HEADER CELL ADHESION 09-JAN-23 8FSE TITLE CRYSTAL STRUCTURE OF INTEGRIN BETA-2 TAIL BOUND TO THE FERM-FOLDED TITLE 2 TALIN HEAD DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: INTEGRIN BETA-2,TALIN-1; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: CELL SURFACE ADHESION GLYCOPROTEINS LFA-1/CR3/P150,95 COMPND 5 SUBUNIT BETA,COMPLEMENT RECEPTOR C3 SUBUNIT BETA; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: ITGB2, TLN1, TLN; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS INTEGRIN, BETA-2, TALIN, FERM, COMPLEX, CELL ADHESION EXPDTA X-RAY DIFFRACTION AUTHOR J.WU,T.GAO REVDAT 1 03-JUL-24 8FSE 0 JRNL AUTH T.GAO,S.KABIR,J.WU JRNL TITL STRUCTURE OF TALIN BOUND TO BETA 2 INTEGRIN UNVEILS THE JRNL TITL 2 MOLECULAR MECHANISM OF SPECIES-SPECIFIC INTEGRIN ACTIVATION JRNL REF BIORXIV 2024 JRNL REFN ISSN 2692-8205 JRNL DOI 10.1101/2024.05.28.596271 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.78 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.400 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 77630 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.181 REMARK 3 R VALUE (WORKING SET) : 0.179 REMARK 3 FREE R VALUE : 0.220 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.830 REMARK 3 FREE R VALUE TEST SET COUNT : 3753 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.7800 - 5.6800 0.98 2809 117 0.1722 0.2037 REMARK 3 2 5.6800 - 4.5100 1.00 2823 123 0.1597 0.1757 REMARK 3 3 4.5100 - 3.9400 0.99 2752 143 0.1452 0.1706 REMARK 3 4 3.9400 - 3.5800 1.00 2772 146 0.1574 0.1839 REMARK 3 5 3.5800 - 3.3200 1.00 2786 130 0.1669 0.1833 REMARK 3 6 3.3200 - 3.1300 1.00 2781 151 0.1752 0.2614 REMARK 3 7 3.1300 - 2.9700 1.00 2741 149 0.1804 0.2244 REMARK 3 8 2.9700 - 2.8400 1.00 2747 172 0.1877 0.2245 REMARK 3 9 2.8400 - 2.7300 1.00 2775 121 0.1849 0.2060 REMARK 3 10 2.7300 - 2.6400 1.00 2796 125 0.1806 0.2368 REMARK 3 11 2.6400 - 2.5600 1.00 2729 173 0.1849 0.2200 REMARK 3 12 2.5600 - 2.4800 1.00 2778 131 0.1897 0.2771 REMARK 3 13 2.4800 - 2.4200 1.00 2812 128 0.1849 0.2580 REMARK 3 14 2.4200 - 2.3600 1.00 2714 142 0.1807 0.2226 REMARK 3 15 2.3600 - 2.3100 1.00 2775 141 0.1836 0.2281 REMARK 3 16 2.3100 - 2.2600 1.00 2765 170 0.1806 0.2440 REMARK 3 17 2.2600 - 2.2100 1.00 2718 149 0.1793 0.2092 REMARK 3 18 2.2100 - 2.1700 1.00 2805 111 0.1767 0.2208 REMARK 3 19 2.1700 - 2.1300 1.00 2716 188 0.1858 0.2380 REMARK 3 20 2.1300 - 2.0900 1.00 