HEADER VIRAL PROTEIN 10-JAN-23 8FSJ TITLE CRYO-EM STRUCTURE OF ENGINEERED HEPATITIS C VIRUS E1E2 ECTODOMAIN IN TITLE 2 COMPLEX WITH ANTIBODIES AR4A, HEPC74, AND IGH520 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HCV E2 ECTODOMAIN, SYNZIP2 SCAFFOLD FUSION; COMPND 3 CHAIN: E; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: HEPC74 HEAVY CHAIN; COMPND 7 CHAIN: H; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: HEPC74 LIGHT CHAIN; COMPND 11 CHAIN: L; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 4; COMPND 14 MOLECULE: HCV E1 ECTODOMAIN, SYNZIP1 SCAFFOLD FUSION; COMPND 15 CHAIN: A; COMPND 16 FRAGMENT: RESIDUES 22-179; COMPND 17 ENGINEERED: YES; COMPND 18 MOL_ID: 5; COMPND 19 MOLECULE: AR4A LIGHT CHAIN; COMPND 20 CHAIN: B; COMPND 21 ENGINEERED: YES; COMPND 22 MOL_ID: 6; COMPND 23 MOLECULE: AR4A HEAVY CHAIN; COMPND 24 CHAIN: C; COMPND 25 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HEPACIVIRUS C, SYNTHETIC CONSTRUCT; SOURCE 3 ORGANISM_TAXID: 11103, 32630; SOURCE 4 STRAIN: 1B09; SOURCE 5 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 6 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: HEK293; SOURCE 9 EXPRESSION_SYSTEM_TISSUE: KIDNEY; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PCMV; SOURCE 12 MOL_ID: 2; SOURCE 13 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 14 ORGANISM_COMMON: HUMAN; SOURCE 15 ORGANISM_TAXID: 9606; SOURCE 16 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 17 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 18 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 19 EXPRESSION_SYSTEM_CELL_LINE: HEK293; SOURCE 20 EXPRESSION_SYSTEM_TISSUE: KIDNEY; SOURCE 21 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 22 EXPRESSION_SYSTEM_PLASMID: PCMV; SOURCE 23 MOL_ID: 3; SOURCE 24 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 25 ORGANISM_COMMON: HUMAN; SOURCE 26 ORGANISM_TAXID: 9606; SOURCE 27 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 28 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 29 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 30 EXPRESSION_SYSTEM_CELL_LINE: HEK293; SOURCE 31 EXPRESSION_SYSTEM_TISSUE: KIDNEY; SOURCE 32 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 33 EXPRESSION_SYSTEM_PLASMID: PCMV; SOURCE 34 MOL_ID: 4; SOURCE 35 ORGANISM_SCIENTIFIC: HEPACIVIRUS C, SYNTHETIC CONSTRUCT; SOURCE 36 ORGANISM_TAXID: 11103, 32630; SOURCE 37 STRAIN: 1B09; SOURCE 38 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 39 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 40 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 41 EXPRESSION_SYSTEM_CELL_LINE: HEK293; SOURCE 42 EXPRESSION_SYSTEM_TISSUE: KIDNEY; SOURCE 43 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 44 EXPRESSION_SYSTEM_PLASMID: PCMV; SOURCE 45 MOL_ID: 5; SOURCE 46 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 47 ORGANISM_COMMON: HUMAN; SOURCE 48 ORGANISM_TAXID: 9606; SOURCE 49 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 50 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 51 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 52 EXPRESSION_SYSTEM_CELL_LINE: HEK293; SOURCE 53 EXPRESSION_SYSTEM_TISSUE: KIDNEY; SOURCE 54 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 55 EXPRESSION_SYSTEM_PLASMID: PCMV; SOURCE 56 MOL_ID: 6; SOURCE 57 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 58 ORGANISM_COMMON: HUMAN; SOURCE 59 ORGANISM_TAXID: 9606; SOURCE 60 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 61 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 62 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 63 EXPRESSION_SYSTEM_CELL_LINE: HEK293; SOURCE 64 EXPRESSION_SYSTEM_TISSUE: KIDNEY; SOURCE 65 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 66 EXPRESSION_SYSTEM_PLASMID: PCMV KEYWDS HCV, E1E2, VIRAL PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR M.C.METCALF,G.OFEK REVDAT 1 19-JUL-23 8FSJ 0 JRNL AUTH M.C.METCALF,B.M.JANUS,R.YIN,R.WANG,J.D.GUEST,E.POZHARSKI, JRNL AUTH 2 M.LAW,R.A.MARIUZZA,E.A.TOTH,B.G.PIERCE,T.R.FUERST,G.OFEK JRNL TITL STRUCTURE OF ENGINEERED HEPATITIS C VIRUS E1E2 ECTODOMAIN IN JRNL TITL 2 COMPLEX WITH NEUTRALIZING ANTIBODIES. JRNL REF NAT COMMUN V. 14 3980 2023 JRNL REFN ESSN 2041-1723 JRNL PMID 37407593 JRNL DOI 10.1038/S41467-023-39659-Z REMARK 2 REMARK 2 RESOLUTION. 