HEADER GENE REGULATION 02-FEB-23 8G1P TITLE CO-CRYSTAL STRUCTURE OF COMPOUND 11 IN COMPLEX WITH THE BROMODOMAIN OF TITLE 2 HUMAN SMARCA2 AND PVHL:ELONGINC:ELONGINB COMPND MOL_ID: 1; COMPND 2 MOLECULE: ELONGIN-B; COMPND 3 CHAIN: A, D; COMPND 4 SYNONYM: ELOB,ELONGIN 18 KDA SUBUNIT,RNA POLYMERASE II TRANSCRIPTION COMPND 5 FACTOR SIII SUBUNIT B,SIII P18,TRANSCRIPTION ELONGATION FACTOR B COMPND 6 POLYPEPTIDE 2; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: ELONGIN-C; COMPND 10 CHAIN: B, E; COMPND 11 SYNONYM: ELOC,ELONGIN 15 KDA SUBUNIT,RNA POLYMERASE II TRANSCRIPTION COMPND 12 FACTOR SIII SUBUNIT C,SIII P15,TRANSCRIPTION ELONGATION FACTOR B COMPND 13 POLYPEPTIDE 1; COMPND 14 ENGINEERED: YES; COMPND 15 MOL_ID: 3; COMPND 16 MOLECULE: VON HIPPEL-LINDAU DISEASE TUMOR SUPPRESSOR; COMPND 17 CHAIN: C, F; COMPND 18 SYNONYM: PROTEIN G7,PVHL; COMPND 19 ENGINEERED: YES; COMPND 20 MOL_ID: 4; COMPND 21 MOLECULE: PROBABLE GLOBAL TRANSCRIPTION ACTIVATOR SNF2L2; COMPND 22 CHAIN: G, H; COMPND 23 SYNONYM: CDNA FLJ61143,HIGHLY SIMILAR TO PROBABLE GLOBAL COMPND 24 TRANSCRIPTION ACTIVATOR SNF2L2; COMPND 25 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ELOB, TCEB2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: ELOC, TCEB1; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 15 MOL_ID: 3; SOURCE 16 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 17 ORGANISM_COMMON: HUMAN; SOURCE 18 ORGANISM_TAXID: 9606; SOURCE 19 GENE: VHL; SOURCE 20 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 21 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 22 MOL_ID: 4; SOURCE 23 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 24 ORGANISM_COMMON: HUMAN; SOURCE 25 ORGANISM_TAXID: 9606; SOURCE 26 GENE: SMARCA2; SOURCE 27 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 28 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TERNARY COMPLEX, PROTACS, TRANSCRIPTION, GENE REGULATION EXPDTA X-RAY DIFFRACTION AUTHOR S.GHIMIRE RIJAL,R.P.WURZ,A.VAISH REVDAT 2 30-AUG-23 8G1P 1 REMARK REVDAT 1 26-JUL-23 8G1P 0 JRNL AUTH R.P.WURZ,H.RUI,K.DELLAMAGGIORE,S.GHIMIRE-RIJAL,K.CHOI, JRNL AUTH 2 K.SMITHER,A.AMEGADZIE,N.CHEN,X.LI,A.BANERJEE,Q.CHEN,D.MOHL, JRNL AUTH 3 A.VAISH JRNL TITL AFFINITY AND COOPERATIVITY MODULATE TERNARY COMPLEX JRNL TITL 2 FORMATION TO DRIVE TARGETED PROTEIN DEGRADATION. JRNL REF NAT COMMUN V. 14 4177 2023 JRNL REFN