2750 148 0.1824 0.2439 REMARK 3 21 2.0900 - 2.0600 1.00 2744 150 0.1958 0.2016 REMARK 3 22 2.0600 - 2.0300 0.99 2669 165 0.1925 0.2151 REMARK 3 23 2.0300 - 2.0000 0.99 2780 113 0.1999 0.2674 REMARK 3 24 2.0000 - 1.9700 0.98 2709 127 0.2215 0.2906 REMARK 3 25 1.9700 - 1.9400 0.97 2722 121 0.2451 0.3027 REMARK 3 26 1.9400 - 1.9200 0.96 2696 99 0.2616 0.3446 REMARK 3 27 1.9200 - 1.9000 0.80 2213 120 0.2764 0.3283 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.530 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 6195 REMARK 3 ANGLE : 0.798 8335 REMARK 3 CHIRALITY : 0.052 910 REMARK 3 PLANARITY : 0.005 1070 REMARK 3 DIHEDRAL : 25.556 824 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -16.6952 -31.3495 -19.6929 REMARK 3 T TENSOR REMARK 3 T11: 0.0570 T22: 0.0683 REMARK 3 T33: 0.0569 T12: 0.0125 REMARK 3 T13: -0.0005 T23: 0.0002 REMARK 3 L TENSOR REMARK 3 L11: -0.0247 L22: 0.2357 REMARK 3 L33: 0.0425 L12: 0.0837 REMARK 3 L13: -0.0116 L23: -0.0081 REMARK 3 S TENSOR REMARK 3 S11: -0.0052 S12: -0.0265 S13: 0.0006 REMARK 3 S21: -0.0283 S22: -0.0122 S23: -0.0002 REMARK 3 S31: -0.0011 S32: 0.0006 S33: -0.0097 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8FSE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-JAN-23. REMARK 100 THE DEPOSITION ID IS D_1000271277. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-OCT-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS-II REMARK 200 BEAMLINE : 17-ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.92010 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 77701 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 3.200 REMARK 200 R MERGE (I) : 0.13300 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 8.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.93 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.7 REMARK 200 DATA REDUNDANCY IN SHELL : 2.20 REMARK 200 R MERGE FOR SHELL (I) : 0.43200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.77 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.66 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG4000 16%, NACL 0.1M, DTT 2MM, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 300K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 55.17900 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -10 REMARK 465 MET A 164 REMARK 465 GLU A 165 REMARK 465 GLU A 166 REMARK 465 LYS A 167 REMARK 465 LYS A 168 REMARK 465 ASP A 169 REMARK 