HEADER TRANSFERASE/DNA 06-FEB-23 8G2Q TITLE STRUCTURE OF TERNARY COMPLEX OF MOUSE CGAS WITH DSDNA AND BOUND GTP COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYCLIC GMP-AMP SYNTHASE; COMPND 3 CHAIN: A, C; COMPND 4 SYNONYM: CGAMP SYNTHASE,CGAS,M-CGAS,2'3'-CGAMP SYNTHASE,MAB-21 COMPND 5 DOMAIN-CONTAINING PROTEIN 1; COMPND 6 EC: 2.7.7.86; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: PALINDROMIC DNA18; COMPND 11 CHAIN: E, F, I, J; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: CGAS, MB21D1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PET28; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: NHMT MCAT WT; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 13 ORGANISM_TAXID: 32630 KEYWDS IMMUNE SYSTEM/DNA, TRANSFERASE-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR S.WU,J.SOHN REVDAT 1 19-JUN-24 8G2Q 0 JRNL AUTH S.WU,J.SOHN JRNL TITL STRUCTURE OF TERNARY COMPLEX OF MOUSE CGAS WITH DSDNA AND JRNL TITL 2 BOUND GTP JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.37 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1-4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.37 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.93 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.970 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 45456 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.203 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.244 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.400 REMARK 3 FREE R VALUE TEST SET COUNT : 1999 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 28.9300 - 5.7000 1.00 3306 152 0.1757 0.2122 REMARK 3 2 5.7000 - 4.5300 1.00 3171 145 0.1770 0.2096 REMARK 3 3 4.5300 - 3.9600 1.00 3141 145 0.1733 0.2133 REMARK 3 4 3.9600 - 3.6000 1.00 3128 144 0.1914 0.2424 REMARK 3 5 3.6000 - 3.3400 1.00 3127 144 0.1943 0.2408 REMARK 3 6 3.3400 - 3.1400 1.00 3099 143 0.2145 0.2405 REMARK 3 7 3.1400 - 2.9900 1.00 3086 141 0.2478 0.2880 REMARK 3 8 2.9900 - 2.8600 1.00 3094 143 0.2407 0.2905 REMARK 3 9 2.8600 - 2.7500 1.00 3088 142 0.2450 0.3248 REMARK 3 10 2.7500 - 2.6500 1.00 3093 142 0.2465 0.3179 REMARK 3 11 2.6500 - 2.5700 1.00 3079 141 0.2585 0.3076 REMARK 3 12 2.5700 - 2.4900 1.00 3066 141 0.2441 0.2873 REMARK 3 13 2.4900 - 2.4300 1.00 3065 142 0.2459 0.2959 REMARK 3 14 2.4300 - 2.3700 0.95 2914 134 0.2649 0.3101 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.320 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.830 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 7753 REMARK 3 ANGLE : 1.086 10761 REMARK 3 CHIRALITY : 0.054 1163 REMARK 3 PLANARITY : 0.012 1091 REMARK 3 DIHEDRAL : 27.854 1524 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND ( RESID 148:507 OR RESID 604:604 ) ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.902 -27.114 -20.282 REMARK 3 T TENSOR