HEADER HYDROLASE/HYDROLASE INHIBITOR 06-JAN-23 8FQW TITLE ADC-30 IN COMPLEX WITH BORONIC ACID TRANSITION STATE INHIBITOR MB076 COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-LACTAMASE; COMPND 3 CHAIN: B, A; COMPND 4 EC: 3.5.2.6; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ACINETOBACTER BAUMANNII; SOURCE 3 ORGANISM_TAXID: 470; SOURCE 4 GENE: BLAADC-30, AB237_1031; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS BATSI, ACINETOBACTER-DERIVED CEPHALOSPORINASE, HYDROLASE, HYDROLASE- KEYWDS 2 HYDROLASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR R.A.POWERS,B.J.WALLAR,C.M.JUNE,V.J.RUIZ REVDAT 4 25-OCT-23 8FQW 1 REMARK REVDAT 3 26-JUL-23 8FQW 1 JRNL REVDAT 2 12-JUL-23 8FQW 1 JRNL REVDAT 1 05-JUL-23 8FQW 0 JRNL AUTH R.A.POWERS,C.M.JUNE,M.C.FERNANDO,E.R.FISH,O.L.MAURER, JRNL AUTH 2 R.M.BAUMANN,T.J.BEARDSLEY,M.A.TARACILA,S.D.RUDIN,K.M.HUJER, JRNL AUTH 3 A.M.HUJER,N.SANTI,V.VILLAMIL,M.L.INTROVIGNE,F.PRATI, JRNL AUTH 4 E.CASELLI,R.A.BONOMO,B.J.WALLAR JRNL TITL SYNTHESIS OF A NOVEL BORONIC ACID TRANSITION STATE JRNL TITL 2 INHIBITOR, MB076: A HETEROCYCLIC TRIAZOLE EFFECTIVELY JRNL TITL 3 INHIBITS ACINETOBACTER -DERIVED CEPHALOSPORINASE VARIANTS JRNL TITL 4 WITH AN EXPANDED-SUBSTRATE SPECTRUM. JRNL REF J.MED.CHEM. V. 66 8510 2023 JRNL REFN ISSN 0022-2623 JRNL PMID 37358467 JRNL DOI 10.1021/ACS.JMEDCHEM.3C00144 REMARK 2 REMARK 2 RESOLUTION. 1.59 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX V1.19.2 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.59 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.95 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 63.2 REMARK 3 NUMBER OF REFLECTIONS : 54137 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.190 REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.229 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 2715 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.9500 - 4.2300 1.00 4598 227 0.1657 0.1960 REMARK 3 2 4.2300 - 3.3600 0.99 4312 260 0.1486 0.1892 REMARK 3 3 3.3600 - 2.9300 1.00 4354 215 0.1871 0.2447 REMARK 3 4 2.9300 - 2.6600 1.00 4328 228 0.2072 0.2312 REMARK 3 5 2.6600 - 2.4700 1.00 4271 257 0.2036 0.2592 REMARK 3 6 2.4700 - 2.3300 1.00 4293 206 0.1943 0.2280 REMARK 3 7 2.3300 - 2.2100 0.66 2804 151 0.2010 0.2432 REMARK 3 8 2.2100 - 2.1200 1.00 4264 236 0.1952 0.2297 REMARK 3 9 2.1200 - 2.0300 0.97 4116 238 0.2092 0.2654 REMARK 3 10 2.0300 - 1.9600 0.94 4009 181 0.2096 0.2668 REMARK 3 11 1.9600 - 1.9000 0.71 3017 166 0.2425 0.2839 REMARK 3 12 1.9000 - 1.8500 0.37 1586 76 0.2719 0.3807 REMARK 3 13 1.8500 - 1.8000 0.50 2100 112 0.2429 0.2506 REMARK 3 