465 SER A 405 REMARK 465 LYS A 406 REMARK 465 ASP A 407 REMARK 465 HIS A 408 REMARK 465 PHE A 409 REMARK 465 GLY A 410 REMARK 465 LEU A 411 REMARK 465 GLU A 412 REMARK 465 GLY A 413 REMARK 465 ASP A 414 REMARK 465 GLU A 415 REMARK 465 GLU A 416 REMARK 465 SER A 417 REMARK 465 THR A 418 REMARK 465 MET A 419 REMARK 465 LEU A 420 REMARK 465 GLU A 421 REMARK 465 ASP A 422 REMARK 465 SER A 423 REMARK 465 VAL A 424 REMARK 465 SER A 425 REMARK 465 PRO A 426 REMARK 465 LYS A 427 REMARK 465 LYS A 428 REMARK 465 SER A 429 REMARK 465 THR A 430 REMARK 465 MET B -10 REMARK 465 GLU B 165 REMARK 465 GLU B 166 REMARK 465 LYS B 167 REMARK 465 LYS B 168 REMARK 465 ASP B 169 REMARK 465 LYS B 404 REMARK 465 SER B 405 REMARK 465 LYS B 406 REMARK 465 ASP B 407 REMARK 465 HIS B 408 REMARK 465 PHE B 409 REMARK 465 GLY B 410 REMARK 465 LEU B 411 REMARK 465 GLU B 412 REMARK 465 GLY B 413 REMARK 465 ASP B 414 REMARK 465 GLU B 415 REMARK 465 GLU B 416 REMARK 465 SER B 417 REMARK 465 THR B 418 REMARK 465 MET B 419 REMARK 465 LEU B 420 REMARK 465 GLU B 421 REMARK 465 ASP B 422 REMARK 465 SER B 423 REMARK 465 VAL B 424 REMARK 465 SER B 425 REMARK 465 PRO B 426 REMARK 465 LYS B 427 REMARK 465 LYS B 428 REMARK 465 SER B 429 REMARK 465 THR B 430 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A -9 CG OD1 ND2 REMARK 470 ASN A 12 CG OD1 ND2 REMARK 470 GLU A 170 CG CD OE1 OE2 REMARK 470 LEU A 171 CG CD1 CD2 REMARK 470 GLN A 202 CG CD OE1 NE2 REMARK 470 ASN A 203 CG OD1 ND2 REMARK 470 ARG A 207 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 320 CG CD CE NZ REMARK 470 LYS A 322 CG CD CE NZ REMARK 470 LYS A 404 CG CD CE NZ REMARK 470 MET B 134 CG SD CE REMARK 470 GLU B 170 CG CD OE1 OE2 REMARK 470 LEU B 171 CG CD1 CD2 REMARK 470 ARG B 207 CG CD NE CZ NH1 NH2 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 ARG A 30 CD NE CZ NH1 NH2 REMARK 480 LYS A 268 CG CD CE NZ REMARK 480 ARG A 277 CG CD NE CZ NH1 NH2 REMARK 480 LYS A 324 CG CD CE NZ REMARK 480 ARG B 30 CD NE CZ NH1 NH2 REMARK 480 LYS B 263 CD CE NZ REMARK 480 LYS B 268 CG CD CE NZ REMARK 480 ARG B 277 CG CD NE CZ NH1 NH2 REMARK 480 LYS B 322 CD CE NZ REMARK 480 LYS B 324 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 812 O HOH A 911 1.82 REMARK 500 OE1 GLN B 387 O HOH B 501 1.84 REMARK 500 O HOH B 786 O HOH B 916 1.88 REMARK 500 O HOH B 521 O HOH B 875 1.89 REMARK 500 O HOH B 682 O HOH B 869 1.90 REMARK 500 O HOH B 771 O HOH B 