3.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : CRYOSPARC, CRYOSPARC, CRYOSPARC REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.650 REMARK 3 NUMBER OF PARTICLES : 143576 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING ONLY REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 8FSJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-JAN-23. REMARK 100 THE DEPOSITION ID IS D_1000271254. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : HCV E1E2 ECTODOMAIN IN COMPLEX REMARK 245 WITH AR4A, HEPC74, AND IGH520 REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 1.00 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.40 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS GLACIOS REMARK 245 DETECTOR TYPE : GATAN K3 (6K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 500.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2500.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 4700.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 200 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, H, L, A, B, C, D, F, G, I, REMARK 350 AND CHAINS: J, K, M, N REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER E 384 REMARK 465 THR E 385 REMARK 465 HIS E 386 REMARK 465 VAL E 387 REMARK 465 THR E 388 REMARK 465 GLY E 389 REMARK 465 GLY E 390 REMARK 465 THR E 391 REMARK 465 ALA E 392 REMARK 465 SER E 393 REMARK 465 HIS E 394 REMARK 465 THR E 395 REMARK 465 THR E 396 REMARK 465 ARG E 397 REMARK 465 HIS E 398 REMARK 465 PHE E 399 REMARK 465 ALA E 400 REMARK 465 SER E 401 REMARK 465 LEU E 402 REMARK 465 PHE E 403 REMARK 465 SER E 404 REMARK 465 SER E 405 REMARK 465 GLY E 406 REMARK 465 ALA E 407 REMARK 465 SER E 408 REMARK 465 GLN E 409 REMARK 465 ARG E 410 REMARK 465 VAL E 411 REMARK 465 GLN E 412 REMARK 465 LEU E 413 REMARK 465 ILE E 414 REMARK 465 ASN E 415 REMARK 465 THR E 416 REMARK 465 ASN E 417 REMARK 465 GLY E 418 REMARK 465 SER E 419 REMARK 465 TRP E 420 REMARK 465 ILE E 705 REMARK 465 GLY E 706 REMARK 465 SER E 707 REMARK 465 ALA E 708 REMARK 465 VAL E 709 REMARK 465 VAL E 710 REMARK 465 SER E 711 REMARK 465 PHE E 712 REMARK 465 ALA E 713 REMARK 465 ILE E 714 REMARK 465 PRO E 715 REMARK 465 GLY E 716 REMARK 465 GLY E 717 REMARK 465 LEU E 718 REMARK 465 VAL E 719 REMARK 465 ALA E 720 REMARK 465 GLN E 721 REMARK 465 LEU E 722 REMARK 465 GLU E 723 REMARK 465 ASN E 724 REMARK 465 GLU E 725 REMARK 465 VAL E 726 REMARK 465 ALA E 727 REMARK 465 SER E 728 REMARK 465 LEU E 729 REMARK 465 GLU E 730 REMARK 465 ASN E 731 REMARK 465 GLU E 732 REMARK 465 ASN E 733 REMARK 465 GLU E 734 REMARK 465 THR E 735 REMARK 465 LEU E 736 REMARK 465 LYS E 737 REMARK 465 LYS E 738 REMARK 465 LYS E 739 REMARK 465 ASN E 740 REMARK 465 LEU E 741 REMARK 465 HIS E 742 REMARK 465 LYS E 743 REMARK 465 LYS E 744 REMARK 465 ASP E 745 REMARK 465 LEU E 746 REMARK 465 ILE E 747 REMARK 465 ALA E 748 REMARK 465 TYR E 749 REMARK 465 LEU E 750 REMARK 465 GLU E 751 REMARK 465 LYS E 752 REMARK 465 GLU E 753 REMARK 465 ILE E 754 REMARK 465 ALA E 755 REMARK 465 ASN E 756 REMARK 465 LEU E 757 REMARK 465 ARG E 758 REMARK 465 LYS E 759 REMARK 465 LYS E 760 REMARK 465 ILE E 761 REMARK 465 GLU E 762 REMARK 465 HIS E 763 REMARK 465 HIS E 764 REMARK 465 HIS E 765 REMARK 465 HIS E 766 REMARK 465 HIS E 767 REMARK 465 HIS E 768 REMARK 465 SER H 128 REMARK 465 LYS H 129 REMARK 465 SER H 130 REMARK 465 THR H 131 REMARK 465 CYS H 216 REMARK 465 ASP H 217 REMARK 465 LYS H 218 REMARK 465 THR H 219 REMARK 465 ALA H 220 REMARK 465 GLY H 221 REMARK 465 TRP H 222 REMARK 465 SER H 223 REMARK 465 HIS H 224 REMARK 465 PRO H 225 REMARK 465 GLN H 226 REMARK 465 PHE H 227 REMARK 465 GLU H 228 REMARK 465 LYS H 229 REMARK 465 GLY H 230 REMARK 465 GLY H 231 REMARK 465 GLY H 232 REMARK 465 SER H 233 REMARK 465 GLY H 234 REMARK 465 GLY H 235 REMARK 465 GLY H 236 REMARK 465 SER H 237 REMARK 465 GLY H 238 REMARK 465 GLY H 239 REMARK 465 SER H 240 REMARK 465 SER H 241 REMARK 465 ALA H 242 REMARK 465 TRP H 243 REMARK 465 SER H 244 REMARK 465 HIS H 245 REMARK 465 PRO H 246 REMARK 465 GLN H 247 REMARK 465 PHE H 248 REMARK 465 GLU H 249 REMARK 465 LYS H 250 REMARK 465 CYS L 214 REMARK 465 VAL A 256 REMARK 465 ALA A 257 REMARK 465 ILE A 258 