REMARK 3 T11: 0.2311 T22: 0.2835 REMARK 3 T33: 0.2949 T12: -0.0079 REMARK 3 T13: 0.0492 T23: -0.0678 REMARK 3 L TENSOR REMARK 3 L11: 2.5206 L22: 4.1672 REMARK 3 L33: 1.9728 L12: 1.2169 REMARK 3 L13: 0.5492 L23: 0.3712 REMARK 3 S TENSOR REMARK 3 S11: -0.0188 S12: -0.0179 S13: -0.0169 REMARK 3 S21: -0.1502 S22: -0.0666 S23: 0.4342 REMARK 3 S31: 0.0589 S32: -0.1312 S33: 0.0308 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN C AND ( RESID 149:507 OR RESID 604:604 ) ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.026 7.842 -19.213 REMARK 3 T TENSOR REMARK 3 T11: 0.3214 T22: 0.3318 REMARK 3 T33: 0.2787 T12: -0.0685 REMARK 3 T13: -0.0457 T23: 0.0634 REMARK 3 L TENSOR REMARK 3 L11: 2.9267 L22: 4.7714 REMARK 3 L33: 1.8253 L12: 1.5152 REMARK 3 L13: -0.1500 L23: -0.4527 REMARK 3 S TENSOR REMARK 3 S11: -0.2543 S12: 0.2155 S13: 0.2167 REMARK 3 S21: -0.3786 S22: 0.1391 S23: -0.2931 REMARK 3 S31: -0.1190 S32: 0.1415 S33: 0.0894 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN E AND RESID 1:18 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.080 -23.411 -31.796 REMARK 3 T TENSOR REMARK 3 T11: 0.7390 T22: 0.8426 REMARK 3 T33: 0.5410 T12: 0.2522 REMARK 3 T13: -0.0358 T23: 0.0713 REMARK 3 L TENSOR REMARK 3 L11: 2.7619 L22: 1.8992 REMARK 3 L33: 3.6170 L12: 1.1522 REMARK 3 L13: -1.1588 L23: 1.4919 REMARK 3 S TENSOR REMARK 3 S11: 0.2189 S12: 1.0533 S13: 0.0752 REMARK 3 S21: -0.9199 S22: -0.0454 S23: 0.1170 REMARK 3 S31: 0.3270 S32: -0.0009 S33: -0.1572 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN F AND RESID 1:18 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.721 -24.042 -32.589 REMARK 3 T TENSOR REMARK 3 T11: 0.7141 T22: 0.9049 REMARK 3 T33: 0.5047 T12: 0.0895 REMARK 3 T13: 0.0187 T23: 0.0168 REMARK 3 L TENSOR REMARK 3 L11: 2.1270 L22: 2.7871 REMARK 3 L33: 1.6730 L12: 0.4067 REMARK 3 L13: -1.1711 L23: 0.3227 REMARK 3 S TENSOR REMARK 3 S11: 0.4183 S12: 0.8948 S13: 0.0469 REMARK 3 S21: -0.4513 S22: -0.3416 S23: -0.0251 REMARK 3 S31: -0.4698 S32: 0.8123 S33: -0.0284 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: ( CHAIN I AND RESID 1:18 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.335 8.780 -18.351 REMARK 3 T TENSOR REMARK 3 T11: 0.5203 T22: 0.5090 REMARK 3 T33: 0.7595 T12: 0.1751 REMARK 3 T13: -0.0504 T23: -0.0417 REMARK 3 L TENSOR REMARK 3 L11: 3.6913 L22: 3.1397 REMARK 3 L33: 1.6645 L12: 1.1609 REMARK 3 L13: 1.4805 L23: -1.3908 REMARK 3 S TENSOR REMARK 3 S11: 0.0613 S12: -0.2681 S13: 0.8222 REMARK 3 S21: -0.1173 S22: 0.1759 S23: 0.4321 REMARK 3 S31: -0.2858 S32: -0.8461 S33: -0.3148 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: ( CHAIN J AND RESID 1:18 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.758 6.804 -19.018 REMARK 3 T TENSOR REMARK 3 T11: 0.6446 T22: 0.7056 REMARK 3 T33: 0.6723 T12: 0.0165 REMARK 3 T13: -0.1541 