14 1.8000 - 1.7600 0.38 1618 77 0.2778 0.3491 REMARK 3 15 1.7600 - 1.7300 0.25 676 38 0.3238 0.3084 REMARK 3 16 1.7100 - 1.6800 0.15 477 22 0.3522 0.4350 REMARK 3 17 1.6800 - 1.6500 0.08 329 17 0.3189 0.3039 REMARK 3 18 1.6500 - 1.6100 0.04 189 4 0.3648 0.7334 REMARK 3 19 1.6100 - 1.5900 0.02 81 4 0.4342 0.5512 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.690 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 5734 REMARK 3 ANGLE : 0.696 7828 REMARK 3 CHIRALITY : 0.047 864 REMARK 3 PLANARITY : 0.004 1027 REMARK 3 DIHEDRAL : 12.036 2067 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 2 THROUGH 79 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.3162 15.5622 -40.7088 REMARK 3 T TENSOR REMARK 3 T11: 0.0955 T22: 0.0446 REMARK 3 T33: 0.1348 T12: 0.0014 REMARK 3 T13: 0.0403 T23: -0.0047 REMARK 3 L TENSOR REMARK 3 L11: 0.6003 L22: 1.1022 REMARK 3 L33: 1.1927 L12: 0.3344 REMARK 3 L13: -0.3216 L23: -0.0617 REMARK 3 S TENSOR REMARK 3 S11: 0.0108 S12: 0.0287 S13: -0.0013 REMARK 3 S21: -0.1884 S22: 0.0280 S23: -0.2509 REMARK 3 S31: -0.1876 S32: 0.1650 S33: -0.0393 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 80 THROUGH 176 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.1625 -5.4076 -22.9150 REMARK 3 T TENSOR REMARK 3 T11: 0.0829 T22: 0.1578 REMARK 3 T33: 0.1072 T12: 0.0128 REMARK 3 T13: 0.0056 T23: 0.0542 REMARK 3 L TENSOR REMARK 3 L11: 2.2232 L22: 1.8987 REMARK 3 L33: 1.8574 L12: 0.2747 REMARK 3 L13: 0.2182 L23: -0.0894 REMARK 3 S TENSOR REMARK 3 S11: -0.0427 S12: -0.4419 S13: -0.1222 REMARK 3 S21: 0.2844 S22: 0.0249 S23: 0.1131 REMARK 3 S31: -0.0081 S32: -0.1965 S33: 0.0075 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 177 THROUGH 227 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.9829 15.8133 -28.3264 REMARK 3 T TENSOR REMARK 3 T11: 0.0997 T22: 0.0507 REMARK 3 T33: 0.1059 T12: 0.0062 REMARK 3 T13: 0.0237 T23: -0.0166 REMARK 3 L TENSOR REMARK 3 L11: 0.4545 L22: 3.1870 REMARK 3 L33: 1.8828 L12: -1.1921 REMARK 3 L13: 0.0836 L23: -0.6311 REMARK 3 S TENSOR REMARK 3 S11: -0.0692 S12: -0.1311 S13: 0.0522 REMARK 3 S21: 0.2905 S22: 0.1286 S23: -0.0304 REMARK 3 S31: -0.1727 S32: -0.0471 S33: -0.0643 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 228 THROUGH 358 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.6255 0.2843 -41.2570 REMARK 3 T TENSOR REMARK 3 T11: 0.0341 T22: 0.0511 REMARK 3 T33: 0.0973 T12: 0.0101 REMARK 3 T13: 0.0161 T23: -0.0086 REMARK 3 L TENSOR REMARK 3 L11: 0.8426 L22: 1.2633 REMARK 3 L33: 1.3475 L12: 0.3972 REMARK 3 L13: 0.1314 L23: 0.0592 REMARK 3 S TENSOR REMARK 3 S11: -0.0038 S12: 0.0245 