HEADER IMMUNE SYSTEM/DNA 03-FEB-23 8G23 TITLE STRUCTURE OF TERNARY COMPLEX OF CGAS WITH DSDNA AND BOUND PPPIPA COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYCLIC GMP-AMP SYNTHASE; COMPND 3 CHAIN: A, C; COMPND 4 FRAGMENT: CATALYTIC DOMAIN, RESIDUES 147-507; COMPND 5 SYNONYM: CGAMP SYNTHASE,CGAS,M-CGAS,2'3'-CGAMP SYNTHASE,MAB-21 COMPND 6 DOMAIN-CONTAINING PROTEIN 1; COMPND 7 EC: 2.7.7.86; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: PALINDROMIC DNA18; COMPND 11 CHAIN: E, F, I, J; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: CGAS, MB21D1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PET28; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: NHMT MCAT WT; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 13 ORGANISM_TAXID: 32630 KEYWDS TRANSFERASE-DNA COMPLEX, CGAS, INTERMEDIATE, IMMUNE SYSTEM, IMMUNE KEYWDS 2 SYSTEM-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR S.WU,J.SOHN REVDAT 2 29-MAY-24 8G23 1 JRNL REVDAT 1 22-MAY-24 8G23 0 JRNL AUTH S.WU,S.B.GABELLI,J.SOHN JRNL TITL THE STRUCTURAL BASIS FOR 2'-5'/3'-5'-CGAMP SYNTHESIS BY JRNL TITL 2 CGAS. JRNL REF NAT COMMUN V. 15 4012 2024 JRNL REFN ESSN 2041-1723 JRNL PMID 38740774 JRNL DOI 10.1038/S41467-024-48365-3 REMARK 2 REMARK 2 RESOLUTION. 2.71 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18.2_3874 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.71 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.68 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.990 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 3 NUMBER OF REFLECTIONS : 29671 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.194 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.248 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.730 REMARK 3 FREE R VALUE TEST SET COUNT : 1997 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.6800 - 6.5000 0.97 2121 153 0.1743 0.1974 REMARK 3 2 6.5000 - 5.1700 0.97 2021 146 0.1909 0.2628 REMARK 3 3 5.1700 - 4.5200 0.97 2008 145 0.1664 0.2326 REMARK 3 4 4.5200 - 4.1100 0.99 2026 146 0.1616 0.2146 REMARK 3 5 4.1100 - 3.8100 0.98 2001 145 0.1737 0.2464 REMARK 3 6 3.8100 - 3.5900 0.99 1996 144 0.1907 0.2469 REMARK 3 7 3.5900 - 3.4100 0.99 1998 142 0.2035 0.2471 REMARK 3 8 3.4100 - 3.2600 0.98 1977 144 0.1995 0.2688 REMARK 3 9 3.2600 - 3.1400 0.97 1958 141 0.2034 0.2681 REMARK 3 10 3.1300 - 3.0300 0.98 1979 143 0.2306 0.3097 REMARK 3 11 3.0300 - 2.9300 0.97 1940 140 0.2498 0.3494 REMARK 3 12 2.9300 - 2.8500 0.97 1939 140 0.2332 0.3326 REMARK 3 13 2.8500 - 2.7700 0.98 1949 141 0.2469 0.2867 REMARK 3 14 2.7700 - 2.7100 0.89 1761 127 0.2337 0.2954 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.328 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.628 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 56.04 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 63.64 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 7552 REMARK 3 ANGLE : 1.106 10478 REMARK 3 CHIRALITY : 0.055 1141 REMARK 3 PLANARITY : 0.011 