REMARK 465 ARG A 259 REMARK 465 ARG A 260 REMARK 465 HIS A 261 REMARK 465 VAL A 262 REMARK 465 ASP A 263 REMARK 465 LEU A 264 REMARK 465 LEU A 265 REMARK 465 VAL A 266 REMARK 465 GLY A 267 REMARK 465 ALA A 268 REMARK 465 ALA A 269 REMARK 465 ALA A 270 REMARK 465 PHE A 271 REMARK 465 CYS A 272 REMARK 465 SER A 273 REMARK 465 ALA A 274 REMARK 465 MET A 275 REMARK 465 TYR A 276 REMARK 465 VAL A 277 REMARK 465 GLY A 278 REMARK 465 ASP A 279 REMARK 465 LEU A 280 REMARK 465 CYS A 281 REMARK 465 GLY A 282 REMARK 465 SER A 283 REMARK 465 VAL A 284 REMARK 465 PHE A 285 REMARK 465 LEU A 286 REMARK 465 VAL A 287 REMARK 465 SER A 288 REMARK 465 GLN A 289 REMARK 465 LEU A 290 REMARK 465 PHE A 291 REMARK 465 THR A 292 REMARK 465 PHE A 293 REMARK 465 SER A 294 REMARK 465 VAL A 313 REMARK 465 SER A 314 REMARK 465 GLY A 315 REMARK 465 HIS A 316 REMARK 465 ARG A 317 REMARK 465 MET A 318 REMARK 465 ALA A 319 REMARK 465 TRP A 320 REMARK 465 ASP A 321 REMARK 465 MET A 322 REMARK 465 MET A 323 REMARK 465 MET A 324 REMARK 465 ASN A 325 REMARK 465 TRP A 326 REMARK 465 SER A 327 REMARK 465 PRO A 328 REMARK 465 THR A 329 REMARK 465 ALA A 330 REMARK 465 ALA A 331 REMARK 465 LEU A 332 REMARK 465 VAL A 333 REMARK 465 VAL A 334 REMARK 465 SER A 335 REMARK 465 GLN A 336 REMARK 465 LEU A 337 REMARK 465 LEU A 338 REMARK 465 ARG A 339 REMARK 465 ILE A 340 REMARK 465 PRO A 341 REMARK 465 GLN A 342 REMARK 465 ALA A 343 REMARK 465 VAL A 344 REMARK 465 VAL A 345 REMARK 465 ASP A 346 REMARK 465 MET A 347 REMARK 465 VAL A 348 REMARK 465 ALA A 349 REMARK 465 PRO A 350 REMARK 465 GLY A 351 REMARK 465 GLY A 352 REMARK 465 ARG A 353 REMARK 465 ASN A 354 REMARK 465 ALA A 355 REMARK 465 TYR A 356 REMARK 465 LEU A 357 REMARK 465 ARG A 358 REMARK 465 LYS A 359 REMARK 465 LYS A 360 REMARK 465 ILE A 361 REMARK 465 ALA A 362 REMARK 465 ARG A 363 REMARK 465 LEU A 364 REMARK 465 LYS A 365 REMARK 465 LYS A 366 REMARK 465 ASP A 367 REMARK 465 ASN A 368 REMARK 465 LEU A 369 REMARK 465 GLN A 370 REMARK 465 LEU A 371 REMARK 465 GLU A 372 REMARK 465 ARG A 373 REMARK 465 ASP A 374 REMARK 465 GLU A 375 REMARK 465 GLN A 376 REMARK 465 ASN A 377 REMARK 465 LEU A 378 REMARK 465 GLU A 379 REMARK 465 LYS A 380 REMARK 465 ILE A 381 REMARK 465 ILE A 382 REMARK 465 ALA A 383 REMARK 465 ASN A 384 REMARK 465 LEU A 385 REMARK 465 ARG A 386 REMARK 465 ASP A 387 REMARK 465 GLU A 388 REMARK 465 ILE A 389 REMARK 465 ALA A 390 REMARK 465 ARG A 391 REMARK 465 LEU A 392 REMARK 465 GLU A 393 REMARK 465 ASN A 394 REMARK 465 GLU A 395 REMARK 465 VAL A 396 REMARK 465 ALA A 397 REMARK 465 MET B -21 REMARK 465 GLY B -20 REMARK 465 VAL B -19 REMARK 465 PRO B -18 REMARK 465 THR B -17 REMARK 465 GLN B -16 REMARK 465 VAL B -15 REMARK 465 LEU B -14 REMARK 465 GLY B -13 REMARK 465 LEU B -12 REMARK 465 LEU B -11 REMARK 465 LEU B -10 REMARK 465 LEU B -9 REMARK 465 TRP B -8 REMARK 465 LEU B -7 REMARK 465 THR B -6 REMARK 465 ASP B -5 REMARK 465 ALA B -4 REMARK 465 ARG B -3 REMARK 465 CYS B -2 REMARK 465 GLU B -1 REMARK 465 ILE B 0 REMARK 465 GLU B 1 REMARK 465 GLU B 212 REMARK 465 CYS B 213 REMARK 465 MET C -19 REMARK 465 TYR C -18 REMARK 465 ARG C -17 REMARK 465 MET C -16 REMARK 465 GLN C -15 REMARK 465 LEU C -14 REMARK 465 LEU C -13 REMARK 465 SER C -12 REMARK 465 CYS C -11 REMARK 465 ILE C -10 REMARK 465 ALA C -9 REMARK 465 LEU C -8 REMARK 465 SER C -7 REMARK 465 LEU C -6 REMARK 465 ALA C -5 REMARK 465 LEU C -4 REMARK 465 VAL C -3 REMARK 465 THR C -2 REMARK 465 ASN C -1 REMARK 465 SER C 0 REMARK 465 GLU C 1 REMARK 465 VAL C 2 REMARK 465 LYS C 214 REMARK 465 SER C 215 REMARK 465 CYS C 216 REMARK 465 ALA C 217 REMARK 465 GLY C 218 REMARK 465 TRP C 219 REMARK 465 SER C 220 REMARK 465 HIS C 221 REMARK 465 PRO C 222 REMARK 465 GLN C 223 REMARK 465 PHE C 224 REMARK 465 GLU C 225 REMARK 465 LYS C 226 REMARK 465 GLY C 227 REMARK 465 GLY C 228 REMARK 465 GLY C 229 REMARK 465 SER C 230 REMARK 465 GLY C 231 REMARK 465 GLY C 232 REMARK 465 GLY C 233 REMARK 465 SER C 234 REMARK 465 GLY C 235 REMARK 465 GLY C 236 REMARK 465 SER C 237 REMARK 465 SER C 238 REMARK 465 ALA C 239 REMARK 465 TRP C 240 REMARK 465 SER C 241 REMARK 465 HIS C 242 REMARK 465 PRO C 243 REMARK 465 GLN C 244 REMARK 465 PHE C 245 REMARK 465 GLU C 246 REMARK 465 LYS C 247 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP H 95 CG OD1 OD2 REMARK 470 LEU H 97 CG CD1 CD2 REMARK 470 LYS H 98 CG CD CE NZ REMARK 470 TYR H 99 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ASN H 100D CG OD1 ND2 REMARK 470 HIS H 100F CG ND1 CD2 CE1 NE2 REMARK 470 MET L 4 CG SD CE REMARK 470 GLN L 89 CG CD OE1 NE2 REMARK 470 LYS L 149 CG CD CE NZ REMARK 470 LYS L 188 CG CD CE NZ REMARK 470 SER B 27A OG REMARK 470 VAL B 28 CG1 CG2 REMARK 470 ASN B 31 CG OD1 ND2 REMARK 470 ASP B 60 CG OD1 OD2 REMARK 470 PHE B 62 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ARG B 77 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 78 CG CD1 CD2 REMARK 470 GLU B 79 CG CD OE1 OE2 REMARK 470 GLU B 81 CG CD OE1 OE2 REMARK 470 GLN B 100 CG CD OE1 NE2 REMARK 470 ASN B 137 CG OD1 ND2 REMARK 470 ASN B 138 CG OD1 ND2 REMARK 470 ARG B 141 CG CD NE CZ NH1 NH2 REMARK 470 ASN B 151 CG OD1 ND2 REMARK 470 LYS B 182 CG CD CE NZ REMARK 470 LYS B 189 CG CD CE NZ REMARK 470 LEU C 5 CG CD1 CD2 REMARK 470 MET C 24 CG SD CE REMARK 470 TYR C 79 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 TRP C 154 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP C 154 CZ3 CH2 REMARK 470 ASN C 155 CG OD1 ND2 REMARK 470 SER C 156 OG REMARK 470 LEU C 159 CG CD1 CD2 REMARK 470 HIS C 164 CG ND1 CD2 CE1 NE2 REMARK 470 HIS C 200 CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ALA A 251 OG1 THR A 255 1.97 REMARK 500 OD1 ASP A 233 OG SER A 235 2.02 REMARK 500 O TYR B 185 OH TYR B 191 2.04 REMARK 500 NH2 ARG L 61 O SER L 77 2.06 REMARK 500 OD1 ASP E 463 NH2 ARG E 587 2.11 REMARK 500 OG1 THR E 583 O TRP E 602 2.12 REMARK 500 NH2 ARG L 61 OD2 ASP L 82 2.12 REMARK 500 OD1 ASP L 170 OG1 THR L 172 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU E 427 24.50 -140.52 REMARK 500 MET E 456 35.70 -99.04 REMARK 500 PRO E 491 -177.83 -68.76 REMARK 500 ASP E 520 -168.63 -79.75 REMARK 500 PRO E 568 -176.05 -66.75 REMARK 500 LYS E 588 -11.75 72.85 REMARK 500 HIS E 589 90.86 -165.63 REMARK 500 PRO E 605 7.19 -69.20 REMARK 500 ASP E 698 36.91 -97.75 REMARK 500 SER H 7 -169.94 -79.65 REMARK 500 ILE H 30 -61.58 -93.94 REMARK 500 PHE H 146 146.42 -172.07 REMARK 500 ALA L 13 -175.63 -170.95 REMARK 500 SER L 30 -71.91 -57.09 REMARK 500 ALA L 51 -10.21 77.71 REMARK 500 SER L 65 -179.40 -172.66 REMARK 500 ALA L 84 -166.90 -161.71 REMARK 500 ASN L 92 -169.34 -162.10 REMARK 500 LYS L 169 -61.40 -94.90 REMARK 500 VAL A 213 -54.93 -122.74 REMARK 500 THR A 216 -169.91 -128.78 REMARK 500 ASP A 233 47.89 36.99 REMARK 500 TYR A 309 53.79 -147.79 REMARK 500 ALA B 51 -4.53 75.98 REMARK 500 SER B 95 142.26 -171.34 REMARK 500 ARG B 141 -176.39 -65.80 REMARK 500 GLU B 142 63.62 60.68 REMARK 500 ASN C 52G -137.42 38.49 REMARK 500 ASP C 54 -167.66 -78.08 REMARK 500 SER C 55 156.40 -49.41 REMARK 500 ASP C 101 -130.43 65.18 REMARK 500 GLN C 105 -124.46 36.17 REMARK 500 PHE C 146 148.11 -173.56 REMARK 500 SER C 156 -133.69 54.93 REMARK 500 ASN C 204 -5.20 72.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-29419 RELATED DB: EMDB REMARK 900 CRYO-EM STRUCTURE OF ENGINEERED HEPATITIS C VIRUS E1E2 ECTODOMAIN REMARK 900 IN COMPLEX WITH ANTIBODIES AR4A, HEPC74, AND IGH520 DBREF1 8FSJ E 384 714 UNP A0A2P0NE15_9HEPC DBREF2 8FSJ E A0A2P0NE15 214 544 DBREF 8FSJ E 715 768 PDB 8FSJ 8FSJ 715 768 DBREF 8FSJ H 1 250 PDB 8FSJ 8FSJ 1 250 DBREF 8FSJ L 1 214 PDB 8FSJ 8FSJ 1 214 DBREF1 8FSJ A 192 349 UNP A0A2P0NE34_9HEPC DBREF2 8FSJ A A0A2P0NE34 22 179 DBREF 8FSJ A 350 397 PDB 8FSJ 8FSJ 350 397 DBREF 8FSJ B -21 213 PDB 8FSJ 8FSJ -21 213 DBREF 8FSJ C -19 247 PDB 8FSJ 8FSJ -19 247 SEQRES 1 E 385 SER THR HIS VAL THR GLY GLY THR ALA SER HIS THR THR SEQRES 2 E 385 ARG HIS PHE ALA SER LEU PHE SER SER GLY ALA SER GLN SEQRES 3 E 385 ARG VAL GLN LEU ILE ASN THR ASN GLY SER TRP HIS ILE SEQRES 4 E 385 ASN ARG THR ALA LEU ASN CYS ASN ASP SER LEU HIS THR SEQRES 5 E 385 GLY PHE LEU ALA ALA LEU PHE TYR THR HIS LYS PHE ASN SEQRES 6 E 385 ALA SER GLY CYS PRO GLU ARG MET ALA HIS CYS ARG PRO SEQRES 7 E 385 ILE ASP GLU PHE ALA GLN GLY TRP GLY PRO ILE THR TYR SEQRES 8 E 385 ALA GLU GLY HIS GLY SER ASP GLN ARG PRO TYR CYS TRP SEQRES 9 E 385 HIS TYR ALA PRO ARG GLN CYS GLY THR ILE PRO ALA SER SEQRES 10 E 385 GLN VAL CYS GLY PRO VAL TYR CYS PHE THR PRO SER PRO SEQRES 11 E 385 VAL VAL VAL GLY THR