub Y N 250 PHE CD2 HD2 sing N N 251 PHE CE1 CZ doub Y N 252 PHE CE1 HE1 sing N N 253 PHE CE2 CZ sing Y N 254 PHE CE2 HE2 sing N N 255 PHE CZ HZ sing N N 256 PHE OXT HXT sing N N 257 PRO N CA sing N N 258 PRO N CD sing N N 259 PRO N H sing N N 260 PRO CA C sing N N 261 PRO CA CB sing N N 262 PRO CA HA sing N N 263 PRO C O doub N N 264 PRO C OXT sing N N 265 PRO CB CG sing N N 266 PRO CB HB2 sing N N 267 PRO CB HB3 sing N N 268 PRO CG CD sing N N 269 PRO CG HG2 sing N N 270 PRO CG HG3 sing N N 271 PRO CD HD2 sing N N 272 PRO CD HD3 sing N N 273 PRO OXT HXT sing N N 274 SER N CA sing N N 275 SER N H sing N N 276 SER N H2 sing N N 277 SER CA C sing N N 278 SER CA CB sing N N 279 SER CA HA sing N N 280 SER C O doub N N 281 SER C OXT sing N N 282 SER CB OG sing N N 283 SER CB HB2 sing N N 284 SER CB HB3 sing N N 285 SER OG HG sing N N 286 SER OXT HXT sing N N 287 THR N CA sing N N 288 THR N H sing N N 289 THR N H2 sing N N 290 THR CA C sing N N 291 THR CA CB sing N N 292 THR CA HA sing N N 293 THR C O doub N N 294 THR C OXT sing N N 295 THR CB OG1 sing N N 296 THR CB CG2 sing N N 297 THR CB HB sing N N 298 THR OG1 HG1 sing N N 299 THR CG2 HG21 sing N N 300 THR CG2 HG22 sing N N 301 THR CG2 HG23 sing N N 302 THR OXT HXT sing N N 303 TRP N CA sing N N 304 TRP N H sing N N 305 TRP N H2 sing N N 306 TRP CA C sing N N 307 TRP CA CB sing N N 308 TRP CA HA sing N N 309 TRP C O doub N N 310 TRP C OXT sing N N 311 TRP CB CG sing N N 312 TRP CB HB2 sing N N 313 TRP CB HB3 sing N N 314 TRP CG CD1 doub Y N 315 TRP CG CD2 sing Y N 316 TRP CD1 NE1 sing Y N 317 TRP CD1 HD1 sing N N 318 TRP CD2 CE2 doub Y N 319 TRP CD2 CE3 sing Y N 320 TRP NE1 CE2 sing Y N 321 TRP NE1 HE1 sing N N 322 TRP CE2 CZ2 sing Y N 323 TRP CE3 CZ3 doub Y N 324 TRP CE3 HE3 sing N N 325 TRP CZ2 CH2 doub Y N 326 TRP CZ2 HZ2 sing N N 327 TRP CZ3 CH2 sing Y N 328 TRP CZ3 HZ3 sing N N 329 TRP CH2 HH2 sing N N 330 TRP OXT HXT sing N N 331 TYR N CA sing N N 332 TYR N H sing N N 333 TYR N H2 sing N N 334 TYR CA C sing N N 335 TYR CA CB sing N N 336 TYR CA HA sing N N 337 TYR C O doub N N 338 TYR C OXT sing N N 339 TYR CB CG sing N N 340 TYR CB HB2 sing N N 341 TYR CB HB3 sing N N 342 TYR CG CD1 doub Y N 343 TYR CG CD2 sing Y N 344 TYR CD1 CE1 sing Y N 345 TYR CD1 HD1 sing N N 346 TYR CD2 CE2 doub Y N 347 TYR CD2 HD2 sing N N 348 TYR CE1 CZ doub Y N 349 TYR CE1 HE1 sing N N 350 TYR CE2 CZ sing Y N 351 TYR CE2 HE2 sing N N 352 TYR CZ OH sing N N 353 TYR OH HH sing N N 354 TYR OXT HXT sing N N 355 VAL N CA sing N N 356 VAL N H sing N N 357 VAL N H2 sing N N 358 VAL CA C sing N N 359 VAL CA CB sing N N 360 VAL CA HA sing N N 361 VAL C O doub N N 362 VAL C OXT sing N N 363 VAL CB CG1 sing N N 364 VAL CB CG2 sing N N 365 VAL CB HB sing N N 366 VAL CG1 HG11 sing N N 367 VAL CG1 HG12 sing N N 368 VAL CG1 HG13 sing N N 369 VAL CG2 HG21 sing N N 370 VAL CG2 HG22 sing N N 371 VAL CG2 HG23 sing N N 372 VAL OXT HXT sing N N 373 # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 1 _em_entity_assembly_naturalsource.ncbi_tax_id 2557550 _em_entity_assembly_naturalsource.organism 'Agrobacterium phage Milano' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? # _em_helical_entity.id 1 _em_helical_entity.image_processing_id 1 _em_helical_entity.details ? _em_helical_entity.axial_symmetry C6 _em_helical_entity.angular_rotation_per_subunit -30.56 _em_helical_entity.axial_rise_per_subunit 23.93 # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 48 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 (6k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? ? ? 'IMAGE ACQUISITION' ? 2 ? ? 1 ? ? MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? ? ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? ? ? ? ? 'MODEL REFINEMENT' ? 8 ? ? ? ? ? OTHER ? 9 ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? ? ? CLASSIFICATION ? 12 1 ? ? ? ? RECONSTRUCTION ? 13 1 ? ? ? ? # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _em_virus_natural_host.entity_assembly_id 1 _em_virus_natural_host.id 1 _em_virus_natural_host.ncbi_tax_id 176299 _em_virus_natural_host.organism 'Agrobacterium fabrum str. C58' _em_virus_natural_host.strain ? # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number GM122510 _pdbx_audit_support.ordinal 1 # _atom_sites.entry_id 8FOY _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_