ESSN 2041-1723 JRNL PMID 37443112 JRNL DOI 10.1038/S41467-023-39904-5 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18.2_3874 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.81 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 30985 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.212 REMARK 3 R VALUE (WORKING SET) : 0.209 REMARK 3 FREE R VALUE : 0.270 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 1564 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.8100 - 6.0000 1.00 2843 153 0.1980 0.2279 REMARK 3 2 6.0000 - 4.7700 1.00 2716 142 0.1985 0.2561 REMARK 3 3 4.7600 - 4.1600 1.00 2696 149 0.1695 0.2292 REMARK 3 4 4.1600 - 3.7800 1.00 2656 141 0.1848 0.2640 REMARK 3 5 3.7800 - 3.5100 1.00 2663 136 0.2191 0.2854 REMARK 3 6 3.5100 - 3.3000 1.00 2671 141 0.2290 0.2792 REMARK 3 7 3.3000 - 3.1400 1.00 2638 145 0.2272 0.2613 REMARK 3 8 3.1400 - 3.0000 1.00 2655 138 0.2459 0.3452 REMARK 3 9 3.0000 - 2.8900 1.00 2626 138 0.2560 0.3164 REMARK 3 10 2.8900 - 2.7900 1.00 2643 135 0.2538 0.3737 REMARK 3 11 2.7900 - 2.7000 1.00 2614 146 0.2540 0.3206 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.340 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.640 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 7576 REMARK 3 ANGLE : 0.877 10274 REMARK 3 CHIRALITY : 0.052 1140 REMARK 3 PLANARITY : 0.005 1322 REMARK 3 DIHEDRAL : 17.667 1031 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8G1P COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-FEB-23. REMARK 100 THE DEPOSITION ID IS D_1000272014. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-MAR-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30985 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 47.810 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 13.30 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.83 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.64 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.35 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 3350, 0.2M SODIUM CHLORIDE, PH REMARK 280 7.5, VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 39.76150 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 59.82700 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 57.83600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 59.82700 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 