S13: -0.1618 REMARK 3 S21: -0.1196 S22: 0.0197 S23: -0.0902 REMARK 3 S31: 0.0893 S32: 0.0595 S33: -0.0123 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2 THROUGH 26 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.1315 -22.0963 -71.0621 REMARK 3 T TENSOR REMARK 3 T11: 0.1853 T22: 0.2145 REMARK 3 T33: 0.1397 T12: -0.0497 REMARK 3 T13: 0.0589 T23: -0.0400 REMARK 3 L TENSOR REMARK 3 L11: 3.7065 L22: 5.7316 REMARK 3 L33: 4.0832 L12: 1.0102 REMARK 3 L13: 2.0323 L23: 0.7598 REMARK 3 S TENSOR REMARK 3 S11: 0.1688 S12: 0.1147 S13: -0.3562 REMARK 3 S21: -0.3509 S22: -0.1517 S23: 0.0831 REMARK 3 S31: 0.4363 S32: -0.5577 S33: -0.0443 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 27 THROUGH 115 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.9141 2.1176 -76.7731 REMARK 3 T TENSOR REMARK 3 T11: 0.6334 T22: 0.2324 REMARK 3 T33: -0.0305 T12: -0.0167 REMARK 3 T13: 0.0654 T23: 0.0896 REMARK 3 L TENSOR REMARK 3 L11: 0.8609 L22: 1.5898 REMARK 3 L33: 1.1355 L12: 0.4028 REMARK 3 L13: -0.6476 L23: -0.3318 REMARK 3 S TENSOR REMARK 3 S11: 0.1181 S12: 0.4696 S13: -0.0144 REMARK 3 S21: -0.6485 S22: -0.0519 S23: 0.1024 REMARK 3 S31: -0.7458 S32: -0.3446 S33: -0.1579 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 116 THROUGH 176 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.9512 13.0811 -76.6252 REMARK 3 T TENSOR REMARK 3 T11: 0.7145 T22: 0.2552 REMARK 3 T33: 0.3340 T12: -0.0946 REMARK 3 T13: 0.2542 T23: 0.0107 REMARK 3 L TENSOR REMARK 3 L11: 0.8672 L22: 0.6778 REMARK 3 L33: 1.3186 L12: 0.1551 REMARK 3 L13: -0.3062 L23: 0.4073 REMARK 3 S TENSOR REMARK 3 S11: 0.1074 S12: 0.2038 S13: 0.4615 REMARK 3 S21: -0.8859 S22: 0.1900 S23: -0.4168 REMARK 3 S31: -0.6735 S32: 0.1602 S33: -0.2997 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 177 THROUGH 239 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.9757 -0.3784 -68.6020 REMARK 3 T TENSOR REMARK 3 T11: 0.2670 T22: 0.1720 REMARK 3 T33: 0.1055 T12: 0.0438 REMARK 3 T13: 0.0123 T23: 0.0095 REMARK 3 L TENSOR REMARK 3 L11: 1.4447 L22: 1.4302 REMARK 3 L33: 2.9155 L12: 0.1586 REMARK 3 L13: 0.0237 L23: -0.7290 REMARK 3 S TENSOR REMARK 3 S11: 0.1229 S12: 0.2497 S13: 0.1373 REMARK 3 S21: -0.3006 S22: 0.0138 S23: 0.0846 REMARK 3 S31: -0.4258 S32: -0.1827 S33: -0.1149 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 240 THROUGH 307 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.9719 -3.8143 -88.5461 REMARK 3 T TENSOR REMARK 3 T11: 0.8396 T22: 0.3637 REMARK 3 T33: 0.0599 T12: -0.1350 REMARK 3 T13: 0.2442 T23: -0.0851 REMARK 3 L TENSOR REMARK 3 L11: 0.9773 L22: 0.9523 REMARK 3 L33: 0.8893 L12: -0.3386 