1060 REMARK 3 DIHEDRAL : 24.431 1473 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 19.5902 9.1203 -20.6229 REMARK 3 T TENSOR REMARK 3 T11: 0.2367 T22: 0.2935 REMARK 3 T33: 0.1836 T12: 0.0058 REMARK 3 T13: 0.0130 T23: -0.0083 REMARK 3 L TENSOR REMARK 3 L11: 0.9370 L22: 1.5410 REMARK 3 L33: 0.4488 L12: 0.4930 REMARK 3 L13: -0.2088 L23: 0.0467 REMARK 3 S TENSOR REMARK 3 S11: -0.0326 S12: 0.1502 S13: -0.0031 REMARK 3 S21: -0.0447 S22: 0.0083 S23: -0.0131 REMARK 3 S31: 0.0178 S32: -0.0692 S33: 0.0001 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8G23 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-FEB-23. REMARK 100 THE DEPOSITION ID IS D_1000272086. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-AUG-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0-7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS-II REMARK 200 BEAMLINE : 17-ID-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : HORIZONTAL BOUNCE SI(111) DOUBLE REMARK 200 CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS 20210205 REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.7 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30386 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 29.680 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 5.400 REMARK 200 R MERGE (I) : 0.09600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.84 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 5.40 REMARK 200 R MERGE FOR SHELL (I) : 0.77900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP 11.7.03 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.66 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.54 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM ACETATE, 32% MPD, WITH REMARK 280 0.1 M BIS-TRIS PH 6.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 38.86000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 71.06800 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 49.44650 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 71.06800 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 38.86000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 49.44650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, E, F, I, J REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 144 REMARK 465 THR A 145 REMARK 465 GLY A 146 REMARK 465 PRO A 147 REMARK 465 ASP A 148 REMARK 465 PHE A 239 REMARK 465 LYS A 240 REMARK 465 ARG A 241 REMARK 465 ILE A 242 REMARK 465 PRO A 243 REMARK 465 ARG A 244 REMARK 465 LYS A 353 REMARK 465 ASP A 354 REMARK 465 GLY A 355 REMARK 465 ASN A 356 REMARK 465 SER A 357 REMARK 465 PHE A 358 REMARK 465 LEU A 507 REMARK 465 GLY C 144 REMARK 465 THR C 145 REMARK 465 GLY C 146 REMARK 465 PRO C 147 REMARK 465 ASP C 148 REMARK 465 LYS C 240 REMARK 465 ARG C 241 REMARK 465 ILE C 242 REMARK 465 PRO C 243 REMARK 465 ARG C 244 REMARK 465 GLY C 245 REMARK 465 GLU C 253 REMARK 465 GLY C 254 REMARK 465 GLU C 255 REMARK 465 LYS C 353 REMARK 465 ASP C 354 REMARK 465 GLY C 355 REMARK 465 ASN C 356 REMARK 