T23: 0.0759 REMARK 3 L TENSOR REMARK 3 L11: 5.0677 L22: 3.6026 REMARK 3 L33: 0.9739 L12: 0.1621 REMARK 3 L13: -0.0195 L23: -1.1624 REMARK 3 S TENSOR REMARK 3 S11: -0.0574 S12: -0.7199 S13: 0.5167 REMARK 3 S21: 0.0099 S22: 0.1644 S23: 0.8022 REMARK 3 S31: 0.0931 S32: -0.4891 S33: -0.0404 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8G2Q COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-FEB-23. REMARK 100 THE DEPOSITION ID IS D_1000272107. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-MAR-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0-7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS-II REMARK 200 BEAMLINE : 17-ID-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : HORIZONTAL BOUNCE SI(111) DOUBLE REMARK 200 CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS 20210205 REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.7 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 45595 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.370 REMARK 200 RESOLUTION RANGE LOW (A) : 29.660 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : 0.08500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.37 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.45 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 6.70 REMARK 200 R MERGE FOR SHELL (I) : 0.80400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP 11.7.03 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: POLARIZES NICELY. REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.57 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM ACETATE, 32% MPD, WITH REMARK 280 0.1 M BIS-TRIS PH 6.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 39.14700 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 71.41350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 49.33750 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 71.41350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 39.14700 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 49.33750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, E, F, I, J REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 144 REMARK 465 THR A 145 REMARK 465 GLY A 146 REMARK 465 PRO A 147 REMARK 465 ARG A 241 REMARK 465 ILE A 242 REMARK 465 PRO A 243 REMARK 465 ARG A 244 REMARK 465 GLY C 144 REMARK 465 THR C 145 REMARK 465 GLY C 146 REMARK 465 PRO C 147 REMARK 465 ASP C 148 REMARK 465 LYS C 240 REMARK 465 ARG C 241 REMARK 465 ILE C 242 REMARK 465 PRO C 243 REMARK 465 ARG C 244 REMARK 465 GLY C 245 REMARK 465 ASN C 246 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 301 C - N - CD ANGL. DEV. = -22.1 DEGREES REMARK 500 DT E 12 C3' - C2' - C1' ANGL. DEV. = -5.3 DEGREES REMARK 500 DT E 12 O4' - C1' - N1 ANGL. DEV. = 2.4 DEGREES REMARK 500 DA E 15 O4' - C1' - N9 ANGL. DEV. = 3.8 DEGREES REMARK 500 DT F 12 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES REMARK 500 DC I 8 O4' - C1' - N1 ANGL. DEV. = 1.8 DEGREES REMARK 500 DC I 14 O4' - C1' - N1 ANGL. DEV. = 2.0 DEGREES REMARK 500 DT J 12 O4' - C1' - N1 ANGL. DEV. = 2.0 DEGREES REMARK 500 DC J 14 C3' - C2' - C1' ANGL. DEV. = -4.9 DEGREES REMARK 500 DC J 14 O4' - C1' - N1 ANGL. DEV. = 2.