HEADER RNA BINDING PROTEIN/RNA 20-FEB-23 8G90 TITLE LAM DOMAIN OF HUMAN LARP1 IN COMPLEX WITH SP PHOSPHOROTHIOATE ISOMER TITLE 2 OF AAAAA(SRA) RNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: ISOFORM 2 OF LA-RELATED PROTEIN 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 323-410; COMPND 5 SYNONYM: LA RIBONUCLEOPROTEIN DOMAIN FAMILY MEMBER 1; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: RNA (5'-R(*AP*AP*AP*AP*AP*(SRA))-3'); COMPND 9 CHAIN: B; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: LARP1, KIAA0731, LARP; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 11 ORGANISM_TAXID: 32630 KEYWDS WINGED HELIX FOLD, RNA BINDING DOMAIN, RNA BINDING PROTEIN, RNA KEYWDS 2 BINDING PROTEIN-RNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR G.KOZLOV,J.JIANG,K.GEHRING REVDAT 2 30-OCT-24 8G90 1 JRNL REVDAT 1 17-APR-24 8G90 0 JRNL AUTH G.KOZLOV,J.JIANG,T.RUTHERFORD,A.M.NORONHA,C.J.WILDS, JRNL AUTH 2 K.GEHRING JRNL TITL ENHANCED BINDING OF GUANYLATED POLY(A) RNA BY THE LAM DOMAIN JRNL TITL 2 OF LARP1. JRNL REF RNA BIOL. V. 21 7 2024 JRNL REFN ESSN 1555-8584 JRNL PMID 39016322 JRNL DOI 10.1080/15476286.2024.2379121 REMARK 2 REMARK 2 RESOLUTION. 1.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19_4092 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.02 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.410 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.9 REMARK 3 NUMBER OF REFLECTIONS : 31018 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.192 REMARK 3 FREE R VALUE : 0.210 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1550 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 26.0200 - 2.6700 0.89 2688 134 0.1938 0.2224 REMARK 3 2 2.6700 - 2.1200 1.00 2859 158 0.1845 0.1901 REMARK 3 3 2.1200 - 1.8500 1.00 2809 163 0.1791 0.2070 REMARK 3 4 1.8500 - 1.6800 1.00 2829 148 0.1791 0.1880 REMARK 3 5 1.6800 - 1.5600 1.00 2808 147 0.1757 0.1802 REMARK 3 6 1.5600 - 1.4700 1.00 2849 122 0.1873 0.2008 REMARK 3 7 1.4700 - 1.4000 1.00 2763 156 0.1974 0.2058 REMARK 3 8 1.4000 - 1.3400 1.00 2782 157 0.2036 0.2275 REMARK 3 9 1.3400 - 1.2800 0.98 2740 123 0.2344 0.2955 REMARK 3 10 1.2800 - 1.2400 0.88 2409 134 0.2668 0.2528 REMARK 3 11 1.2400 - 1.2000 0.70 1932 108 0.2748 0.3010 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.123 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.775 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 12.52 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.54 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 838 REMARK 3 ANGLE : 0.937 1149 REMARK 3 CHIRALITY : 0.077 132 REMARK 3 PLANARITY : 0.006 134 REMARK 3 DIHEDRAL : 9.208 135 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 323 THROUGH 337 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.9019 -5.4101 -3.3783 REMARK 3 T TENSOR REMARK 3 T11: 0.1054 T22: 0.1313 REMARK 3 T33: 0.0939 T12: 0.0185 REMARK 3 T13: -0.0086 T23: -0.0100 REMARK 3 L TENSOR REMARK 3 L11: 0.4313 L22: 0.3327 REMARK 3 L33: 0.5084 L12: -0.1303 REMARK 3 L13: 0.1281 L23: -0.0331 REMARK 3 S TENSOR REMARK 3 S11: -0.0158 S12: 0.0652 S13: -0.0076 REMARK 3 S21: -0.1423 S22: -0.0880 