465 SER C 357 REMARK 465 PHE C 358 REMARK 465 LEU C 507 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 176 NH2 ARG A 180 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 301 C - N - CD ANGL. DEV. = -15.3 DEGREES REMARK 500 DA E 7 O4' - C1' - N9 ANGL. DEV. = 2.5 DEGREES REMARK 500 DA E 15 O4' - C1' - N9 ANGL. DEV. = 2.0 DEGREES REMARK 500 DT E 18 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES REMARK 500 DC I 14 O4' - C1' - N1 ANGL. DEV. = 2.2 DEGREES REMARK 500 DT I 18 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES REMARK 500 DC J 14 O4' - C1' - N1 ANGL. DEV. = 3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 185 -145.37 20.26 REMARK 500 SER A 207 -64.89 69.32 REMARK 500 PRO A 221 -149.20 -70.15 REMARK 500 ARG A 222 -56.74 59.95 REMARK 500 ILE A 223 -104.66 62.54 REMARK 500 GLU A 224 80.49 54.35 REMARK 500 ASN A 246 121.49 -39.58 REMARK 500 GLU A 255 -29.75 76.21 REMARK 500 ASN A 300 49.13 -92.64 REMARK 500 PRO A 301 -59.97 39.17 REMARK 500 TRP A 331 -68.59 -122.80 REMARK 500 GLU A 463 73.26 25.00 REMARK 500 ASN A 499 20.62 -152.91 REMARK 500 GLN C 183 -73.94 -99.85 REMARK 500 LYS C 184 24.38 -71.57 REMARK 500 SER C 207 -56.49 72.80 REMARK 500 PRO C 221 91.63 -68.38 REMARK 500 ARG C 222 161.03 49.00 REMARK 500 ILE C 223 -52.48 -149.04 REMARK 500 GLU C 224 113.17 -34.26 REMARK 500 TYR C 229 -131.41 61.05 REMARK 500 LEU C 248 10.48 -68.85 REMARK 500 SER C 291 134.24 -31.63 REMARK 500 ARG C 299 73.24 -150.29 REMARK 500 PRO C 301 -73.48 12.95 REMARK 500 TRP C 331 -76.99 -126.46 REMARK 500 ASN C 351 -142.91 -105.71 REMARK 500 ASN C 377 59.42 -141.98 REMARK 500 ASP C 434 76.13 -111.08 REMARK 500 PHE C 501 75.16 57.47 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASN A 300 PRO A 301 -119.80 REMARK 500 ARG C 222 ILE C 223 -44.10 REMARK 500 ASN C 300 PRO C 301 -127.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 602 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 211 OE1 REMARK 620 2 ASP A 213 OD2 92.3 REMARK 620 3 ATP A 601 O3G 97.8 167.7 REMARK 620 4 ATP A 601 O2B 167.2 74.9 94.9 REMARK 620 5 ATP A 601 O2A 103.5 77.7 93.0 74.2 REMARK 620 6 HOH A 710 O 86.0 94.2 93.6 94.7 167.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 603 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 378 NE2 REMARK 620 2 CYS A 384 SG 102.8 REMARK 620 3 CYS A 385 SG 113.0 132.6 REMARK 620 4 CYS A 392 SG 95.5 93.0 112.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 602 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU C 211 OE1 REMARK 620 2 ASP C 213 OD1 96.0 REMARK 620 3 VWX C 601 O9 86.7 86.1 REMARK 620 4 VWX C 601 O12 168.4 91.8 85.1 REMARK 620 5 VWX C 601 O15 78.9 172.5 88.1 92.5 REMARK 620 6 HOH C 703 O 98.1 92.9 175.1 90.1 93.