838 1.91 REMARK 500 O HOH B 803 O HOH B 888 1.91 REMARK 500 O HOH A 833 O HOH A 871 1.93 REMARK 500 O HOH A 854 O HOH A 860 1.95 REMARK 500 O HOH A 864 O HOH A 947 1.96 REMARK 500 SD MET B 111 O HOH B 860 1.96 REMARK 500 OE1 GLN B 202 O HOH B 502 1.96 REMARK 500 O HOH B 810 O HOH B 909 1.97 REMARK 500 O HOH B 708 O HOH B 710 2.01 REMARK 500 O HOH A 745 O HOH B 583 2.02 REMARK 500 O HOH A 985 O HOH A 988 2.02 REMARK 500 OE1 GLU A 80 O HOH A 501 2.04 REMARK 500 NE ARG A 33 O HOH A 502 2.04 REMARK 500 O HOH B 862 O HOH B 942 2.04 REMARK 500 NH1 ARG A 118 O HOH A 503 2.06 REMARK 500 NZ LYS A 306 O HOH A 504 2.06 REMARK 500 O HOH A 841 O HOH B 967 2.08 REMARK 500 O HOH B 686 O HOH B 921 2.08 REMARK 500 O HOH B 934 O HOH B 954 2.09 REMARK 500 O HOH B 569 O HOH B 945 2.10 REMARK 500 O HOH A 778 O HOH A 828 2.10 REMARK 500 OE1 GLN A 85 O HOH A 505 2.10 REMARK 500 OE2 GLU A 269 O HOH A 506 2.12 REMARK 500 O HOH A 523 O HOH A 814 2.12 REMARK 500 O HOH B 836 O HOH B 903 2.13 REMARK 500 O HOH A 984 O HOH A 987 2.14 REMARK 500 O ASP B 205 O HOH B 503 2.15 REMARK 500 O HOH B 783 O HOH B 827 2.17 REMARK 500 N ASN A -9 O HOH A 507 2.17 REMARK 500 O HOH A 837 O HOH A 948 2.17 REMARK 500 O HOH A 772 O HOH A 803 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 547 O HOH B 898 1455 1.91 REMARK 500 O HOH A 797 O HOH B 972 2444 2.05 REMARK 500 O HOH A 603 O HOH B 948 2445 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 41 22.22 -76.67 REMARK 500 MET A 289 134.85 -39.20 REMARK 500 GLU B 132 55.62 -118.44 REMARK 500 LYS B 402 34.34 -74.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 988 DISTANCE = 6.62 ANGSTROMS REMARK 525 HOH A 989 DISTANCE = 6.75 ANGSTROMS DBREF 8FSE A -9 0 UNP P11835 ITB2_MOUSE 750 759 DBREF 8FSE A 1 430 UNP P26039 TLN1_MOUSE 1 430 DBREF 8FSE B -9 0 UNP P11835 ITB2_MOUSE 750 759 DBREF 8FSE B 1 430 UNP P26039 TLN1_MOUSE 1 430 SEQADV 8FSE MET A -10 UNP P11835 INITIATING METHIONINE SEQADV 8FSE A UNP P26039 ASP 139 DELETION SEQADV 8FSE A UNP P26039 GLU 140 DELETION SEQADV 8FSE A UNP P26039 GLY 141 DELETION SEQADV 8FSE A UNP P26039 THR 142 DELETION SEQADV 8FSE A UNP P26039 GLY 143 DELETION SEQADV 8FSE A UNP P26039 THR 144 DELETION SEQADV 8FSE A UNP P26039 LEU 145 DELETION SEQADV 8FSE A UNP P26039 ARG 146 DELETION SEQADV 8FSE A UNP P26039 LYS 147 DELETION SEQADV 8FSE A UNP P26039 ASP 148 DELETION SEQADV 8FSE A UNP P26039 LYS 149 DELETION SEQADV 8FSE A UNP P26039 