39.76150 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 57.83600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E, F, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO A 105 REMARK 465 GLN A 106 REMARK 465 ASP A 107 REMARK 465 SER A 108 REMARK 465 GLY A 109 REMARK 465 SER A 110 REMARK 465 SER A 111 REMARK 465 ALA A 112 REMARK 465 ASN A 113 REMARK 465 GLU A 114 REMARK 465 GLN A 115 REMARK 465 ALA A 116 REMARK 465 VAL A 117 REMARK 465 GLN A 118 REMARK 465 MET B 1 REMARK 465 ASP B 2 REMARK 465 GLY B 3 REMARK 465 GLU B 4 REMARK 465 GLU B 5 REMARK 465 LYS B 6 REMARK 465 THR B 7 REMARK 465 TYR B 8 REMARK 465 GLY B 9 REMARK 465 GLY B 10 REMARK 465 CYS B 11 REMARK 465 GLU B 12 REMARK 465 GLY B 13 REMARK 465 PRO B 14 REMARK 465 ASP B 15 REMARK 465 ALA B 16 REMARK 465 PRO B 49 REMARK 465 GLY B 50 REMARK 465 GLN B 51 REMARK 465 PHE B 52 REMARK 465 ALA B 53 REMARK 465 GLU B 54 REMARK 465 GLY C 52 REMARK 465 SER C 53 REMARK 465 MET C 54 REMARK 465 GLU C 55 REMARK 465 ALA C 56 REMARK 465 GLY C 57 REMARK 465 ARG C 58 REMARK 465 PRO C 59 REMARK 465 ILE C 206 REMARK 465 ALA C 207 REMARK 465 HIS C 208 REMARK 465 GLN C 209 REMARK 465 ARG C 210 REMARK 465 MET C 211 REMARK 465 GLY C 212 REMARK 465 ASP C 213 REMARK 465 LYS D 104 REMARK 465 PRO D 105 REMARK 465 GLN D 106 REMARK 465 ASP D 107 REMARK 465 SER D 108 REMARK 465 GLY D 109 REMARK 465 SER D 110 REMARK 465 SER D 111 REMARK 465 ALA D 112 REMARK 465 ASN D 113 REMARK 465 GLU D 114 REMARK 465 GLN D 115 REMARK 465 ALA D 116 REMARK 465 VAL D 117 REMARK 465 GLN D 118 REMARK 465 MET E 1 REMARK 465 ASP E 2 REMARK 465 GLY E 3 REMARK 465 GLU E 4 REMARK 465 GLU E 5 REMARK 465 LYS E 6 REMARK 465 THR E 7 REMARK 465 TYR E 8 REMARK 465 GLY E 9 REMARK 465 GLY E 10 REMARK 465 CYS E 11 REMARK 465 GLU E 12 REMARK 465 GLY E 13 REMARK 465 PRO E 14 REMARK 465 ASP E 15 REMARK 465 ALA E 16 REMARK 465 GLY E 48 REMARK 465 PRO E 49 REMARK 465 GLY E 50 REMARK 465 GLN E 51 REMARK 465 PHE E 52 REMARK 465 ALA E 53 REMARK 465 GLU E 54 REMARK 465 ASN E 55 REMARK 465 GLU E 56 REMARK 465 THR E 57 REMARK 465 GLY F 52 REMARK 465 SER F 53 REMARK 465 MET F 54 REMARK 465 GLU F 55 REMARK 465 ALA F 56 REMARK 465 GLY F 57 REMARK 465 ARG F 58 REMARK 465 PRO F 59 REMARK 465 ARG F 60 REMARK 465 ARG F 205 REMARK 465 ILE F 206 REMARK 465 ALA F 207 REMARK 465 HIS F 208 REMARK 465 GLN F 209 REMARK 465 ARG F 