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 603 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 378 NE2 REMARK 620 2 CYS C 384 SG 105.2 REMARK 620 3 CYS C 385 SG 108.0 135.8 REMARK 620 4 CYS C 392 SG 97.7 94.5 108.8 REMARK 620 N 1 2 3 DBREF 8G23 A 147 507 UNP Q8C6L5 CGAS_MOUSE 147 507 DBREF 8G23 C 147 507 UNP Q8C6L5 CGAS_MOUSE 147 507 DBREF 8G23 E 1 18 PDB 8G23 8G23 1 18 DBREF 8G23 F 1 18 PDB 8G23 8G23 1 18 DBREF 8G23 I 1 18 PDB 8G23 8G23 1 18 DBREF 8G23 J 1 18 PDB 8G23 8G23 1 18 SEQADV 8G23 GLY A 144 UNP Q8C6L5 EXPRESSION TAG SEQADV 8G23 THR A 145 UNP Q8C6L5 EXPRESSION TAG SEQADV 8G23 GLY A 146 UNP Q8C6L5 EXPRESSION TAG SEQADV 8G23 GLY C 144 UNP Q8C6L5 EXPRESSION TAG SEQADV 8G23 THR C 145 UNP Q8C6L5 EXPRESSION TAG SEQADV 8G23 GLY C 146 UNP Q8C6L5 EXPRESSION TAG SEQRES 1 A 364 GLY THR GLY PRO ASP LYS LEU LYS LYS VAL LEU ASP LYS SEQRES 2 A 364 LEU ARG LEU LYS ARG LYS ASP ILE SER GLU ALA ALA GLU SEQRES 3 A 364 THR VAL ASN LYS VAL VAL GLU ARG LEU LEU ARG ARG MET SEQRES 4 A 364 GLN LYS ARG GLU SER GLU PHE LYS GLY VAL GLU GLN LEU SEQRES 5 A 364 ASN THR GLY SER TYR TYR GLU HIS VAL LYS ILE SER ALA SEQRES 6 A 364 PRO ASN GLU PHE ASP VAL MET PHE LYS LEU GLU VAL PRO SEQRES 7 A 364 ARG ILE GLU LEU GLN GLU TYR TYR GLU THR GLY ALA PHE SEQRES 8 A 364 TYR LEU VAL LYS PHE LYS ARG ILE PRO ARG GLY ASN PRO SEQRES 9 A 364 LEU SER HIS PHE LEU GLU GLY GLU VAL LEU SER ALA THR SEQRES 10 A 364 LYS MET LEU SER LYS PHE ARG LYS ILE ILE LYS GLU GLU SEQRES 11 A 364 VAL LYS GLU ILE LYS ASP ILE ASP VAL SER VAL GLU LYS SEQRES 12 A 364 GLU LYS PRO GLY SER PRO ALA VAL THR LEU LEU ILE ARG SEQRES 13 A 364 ASN PRO GLU GLU ILE SER VAL ASP ILE ILE LEU ALA LEU SEQRES 14 A 364 GLU SER LYS GLY SER TRP PRO ILE SER THR LYS GLU GLY SEQRES 15 A 364 LEU PRO ILE GLN GLY TRP LEU GLY THR LYS VAL ARG THR SEQRES 16 A 364 ASN LEU ARG ARG GLU PRO PHE TYR LEU VAL PRO LYS ASN SEQRES 17 A 364 ALA LYS ASP GLY ASN SER PHE GLN GLY GLU THR TRP ARG SEQRES 18 A 364 LEU SER PHE SER HIS THR GLU LYS TYR ILE LEU ASN ASN SEQRES 19 A 364 HIS GLY ILE GLU LYS THR CYS CYS GLU SER SER GLY ALA SEQRES 20 A 364 LYS CYS CYS ARG LYS GLU CYS LEU LYS LEU MET LYS TYR SEQRES 21 A 364 LEU LEU GLU GLN LEU LYS LYS GLU PHE GLN GLU LEU ASP SEQRES 22 A 364 ALA PHE CYS SER TYR HIS VAL LYS THR ALA ILE PHE HIS SEQRES 23 A 364 MET TRP THR GLN ASP PRO GLN ASP SER GLN TRP ASP PRO SEQRES 24 A 364 ARG ASN LEU SER SER CYS PHE ASP LYS LEU LEU ALA PHE SEQRES 25 A 364 PHE LEU GLU CYS LEU ARG THR GLU LYS LEU ASP HIS TYR SEQRES 26 A 364 PHE ILE PRO LYS PHE ASN LEU PHE SER GLN GLU LEU ILE SEQRES 27 A 364 ASP ARG LYS SER LYS GLU PHE LEU SER LYS LYS ILE GLU SEQRES 28 A 364 TYR GLU ARG ASN ASN GLY PHE PRO ILE PHE ASP LYS LEU SEQRES 1 C 364 GLY THR GLY PRO ASP LYS LEU LYS LYS VAL LEU ASP LYS SEQRES 2 C 364 LEU ARG LEU LYS ARG LYS ASP ILE SER GLU ALA ALA GLU SEQRES 3 C 364 THR VAL ASN LYS VAL VAL GLU ARG LEU LEU ARG ARG MET SEQRES 4 C 364 GLN LYS ARG GLU SER GLU PHE LYS GLY VAL GLU GLN LEU SEQRES 5 C 364 ASN THR GLY SER TYR TYR GLU HIS VAL LYS ILE SER ALA SEQRES 6 C 364 PRO ASN GLU PHE ASP VAL MET PHE LYS LEU GLU VAL PRO SEQRES 7 C 364 ARG ILE GLU LEU GLN GLU TYR TYR GLU THR GLY ALA PHE SEQRES 8 C 364 TYR LEU VAL LYS PHE LYS ARG ILE PRO ARG GLY ASN PRO SEQRES 9 C 364 LEU SER HIS PHE LEU GLU GLY GLU