THR ASP ARG PHE GLY ALA PRO THR SEQRES 12 E 385 TYR THR TRP GLY GLU ASN GLU THR ASP VAL LEU ILE LEU SEQRES 13 E 385 ASN ASN THR ARG PRO PRO GLN GLY ASN TRP PHE GLY CYS SEQRES 14 E 385 THR TRP MET ASN SER THR GLY PHE THR LYS THR CYS GLY SEQRES 15 E 385 GLY PRO PRO CYS ASN ILE GLY GLY VAL GLY ASN ASN THR SEQRES 16 E 385 LEU THR CYS PRO THR ASP CYS PHE ARG LYS HIS PRO GLU SEQRES 17 E 385 ALA THR TYR THR LYS CYS GLY SER GLY PRO TRP LEU THR SEQRES 18 E 385 PRO ARG CYS LEU VAL ASP TYR PRO TYR ARG LEU TRP HIS SEQRES 19 E 385 TYR PRO CYS THR VAL ASN PHE THR ILE PHE LYS VAL ARG SEQRES 20 E 385 MET TYR VAL GLY GLY VAL GLU HIS ARG LEU ASN ALA ALA SEQRES 21 E 385 CYS ASN TRP THR ARG GLY GLU ARG CYS ASP LEU GLN ASP SEQRES 22 E 385 ARG ASP ARG SER GLU LEU SER PRO LEU LEU LEU SER THR SEQRES 23 E 385 THR GLU TRP GLN ILE LEU PRO CYS SER PHE THR THR LEU SEQRES 24 E 385 PRO ALA LEU SER THR GLY LEU ILE HIS LEU HIS GLN ASN SEQRES 25 E 385 ILE VAL ASP VAL GLN TYR LEU TYR GLY ILE GLY SER ALA SEQRES 26 E 385 VAL VAL SER PHE ALA ILE PRO GLY GLY LEU VAL ALA GLN SEQRES 27 E 385 LEU GLU ASN GLU VAL ALA SER LEU GLU ASN GLU ASN GLU SEQRES 28 E 385 THR LEU LYS LYS LYS ASN LEU HIS LYS LYS ASP LEU ILE SEQRES 29 E 385 ALA TYR LEU GLU LYS GLU ILE ALA ASN LEU ARG LYS LYS SEQRES 30 E 385 ILE GLU HIS HIS HIS HIS HIS HIS SEQRES 1 H 264 GLN VAL GLN LEU VAL GLN SER GLY ALA GLU VAL LYS LYS SEQRES 2 H 264 PRO GLY SER SER VAL LYS VAL SER CYS THR THR SER GLY SEQRES 3 H 264 GLY THR TYR ILE ASN TYR ALA ILE SER TRP VAL ARG GLN SEQRES 4 H 264 ALA PRO GLY GLN GLY LEU GLU TRP VAL GLY GLY MET SER SEQRES 5 H 264 PRO ILE SER ASN THR PRO LYS TYR ALA GLN LYS PHE GLN SEQRES 6 H 264 GLY ARG VAL THR ILE THR ALA ASP GLU SER THR SER THR SEQRES 7 H 264 THR TYR MET GLU LEU SER SER LEU ARG PRO GLU ASP THR SEQRES 8 H 264 ALA VAL TYR TYR CYS ALA ARG ASP LEU LEU LYS TYR CYS SEQRES 9 H 264 GLY GLY GLY ASN CYS HIS SER LEU LEU VAL ASP PRO TRP SEQRES 10 H 264 GLY GLN GLY THR LEU VAL THR VAL SER SER ALA SER THR SEQRES 11 H 264 LYS GLY PRO SER VAL PHE PRO LEU ALA PRO SER SER LYS SEQRES 12 H 264 SER THR SER GLY GLY THR ALA ALA LEU GLY CYS LEU VAL SEQRES 13 H 264 LYS ASP TYR PHE PRO GLU PRO VAL THR VAL SER TRP ASN SEQRES 14 H 264 SER GLY ALA LEU THR SER GLY VAL HIS THR PHE PRO ALA SEQRES 15 H 264 VAL LEU GLN SER SER GLY LEU TYR SER LEU SER SER VAL SEQRES 16 H 264 VAL THR VAL PRO SER SER SER LEU GLY THR GLN THR TYR SEQRES 17 H 264 ILE CYS ASN VAL ASN HIS LYS PRO SER ASN THR LYS VAL SEQRES 18 H 264 ASP LYS ARG VAL GLU PRO LYS SER CYS ASP LYS THR ALA SEQRES 19 H 264 GLY TRP SER HIS PRO GLN PHE GLU LYS GLY GLY GLY SER SEQRES 20 H 264 GLY GLY GLY SER GLY GLY SER SER ALA TRP SER HIS PRO SEQRES 21 H 264 GLN PHE GLU LYS SEQRES 1 L 214 ASP ILE VAL MET THR GLN SER PRO SER THR LEU SER ALA SEQRES 2 L 214 SER VAL GLY ASP ARG VAL THR ILE SER CYS ARG ALA SER SEQRES 3 L 214 GLN SER ILE SER SER TRP LEU ALA TRP TYR GLN GLN LYS SEQRES 4 L 214 PRO GLY ARG ALA PRO LYS LEU LEU ILE TYR LYS ALA SER SEQRES 5 L 214 SER LEU GLU THR GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 L 214 GLY SER GLY THR GLU PHE THR LEU THR ILE SER SER LEU SEQRES 7 L 214 GLN PRO ASP ASP PHE ALA THR TYR TYR CYS GLN HIS TYR SEQRES 8 L 214 ASN THR TYR LEU PHE THR PHE GLY PRO GLY THR LYS VAL SEQRES 9 L 214 ASP LEU LYS ARG THR VAL ALA ALA PRO SER VAL PHE ILE SEQRES 10 L 214 PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR ALA SEQRES 11 L 214 SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG GLU SEQRES 12 L 214 ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SER SEQRES 13 L 214 GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER LYS SEQRES 14 L 214 ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SER SEQRES 15 L 214 LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS GLU SEQRES 16 L 214 VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SER SEQRES 17 L 214 PHE ASN ARG GLY GLU CYS SEQRES 1 A 206 TYR GLU VAL ARG ASN ALA SER GLY LEU TYR HIS VAL THR SEQRES 2 A 206 ASN ASP CYS SER ASN ALA SER ILE VAL TYR GLU THR THR SEQRES 3 A 206 ASP MET ILE MET HIS THR PRO GLY CYS VAL PRO CYS VAL SEQRES 4 A 206 ARG GLU ASP ASN SER SER ARG CYS TRP VAL ALA LEU THR SEQRES 5 A 206 PRO THR LEU ALA ALA ARG ASN ALA SER VAL PRO THR VAL SEQRES 6 A 206 ALA ILE ARG ARG HIS VAL ASP LEU