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 149 -62.14 63.09 REMARK 500 ARG A 185 -179.78 68.32 REMARK 500 GLU A 186 63.28 -69.86 REMARK 500 SER A 207 -63.31 75.57 REMARK 500 PRO A 221 -98.87 -54.19 REMARK 500 ASN A 246 126.38 -175.73 REMARK 500 GLU A 255 -29.37 67.85 REMARK 500 ASN A 300 34.96 -85.24 REMARK 500 PRO A 301 -77.22 47.48 REMARK 500 TRP A 331 -68.02 -121.54 REMARK 500 GLN C 183 -64.52 -104.87 REMARK 500 LYS C 184 3.50 -68.09 REMARK 500 GLU C 186 47.15 -71.94 REMARK 500 SER C 207 -53.76 76.09 REMARK 500 ARG C 222 -71.96 61.44 REMARK 500 ILE C 223 76.21 24.65 REMARK 500 GLU C 253 -82.97 -132.92 REMARK 500 SER C 291 129.91 -16.66 REMARK 500 ASN C 300 -79.10 -53.08 REMARK 500 TRP C 331 -64.14 -124.79 REMARK 500 ASN C 351 -127.74 -123.08 REMARK 500 ALA C 352 77.24 51.35 REMARK 500 LYS C 353 67.76 -110.82 REMARK 500 ASP C 354 -101.68 30.77 REMARK 500 SER C 357 156.94 71.99 REMARK 500 PHE C 358 -24.45 72.99 REMARK 500 GLN C 359 -53.63 -23.31 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ARG A 185 GLU A 186 149.54 REMARK 500 ASN A 300 PRO A 301 -115.63 REMARK 500 ASN C 300 PRO C 301 115.78 REMARK 500 SER C 357 PHE C 358 -147.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 603 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 211 O REMARK 620 2 GTP A 602 O2G 111.3 REMARK 620 3 HOH A 714 O 94.0 141.2 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 604 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 378 NE2 REMARK 620 2 CYS A 384 SG 108.8 REMARK 620 3 CYS A 385 SG 106.9 127.6 REMARK 620 4 CYS A 392 SG 99.9 100.2 110.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 603 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU C 211 OE1 REMARK 620 2 ASP C 213 OD2 97.3 REMARK 620 3 GTP C 602 O2G 94.2 157.4 REMARK 620 4 GTP C 602 O2B 170.3 76.6 89.2 REMARK 620 5 GTP C 602 O2A 95.6 90.4 107.7 91.9 REMARK 620 6 HOH C 730 O 87.0 76.1 85.2 84.2 166.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 604 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 378 NE2 REMARK 620 2 CYS C 384 SG 112.9 REMARK 620 3 CYS C 385 SG 107.8 124.9 REMARK 620 4 CYS C 392 SG 99.3 102.1 106.4 REMARK 620 N 1 2 3 DBREF 8G2Q A 147 507 UNP Q8C6L5 CGAS_MOUSE 147 507 DBREF 8G2Q C 147 507 UNP Q8C6L5 CGAS_MOUSE 147 507 DBREF 8G2Q E 1 18 PDB 8G2Q 8G2Q 1 18 DBREF 8G2Q F 1 18 PDB 8G2Q 8G2Q 1 18 DBREF 8G2Q I 1 18 PDB 8G2Q 8G2Q 1 18 DBREF 8G2Q J 1 18 PDB 8G2Q 8G2Q 1 18 SEQADV 8G2Q GLY A 144 UNP Q8C6L5 EXPRESSION TAG SEQADV 8G2Q THR A 145 UNP Q8C6L5 