THR 150 DELETION SEQADV 8FSE A UNP P26039 LEU 151 DELETION SEQADV 8FSE A UNP P26039 LEU 152 DELETION SEQADV 8FSE A UNP P26039 ARG 153 DELETION SEQADV 8FSE A UNP P26039 ASP 154 DELETION SEQADV 8FSE A UNP P26039 GLU 155 DELETION SEQADV 8FSE A UNP P26039 LYS 156 DELETION SEQADV 8FSE A UNP P26039 LYS 157 DELETION SEQADV 8FSE A UNP P26039 MET 158 DELETION SEQADV 8FSE A UNP P26039 GLU 159 DELETION SEQADV 8FSE A UNP P26039 LYS 160 DELETION SEQADV 8FSE A UNP P26039 LEU 161 DELETION SEQADV 8FSE A UNP P26039 LYS 162 DELETION SEQADV 8FSE A UNP P26039 GLN 163 DELETION SEQADV 8FSE A UNP P26039 LYS 164 DELETION SEQADV 8FSE A UNP P26039 LEU 165 DELETION SEQADV 8FSE A UNP P26039 HIS 166 DELETION SEQADV 8FSE A UNP P26039 THR 167 DELETION SEQADV 8FSE A UNP P26039 ASP 168 DELETION SEQADV 8FSE MET B -10 UNP P11835 INITIATING METHIONINE SEQADV 8FSE B UNP P26039 ASP 139 DELETION SEQADV 8FSE B UNP P26039 GLU 140 DELETION SEQADV 8FSE B UNP P26039 GLY 141 DELETION SEQADV 8FSE B UNP P26039 THR 142 DELETION SEQADV 8FSE B UNP P26039 GLY 143 DELETION SEQADV 8FSE B UNP P26039 THR 144 DELETION SEQADV 8FSE B UNP P26039 LEU 145 DELETION SEQADV 8FSE B UNP P26039 ARG 146 DELETION SEQADV 8FSE B UNP P26039 LYS 147 DELETION SEQADV 8FSE B UNP P26039 ASP 148 DELETION SEQADV 8FSE B UNP P26039 LYS 149 DELETION SEQADV 8FSE B UNP P26039 THR 150 DELETION SEQADV 8FSE B UNP P26039 LEU 151 DELETION SEQADV 8FSE B UNP P26039 LEU 152 DELETION SEQADV 8FSE B UNP P26039 ARG 153 DELETION SEQADV 8FSE B UNP P26039 ASP 154 DELETION SEQADV 8FSE B UNP P26039 GLU 155 DELETION SEQADV 8FSE B UNP P26039 LYS 156 DELETION SEQADV 8FSE B UNP P26039 LYS 157 DELETION SEQADV 8FSE B UNP P26039 MET 158 DELETION SEQADV 8FSE B UNP P26039 GLU 159 DELETION SEQADV 8FSE B UNP P26039 LYS 160 DELETION SEQADV 8FSE B UNP P26039 LEU 161 DELETION SEQADV 8FSE B UNP P26039 LYS 162 DELETION SEQADV 8FSE B UNP P26039 GLN 163 DELETION SEQADV 8FSE B UNP P26039 LYS 164 DELETION SEQADV 8FSE B UNP P26039 LEU 165 DELETION SEQADV 8FSE B UNP P26039 HIS 166 DELETION SEQADV 8FSE B UNP P26039 THR 167 DELETION SEQADV 8FSE B UNP P26039 ASP 168 DELETION SEQRES 1 A 411 MET ASN ASN ASP ASN PRO LEU PHE LYS SER ALA MET VAL SEQRES 2 A 411 ALA LEU SER LEU LYS ILE SER ILE GLY ASN VAL VAL LYS SEQRES 3 A 411 THR MET GLN PHE GLU PRO SER THR MET VAL TYR ASP ALA SEQRES 4 A 411 CYS ARG MET ILE ARG GLU ARG ILE PRO GLU ALA LEU ALA SEQRES 5 A 411 GLY PRO PRO ASN ASP PHE GLY LEU PHE