VAL LEU SER ALA THR SEQRES 10 C 364 LYS MET LEU SER LYS PHE ARG LYS ILE ILE LYS GLU GLU SEQRES 11 C 364 VAL LYS GLU ILE LYS ASP ILE ASP VAL SER VAL GLU LYS SEQRES 12 C 364 GLU LYS PRO GLY SER PRO ALA VAL THR LEU LEU ILE ARG SEQRES 13 C 364 ASN PRO GLU GLU ILE SER VAL ASP ILE ILE LEU ALA LEU SEQRES 14 C 364 GLU SER LYS GLY SER TRP PRO ILE SER THR LYS GLU GLY SEQRES 15 C 364 LEU PRO ILE GLN GLY TRP LEU GLY THR LYS VAL ARG THR SEQRES 16 C 364 ASN LEU ARG ARG GLU PRO PHE TYR LEU VAL PRO LYS ASN SEQRES 17 C 364 ALA LYS ASP GLY ASN SER PHE GLN GLY GLU THR TRP ARG SEQRES 18 C 364 LEU SER PHE SER HIS THR GLU LYS TYR ILE LEU ASN ASN SEQRES 19 C 364 HIS GLY ILE GLU LYS THR CYS CYS GLU SER SER GLY ALA SEQRES 20 C 364 LYS CYS CYS ARG LYS GLU CYS LEU LYS LEU MET LYS TYR SEQRES 21 C 364 LEU LEU GLU GLN LEU LYS LYS GLU PHE GLN GLU LEU ASP SEQRES 22 C 364 ALA PHE CYS SER TYR HIS VAL LYS THR ALA ILE PHE HIS SEQRES 23 C 364 MET TRP THR GLN ASP PRO GLN ASP SER GLN TRP ASP PRO SEQRES 24 C 364 ARG ASN LEU SER SER CYS PHE ASP LYS LEU LEU ALA PHE SEQRES 25 C 364 PHE LEU GLU CYS LEU ARG THR GLU LYS LEU ASP HIS TYR SEQRES 26 C 364 PHE ILE PRO LYS PHE ASN LEU PHE SER GLN GLU LEU ILE SEQRES 27 C 364 ASP ARG LYS SER LYS GLU PHE LEU SER LYS LYS ILE GLU SEQRES 28 C 364 TYR GLU ARG ASN ASN GLY PHE PRO ILE PHE ASP LYS LEU SEQRES 1 E 18 DA DT DC DT DG DT DA DC DA DT DG DT DA SEQRES 2 E 18 DC DA DG DA DT SEQRES 1 F 18 DA DT DC DT DG DT DA DC DA DT DG DT DA SEQRES 2 F 18 DC DA DG DA DT SEQRES 1 I 18 DA DT DC DT DG DT DA DC DA DT DG DT DA SEQRES 2 I 18 DC DA DG DA DT SEQRES 1 J 18 DA DT DC DT DG DT DA DC DA DT DG DT DA SEQRES 2 J 18 DC DA DG DA DT HET ATP A 601 31 HET MG A 602 1 HET ZN A 603 1 HET VWX C 601 53 HET MG C 602 1 HET ZN C 603 1 HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE HETNAM MG MAGNESIUM ION HETNAM ZN ZINC ION HETNAM VWX [[(2~{R},3~{R},4~{R},5~{R})-4-[[(2~{R},3~{S},4~{R}, HETNAM 2 VWX 5~{R})-5-(6-AMINOPURIN-9-YL)-3,4-BIS(OXIDANYL)OXOLAN- HETNAM 3 VWX 2-YL]METHOXY-OXIDANYL-PHOSPHORYL]OXY-3-OXIDANYL-5-(6- HETNAM 4 VWX OXIDANYLIDENE-1~{H}-PURIN-9-YL)OXOLAN-2-YL]METHOXY- HETNAM 5 VWX OXIDANYL-PHOSPHORYL] PHOSPHONO HYDROGEN PHOSPHATE FORMUL 7 ATP C10 H16 N5 O13 P3 FORMUL 8 MG 2(MG 2+) FORMUL 9 ZN 2(ZN 2+) FORMUL 10 VWX C20 H27 N9 O20 P4 FORMUL 13 HOH *59(H2 O) HELIX 1 AA1 LYS A 149 ARG A 158 1 10 HELIX 2 AA2 LYS A 160 GLN A 183 1 24 HELIX 3 AA3 ASN A 246 LEU A 252 5 7 HELIX 4 AA4 SER A 258 GLU A 276 1 19 HELIX 5 AA5 PRO A 319 LYS A 323 5 5 HELIX 6 AA6 GLY A 333 GLU A 343 1 11 HELIX 7 AA7 PHE A 367 ASN A 377 1 11 HELIX 8 AA8 CYS A 393 LYS A 410 1 18 HELIX 9 AA9 PHE A 412 ASP A 416 5 5 HELIX 10 AB1 CYS A 419 ASP A 434 1 16 HELIX 11 AB2 GLN A 436 ARG A 443 5 8 HELIX 12 AB3 ASN A 444 THR A 462 1 19 HELIX 13 AB4 ASP A 482 ASN A 498 1 17 HELIX 14 AB5 ASN A 499 GLY A 500 5 2 HELIX 15 AB6 PHE A 501 LYS A 506 5 6 HELIX 16 AB7 LEU C 150 ARG C 158 1 9 HELIX 17 AB8 LYS C 160 LYS C 184 1 25 HELIX 18 AB9 PRO C 247 LEU C 252 5 6 HELIX 19 AC1 SER C 258 GLU C 276 1 19 