EXPRESSION TAG SEQADV 8G2Q GLY A 146 UNP Q8C6L5 EXPRESSION TAG SEQADV 8G2Q ASN A 307 UNP Q8C6L5 ASP 307 ENGINEERED MUTATION SEQADV 8G2Q GLY C 144 UNP Q8C6L5 EXPRESSION TAG SEQADV 8G2Q THR C 145 UNP Q8C6L5 EXPRESSION TAG SEQADV 8G2Q GLY C 146 UNP Q8C6L5 EXPRESSION TAG SEQADV 8G2Q ASN C 307 UNP Q8C6L5 ASP 307 ENGINEERED MUTATION SEQRES 1 A 364 GLY THR GLY PRO ASP LYS LEU LYS LYS VAL LEU ASP LYS SEQRES 2 A 364 LEU ARG LEU LYS ARG LYS ASP ILE SER GLU ALA ALA GLU SEQRES 3 A 364 THR VAL ASN LYS VAL VAL GLU ARG LEU LEU ARG ARG MET SEQRES 4 A 364 GLN LYS ARG GLU SER GLU PHE LYS GLY VAL GLU GLN LEU SEQRES 5 A 364 ASN THR GLY SER TYR TYR GLU HIS VAL LYS ILE SER ALA SEQRES 6 A 364 PRO ASN GLU PHE ASP VAL MET PHE LYS LEU GLU VAL PRO SEQRES 7 A 364 ARG ILE GLU LEU GLN GLU TYR TYR GLU THR GLY ALA PHE SEQRES 8 A 364 TYR LEU VAL LYS PHE LYS ARG ILE PRO ARG GLY ASN PRO SEQRES 9 A 364 LEU SER HIS PHE LEU GLU GLY GLU VAL LEU SER ALA THR SEQRES 10 A 364 LYS MET LEU SER LYS PHE ARG LYS ILE ILE LYS GLU GLU SEQRES 11 A 364 VAL LYS GLU ILE LYS ASP ILE ASP VAL SER VAL GLU LYS SEQRES 12 A 364 GLU LYS PRO GLY SER PRO ALA VAL THR LEU LEU ILE ARG SEQRES 13 A 364 ASN PRO GLU GLU ILE SER VAL ASN ILE ILE LEU ALA LEU SEQRES 14 A 364 GLU SER LYS GLY SER TRP PRO ILE SER THR LYS GLU GLY SEQRES 15 A 364 LEU PRO ILE GLN GLY TRP LEU GLY THR LYS VAL ARG THR SEQRES 16 A 364 ASN LEU ARG ARG GLU PRO PHE TYR LEU VAL PRO LYS ASN SEQRES 17 A 364 ALA LYS ASP GLY ASN SER PHE GLN GLY GLU THR TRP ARG SEQRES 18 A 364 LEU SER PHE SER HIS THR GLU LYS TYR ILE LEU ASN ASN SEQRES 19 A 364 HIS GLY ILE GLU LYS THR CYS CYS GLU SER SER GLY ALA SEQRES 20 A 364 LYS CYS CYS ARG LYS GLU CYS LEU LYS LEU MET LYS TYR SEQRES 21 A 364 LEU LEU GLU GLN LEU LYS LYS GLU PHE GLN GLU LEU ASP SEQRES 22 A 364 ALA PHE CYS SER TYR HIS VAL LYS THR ALA ILE PHE HIS SEQRES 23 A 364 MET TRP THR GLN ASP PRO GLN ASP SER GLN TRP ASP PRO SEQRES 24 A 364 ARG ASN LEU SER SER CYS PHE ASP LYS LEU LEU ALA PHE SEQRES 25 A 364 PHE LEU GLU CYS LEU ARG THR GLU LYS LEU ASP HIS TYR SEQRES 26 A 364 PHE ILE PRO LYS PHE ASN LEU PHE SER GLN GLU LEU ILE SEQRES 27 A 364 ASP ARG LYS SER LYS GLU PHE LEU SER LYS LYS ILE GLU SEQRES 28 A 364 TYR GLU ARG ASN ASN GLY PHE PRO ILE PHE ASP LYS LEU SEQRES 1 C 364 GLY THR GLY PRO ASP LYS LEU LYS LYS VAL LEU ASP LYS SEQRES 2 C 364 LEU ARG LEU LYS ARG LYS ASP ILE SER GLU ALA ALA GLU SEQRES 3 C 364 THR VAL ASN LYS VAL VAL GLU ARG LEU LEU ARG ARG MET SEQRES 4 C 364 GLN LYS ARG GLU SER GLU PHE LYS GLY VAL GLU GLN LEU SEQRES 5 C 364 ASN THR GLY SER TYR TYR GLU HIS VAL LYS ILE SER ALA SEQRES 6 C 364 PRO ASN GLU PHE ASP VAL MET PHE LYS LEU GLU VAL PRO SEQRES 7 C 364 ARG ILE GLU LEU GLN GLU TYR TYR GLU THR GLY ALA PHE SEQRES 8 C 364 TYR LEU VAL LYS PHE LYS ARG ILE PRO ARG GLY ASN PRO SEQRES 9 C 364 LEU SER HIS PHE LEU GLU GLY GLU VAL LEU SER ALA