REMARK 3 L13: -0.4211 L23: 0.0374 REMARK 3 S TENSOR REMARK 3 S11: 0.0592 S12: 0.3478 S13: 0.1987 REMARK 3 S21: -0.9344 S22: 0.2137 S23: -0.2446 REMARK 3 S31: -0.3364 S32: -0.1762 S33: -0.0274 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 308 THROUGH 358 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.6474 -12.4844 -78.8338 REMARK 3 T TENSOR REMARK 3 T11: 0.3540 T22: 0.2261 REMARK 3 T33: -0.0034 T12: -0.0313 REMARK 3 T13: 0.0481 T23: -0.0981 REMARK 3 L TENSOR REMARK 3 L11: 1.3624 L22: 0.3473 REMARK 3 L33: 2.2193 L12: -0.0834 REMARK 3 L13: 0.0036 L23: -0.2972 REMARK 3 S TENSOR REMARK 3 S11: -0.0447 S12: 0.3627 S13: -0.1762 REMARK 3 S21: -0.6104 S22: 0.0256 S23: -0.2342 REMARK 3 S31: -0.2066 S32: -0.0251 S33: -0.0117 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8FQW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-JAN-23. REMARK 100 THE DEPOSITION ID IS D_1000270534. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-JUL-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROC REMARK 200 DATA SCALING SOFTWARE : AUTOPROC REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 54143 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.587 REMARK 200 RESOLUTION RANGE LOW (A) : 89.905 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 86.9 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : 0.07700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.59 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.78 REMARK 200 COMPLETENESS FOR SHELL (%) : 57.1 REMARK 200 DATA REDUNDANCY IN SHELL : 7.00 REMARK 200 R MERGE FOR SHELL (I) : 1.12900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4U0X REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 35.62 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.91 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: ADC-30 (3.5 MG/ML) IN 25% W/V REMARK 280 POLYETHYLENE GLYCOL (PEG) 1500, 0.1 M SUCCINATE/ PHOSPHATE/ REMARK 280 GLYCINE, PH 5.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 20.71750 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 89.90450 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.72000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 89.90450 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 20.71750 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 41.72000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B -1 REMARK 465 GLY B 0 REMARK 465 ASN B 1 REMARK 465 LYS B 359 REMARK 465 MET A -1 REMARK 465 GLY A 0 REMARK 465 ASN A 1 REMARK 465 SER A 302 REMARK 465 LYS A 303 REMARK 465 GLU A 304 REMARK 465 LYS A 359 