S23: 0.0533 REMARK 3 S31: -0.1811 S32: -0.0981 S33: -0.0283 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 338 THROUGH 343 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.6249 6.6158 5.9052 REMARK 3 T TENSOR REMARK 3 T11: 0.2064 T22: 0.1361 REMARK 3 T33: 0.1370 T12: 0.0414 REMARK 3 T13: -0.0133 T23: -0.0134 REMARK 3 L TENSOR REMARK 3 L11: 0.0356 L22: 0.2062 REMARK 3 L33: 0.0918 L12: 0.0343 REMARK 3 L13: 0.0253 L23: -0.0220 REMARK 3 S TENSOR REMARK 3 S11: 0.1890 S12: 0.0959 S13: 0.2347 REMARK 3 S21: -0.3161 S22: -0.2019 S23: -0.1413 REMARK 3 S31: -0.3611 S32: -0.1541 S33: -0.0130 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 344 THROUGH 351 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.0317 4.2874 14.4162 REMARK 3 T TENSOR REMARK 3 T11: 0.1393 T22: 0.1282 REMARK 3 T33: 0.1189 T12: 0.0079 REMARK 3 T13: 0.0009 T23: -0.0395 REMARK 3 L TENSOR REMARK 3 L11: 0.1284 L22: 0.1614 REMARK 3 L33: 0.0831 L12: 0.0114 REMARK 3 L13: 0.0023 L23: 0.0789 REMARK 3 S TENSOR REMARK 3 S11: 0.0468 S12: -0.1465 S13: 0.0986 REMARK 3 S21: 0.1182 S22: -0.1126 S23: 0.0174 REMARK 3 S31: -0.0507 S32: -0.1540 S33: -0.0144 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 352 THROUGH 360 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.9870 2.1904 12.0449 REMARK 3 T TENSOR REMARK 3 T11: 0.1472 T22: 0.1333 REMARK 3 T33: 0.2184 T12: -0.0017 REMARK 3 T13: 0.0088 T23: -0.0470 REMARK 3 L TENSOR REMARK 3 L11: 0.0856 L22: 0.0829 REMARK 3 L33: 0.1877 L12: -0.1451 REMARK 3 L13: 0.0404 L23: -0.0329 REMARK 3 S TENSOR REMARK 3 S11: -0.0229 S12: -0.2875 S13: 0.2385 REMARK 3 S21: 0.1057 S22: 0.2230 S23: -0.5074 REMARK 3 S31: -0.0221 S32: 0.1945 S33: 0.0369 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 361 THROUGH 376 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.8112 -10.1516 6.0968 REMARK 3 T TENSOR REMARK 3 T11: 0.0911 T22: 0.1254 REMARK 3 T33: 0.1085 T12: 0.0012 REMARK 3 T13: 0.0000 T23: -0.0150 REMARK 3 L TENSOR REMARK 3 L11: 0.2726 L22: 0.3531 REMARK 3 L33: 0.3158 L12: 0.1976 REMARK 3 L13: 0.5238 L23: 0.0606 REMARK 3 S TENSOR REMARK 3 S11: 0.0560 S12: 0.0301 S13: -0.0926 REMARK 3 S21: 0.0775 S22: -0.0526 S23: -0.0030 REMARK 3 S31: 0.0885 S32: -0.0261 S33: -0.0001 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 377 THROUGH 385 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.8833 -8.9934 -1.5306 REMARK 3 T TENSOR REMARK 3 T11: 0.0806 T22: 0.1281 REMARK 3 T33: 0.1395 T12: 0.0067 REMARK 3 T13: -0.0106 T23: -0.0116 REMARK 3 L TENSOR REMARK 3 L11: 0.1491 L22: 0.6685 REMARK 3 L33: 0.9746 L12: 0.2306 REMARK 3 L13: 0.0673 L23: 0.5583 REMARK 3 S TENSOR REMARK 3 S11: 0.1673 S12: 0.1081 S13: 0.1002 REMARK 3 S21: 0.1526 S22: -0.0223 S23: -0.1336 REMARK 3 S31: 0.2724 S32: 0.0865 S33: 0.0133 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 386 THROUGH 393 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.3026 1.5879 -0.9617 REMARK 3 T TENSOR REMARK 3 T11: 0.2609 T22: 0.2259 REMARK 3 T33: 0.1979 T12: 0.0435 REMARK 3 T13: 0.0501 T23: 0.0045 REMARK 3 L TENSOR REMARK 3 L11: 0.1512 L22: 0.1086 REMARK 3 L33: 0.0272 L12: -0.0577 REMARK 3 L13: 0.0064 L23: -0.0451 REMARK 3 S TENSOR