LEU SER ASP ASP SEQRES 6 A 411 ASP PRO LYS LYS GLY ILE TRP LEU GLU ALA GLY LYS ALA SEQRES 7 A 411 LEU ASP TYR TYR MET LEU ARG ASN GLY ASP THR MET GLU SEQRES 8 A 411 TYR ARG LYS LYS GLN ARG PRO LEU LYS ILE ARG MET LEU SEQRES 9 A 411 ASP GLY THR VAL LYS THR ILE MET VAL ASP ASP SER LYS SEQRES 10 A 411 THR VAL THR ASP MET LEU MET THR ILE CYS ALA ARG ILE SEQRES 11 A 411 GLY ILE THR ASN HIS ASP GLU TYR SER LEU VAL ARG GLU SEQRES 12 A 411 LEU MET GLU GLU LYS LYS ASP GLU LEU ASN TRP LEU ASP SEQRES 13 A 411 HIS GLY ARG THR LEU ARG GLU GLN GLY VAL GLU GLU HIS SEQRES 14 A 411 GLU THR LEU LEU LEU ARG ARG LYS PHE PHE TYR SER ASP SEQRES 15 A 411 GLN ASN VAL ASP SER ARG ASP PRO VAL GLN LEU ASN LEU SEQRES 16 A 411 LEU TYR VAL GLN ALA ARG ASP ASP ILE LEU ASN GLY SER SEQRES 17 A 411 HIS PRO VAL SER PHE ASP LYS ALA CYS GLU PHE ALA GLY SEQRES 18 A 411 PHE GLN CYS GLN ILE GLN PHE GLY PRO HIS ASN GLU GLN SEQRES 19 A 411 LYS HIS LYS ALA GLY PHE LEU ASP LEU LYS ASP PHE LEU SEQRES 20 A 411 PRO LYS GLU TYR VAL LYS GLN LYS GLY GLU ARG LYS ILE SEQRES 21 A 411 PHE GLN ALA HIS LYS ASN CYS GLY GLN MET SER GLU ILE SEQRES 22 A 411 GLU ALA LYS VAL ARG TYR VAL LYS LEU ALA ARG SER LEU SEQRES 23 A 411 LYS THR TYR GLY VAL SER PHE PHE LEU VAL LYS GLU LYS SEQRES 24 A 411 MET LYS GLY LYS ASN LYS LEU VAL PRO ARG LEU LEU GLY SEQRES 25 A 411 ILE THR LYS GLU CYS VAL MET ARG VAL ASP GLU LYS THR SEQRES 26 A 411 LYS GLU VAL ILE GLN GLU TRP SER LEU THR ASN ILE LYS SEQRES 27 A 411 ARG TRP ALA ALA SER PRO LYS SER PHE THR LEU ASP PHE SEQRES 28 A 411 GLY ASP TYR GLN ASP GLY TYR TYR SER VAL GLN THR THR SEQRES 29 A 411 GLU GLY GLU GLN ILE ALA GLN LEU ILE ALA GLY TYR ILE SEQRES 30 A 411 ASP ILE ILE LEU LYS LYS LYS LYS SER LYS ASP HIS PHE SEQRES 31 A 411 GLY LEU GLU GLY ASP GLU GLU SER THR MET LEU GLU ASP SEQRES 32 A 411 SER VAL SER PRO LYS LYS SER THR SEQRES 1 B 411 MET ASN ASN ASP ASN PRO LEU PHE LYS SER ALA MET VAL SEQRES 2 B 411 ALA LEU SER LEU LYS ILE SER ILE GLY ASN VAL VAL LYS SEQRES 3 B 411 THR MET GLN PHE GLU PRO SER THR MET VAL TYR ASP ALA SEQRES 4 B 411 CYS ARG MET ILE ARG GLU ARG ILE PRO GLU ALA LEU ALA SEQRES 5 B 411 GLY PRO PRO ASN ASP PHE GLY LEU PHE LEU SER ASP ASP SEQRES 6 B 411 ASP PRO LYS LYS GLY ILE TRP LEU GLU ALA GLY LYS ALA SEQRES 7 B 411 LEU ASP TYR TYR MET LEU ARG ASN GLY ASP THR MET GLU SEQRES 8 B 411 TYR ARG LYS LYS GLN ARG PRO LEU LYS ILE ARG MET LEU SEQRES 9 B 411 ASP GLY THR VAL LYS THR ILE MET