210 REMARK 465 MET F 211 REMARK 465 GLY F 212 REMARK 465 ASP F 213 REMARK 465 SER G 1371 REMARK 465 MET G 1372 REMARK 465 GLU G 1491 REMARK 465 GLU G 1492 REMARK 465 GLU G 1493 REMARK 465 SER H 1371 REMARK 465 MET H 1372 REMARK 465 ALA H 1373 REMARK 465 GLU H 1374 REMARK 465 LYS H 1375 REMARK 465 LEU H 1376 REMARK 465 GLU H 1491 REMARK 465 GLU H 1492 REMARK 465 GLU H 1493 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 82 CG OD1 OD2 REMARK 470 LYS A 104 CG CD CE NZ REMARK 470 SER B 47 OG REMARK 470 ARG C 60 CG CD NE CZ NH1 NH2 REMARK 470 THR C 133 OG1 CG2 REMARK 470 LYS C 196 CG CD CE NZ REMARK 470 GLN C 203 CG CD OE1 NE2 REMARK 470 GLU C 204 CG CD OE1 OE2 REMARK 470 ARG C 205 CG CD NE CZ NH1 NH2 REMARK 470 SER E 47 OG REMARK 470 ASN E 58 CG OD1 ND2 REMARK 470 THR F 133 OG1 CG2 REMARK 470 GLU G1374 CG CD OE1 OE2 REMARK 470 LYS G1375 CG CD CE NZ REMARK 470 LYS G1382 CG CD CE NZ REMARK 470 LYS H1451 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 10 -101.75 49.64 REMARK 500 ASP A 48 -10.28 76.04 REMARK 500 ASP A 82 -101.46 54.97 REMARK 500 ARG C 79 45.13 -100.26 REMARK 500 GLN C 132 -3.99 68.60 REMARK 500 ASP C 143 -134.91 60.91 REMARK 500 HIS D 10 -117.17 51.40 REMARK 500 SER F 72 117.15 -163.34 REMARK 500 LEU G1424 -61.98 -95.56 REMARK 500 LEU G1465 162.60 68.02 REMARK 500 ALA G1489 56.61 -92.14 REMARK 500 LEU H1418 80.31 -156.84 REMARK 500 LEU H1465 163.66 70.56 REMARK 500 REMARK 500 REMARK: NULL DBREF 8G1P A 1 118 UNP Q15370 ELOB_HUMAN 1 118 DBREF 8G1P B 1 112 UNP Q15369 ELOC_HUMAN 1 112 DBREF 8G1P C 56 213 UNP P40337 VHL_HUMAN 56 213 DBREF 8G1P D 1 118 UNP Q15370 ELOB_HUMAN 1 118 DBREF 8G1P E 1 112 UNP Q15369 ELOC_HUMAN 1 112 DBREF 8G1P F 56 213 UNP P40337 VHL_HUMAN 56 213 DBREF 8G1P G 1373 1493 UNP B4DNT1 B4DNT1_HUMAN 77 197 DBREF 8G1P H 1373 1493 UNP B4DNT1 B4DNT1_HUMAN 77 197 SEQADV 8G1P GLY C 52 UNP P40337 EXPRESSION TAG SEQADV 8G1P SER C 53 UNP P40337 EXPRESSION TAG SEQADV 8G1P MET C 54 UNP P40337 EXPRESSION TAG SEQADV 8G1P GLU C 55 UNP P40337 EXPRESSION TAG SEQADV 8G1P GLY F 52 UNP P40337 EXPRESSION TAG SEQADV 8G1P SER F 53 UNP P40337 EXPRESSION TAG SEQADV 8G1P MET F 54 UNP P40337 EXPRESSION TAG SEQADV 8G1P GLU F 55 UNP P40337 EXPRESSION TAG SEQADV 8G1P SER G 1371 UNP B4DNT1 EXPRESSION TAG SEQADV 8G1P MET G 1372 UNP B4DNT1 EXPRESSION TAG SEQADV 8G1P SER H 1371 UNP B4DNT1 EXPRESSION TAG SEQADV 8G1P