LEU VAL GLY ALA ALA SEQRES 7 A 206 ALA PHE CYS SER ALA MET TYR VAL GLY ASP LEU CYS GLY SEQRES 8 A 206 SER VAL PHE LEU VAL SER GLN LEU PHE THR PHE SER PRO SEQRES 9 A 206 ARG ARG HIS GLU THR VAL GLN ASP CYS ASN CYS SER ILE SEQRES 10 A 206 TYR PRO GLY HIS VAL SER GLY HIS ARG MET ALA TRP ASP SEQRES 11 A 206 MET MET MET ASN TRP SER PRO THR ALA ALA LEU VAL VAL SEQRES 12 A 206 SER GLN LEU LEU ARG ILE PRO GLN ALA VAL VAL ASP MET SEQRES 13 A 206 VAL ALA PRO GLY GLY ARG ASN ALA TYR LEU ARG LYS LYS SEQRES 14 A 206 ILE ALA ARG LEU LYS LYS ASP ASN LEU GLN LEU GLU ARG SEQRES 15 A 206 ASP GLU GLN ASN LEU GLU LYS ILE ILE ALA ASN LEU ARG SEQRES 16 A 206 ASP GLU ILE ALA ARG LEU GLU ASN GLU VAL ALA SEQRES 1 B 236 MET GLY VAL PRO THR GLN VAL LEU GLY LEU LEU LEU LEU SEQRES 2 B 236 TRP LEU THR ASP ALA ARG CYS GLU ILE GLU LEU THR LEU SEQRES 3 B 236 THR GLN SER PRO GLY THR LEU SER LEU SER PRO GLY GLU SEQRES 4 B 236 ARG ALA THR LEU SER CYS ARG ALA SER GLN SER VAL SER SEQRES 5 B 236 ASN ASN TYR LEU ALA TRP TYR GLN GLN LYS PRO GLY GLN SEQRES 6 B 236 ALA PRO ARG LEU LEU ILE TYR GLY ALA SER SER ARG ALA SEQRES 7 B 236 THR GLY ILE PRO ASP ARG PHE SER GLY SER GLY SER GLY SEQRES 8 B 236 THR GLY PHE THR LEU ILE ILE SER ARG LEU GLU PRO GLU SEQRES 9 B 236 ASP PHE ALA VAL TYR TYR CYS GLN GLN TYR GLY SER SER SEQRES 10 B 236 SER ILE THR PHE GLY GLN GLY THR ARG LEU GLU ILE LYS SEQRES 11 B 236 ARG THR VAL ALA ALA PRO SER VAL PHE ILE PHE PRO PRO SEQRES 12 B 236 SER ASP GLU GLN LEU LYS SER GLY THR ALA SER VAL VAL SEQRES 13 B 236 CYS LEU LEU ASN ASN PHE TYR ARG GLU ALA LYS VAL GLN SEQRES 14 B 236 TRP LYS VAL ASP ASN ALA LEU GLN SER GLY ASN SER GLN SEQRES 15 B 236 GLU SER VAL THR GLU GLN ASP SER LYS ASP SER THR TYR SEQRES 16 B 236 SER LEU SER SER THR LEU THR LEU SER LYS ALA ASP TYR SEQRES 17 B 236 GLU LYS HIS LYS VAL TYR ALA CYS GLU VAL THR HIS GLN SEQRES 18 B 236 GLY LEU SER SER PRO VAL THR LYS SER PHE ASN ARG GLY SEQRES 19 B 236 GLU CYS SEQRES 1 C 298 MET TYR ARG MET GLN LEU LEU SER CYS ILE ALA LEU SER SEQRES 2 C 298 LEU ALA LEU VAL THR ASN SER GLU VAL GLN LEU LEU GLU SEQRES 3 C 298 GLN SER GLY PRO GLU VAL LYS LYS PRO GLY ASP SER LEU SEQRES 4 C 298 ARG ILE SER CYS LYS MET SER GLY ASP SER LEU VAL THR SEQRES 5 C 298 THR TRP ILE GLY TRP VAL ARG GLN LYS PRO GLY GLN GLY SEQRES 6 C 298 LEU GLU TRP MET GLY ILE ILE ASN PRO GLY ASP SER SER SEQRES 7 C 298 THR ASN ILE TYR PRO GLY ASP SER ALA THR ARG TYR GLY SEQRES 8 C 298 PRO SER PHE GLN GLY GLN VAL THR ILE SER ILE ASP LYS SEQRES 9 C 298 SER THR SER THR ALA TYR LEU GLN TRP ASN ASN VAL LYS SEQRES 10 C 298 ALA SER ASP THR GLY ILE TYR TYR CYS ALA ARG HIS VAL SEQRES 11 C 298 PRO VAL PRO ILE SER GLY THR PHE LEU TRP ARG GLU ARG SEQRES 12 C 298 GLU MET HIS ASP PHE GLY TYR PHE ASP ASP TRP GLY GLN SEQRES 13 C 298 GLY THR LEU VAL ILE VAL SER SER ALA SER THR LYS GLY SEQRES 14 C 298 PRO SER VAL PHE PRO LEU ALA PRO SER SER LYS SER THR SEQRES 15 C 298 SER GLY GLY THR ALA ALA LEU GLY CYS LEU VAL LYS ASP SEQRES 16 C 298 TYR PHE PRO GLU PRO VAL THR VAL SER TRP ASN SER GLY SEQRES 17 C 298 ALA LEU THR SER GLY VAL HIS THR PHE PRO ALA VAL LEU SEQRES 18 C 298 GLN SER SER GLY LEU TYR SER LEU SER SER VAL VAL THR SEQRES 19 C 298 VAL PRO SER SER SER LEU GLY THR GLN THR TYR ILE CYS SEQRES 20 C 298 ASN VAL ASN HIS LYS PRO SER ASN THR LYS VAL ASP LYS SEQRES 21 C 298 LYS VAL GLU PRO LYS SER CYS ALA GLY TRP SER HIS PRO SEQRES 22 C 298 GLN PHE GLU LYS GLY GLY GLY SER GLY GLY GLY SER GLY SEQRES 23 C 298 GLY SER SER ALA TRP SER HIS PRO GLN PHE GLU LYS HET NAG D 1 14 HET NAG D 2 14 HET NAG F 1 14 HET NAG F 2 14 HET NAG G 1 14 HET NAG G 2 14 HET BMA G 3 11 HET NAG I 1 14 HET NAG I 2 14 HET BMA I 3 11 HET NAG J 1 14 HET NAG J 2 14 HET BMA J 3 11 HET NAG K 1 14 HET NAG K 2 14 HET BMA K 3 11 HET NAG M 1 14 HET NAG M 2 14 HET BMA M 3 11 HET NAG N 1 14 HET NAG N 2 14 HET BMA N 3 11 HET NAG E 801 14 HET NAG E 802 14 HET NAG E 803 14 HET NAG E 804 14 HET NAG A 401 14 HET NAG A 402 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 7 NAG 22(C8 H15 N O6) FORMUL 9 BMA 6(C6 H12 O6) HELIX 1 AA1 LEU E 438 TYR E 443 1 6 HELIX 2 AA2 ASN E 448 SER E 450 5 3 HELIX 3 AA3 GLY E 451 MET E 456 1 6 HELIX 4 AA4 THR E 593 GLY E 598 1 6 HELIX 5 AA5 TYR E 613 TYR E 618 1 6 HELIX 6 AA6 ARG H 83 THR H 87 5 5 HELIX 7 AA7 SER H 156 