REMARK 3 S11: 0.5758 S12: 0.6991 S13: 0.1299 REMARK 3 S21: -0.6270 S22: -0.3489 S23: -0.3851 REMARK 3 S31: 0.0689 S32: 0.5473 S33: -0.0002 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 394 THROUGH 399 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.5094 0.3292 5.5574 REMARK 3 T TENSOR REMARK 3 T11: 0.1500 T22: 0.1387 REMARK 3 T33: 0.1859 T12: -0.0008 REMARK 3 T13: 0.0129 T23: -0.0239 REMARK 3 L TENSOR REMARK 3 L11: 0.0760 L22: 0.0219 REMARK 3 L33: 0.2691 L12: -0.0010 REMARK 3 L13: -0.1642 L23: 0.0733 REMARK 3 S TENSOR REMARK 3 S11: 0.0758 S12: 0.1114 S13: 0.1432 REMARK 3 S21: -0.0597 S22: -0.0102 S23: -0.2322 REMARK 3 S31: -0.2828 S32: 0.3616 S33: 0.0113 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 400 THROUGH 405 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.9084 10.4824 5.0296 REMARK 3 T TENSOR REMARK 3 T11: 0.3511 T22: 0.1556 REMARK 3 T33: 0.2402 T12: -0.0693 REMARK 3 T13: 0.0694 T23: -0.0294 REMARK 3 L TENSOR REMARK 3 L11: 0.0065 L22: 0.1600 REMARK 3 L33: 1.8975 L12: 0.0537 REMARK 3 L13: 0.0334 L23: 0.4846 REMARK 3 S TENSOR REMARK 3 S11: -0.0794 S12: -0.0977 S13: 0.2552 REMARK 3 S21: -0.1524 S22: -0.2705 S23: 0.1661 REMARK 3 S31: -0.3910 S32: 0.4596 S33: -0.0329 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 406 THROUGH 410 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.2946 7.8376 16.6229 REMARK 3 T TENSOR REMARK 3 T11: 0.1561 T22: 0.1161 REMARK 3 T33: 0.1595 T12: -0.0080 REMARK 3 T13: -0.0125 T23: -0.0352 REMARK 3 L TENSOR REMARK 3 L11: 0.4523 L22: 0.3781 REMARK 3 L33: 0.2488 L12: 0.2632 REMARK 3 L13: -0.1640 L23: -0.2276 REMARK 3 S TENSOR REMARK 3 S11: 0.0534 S12: -0.2854 S13: -0.1296 REMARK 3 S21: 0.2541 S22: -0.1495 S23: -0.3107 REMARK 3 S31: -0.2159 S32: 0.1440 S33: 0.0071 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID -4 THROUGH -2 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.7007 -2.6071 10.4440 REMARK 3 T TENSOR REMARK 3 T11: 0.1704 T22: 0.2946 REMARK 3 T33: 0.2549 T12: 0.0477 REMARK 3 T13: 0.0394 T23: -0.0682 REMARK 3 L TENSOR REMARK 3 L11: 0.0523 L22: 0.8884 REMARK 3 L33: 0.1984 L12: 0.1581 REMARK 3 L13: 0.0547 L23: 0.3946 REMARK 3 S TENSOR REMARK 3 S11: -0.0524 S12: -0.3755 S13: -0.0715 REMARK 3 S21: 0.5419 S22: -0.1138 S23: 0.7365 REMARK 3 S31: -0.1736 S32: -0.7386 S33: 0.0047 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8G90 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-MAR-23. REMARK 100 THE DEPOSITION ID IS D_1000272387. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-JUL-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95371 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31018 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.200 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.2 REMARK 200 DATA REDUNDANCY : 8.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 35.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.22 REMARK 200 COMPLETENESS FOR SHELL (%) : 67.7 REMARK 200 DATA REDUNDANCY IN SHELL : 2.