VAL ASP ASP SER LYS SEQRES 10 B 411 THR VAL THR ASP MET LEU MET THR ILE CYS ALA ARG ILE SEQRES 11 B 411 GLY ILE THR ASN HIS ASP GLU TYR SER LEU VAL ARG GLU SEQRES 12 B 411 LEU MET GLU GLU LYS LYS ASP GLU LEU ASN TRP LEU ASP SEQRES 13 B 411 HIS GLY ARG THR LEU ARG GLU GLN GLY VAL GLU GLU HIS SEQRES 14 B 411 GLU THR LEU LEU LEU ARG ARG LYS PHE PHE TYR SER ASP SEQRES 15 B 411 GLN ASN VAL ASP SER ARG ASP PRO VAL GLN LEU ASN LEU SEQRES 16 B 411 LEU TYR VAL GLN ALA ARG ASP ASP ILE LEU ASN GLY SER SEQRES 17 B 411 HIS PRO VAL SER PHE ASP LYS ALA CYS GLU PHE ALA GLY SEQRES 18 B 411 PHE GLN CYS GLN ILE GLN PHE GLY PRO HIS ASN GLU GLN SEQRES 19 B 411 LYS HIS LYS ALA GLY PHE LEU ASP LEU LYS ASP PHE LEU SEQRES 20 B 411 PRO LYS GLU TYR VAL LYS GLN LYS GLY GLU ARG LYS ILE SEQRES 21 B 411 PHE GLN ALA HIS LYS ASN CYS GLY GLN MET SER GLU ILE SEQRES 22 B 411 GLU ALA LYS VAL ARG TYR VAL LYS LEU ALA ARG SER LEU SEQRES 23 B 411 LYS THR TYR GLY VAL SER PHE PHE LEU VAL LYS GLU LYS SEQRES 24 B 411 MET LYS GLY LYS ASN LYS LEU VAL PRO ARG LEU LEU GLY SEQRES 25 B 411 ILE THR LYS GLU CYS VAL MET ARG VAL ASP GLU LYS THR SEQRES 26 B 411 LYS GLU VAL ILE GLN GLU TRP SER LEU THR ASN ILE LYS SEQRES 27 B 411 ARG TRP ALA ALA SER PRO LYS SER PHE THR LEU ASP PHE SEQRES 28 B 411 GLY ASP TYR GLN ASP GLY TYR TYR SER VAL GLN THR THR SEQRES 29 B 411 GLU GLY GLU GLN ILE ALA GLN LEU ILE ALA GLY TYR ILE SEQRES 30 B 411 ASP ILE ILE LEU LYS LYS LYS LYS SER LYS ASP HIS PHE SEQRES 31 B 411 GLY LEU GLU GLY ASP GLU GLU SER THR MET LEU GLU ASP SEQRES 32 B 411 SER VAL SER PRO LYS LYS SER THR FORMUL 3 HOH *984(H2 O) HELIX 1 AA1 MET A 24 ILE A 36 1 13 HELIX 2 AA2 PRO A 37 ALA A 41 5 5 HELIX 3 AA3 PRO A 43 ASN A 45 5 3 HELIX 4 AA4 ASP A 55 GLY A 59 5 5 HELIX 5 AA5 ALA A 67 MET A 72 5 6 HELIX 6 AA6 THR A 107 ILE A 119 1 13 HELIX 7 AA7 ASN A 123 ASP A 125 5 3 HELIX 8 AA8 LEU A 180 GLY A 184 5 5 HELIX 9 AA9 ASP A 208 ASN A 225 1 18 HELIX 10 AB1 SER A 231 GLY A 248 1 18 HELIX 11 AB2 ASP A 261 PHE A 265 5 5 HELIX 12 AB3 PRO A 267 VAL A 271 5 5 HELIX 13 AB4 LYS A 272 GLN A 273 5 2 HELIX 14 AB5 LYS A 274 CYS A 286 1 13 HELIX 15 AB6 SER A 290 SER A 304 1 15 HELIX 16 AB7 THR A 354 ILE A 356 5 3 HELIX 17 AB8 PHE A 370 GLN A 374 5 5 HELIX 18 AB9 GLU A 384 LYS A 404 1 21 HELIX 19 AC1 MET B 24 ILE B 36 1 13 HELIX 20 AC2 PRO B 37 ALA B 41 5 5 HELIX 21 AC3 PRO B 43 ASN B 45 5 3 HELIX 22 AC4 ASP B 55 GLY B 59 5 5 HELIX 23 AC5 ALA B 67 MET