ALA H 158 5 3 HELIX 8 AA8 SER H 187 LEU H 189 5 3 HELIX 9 AA9 GLN L 79 PHE L 83 5 5 HELIX 10 AB1 SER L 121 SER L 127 1 7 HELIX 11 AB2 LYS L 183 LYS L 188 1 6 HELIX 12 AB3 SER A 208 ILE A 212 5 5 HELIX 13 AB4 VAL B 28 TYR B 32 5 5 HELIX 14 AB5 GLU B 79 PHE B 83 5 5 HELIX 15 AB6 SER B 121 SER B 127 1 7 HELIX 16 AB7 LYS B 182 HIS B 188 1 7 HELIX 17 AB8 SER C 127 THR C 131 5 5 HELIX 18 AB9 SER C 172 GLY C 174 5 3 HELIX 19 AC1 SER C 186 GLN C 192 1 7 SHEET 1 AA1 2 ILE E 497 PRO E 498 0 SHEET 2 AA1 2 VAL E 536 LEU E 537 -1 O LEU E 537 N ILE E 497 SHEET 1 AA2 3 CYS E 503 PHE E 509 0 SHEET 2 AA2 3 GLY E 551 MET E 555 -1 O MET E 555 N CYS E 503 SHEET 3 AA2 3 THR E 561 THR E 563 -1 O LYS E 562 N TRP E 554 SHEET 1 AA3 3 CYS E 607 LEU E 608 0 SHEET 2 AA3 3 ALA E 643 CYS E 644 -1 O ALA E 643 N LEU E 608 SHEET 3 AA3 3 THR E 625 ILE E 626 -1 N THR E 625 O CYS E 644 SHEET 1 AA4 2 VAL E 629 ARG E 630 0 SHEET 2 AA4 2 ARG E 639 LEU E 640 -1 O LEU E 640 N VAL E 629 SHEET 1 AA5 2 ASP E 658 ARG E 659 0 SHEET 2 AA5 2 SER E 678 PHE E 679 1 O PHE E 679 N ASP E 658 SHEET 1 AA6 3 GLU E 671 GLN E 673 0 SHEET 2 AA6 3 VAL E 699 TYR E 701 -1 O GLN E 700 N TRP E 672 SHEET 3 AA6 3 HIS E 691 LEU E 692 -1 N HIS E 691 O TYR E 701 SHEET 1 AA7 4 GLN H 3 GLN H 6 0 SHEET 2 AA7 4 LYS H 19 SER H 25 -1 O SER H 25 N GLN H 3 SHEET 3 AA7 4 THR H 77 GLU H 81 -1 O MET H 80 N VAL H 20 SHEET 4 AA7 4 THR H 68 ASP H 72 -1 N THR H 70 O TYR H 79 SHEET 1 AA8 6 GLU H 10 LYS H 12 0 SHEET 2 AA8 6 THR H 107 VAL H 111 1 O LEU H 108 N GLU H 10 SHEET 3 AA8 6 ALA H 88 LEU H 97 -1 N TYR H 90 O THR H 107 SHEET 4 AA8 6 ILE H 34 GLN H 39 -1 N SER H 35 O ALA H 93 SHEET 5 AA8 6 GLU H 46 MET H 51 -1 O GLU H 46 N ARG H 38 SHEET 6 AA8 6 PRO H 57 TYR H 59 -1 O LYS H 58 N GLY H 50 SHEET 1 AA9 4 GLU H 10 LYS H 12 0 SHEET 2 AA9 4 THR H 107 VAL H 111 1 O LEU H 108 N GLU H 10 SHEET 3 AA9 4 ALA H 88 LEU H 97 -1 N TYR H 90 O THR H 107 SHEET 4 AA9 4 SER H 100G TRP H 103 -1 O LEU H 100H N LEU H 96 SHEET 1 AB1 4 SER H 120 LEU H 124 0 SHEET 2 AB1 4 THR H 135 TYR H 145 -1 O LEU H 141 N PHE H 122 SHEET 3 AB1 4 SER H 180 PRO H 185 -1 O VAL H 184 N ALA H 136 SHEET 4 AB1 4 VAL H 163 THR H 165 -1 N HIS H 164 O VAL H 181 SHEET 1 AB2 4 SER H 120 LEU H 124 0 SHEET 2 AB2 4 THR H 135 TYR H 145 -1 O LEU H 141 N PHE H 122 SHEET 3 AB2 4 TYR H 176 LEU H 178 -1 O TYR H 176 N TYR H 145 SHEET 4 AB2 4 VAL H 169 LEU H 170 -1 N VAL H 169 O SER H 177 SHEET 1 AB3 3 VAL H 150 TRP H 154 0 SHEET 2 AB3 3 ILE H 195 HIS H 200 -1 O ASN H 197 N SER H 153 SHEET 3 AB3 3 THR H 205 ARG H 210 -1 O VAL H 207 N VAL H 198 SHEET 1 AB4 3 MET L 4 SER L 7 0 SHEET 2 AB4 3 SER L 22 ILE L 29 -1 O ARG L 24 N THR L 5 SHEET 3 AB4 3 PHE L 62 ILE L 75 -1 O GLY L 68 N ILE L 29 SHEET 1 AB5 6 THR L 10 ALA L 13 0 SHEET 2 AB5 6 THR L 102 LEU L 106 1 O LYS L 103 N LEU L 11 SHEET 3 AB5 6 THR L 85 TYR L 91 -1 O TYR L 86 N THR L 102 SHEET 4 AB5 6 ALA L 34 GLN L 38 -1 N ALA L 34 O GLN L 89 SHEET 5 AB5 6 LYS L 45 TYR L 49 -1 O LYS L 45 N GLN L 37 SHEET 6 AB5 6 SER L 53 LEU L 54 -1 O SER L 53 N TYR L 49 SHEET 1 AB6 4 THR L 10 ALA L 13 0 SHEET 2 AB6 4 THR L 102 LEU L 106 1 O LYS L 103 N LEU L 11 SHEET 3 AB6 4 THR L 85 TYR L 91 -1 O TYR L 86 N THR L 102 SHEET 4 AB6 4 PHE L 96 PHE L 98 -1 O THR L 97 N HIS L 90 SHEET 1 AB7 4 PHE L 116 PHE L 118 0 SHEET 2 AB7 4 THR L 129 PHE L 139 -1 O LEU L 135 N PHE L 116 SHEET 3 AB7 4 TYR L 173 SER L 182 -1 O SER L 177 N CYS L 134 SHEET 4 AB7 4 SER L 159 VAL L 163 -1 N GLN L 160 O THR L 178 SHEET 1 AB8 4 ALA L 153 GLN L 155 0 SHEET 2 AB8 4 LYS L 145 VAL L 150 -1 N VAL L 150 O ALA L 153 SHEET 3 AB8 4 VAL L 191 THR L 197 -1 O ALA L 193 N LYS L 149 SHEET 4 AB8 4 VAL L 205 ASN L 210 -1 O PHE L 209 N TYR L 192 SHEET 1 AB9 2 GLU A 193 ALA A 197 0 SHEET 2 AB9 2 LEU A 200 THR A 204 -1 O THR A 204 N GLU A 193 SHEET 1 AC1 3 ILE A 220 MET A 221 0 SHEET 2 AC1 3 LEU A 246 ALA A 248 -1 O ALA A 247 N ILE A 220 SHEET 3 AC1 3 VAL A 240 ALA A 241 -1 N VAL A 240 O ALA A 248 SHEET 1 AC2 2 CYS A 229 GLU A 232 0 SHEET 2 AC2 2 SER A 235 CYS A 238 -1 O SER A 235 N GLU A 232 SHEET 1 AC3 4 THR B 5 SER B 7 0 SHEET 2 AC3 4 ALA B 19 ARG B 24 -1 O ARG B 24 N THR B 5 SHEET 3 AC3 4 GLY B 70 ILE B 75 -1 O LEU B 73 N LEU B 21 SHEET 4 AC3 4 PHE B 62 SER B 67 -1 N SER B 63 O ILE B 74 SHEET 1 AC4 6 THR B 10 LEU B 13 0 