MET H 1372 UNP B4DNT1 EXPRESSION TAG SEQRES 1 A 118 MET ASP VAL PHE LEU MET ILE ARG ARG HIS LYS THR THR SEQRES 2 A 118 ILE PHE THR ASP ALA LYS GLU SER SER THR VAL PHE GLU SEQRES 3 A 118 LEU LYS ARG ILE VAL GLU GLY ILE LEU LYS ARG PRO PRO SEQRES 4 A 118 ASP GLU GLN ARG LEU TYR LYS ASP ASP GLN LEU LEU ASP SEQRES 5 A 118 ASP GLY LYS THR LEU GLY GLU CYS GLY PHE THR SER GLN SEQRES 6 A 118 THR ALA ARG PRO GLN ALA PRO ALA THR VAL GLY LEU ALA SEQRES 7 A 118 PHE ARG ALA ASP ASP THR PHE GLU ALA LEU CYS ILE GLU SEQRES 8 A 118 PRO PHE SER SER PRO PRO GLU LEU PRO ASP VAL MET LYS SEQRES 9 A 118 PRO GLN ASP SER GLY SER SER ALA ASN GLU GLN ALA VAL SEQRES 10 A 118 GLN SEQRES 1 B 112 MET ASP GLY GLU GLU LYS THR TYR GLY GLY CYS GLU GLY SEQRES 2 B 112 PRO ASP ALA MET TYR VAL LYS LEU ILE SER SER ASP GLY SEQRES 3 B 112 HIS GLU PHE ILE VAL LYS ARG GLU HIS ALA LEU THR SER SEQRES 4 B 112 GLY THR ILE LYS ALA MET LEU SER GLY PRO GLY GLN PHE SEQRES 5 B 112 ALA GLU ASN GLU THR ASN GLU VAL ASN PHE ARG GLU ILE SEQRES 6 B 112 PRO SER HIS VAL LEU SER LYS VAL CYS MET TYR PHE THR SEQRES 7 B 112 TYR LYS VAL ARG TYR THR ASN SER SER THR GLU ILE PRO SEQRES 8 B 112 GLU PHE PRO ILE ALA PRO GLU ILE ALA LEU GLU LEU LEU SEQRES 9 B 112 MET ALA ALA ASN PHE LEU ASP CYS SEQRES 1 C 162 GLY SER MET GLU ALA GLY ARG PRO ARG PRO VAL LEU ARG SEQRES 2 C 162 SER VAL ASN SER ARG GLU PRO SER GLN VAL ILE PHE CYS SEQRES 3 C 162 ASN ARG SER PRO ARG VAL VAL LEU PRO VAL TRP LEU ASN SEQRES 4 C 162 PHE ASP GLY GLU PRO GLN PRO TYR PRO THR LEU PRO PRO SEQRES 5 C 162 GLY THR GLY ARG ARG ILE HIS SER TYR ARG GLY HIS LEU SEQRES 6 C 162 TRP LEU PHE ARG ASP ALA GLY THR HIS ASP GLY LEU LEU SEQRES 7 C 162 VAL ASN GLN THR GLU LEU PHE VAL PRO SER LEU ASN VAL SEQRES 8 C 162 ASP GLY GLN PRO ILE PHE ALA ASN ILE THR LEU PRO VAL SEQRES 9 C 162 TYR THR LEU LYS GLU ARG CYS LEU GLN VAL VAL ARG SER SEQRES 10 C 162 LEU VAL LYS PRO GLU ASN TYR ARG ARG LEU ASP ILE VAL SEQRES 11 C 162 ARG SER LEU TYR GLU ASP LEU GLU ASP HIS PRO ASN VAL SEQRES 12 C 162 GLN LYS ASP LEU GLU ARG LEU THR GLN GLU ARG ILE ALA SEQRES 13 C 162 HIS GLN ARG MET GLY ASP SEQRES 1 D 118 MET ASP VAL PHE LEU MET ILE ARG ARG HIS LYS THR THR SEQRES 2 D 118 ILE PHE THR ASP ALA LYS GLU SER SER THR VAL PHE GLU SEQRES 3 D 118 LEU LYS ARG ILE VAL GLU GLY ILE LEU LYS ARG PRO PRO SEQRES 4 D 118 ASP GLU GLN ARG LEU TYR LYS ASP ASP GLN LEU LEU ASP