THR SEQRES 10 C 364 LYS MET LEU SER LYS PHE ARG LYS ILE ILE LYS GLU GLU SEQRES 11 C 364 VAL LYS GLU ILE LYS ASP ILE ASP VAL SER VAL GLU LYS SEQRES 12 C 364 GLU LYS PRO GLY SER PRO ALA VAL THR LEU LEU ILE ARG SEQRES 13 C 364 ASN PRO GLU GLU ILE SER VAL ASN ILE ILE LEU ALA LEU SEQRES 14 C 364 GLU SER LYS GLY SER TRP PRO ILE SER THR LYS GLU GLY SEQRES 15 C 364 LEU PRO ILE GLN GLY TRP LEU GLY THR LYS VAL ARG THR SEQRES 16 C 364 ASN LEU ARG ARG GLU PRO PHE TYR LEU VAL PRO LYS ASN SEQRES 17 C 364 ALA LYS ASP GLY ASN SER PHE GLN GLY GLU THR TRP ARG SEQRES 18 C 364 LEU SER PHE SER HIS THR GLU LYS TYR ILE LEU ASN ASN SEQRES 19 C 364 HIS GLY ILE GLU LYS THR CYS CYS GLU SER SER GLY ALA SEQRES 20 C 364 LYS CYS CYS ARG LYS GLU CYS LEU LYS LEU MET LYS TYR SEQRES 21 C 364 LEU LEU GLU GLN LEU LYS LYS GLU PHE GLN GLU LEU ASP SEQRES 22 C 364 ALA PHE CYS SER TYR HIS VAL LYS THR ALA ILE PHE HIS SEQRES 23 C 364 MET TRP THR GLN ASP PRO GLN ASP SER GLN TRP ASP PRO SEQRES 24 C 364 ARG ASN LEU SER SER CYS PHE ASP LYS LEU LEU ALA PHE SEQRES 25 C 364 PHE LEU GLU CYS LEU ARG THR GLU LYS LEU ASP HIS TYR SEQRES 26 C 364 PHE ILE PRO LYS PHE ASN LEU PHE SER GLN GLU LEU ILE SEQRES 27 C 364 ASP ARG LYS SER LYS GLU PHE LEU SER LYS LYS ILE GLU SEQRES 28 C 364 TYR GLU ARG ASN ASN GLY PHE PRO ILE PHE ASP LYS LEU SEQRES 1 E 18 DA DT DC DT DG DT DA DC DA DT DG DT DA SEQRES 2 E 18 DC DA DG DA DT SEQRES 1 F 18 DA DT DC DT DG DT DA DC DA DT DG DT DA SEQRES 2 F 18 DC DA DG DA DT SEQRES 1 I 18 DA DT DC DT DG DT DA DC DA DT DG DT DA SEQRES 2 I 18 DC DA DG DA DT SEQRES 1 J 18 DA DT DC DT DG DT DA DC DA DT DG DT DA SEQRES 2 J 18 DC DA DG DA DT HET GTP A 601 32 HET GTP A 602 32 HET MG A 603 1 HET ZN A 604 1 HET GTP C 601 32 HET GTP C 602 32 HET MG C 603 1 HET ZN C 604 1 HETNAM GTP GUANOSINE-5'-TRIPHOSPHATE HETNAM MG MAGNESIUM ION HETNAM ZN ZINC ION FORMUL 7 GTP 4(C10 H16 N5 O14 P3) FORMUL 9 MG 2(MG 2+) FORMUL 10 ZN 2(ZN 2+) FORMUL 15 HOH *148(H2 O) HELIX 1 AA1 LYS A 149 ARG A 158 1 10 HELIX 2 AA2 LYS A 160 LYS A 184 1 25 HELIX 3 AA3 ASN A 246 HIS A 250 5 5 HELIX 4 AA4 SER A 258 GLU A 276 1 19 HELIX 5 AA5 PRO A 319 LYS A 323 5 5 HELIX 6 AA6 GLY A 333 GLU A 343 1 11 HELIX 7 AA7 PHE A 358 GLU A 361 5 4 HELIX 8 AA8 PHE A 367 ASN A 377 1 11 HELIX 9 AA9 CYS A 393 PHE A 412 1 20 HELIX 10 AB1 GLN A 413 ASP A 416 5 4 HELIX 11 AB2 CYS A 419 ASP A 434 1 16 HELIX 12 AB3 GLN A 436 ARG A 443 5 8 HELIX 13 AB4 ASN A 444 THR A 462 1 19 HELIX 14 AB5 ASP A 482 ASN A 498 1 17 HELIX 15 AB6 ASN A 499 GLY A 500 5 2 HELIX 16 AB7 PHE A 501 LYS A 506 5 6 HELIX 17 AB8 LEU C 150 ARG C 158 1 9 HELIX 18 AB9 LYS C 160 ARG C 185 1 26 HELIX 19 AC1 LEU C 248 LEU C 252 5 5 HELIX 20 AC2 SER C 258 GLU C 276 1 19 HELIX 21 AC3 PRO C 319 LYS C 323 5 5 HELIX 22 AC4 GLY C 333 ARG C 342 1 10 HELIX 23 AC5 PHE C 358 GLY C 360 5 3 HELIX 24 AC6 PHE C 367 ASN C 377 1 11 