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR B 2 OG1 CG2 REMARK 470 LYS B 10 CG CD CE NZ REMARK 470 GLU B 21 CG CD OE1 OE2 REMARK 470 LYS B 37 CG CD CE NZ REMARK 470 LYS B 51 CG CD CE NZ REMARK 470 LYS B 97 CG CD CE NZ REMARK 470 ASP B 123 CG OD1 OD2 REMARK 470 GLN B 129 CG CD OE1 NE2 REMARK 470 LYS B 160 CG CD CE NZ REMARK 470 LYS B 168 CG CD CE NZ REMARK 470 LYS B 193 CG CD CE NZ REMARK 470 LYS B 297 CG CD CE NZ REMARK 470 LYS B 328 CG CD CE NZ REMARK 470 LYS B 358 CG CD CE NZ REMARK 470 THR A 2 OG1 CG2 REMARK 470 LYS A 4 CG CD CE NZ REMARK 470 GLU A 7 CG CD OE1 OE2 REMARK 470 LYS A 9 CG CD CE NZ REMARK 470 LYS A 10 CG CD CE NZ REMARK 470 GLU A 21 CG CD OE1 OE2 REMARK 470 LYS A 37 CG CD CE NZ REMARK 470 LYS A 78 CG CD CE NZ REMARK 470 LYS A 80 CG CD CE NZ REMARK 470 LYS A 82 CG CD CE NZ REMARK 470 ILE A 83 CG1 CG2 CD1 REMARK 470 SER A 84 OG REMARK 470 PHE A 85 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ASP A 86 CG OD1 OD2 REMARK 470 LYS A 91 CG CD CE NZ REMARK 470 LYS A 94 CG CD CE NZ REMARK 470 LYS A 97 CG CD CE NZ REMARK 470 THR A 99 OG1 CG2 REMARK 470 GLN A 103 CG CD OE1 NE2 REMARK 470 LEU A 107 CG CD1 CD2 REMARK 470 GLN A 108 CG CD OE1 NE2 REMARK 470 GLU A 124 CG CD OE1 OE2 REMARK 470 LYS A 139 CG CD CE NZ REMARK 470 ASN A 142 CG OD1 ND2 REMARK 470 SER A 143 OG REMARK 470 GLU A 146 CG CD OE1 OE2 REMARK 470 LYS A 176 CG CD CE NZ REMARK 470 LYS A 185 CG CD CE NZ REMARK 470 LYS A 193 CG CD CE NZ REMARK 470 LYS A 243 CG CD CE NZ REMARK 470 ASP A 247 CG OD1 OD2 REMARK 470 GLN A 261 CG CD OE1 NE2 REMARK 470 TYR A 266 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS A 297 CG CD CE NZ REMARK 470 VAL A 298 CG1 CG2 REMARK 470 ILE A 301 CG1 CG2 CD1 REMARK 470 GLU A 344 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O LYS A 294 O HOH A 501 2.17 REMARK 500 OG SER B 64 O5 YDB B 401 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR B 112 32.09 73.99 REMARK 500 ASN B 116 57.26 -160.27 REMARK 500 LYS B 141 -69.59 -135.79 REMARK 500 TYR B 222 28.24 -161.66 REMARK 500 ASN B 263 -120.95 59.57 REMARK 500 ASN B 338 36.63 -94.74 REMARK 500 ASP A 86 -12.18 77.14 REMARK 500 ASN A 116 52.17 -167.61 REMARK 500 LYS A 126 -39.67 -132.00 REMARK 500 LYS A 141 -96.90 -134.75 REMARK 500 THR A 177 -58.27 -133.27 REMARK 500 TYR A 222 24.49 -165.64 REMARK 500 TYR A 260 165.57 174.23 REMARK 500 ASN A 263 -123.88 57.08 REMARK 500 MET A 293 -62.52 -102.87 REMARK 500 ASN A 338 35.89 -96.