SEQRES 5 D 118 ASP GLY LYS THR LEU GLY GLU CYS GLY PHE THR SER GLN SEQRES 6 D 118 THR ALA ARG PRO GLN ALA PRO ALA THR VAL GLY LEU ALA SEQRES 7 D 118 PHE ARG ALA ASP ASP THR PHE GLU ALA LEU CYS ILE GLU SEQRES 8 D 118 PRO PHE SER SER PRO PRO GLU LEU PRO ASP VAL MET LYS SEQRES 9 D 118 PRO GLN ASP SER GLY SER SER ALA ASN GLU GLN ALA VAL SEQRES 10 D 118 GLN SEQRES 1 E 112 MET ASP GLY GLU GLU LYS THR TYR GLY GLY CYS GLU GLY SEQRES 2 E 112 PRO ASP ALA MET TYR VAL LYS LEU ILE SER SER ASP GLY SEQRES 3 E 112 HIS GLU PHE ILE VAL LYS ARG GLU HIS ALA LEU THR SER SEQRES 4 E 112 GLY THR ILE LYS ALA MET LEU SER GLY PRO GLY GLN PHE SEQRES 5 E 112 ALA GLU ASN GLU THR ASN GLU VAL ASN PHE ARG GLU ILE SEQRES 6 E 112 PRO SER HIS VAL LEU SER LYS VAL CYS MET TYR PHE THR SEQRES 7 E 112 TYR LYS VAL ARG TYR THR ASN SER SER THR GLU ILE PRO SEQRES 8 E 112 GLU PHE PRO ILE ALA PRO GLU ILE ALA LEU GLU LEU LEU SEQRES 9 E 112 MET ALA ALA ASN PHE LEU ASP CYS SEQRES 1 F 162 GLY SER MET GLU ALA GLY ARG PRO ARG PRO VAL LEU ARG SEQRES 2 F 162 SER VAL ASN SER ARG GLU PRO SER GLN VAL ILE PHE CYS SEQRES 3 F 162 ASN ARG SER PRO ARG VAL VAL LEU PRO VAL TRP LEU ASN SEQRES 4 F 162 PHE ASP GLY GLU PRO GLN PRO TYR PRO THR LEU PRO PRO SEQRES 5 F 162 GLY THR GLY ARG ARG ILE HIS SER TYR ARG GLY HIS LEU SEQRES 6 F 162 TRP LEU PHE ARG ASP ALA GLY THR HIS ASP GLY LEU LEU SEQRES 7 F 162 VAL ASN GLN THR GLU LEU PHE VAL PRO SER LEU ASN VAL SEQRES 8 F 162 ASP GLY GLN PRO ILE PHE ALA ASN ILE THR LEU PRO VAL SEQRES 9 F 162 TYR THR LEU LYS GLU ARG CYS LEU GLN VAL VAL ARG SER SEQRES 10 F 162 LEU VAL LYS PRO GLU ASN TYR ARG ARG LEU ASP ILE VAL SEQRES 11 F 162 ARG SER LEU TYR GLU ASP LEU GLU ASP HIS PRO ASN VAL SEQRES 12 F 162 GLN LYS ASP LEU GLU ARG LEU THR GLN GLU ARG ILE ALA SEQRES 13 F 162 HIS GLN ARG MET GLY ASP SEQRES 1 G 123 SER MET ALA GLU LYS LEU SER PRO ASN PRO PRO LYS LEU SEQRES 2 G 123 THR LYS GLN MET ASN ALA ILE ILE ASP THR VAL ILE ASN SEQRES 3 G 123 TYR LYS ASP SER SER GLY ARG GLN LEU SER GLU VAL PHE SEQRES 4 G 123 ILE GLN LEU PRO SER ARG LYS GLU LEU PRO GLU TYR TYR SEQRES 5 G 123 GLU LEU ILE ARG LYS PRO VAL ASP PHE LYS LYS ILE LYS SEQRES 6 G 123 GLU ARG ILE ARG ASN HIS LYS TYR ARG SER LEU GLY ASP SEQRES 7 G 123 LEU GLU LYS ASP VAL MET LEU LEU CYS HIS ASN ALA GLN SEQRES 8 G 123 THR PHE ASN LEU GLU GLY SER GLN ILE TYR GLU ASP SER SEQRES 9 G 123 ILE VAL LEU GLN SER VAL