SHEET 2 AC4 6 THR B 102 ILE B 106 1 O ARG B 103 N LEU B 11 SHEET 3 AC4 6 VAL B 85 CYS B 88 -1 N TYR B 86 O THR B 102 SHEET 4 AC4 6 ALA B 34 GLN B 38 -1 N TYR B 36 O TYR B 87 SHEET 5 AC4 6 ARG B 45 TYR B 49 -1 O ARG B 45 N GLN B 37 SHEET 6 AC4 6 SER B 53 ARG B 54 -1 O SER B 53 N TYR B 49 SHEET 1 AC5 4 SER B 114 PHE B 118 0 SHEET 2 AC5 4 THR B 129 PHE B 139 -1 O VAL B 133 N PHE B 118 SHEET 3 AC5 4 TYR B 172 SER B 181 -1 O LEU B 180 N ALA B 130 SHEET 4 AC5 4 SER B 158 VAL B 162 -1 N GLN B 159 O THR B 177 SHEET 1 AC6 3 LYS B 144 VAL B 149 0 SHEET 2 AC6 3 VAL B 190 THR B 196 -1 O GLU B 194 N GLN B 146 SHEET 3 AC6 3 VAL B 204 ASN B 209 -1 O LYS B 206 N CYS B 193 SHEET 1 AC7 2 GLU C 6 GLN C 6A 0 SHEET 2 AC7 2 CYS C 22 LYS C 23 -1 O LYS C 23 N GLU C 6 SHEET 1 AC8 2 GLU C 10 LYS C 12 0 SHEET 2 AC8 2 VAL C 109 VAL C 111 1 O ILE C 110 N GLU C 10 SHEET 1 AC9 3 GLU C 46 ILE C 50 0 SHEET 2 AC9 3 GLY C 35 GLN C 39 -1 N ARG C 38 O GLU C 46 SHEET 3 AC9 3 ILE C 89 TYR C 90 -1 O ILE C 89 N GLN C 39 SHEET 1 AD1 2 SER C 70 ASP C 72 0 SHEET 2 AD1 2 THR C 77 TYR C 79 -1 O THR C 77 N ASP C 72 SHEET 1 AD2 4 SER C 120 LEU C 124 0 SHEET 2 AD2 4 THR C 135 TYR C 145 -1 O LEU C 141 N PHE C 122 SHEET 3 AD2 4 LEU C 175 PRO C 185 -1 O VAL C 184 N ALA C 136 SHEET 4 AD2 4 HIS C 164 THR C 165 -1 N HIS C 164 O VAL C 181 SHEET 1 AD3 4 SER C 120 LEU C 124 0 SHEET 2 AD3 4 THR C 135 TYR C 145 -1 O LEU C 141 N PHE C 122 SHEET 3 AD3 4 LEU C 175 PRO C 185 -1 O VAL C 184 N ALA C 136 SHEET 4 AD3 4 VAL C 169 GLN C 171 -1 N VAL C 169 O SER C 177 SHEET 1 AD4 3 THR C 151 SER C 153 0 SHEET 2 AD4 3 TYR C 194 HIS C 200 -1 O ASN C 197 N SER C 153 SHEET 3 AD4 3 THR C 205 VAL C 211 -1 O LYS C 209 N CYS C 196 SSBOND 1 CYS E 429 CYS E 503 1555 1555 2.05 SSBOND 2 CYS E 452 CYS E 620 1555 1555 2.03 SSBOND 3 CYS E 459 CYS E 486 1555 1555 2.03 SSBOND 4 CYS E 494 CYS E 564 1555 1555 2.04 SSBOND 5 CYS E 508 CYS E 552 1555 1555 2.03 SSBOND 6 CYS E 569 CYS E 597 1555 1555 2.03 SSBOND 7 CYS E 581 CYS E 585 1555 1555 2.03 SSBOND 8 CYS E 607 CYS E 644 1555 1555 2.04 SSBOND 9 CYS E 652 CYS E 677 1555 1555 2.04 SSBOND 10 CYS H 22 CYS H 92 1555 1555 2.04 SSBOND 11 CYS H 100 CYS H 100E 1555 1555 2.03 SSBOND 12 CYS H 140 CYS H 196 1555 1555 2.03 SSBOND 13 CYS L 23 CYS L 88 1555 1555 2.03 SSBOND 14 CYS L 134 CYS L 194 1555 1555 2.03 SSBOND 15 CYS A 207 CYS A 226 1555 1555 2.03 SSBOND 16 CYS A 229 CYS A 304 1555 1555 2.03 SSBOND 17 CYS A 238 CYS A 306 1555 1555 2.03 SSBOND 18 CYS B 23 CYS B 88 1555 1555 2.04 SSBOND 19 CYS B 134 CYS B 193 1555 1555 2.03 SSBOND 20 CYS C 22 CYS C 92 1555 1555 2.03 SSBOND 21 CYS C 140 CYS C 196 1555 1555 2.03 LINK ND2 ASN E 423 C1 NAG E 804 1555 1555 1.44 LINK ND2 ASN E 430 C1 NAG D 1 1555 1555 1.45 LINK ND2 ASN E 448 C1 NAG G 1 1555 1555 1.44 LINK ND2 ASN E 532 C1 NAG E 803 1555 1555 1.44 LINK ND2 ASN E 540 C1 NAG F 1 1555 1555 1.45 LINK ND2 ASN E 556 C1 NAG K 1 1555 1555 1.44 LINK ND2 ASN E 576 C1 NAG E 801 1555 1555 1.44 LINK ND2 ASN E 623 C1 NAG I 1 1555 1555 1.44 LINK ND2 ASN E 645 C1 NAG J 1 1555 1555 1.44 LINK ND2 ASN E 695 C1 NAG E 802 1555 1555 1.44 LINK ND2 ASN A 196 C1 NAG N 1 1555 1555 1.44 LINK ND2 ASN A 209 C1 NAG A 401 1555 1555 1.44 LINK ND2 ASN A 250 C1 NAG A 402 1555 1555 1.45 LINK ND2 ASN A 305 C1 NAG M 1 1555 1555 1.44 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.44 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.44 LINK O4 NAG G 1 C1 NAG G 2 1555 1555 1.44 LINK O4 NAG G 2 C1 BMA G 3 1555 1555 1.44 LINK O4 NAG I 1 C1 NAG I 2 1555 1555 1.44 LINK O4 NAG I 2 C1 BMA I 3 1555 1555 1.44 LINK O4 NAG J 1 C1 NAG J 2 1555 1555 1.44 LINK O4 NAG J 2 C1 BMA J 3 1555 1555 1.44 LINK O4 NAG K 1 C1 NAG K 2 1555 1555 1.44 LINK O4 NAG K 2 C1 BMA K 3 1555 1555 1.44 LINK O4 NAG M 1 C1 NAG M 2 1555 1555 1.44 LINK O4 NAG M 2 C1 BMA M 3 1555 1555 1.44 LINK O4 NAG N 1 C1 NAG N 2 1555 1555 1.44 LINK O4 NAG N 2 C1 BMA N 3 1555 1555 1.44 CISPEP 1 PRO E 544 PRO E 545 0 0.23 CISPEP 2 ASP H 101 PRO H 102 0 3.08 CISPEP 3 PHE H 146 PRO H 147 0 -7.09 CISPEP 4 GLU H 148 PRO H 149 0 -4.82 CISPEP 5 SER L 7 PRO L 8 0 -1.42 CISPEP 6 TYR L 140 PRO L 141 0 0.25 CISPEP 7 SER B 7 PRO B 8 0 -3.88 CISPEP 8 PHE C 146 PRO C 147 0 -8.06 CISPEP 9 GLU C 148 PRO C 149 0 -0.27 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000