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 810 DISTANCE = 6.36 ANGSTROMS REMARK 525 HOH B 811 DISTANCE = 7.27 ANGSTROMS REMARK 525 HOH A 683 DISTANCE = 6.20 ANGSTROMS DBREF1 8FQW B 0 359 UNP A0A0E1PRG7_ACIBA DBREF2 8FQW B A0A0E1PRG7 37 396 DBREF1 8FQW A 0 359 UNP A0A0E1PRG7_ACIBA DBREF2 8FQW A A0A0E1PRG7 37 396 SEQADV 8FQW MET B -1 UNP A0A0E1PRG INITIATING METHIONINE SEQADV 8FQW MET A -1 UNP A0A0E1PRG INITIATING METHIONINE SEQRES 1 B 361 MET GLY ASN THR PRO LYS ASP GLN GLU ILE LYS LYS LEU SEQRES 2 B 361 VAL ASP GLN ASN PHE LYS PRO LEU LEU GLU LYS TYR ASP SEQRES 3 B 361 VAL PRO GLY MET ALA VAL GLY VAL ILE GLN ASN ASN LYS SEQRES 4 B 361 LYS TYR GLU MET TYR TYR GLY LEU GLN SER VAL GLN ASP SEQRES 5 B 361 LYS LYS ALA VAL ASN SER SER THR ILE PHE GLU LEU GLY SEQRES 6 B 361 SER VAL SER LYS LEU PHE THR ALA THR ALA GLY GLY TYR SEQRES 7 B 361 ALA LYS ASN LYS GLY LYS ILE SER PHE ASP ASP THR PRO SEQRES 8 B 361 GLY LYS TYR TRP LYS GLU LEU LYS ASN THR PRO ILE ASP SEQRES 9 B 361 GLN VAL ASN LEU LEU GLN LEU ALA THR TYR THR SER GLY SEQRES 10 B 361 ASN LEU ALA LEU GLN PHE PRO ASP GLU VAL LYS THR ASP SEQRES 11 B 361 GLN GLN VAL LEU THR PHE PHE LYS ASP TRP LYS PRO LYS SEQRES 12 B 361 ASN SER ILE GLY GLU TYR ARG GLN TYR SER ASN PRO SER SEQRES 13 B 361 ILE GLY LEU PHE GLY LYS VAL VAL ALA LEU SER MET ASN SEQRES 14 B 361 LYS PRO PHE ASP GLN VAL LEU GLU LYS THR ILE PHE PRO SEQRES 15 B 361 ALA LEU GLY LEU LYS HIS SER TYR VAL ASN VAL PRO LYS SEQRES 16 B 361 THR GLN MET GLN ASN TYR ALA PHE GLY TYR ASN GLN GLU SEQRES 17 B 361 ASN GLN PRO ILE ARG VAL ASN PRO GLY PRO LEU ASP ALA SEQRES 18 B 361 PRO ALA TYR GLY VAL LYS SER THR LEU PRO ASP MET LEU SEQRES 19 B 361 SER PHE ILE HIS ALA ASN LEU ASN PRO GLN LYS TYR PRO SEQRES 20 B 361 ALA ASP ILE GLN ARG ALA ILE ASN GLU THR HIS GLN GLY SEQRES 21 B 361 ARG TYR GLN VAL ASN THR MET TYR GLN ALA LEU GLY TRP SEQRES 22 B 361 GLU GLU PHE SER TYR PRO ALA THR LEU GLN THR LEU LEU SEQRES 23 B 361 ASP SER ASN SER GLU GLN ILE VAL MET LYS PRO ASN LYS SEQRES 24 B 361 VAL THR ALA ILE SER LYS GLU PRO SER VAL LYS MET TYR SEQRES 25 B 361 HIS LYS THR GLY SER THR THR GLY PHE GLY THR TYR VAL SEQRES 26 B 361 VAL PHE ILE PRO LYS GLU ASN ILE GLY LEU VAL MET LEU SEQRES 27 B 361 THR ASN LYS ARG ILE PRO ASN GLU GLU ARG ILE LYS ALA SEQRES 28 B 361 ALA TYR ALA VAL LEU ASN ALA ILE LYS LYS SEQRES 1 A 361 MET GLY ASN THR PRO LYS ASP GLN GLU ILE LYS LYS LEU SEQRES 2 A 361 VAL ASP GLN ASN PHE LYS PRO LEU LEU GLU LYS TYR ASP SEQRES 3 A 361 VAL PRO GLY MET ALA VAL GLY VAL ILE GLN ASN ASN LYS SEQRES 4 A 361 LYS TYR GLU MET TYR TYR GLY LEU GLN SER VAL GLN ASP SEQRES 5 A 361 LYS LYS ALA VAL ASN SER SER THR ILE PHE GLU LEU GLY SEQRES 6 A 361 SER VAL SER LYS LEU PHE THR ALA THR ALA GLY GLY TYR SEQRES 7 A 361 ALA LYS ASN LYS GLY LYS ILE SER PHE ASP ASP THR PRO SEQRES 