HELIX 25 AC7 CYS C 393 PHE C 412 1 20 HELIX 26 AC8 GLN C 413 ASP C 416 5 4 HELIX 27 AC9 CYS C 419 ASP C 434 1 16 HELIX 28 AD1 GLN C 436 ARG C 443 5 8 HELIX 29 AD2 ASN C 444 GLU C 463 1 20 HELIX 30 AD3 ASP C 482 ASN C 499 1 18 HELIX 31 AD4 GLY C 500 ASP C 505 5 6 SHEET 1 AA1 7 GLU A 193 THR A 197 0 SHEET 2 AA1 7 GLU A 211 GLU A 219 -1 O MET A 215 N LEU A 195 SHEET 3 AA1 7 GLU A 303 SER A 314 1 O ILE A 309 N PHE A 216 SHEET 4 AA1 7 PHE A 345 PRO A 349 -1 O LEU A 347 N LEU A 312 SHEET 5 AA1 7 TRP A 363 SER A 366 -1 O ARG A 364 N VAL A 348 SHEET 6 AA1 7 PHE A 234 PHE A 239 -1 N TYR A 235 O TRP A 363 SHEET 7 AA1 7 ILE A 223 GLU A 227 -1 N GLN A 226 O LEU A 236 SHEET 1 AA2 5 GLU A 193 THR A 197 0 SHEET 2 AA2 5 GLU A 211 GLU A 219 -1 O MET A 215 N LEU A 195 SHEET 3 AA2 5 GLU A 303 SER A 314 1 O ILE A 309 N PHE A 216 SHEET 4 AA2 5 ALA A 293 ARG A 299 -1 N ILE A 298 O ILE A 304 SHEET 5 AA2 5 ASP A 281 VAL A 284 -1 N ASP A 281 O ARG A 299 SHEET 1 AA3 2 LEU A 252 GLU A 253 0 SHEET 2 AA3 2 VAL A 256 LEU A 257 -1 O VAL A 256 N GLU A 253 SHEET 1 AA4 7 GLU C 193 THR C 197 0 SHEET 2 AA4 7 GLU C 211 GLU C 219 -1 O MET C 215 N LEU C 195 SHEET 3 AA4 7 GLU C 303 SER C 314 1 O ASN C 307 N PHE C 212 SHEET 4 AA4 7 PHE C 345 VAL C 348 -1 O PHE C 345 N SER C 314 SHEET 5 AA4 7 THR C 362 SER C 366 -1 O ARG C 364 N VAL C 348 SHEET 6 AA4 7 PHE C 234 LYS C 238 -1 N TYR C 235 O TRP C 363 SHEET 7 AA4 7 VAL C 256 LEU C 257 -1 O LEU C 257 N VAL C 237 SHEET 1 AA5 7 LEU C 225 GLU C 227 0 SHEET 2 AA5 7 PHE C 234 LYS C 238 -1 O LEU C 236 N GLN C 226 SHEET 3 AA5 7 THR C 362 SER C 366 -1 O TRP C 363 N TYR C 235 SHEET 4 AA5 7 PHE C 345 VAL C 348 -1 N VAL C 348 O ARG C 364 SHEET 5 AA5 7 GLU C 303 SER C 314 -1 N SER C 314 O PHE C 345 SHEET 6 AA5 7 ALA C 293 ARG C 299 -1 N LEU C 296 O VAL C 306 SHEET 7 AA5 7 ASP C 281 VAL C 284 -1 N SER C 283 O LEU C 297 LINK O GLU A 211 MG MG A 603 1555 1555 2.77 LINK NE2 HIS A 378 ZN ZN A 604 1555 1555 2.00 LINK SG CYS A 384 ZN ZN A 604 1555 1555 2.30 LINK SG CYS A 385 ZN ZN A 604 1555 1555 2.33 LINK SG CYS A 392 ZN ZN A 604 1555 1555 2.35 LINK O2G GTP A 602 MG MG A 603 1555 1555 2.98 LINK MG MG A 603 O HOH A 714 1555 1555 2.89 LINK OE1 GLU C 211 MG MG C 603 1555 1555 2.15 LINK OD2 ASP C 213 MG MG C 603 1555 1555 2.40 LINK NE2 HIS C 378 ZN ZN C 604 1555 1555 2.16 LINK SG CYS C 384 ZN ZN C 604 1555 1555 2.31 LINK SG CYS C 385 ZN ZN C 604 1555 1555 2.32 LINK SG CYS C 392 ZN ZN C 604 1555 1555 2.37 LINK O2G GTP C 602 MG MG C 603 1555 1555 2.18 LINK O2B GTP C 602 MG MG C 603 1555 1555 2.32 LINK O2A GTP C 602 MG MG C 603 1555 1555 2.04 LINK MG MG C 603 O HOH C 730 1555 1555 2.27 CRYST1 78.294 98.675 142.827 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012772 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010134 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007001 0.00000