PHE LYS SER ALA ARG GLN LYS SEQRES 10 G 123 ILE ALA LYS GLU GLU GLU SEQRES 1 H 123 SER MET ALA GLU LYS LEU SER PRO ASN PRO PRO LYS LEU SEQRES 2 H 123 THR LYS GLN MET ASN ALA ILE ILE ASP THR VAL ILE ASN SEQRES 3 H 123 TYR LYS ASP SER SER GLY ARG GLN LEU SER GLU VAL PHE SEQRES 4 H 123 ILE GLN LEU PRO SER ARG LYS GLU LEU PRO GLU TYR TYR SEQRES 5 H 123 GLU LEU ILE ARG LYS PRO VAL ASP PHE LYS LYS ILE LYS SEQRES 6 H 123 GLU ARG ILE ARG ASN HIS LYS TYR ARG SER LEU GLY ASP SEQRES 7 H 123 LEU GLU LYS ASP VAL MET LEU LEU CYS HIS ASN ALA GLN SEQRES 8 H 123 THR PHE ASN LEU GLU GLY SER GLN ILE TYR GLU ASP SER SEQRES 9 H 123 ILE VAL LEU GLN SER VAL PHE LYS SER ALA ARG GLN LYS SEQRES 10 H 123 ILE ALA LYS GLU GLU GLU HET GOL A 201 6 HET FWZ C 301 66 HET FWZ F 301 66 HET GOL H1501 6 HETNAM GOL GLYCEROL HETNAM FWZ (2~{S},4~{R})-~{N}-[[2-[2-[4-[[4-[3-AZANYL-6-(2- HETNAM 2 FWZ HYDROXYPHENYL)PYRIDAZIN-4-YL]PIPERAZIN-1- HETNAM 3 FWZ YL]METHYL]PHENYL]ETHOXY]-4-(4-METHYL-1,3-THIAZOL-5- HETNAM 4 FWZ YL)PHENYL]METHYL]-1-[(2~{S})-2-[(1- HETNAM 5 FWZ FLUORANYLCYCLOPROPYL)CARBONYLAMINO]-3,3-DIMETHYL- HETNAM 6 FWZ BUTANOYL]-4-OXIDANYL-PYRROLIDINE-2-CARBOXAMIDE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 9 GOL 2(C3 H8 O3) FORMUL 10 FWZ 2(C49 H58 F N9 O6 S) FORMUL 13 HOH *193(H2 O) HELIX 1 AA1 THR A 23 LYS A 36 1 14 HELIX 2 AA2 PRO A 38 ASP A 40 5 3 HELIX 3 AA3 ARG B 33 LEU B 37 1 5 HELIX 4 AA4 SER B 39 LEU B 46 1 8 HELIX 5 AA5 PRO B 66 THR B 84 1 19 HELIX 6 AA6 ALA B 96 GLU B 98 5 3 HELIX 7 AA7 ILE B 99 ASP B 111 1 13 HELIX 8 AA8 THR C 157 VAL C 170 1 14 HELIX 9 AA9 LYS C 171 LEU C 178 5 8 HELIX 10 AB1 VAL C 181 ASP C 190 1 10 HELIX 11 AB2 ASN C 193 ARG C 205 1 13 HELIX 12 AB3 THR D 23 LYS D 36 1 14 HELIX 13 AB4 PRO D 38 ASP D 40 5 3 HELIX 14 AB5 THR D 56 GLY D 61 1 6 HELIX 15 AB6 ARG E 33 LEU E 37 1 5 HELIX 16 AB7 SER E 39 LEU E 46 1 8 HELIX 17 AB8 PRO E 66 THR E 84 1 19 HELIX 18 AB9 ALA E 96 ASP E 111 1 16 HELIX 19 AC1 THR F 157 VAL F 170 1 14 HELIX 20 AC2 LYS F 171 LEU F 178 5 8 HELIX 21 AC3 ARG F 182 ASP F 190 1 9 HELIX 22 AC4 ASN F 193 GLU F 204 1 12 HELIX 23 AC5 PRO G 1380 TYR G 1397 1 18 HELIX 24 AC6 SER G 1406 ILE G 1410 5 5 HELIX 25 AC7 LEU G 1418 ILE G 1425 1 8 HELIX 26 AC8 ASP G 1430 ASN G 1440 1 11 HELIX 27 AC9 SER G 1445 LEU G 1465 1 21 HELIX 28 AD1 SER G 1468 LYS G 1487 1 20 HELIX 29 AD2 PRO H 1380 TYR H 1397 1 18 HELIX 30 