8 A 361 GLY LYS TYR TRP LYS GLU LEU LYS ASN THR PRO ILE ASP SEQRES 9 A 361 GLN VAL ASN LEU LEU GLN LEU ALA THR TYR THR SER GLY SEQRES 10 A 361 ASN LEU ALA LEU GLN PHE PRO ASP GLU VAL LYS THR ASP SEQRES 11 A 361 GLN GLN VAL LEU THR PHE PHE LYS ASP TRP LYS PRO LYS SEQRES 12 A 361 ASN SER ILE GLY GLU TYR ARG GLN TYR SER ASN PRO SER SEQRES 13 A 361 ILE GLY LEU PHE GLY LYS VAL VAL ALA LEU SER MET ASN SEQRES 14 A 361 LYS PRO PHE ASP GLN VAL LEU GLU LYS THR ILE PHE PRO SEQRES 15 A 361 ALA LEU GLY LEU LYS HIS SER TYR VAL ASN VAL PRO LYS SEQRES 16 A 361 THR GLN MET GLN ASN TYR ALA PHE GLY TYR ASN GLN GLU SEQRES 17 A 361 ASN GLN PRO ILE ARG VAL ASN PRO GLY PRO LEU ASP ALA SEQRES 18 A 361 PRO ALA TYR GLY VAL LYS SER THR LEU PRO ASP MET LEU SEQRES 19 A 361 SER PHE ILE HIS ALA ASN LEU ASN PRO GLN LYS TYR PRO SEQRES 20 A 361 ALA ASP ILE GLN ARG ALA ILE ASN GLU THR HIS GLN GLY SEQRES 21 A 361 ARG TYR GLN VAL ASN THR MET TYR GLN ALA LEU GLY TRP SEQRES 22 A 361 GLU GLU PHE SER TYR PRO ALA THR LEU GLN THR LEU LEU SEQRES 23 A 361 ASP SER ASN SER GLU GLN ILE VAL MET LYS PRO ASN LYS SEQRES 24 A 361 VAL THR ALA ILE SER LYS GLU PRO SER VAL LYS MET TYR SEQRES 25 A 361 HIS LYS THR GLY SER THR THR GLY PHE GLY THR TYR VAL SEQRES 26 A 361 VAL PHE ILE PRO LYS GLU ASN ILE GLY LEU VAL MET LEU SEQRES 27 A 361 THR ASN LYS ARG ILE PRO ASN GLU GLU ARG ILE LYS ALA SEQRES 28 A 361 ALA TYR ALA VAL LEU ASN ALA ILE LYS LYS HET YDB B 401 24 HET DMS B 402 10 HET PO4 B 403 5 HET PO4 B 404 5 HET YDB A 401 24 HETNAM YDB 1-[(2R)-2-{2-[(5-AMINO-1,3,4-THIADIAZOL-2-YL) HETNAM 2 YDB SULFANYL]ACETAMIDO}-2-BORONOETHYL]-1H-1,2,3-TRIAZOLE- HETNAM 3 YDB 4-CARBOXYLIC ACID HETNAM DMS DIMETHYL SULFOXIDE HETNAM PO4 PHOSPHATE ION FORMUL 3 YDB 2(C9 H12 B N7 O5 S2) FORMUL 4 DMS C2 H6 O S FORMUL 5 PO4 2(O4 P 3-) FORMUL 8 HOH *494(H2 O) HELIX 1 AA1 PRO B 3 PHE B 16 1 14 HELIX 2 AA2 PHE B 16 ASP B 24 1 9 HELIX 3 AA3 VAL B 65 LYS B 80 1 16 HELIX 4 AA4 THR B 88 TYR B 92 5 5 HELIX 5 AA5 TRP B 93 LYS B 97 5 5 HELIX 6 AA6 THR B 99 VAL B 104 5 6 HELIX 7 AA7 ASN B 105 THR B 111 1 7 HELIX 8 AA8 THR B 127 TRP B 138 1 12 HELIX 9 AA9 SER B 151 MET B 166 1 16 HELIX 10 AB1 PRO B 169 THR B 177 1 9 HELIX 11 AB2 THR B 177 LEU B 182 1 6 HELIX 12 AB3 PRO B 192 TYR B 199 5 8 HELIX 13 AB4 ASP B 218 GLY B 223 1 6 HELIX 14 AB5 THR B 227 ASN B 240 1 14 HELIX 15 AB6 PRO B 241 TYR B 244 5 4 HELIX 16 AB7 PRO B 245 HIS B 256 1 12 HELIX 17 AB8 THR B 279 SER B 286 1 8 HELIX 18 AB9 SER B 288 LYS B 294 1 7 HELIX 19 AC1 PRO B 327 GLU B 329 5 3 HELIX 20 AC2 PRO B 342 ILE B 357 1 16 HELIX 21 AC3 PRO A 3 PHE A 16 1 14 HELIX 22 AC4 PHE A 16 ASP A 24 1 9 HELIX 