HELIX 20 AC2 PRO C 319 LYS C 323 5 5 HELIX 21 AC3 GLY C 333 GLU C 343 1 11 HELIX 22 AC4 PHE C 367 ASN C 377 1 11 HELIX 23 AC5 CYS C 393 PHE C 412 1 20 HELIX 24 AC6 GLN C 413 ASP C 416 5 4 HELIX 25 AC7 CYS C 419 ASP C 434 1 16 HELIX 26 AC8 ASP C 437 ARG C 443 5 7 HELIX 27 AC9 ASN C 444 THR C 462 1 19 HELIX 28 AD1 ASP C 482 ASN C 498 1 17 HELIX 29 AD2 ASN C 499 GLY C 500 5 2 HELIX 30 AD3 PHE C 501 LYS C 506 5 6 SHEET 1 AA1 7 GLU A 193 THR A 197 0 SHEET 2 AA1 7 GLU A 211 GLU A 219 -1 O LYS A 217 N GLU A 193 SHEET 3 AA1 7 GLU A 303 SER A 314 1 O GLU A 313 N LEU A 218 SHEET 4 AA1 7 PHE A 345 VAL A 348 -1 O LEU A 347 N LEU A 312 SHEET 5 AA1 7 THR A 362 SER A 366 -1 O ARG A 364 N VAL A 348 SHEET 6 AA1 7 PHE A 234 VAL A 237 -1 N TYR A 235 O TRP A 363 SHEET 7 AA1 7 LEU A 225 GLU A 227 -1 N GLN A 226 O LEU A 236 SHEET 1 AA2 5 GLU A 193 THR A 197 0 SHEET 2 AA2 5 GLU A 211 GLU A 219 -1 O LYS A 217 N GLU A 193 SHEET 3 AA2 5 GLU A 303 SER A 314 1 O GLU A 313 N LEU A 218 SHEET 4 AA2 5 ALA A 293 ARG A 299 -1 N ILE A 298 O ILE A 304 SHEET 5 AA2 5 VAL A 282 VAL A 284 -1 N SER A 283 O LEU A 297 SHEET 1 AA3 7 GLU C 193 THR C 197 0 SHEET 2 AA3 7 GLU C 211 GLU C 219 -1 O MET C 215 N LEU C 195 SHEET 3 AA3 7 GLU C 303 SER C 314 1 O ILE C 309 N VAL C 214 SHEET 4 AA3 7 PHE C 345 VAL C 348 -1 O LEU C 347 N LEU C 312 SHEET 5 AA3 7 THR C 362 SER C 366 -1 O ARG C 364 N VAL C 348 SHEET 6 AA3 7 PHE C 234 VAL C 237 -1 N TYR C 235 O TRP C 363 SHEET 7 AA3 7 LEU C 225 GLU C 227 -1 N GLN C 226 O LEU C 236 SHEET 1 AA4 5 GLU C 193 THR C 197 0 SHEET 2 AA4 5 GLU C 211 GLU C 219 -1 O MET C 215 N LEU C 195 SHEET 3 AA4 5 GLU C 303 SER C 314 1 O ILE C 309 N VAL C 214 SHEET 4 AA4 5 ALA C 293 ARG C 299 -1 N LEU C 296 O VAL C 306 SHEET 5 AA4 5 VAL C 282 VAL C 284 -1 N SER C 283 O LEU C 297 SHEET 1 AA5 2 ASP C 466 HIS C 467 0 SHEET 2 AA5 2 ILE C 470 ASN C 474 -1 O PHE C 473 N HIS C 467 LINK OE1 GLU A 211 MG MG A 602 1555 1555 2.19 LINK OD2 ASP A 213 MG MG A 602 1555 1555 2.36 LINK NE2 HIS A 378 ZN ZN A 603 1555 1555 2.05 LINK SG CYS A 384 ZN ZN A 603 1555 1555 2.45 LINK SG CYS A 385 ZN ZN A 603 1555 1555 2.35 LINK SG CYS A 392 ZN ZN A 603 1555 1555 2.38 LINK O3G ATP A 601 MG MG A 602 1555 1555 1.95 LINK O2B ATP A 601 MG MG A 602 1555 1555 2.33 LINK O2A ATP A 601 MG MG A 602 1555 1555 2.41 LINK MG MG A 602 O HOH A 710 1555 1555 2.20 LINK OE1 GLU C 211 MG MG C 602 1555 1555 1.98 LINK OD1 ASP C 213 MG MG C 602 1555 1555 2.20 LINK NE2 HIS C 378 ZN ZN C 603 1555 1555 2.05 LINK SG CYS C 384 ZN ZN C 603 1555 1555 2.36 LINK SG CYS C 385 ZN ZN C 603 1555 1555 2.30 LINK SG CYS C 392 ZN ZN C 603 1555 1555 2.36 LINK O9 VWX C 601 MG MG C 602 1555 1555 2.53 LINK O12 VWX C 601 MG MG C 602 1555 1555 2.27 LINK O15 VWX C 601 MG MG C 602 1555 1555 2.14 LINK MG MG C 602 O HOH C 703 1555 1555 2.60 CRYST1 77.720 98.893 142.136 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012867 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010112 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007036 0.00000