B 72 5 6 HELIX 24 AC6 THR B 107 ILE B 119 1 13 HELIX 25 AC7 ASN B 123 ASP B 125 5 3 HELIX 26 AC8 LEU B 180 GLY B 184 5 5 HELIX 27 AC9 ASP B 208 ASN B 225 1 18 HELIX 28 AD1 SER B 231 GLY B 248 1 18 HELIX 29 AD2 ASP B 261 PHE B 265 5 5 HELIX 30 AD3 PRO B 267 VAL B 271 5 5 HELIX 31 AD4 LYS B 272 GLN B 273 5 2 HELIX 32 AD5 LYS B 274 ASN B 285 1 12 HELIX 33 AD6 SER B 290 LEU B 305 1 16 HELIX 34 AD7 THR B 354 ILE B 356 5 3 HELIX 35 AD8 PHE B 370 GLN B 374 5 5 HELIX 36 AD9 GLU B 384 LYS B 402 1 19 SHEET 1 AA1 5 VAL A 13 PHE A 19 0 SHEET 2 AA1 5 LEU A 4 ILE A 10 -1 N ILE A 8 O LYS A 15 SHEET 3 AA1 5 THR A 78 LYS A 83 1 O MET A 79 N LYS A 7 SHEET 4 AA1 5 PHE A 47 LEU A 51 -1 N PHE A 50 O GLU A 80 SHEET 5 AA1 5 ILE A 60 TRP A 61 -1 O ILE A 60 N LEU A 51 SHEET 1 AA2 4 VAL A 97 ASP A 103 0 SHEET 2 AA2 4 GLN A 85 ARG A 91 -1 N ILE A 90 O LYS A 98 SHEET 3 AA2 4 LEU A 191 ARG A 195 1 O LEU A 191 N ARG A 91 SHEET 4 AA2 4 TYR A 127 VAL A 130 -1 N VAL A 130 O LEU A 192 SHEET 1 AA3 4 SER A 311 GLU A 317 0 SHEET 2 AA3 4 VAL A 326 ILE A 332 -1 O LEU A 330 N PHE A 313 SHEET 3 AA3 4 CYS A 336 VAL A 340 -1 O MET A 338 N GLY A 331 SHEET 4 AA3 4 VAL A 347 SER A 352 -1 O GLN A 349 N ARG A 339 SHEET 1 AA4 3 ARG A 358 ALA A 361 0 SHEET 2 AA4 3 SER A 365 ASP A 369 -1 O ASP A 369 N ARG A 358 SHEET 3 AA4 3 TYR A 378 GLN A 381 -1 O VAL A 380 N PHE A 366 SHEET 1 AA5 5 VAL B 13 PHE B 19 0 SHEET 2 AA5 5 LEU B 4 ILE B 10 -1 N ILE B 8 O LYS B 15 SHEET 3 AA5 5 THR B 78 LYS B 83 1 O TYR B 81 N SER B 9 SHEET 4 AA5 5 PHE B 47 LEU B 51 -1 N PHE B 50 O GLU B 80 SHEET 5 AA5 5 ILE B 60 TRP B 61 -1 O ILE B 60 N LEU B 51 SHEET 1 AA6 4 VAL B 97 ASP B 103 0 SHEET 2 AA6 4 GLN B 85 ARG B 91 -1 N ILE B 90 O LYS B 98 SHEET 3 AA6 4 LEU B 191 ARG B 195 1 O LEU B 191 N ARG B 91 SHEET 4 AA6 4 TYR B 127 VAL B 130 -1 N VAL B 130 O LEU B 192 SHEET 1 AA7 4 SER B 311 GLU B 317 0 SHEET 2 AA7 4 VAL B 326 ILE B 332 -1 O VAL B 326 N GLU B 317 SHEET 3 AA7 4 CYS B 336 VAL B 340 -1 O MET B 338 N GLY B 331 SHEET 4 AA7 4 VAL B 347 SER B 352 -1 O TRP B 351 N VAL B 337 SHEET 1 AA8 3 ARG B 358 ALA B 361 0 SHEET 2 AA8 3 SER B 365 ASP B 369 -1 O ASP B 369 N ARG B 358 SHEET 3 AA8 3 TYR B 378 GLN B 381 -1 O TYR B 378 N LEU B 368 CRYST1 66.862 110.358 68.368 90.00 90.04 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014956 0.000000 0.000011 0.00000 SCALE2 0.000000 0.009061 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014627 0.00000