23 AC5 VAL A 65 LYS A 80 1 16 HELIX 24 AC6 THR A 88 TYR A 92 5 5 HELIX 25 AC7 TRP A 93 LYS A 97 5 5 HELIX 26 AC8 THR A 99 VAL A 104 5 6 HELIX 27 AC9 ASN A 105 THR A 111 1 7 HELIX 28 AD1 THR A 127 ASP A 137 1 11 HELIX 29 AD2 SER A 151 MET A 166 1 16 HELIX 30 AD3 PRO A 169 THR A 177 1 9 HELIX 31 AD4 THR A 177 LEU A 182 1 6 HELIX 32 AD5 PRO A 192 TYR A 199 5 8 HELIX 33 AD6 LEU A 217 GLY A 223 1 7 HELIX 34 AD7 LEU A 228 ASN A 240 1 13 HELIX 35 AD8 PRO A 241 TYR A 244 5 4 HELIX 36 AD9 PRO A 245 THR A 255 1 11 HELIX 37 AE1 THR A 279 SER A 286 1 8 HELIX 38 AE2 SER A 288 MET A 293 1 6 HELIX 39 AE3 PRO A 342 LYS A 358 1 17 SHEET 1 AA1 9 LYS B 52 ALA B 53 0 SHEET 2 AA1 9 LYS B 37 SER B 47 -1 N GLN B 46 O LYS B 52 SHEET 3 AA1 9 GLY B 27 GLN B 34 -1 N VAL B 32 O TYR B 39 SHEET 4 AA1 9 ILE B 331 THR B 337 -1 O LEU B 336 N ALA B 29 SHEET 5 AA1 9 PHE B 319 ILE B 326 -1 N ILE B 326 O ILE B 331 SHEET 6 AA1 9 LYS B 308 THR B 316 -1 N GLY B 314 O THR B 321 SHEET 7 AA1 9 GLU B 272 SER B 275 -1 N PHE B 274 O MET B 309 SHEET 8 AA1 9 MET B 265 GLN B 267 -1 N TYR B 266 O GLU B 273 SHEET 9 AA1 9 TYR B 260 VAL B 262 -1 N VAL B 262 O MET B 265 SHEET 1 AA2 2 PHE B 60 GLU B 61 0 SHEET 2 AA2 2 LYS B 225 SER B 226 -1 O SER B 226 N PHE B 60 SHEET 1 AA3 2 TYR B 147 ARG B 148 0 SHEET 2 AA3 2 ASN B 296 LYS B 297 -1 O ASN B 296 N ARG B 148 SHEET 1 AA4 2 GLY B 202 TYR B 203 0 SHEET 2 AA4 2 PRO B 209 ILE B 210 -1 O ILE B 210 N GLY B 202 SHEET 1 AA5 9 LYS A 52 ALA A 53 0 SHEET 2 AA5 9 LYS A 37 SER A 47 -1 N GLN A 46 O LYS A 52 SHEET 3 AA5 9 GLY A 27 GLN A 34 -1 N MET A 28 O TYR A 43 SHEET 4 AA5 9 ILE A 331 THR A 337 -1 O LEU A 336 N ALA A 29 SHEET 5 AA5 9 PHE A 319 ILE A 326 -1 N ILE A 326 O ILE A 331 SHEET 6 AA5 9 LYS A 308 THR A 316 -1 N GLY A 314 O THR A 321 SHEET 7 AA5 9 GLU A 272 SER A 275 -1 N PHE A 274 O MET A 309 SHEET 8 AA5 9 MET A 265 GLN A 267 -1 N TYR A 266 O GLU A 273 SHEET 9 AA5 9 GLN A 261 VAL A 262 -1 N VAL A 262 O MET A 265 SHEET 1 AA6 2 ILE A 59 GLU A 61 0 SHEET 2 AA6 2 LYS A 225 THR A 227 -1 O SER A 226 N PHE A 60 SHEET 1 AA7 2 TYR A 147 ARG A 148 0 SHEET 2 AA7 2 ASN A 296 LYS A 297 -1 O ASN A 296 N ARG A 148 SHEET 1 AA8 2 GLY A 202 TYR A 203 0 SHEET 2 AA8 2 PRO A 209 ILE A 210 -1 O ILE A 210 N GLY A 202 LINK OG SER B 64 B1 YDB B 401 1555 1555 1.40 LINK OG SER A 64 B1 YDB A 401 1555 1555 1.40 CISPEP 1 TYR B 276 PRO B 277 0 1.81 CISPEP 2 TYR A 276 PRO A 277 0 3.24 CRYST1 41.435 83.440 179.809 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024134 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011985 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005561 0.00000