AD3 LEU H 1418 GLU H 1423 1 6 HELIX 31 AD4 ASP H 1430 ASN H 1440 1 11 HELIX 32 AD5 SER H 1445 LEU H 1465 1 21 HELIX 33 AD6 SER H 1468 LYS H 1490 1 23 SHEET 1 AA1 4 GLN A 49 LEU A 50 0 SHEET 2 AA1 4 GLN A 42 LYS A 46 -1 N LYS A 46 O GLN A 49 SHEET 3 AA1 4 ALA A 73 ALA A 81 -1 O ALA A 78 N ARG A 43 SHEET 4 AA1 4 THR A 84 PHE A 85 -1 O THR A 84 N ALA A 81 SHEET 1 AA2 8 GLN A 49 LEU A 50 0 SHEET 2 AA2 8 GLN A 42 LYS A 46 -1 N LYS A 46 O GLN A 49 SHEET 3 AA2 8 ALA A 73 ALA A 81 -1 O ALA A 78 N ARG A 43 SHEET 4 AA2 8 ASP A 2 ARG A 9 1 N ARG A 8 O VAL A 75 SHEET 5 AA2 8 THR A 12 LYS A 19 -1 O THR A 12 N ARG A 9 SHEET 6 AA2 8 GLU B 28 LYS B 32 1 O ILE B 30 N PHE A 15 SHEET 7 AA2 8 TYR B 18 ILE B 22 -1 N VAL B 19 O VAL B 31 SHEET 8 AA2 8 GLU B 59 ASN B 61 1 O VAL B 60 N ILE B 22 SHEET 1 AA3 4 GLY C 106 TYR C 112 0 SHEET 2 AA3 4 PRO C 71 ASN C 78 -1 N VAL C 74 O ILE C 109 SHEET 3 AA3 4 ILE C 147 THR C 152 1 O ILE C 151 N CYS C 77 SHEET 4 AA3 4 LEU C 129 VAL C 130 -1 N LEU C 129 O THR C 152 SHEET 1 AA4 3 PRO C 95 PRO C 97 0 SHEET 2 AA4 3 VAL C 84 LEU C 89 -1 N TRP C 88 O GLN C 96 SHEET 3 AA4 3 TRP C 117 ASP C 121 -1 O LEU C 118 N VAL C 87 SHEET 1 AA5 4 GLN D 49 LEU D 50 0 SHEET 2 AA5 4 GLN D 42 LYS D 46 -1 N LYS D 46 O GLN D 49 SHEET 3 AA5 4 ALA D 73 ALA D 81 -1 O GLY D 76 N TYR D 45 SHEET 4 AA5 4 THR D 84 PHE D 85 -1 O THR D 84 N ALA D 81 SHEET 1 AA6 8 GLN D 49 LEU D 50 0 SHEET 2 AA6 8 GLN D 42 LYS D 46 -1 N LYS D 46 O GLN D 49 SHEET 3 AA6 8 ALA D 73 ALA D 81 -1 O GLY D 76 N TYR D 45 SHEET 4 AA6 8 ASP D 2 ARG D 9 1 N ARG D 8 O LEU D 77 SHEET 5 AA6 8 THR D 12 LYS D 19 -1 O ALA D 18 N VAL D 3 SHEET 6 AA6 8 GLU E 28 LYS E 32 1 O ILE E 30 N PHE D 15 SHEET 7 AA6 8 TYR E 18 ILE E 22 -1 N VAL E 19 O VAL E 31 SHEET 8 AA6 8 GLU E 59 ASN E 61 1 O VAL E 60 N ILE E 22 SHEET 1 AA7 4 GLY F 106 TYR F 112 0 SHEET 2 AA7 4 PRO F 71 ASN F 78 -1 N PHE F 76 O ARG F 107 SHEET 3 AA7 4 ILE F 147 THR F 152 1 O ILE F 151 N CYS F 77 SHEET 4 AA7 4 LEU F 129 VAL F 130 -1 N LEU F 129 O THR F 152 SHEET 1 AA8 3 PRO F 95 PRO F 97 0 SHEET 2 AA8 3 VAL F 84 LEU F 89 -1 N TRP F 88 O GLN F 96 SHEET 3 AA8 3 TRP F 117 ASP F 121 -1 O LEU F 118 N VAL F 87 CRYST1 79.523 115.672 119.654 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012575 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008645 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008357 0.00000