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 33.77 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.86 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BIS-TRIS PH 6.5, 28% (W/V) PEG REMARK 280 2000 MME, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 18.47550 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 29.63800 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 23.32300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 29.63800 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 18.47550 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 23.32300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1380 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 5260 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 312 REMARK 465 GLY A 313 REMARK 465 SER A 314 REMARK 465 SER A 315 REMARK 465 HIS A 316 REMARK 465 HIS A 317 REMARK 465 HIS A 318 REMARK 465 HIS A 319 REMARK 465 HIS A 320 REMARK 465 HIS A 321 REMARK 465 SER A 322 REMARK 465 A B -6 REMARK 465 A B -5 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 344 CD OE1 OE2 REMARK 470 ASP A 386 CG OD1 OD2 REMARK 470 LYS A 388 CD CE NZ REMARK 470 LYS A 396 CE NZ REMARK 470 GLU A 402 CG CD OE1 OE2 REMARK 470 GLU A 404 CG CD OE1 OE2 REMARK 470 A B -4 P OP1 OP2 REMARK 470 A B -3 N9 C8 N7 C5 C6 N6 N1 REMARK 470 A B -3 C2 N3 C4 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 552 O HOH A 574 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 394 -113.77 49.64 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 606 DISTANCE = 5.99 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 8EY6 RELATED DB: PDB REMARK 900 RELATED ID: 8EY7 RELATED DB: PDB REMARK 900 RELATED ID: 8EY8 RELATED DB: PDB REMARK 900 RELATED ID: 7SOW RELATED DB: PDB DBREF1 8G90 A 323 410 UNP LARP1-3_HUMAN DBREF2 8G90 A Q6PKG0-3 323 410 DBREF 8G90 B -6 -1 PDB 8G90 8G90 -6 -1 SEQADV 8G90 MET A 312 UNP Q6PKG0-3 INITIATING METHIONINE SEQADV 8G90 GLY A 313 UNP Q6PKG0-3 EXPRESSION TAG SEQADV 8G90 SER A 314 UNP Q6PKG0-3 EXPRESSION TAG SEQADV 8G90 SER A 315 UNP Q6PKG0-3 EXPRESSION TAG SEQADV 8G90 HIS A 316 UNP Q6PKG0-3 EXPRESSION TAG SEQADV 8G90 HIS A 317 UNP Q6PKG0-3 EXPRESSION TAG SEQADV 8G90 HIS A 318 UNP Q6PKG0-3 EXPRESSION TAG SEQADV 8G90 HIS A 319 UNP Q6PKG0-3 EXPRESSION TAG SEQADV 8G90 HIS A 320 UNP Q6PKG0-3 EXPRESSION TAG SEQADV 8G90 HIS A 321 UNP Q6PKG0-3 EXPRESSION TAG SEQADV 8G90 SER A 322 UNP Q6PKG0-3 EXPRESSION TAG SEQRES 1 A 99 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER GLN GLU SEQRES 2 A 99 LEU LEU LYS ASP TYR ILE LYS ARG GLN ILE GLU TYR TYR SEQRES 3 A 99 PHE SER VAL ASP ASN LEU GLU ARG ASP PHE PHE LEU ARG SEQRES 4 A 99 ARG LYS MET ASP ALA ASP GLY PHE LEU PRO ILE THR LEU SEQRES 5 A 99 ILE ALA SER PHE HIS ARG VAL GLN ALA LEU THR THR ASP SEQRES 6 A 99 ILE SER LEU ILE PHE ALA ALA LEU LYS ASP SER LYS VAL SEQRES 7 A 99 VAL GLU ILE VAL ASP GLU LYS VAL ARG ARG ARG GLU GLU SEQRES 8 A 99 PRO GLU LYS TRP PRO LEU PRO PRO SEQRES 1 B 6 A A A A A SRA HET SRA B -1 22 HETNAM SRA ADENOSINE -5'-THIO-MONOPHOSPHATE FORMUL 2 SRA C10 H14 N5 O6 P S FORMUL 3 HOH *115(H2 O) HELIX 1 AA1 GLN A 323 PHE A 338 1 16 HELIX 2 AA2 SER A 339 GLU A 344 1 6 HELIX 3 AA3 ASP A 346 LYS A 352 1 7 HELIX 4 AA4 ILE A 361 SER A 366 1 6 HELIX 5 AA5 PHE A 367 THR A 374 1 8 HELIX 6 AA6 ASP A 376 ASP A 386 1 11 HELIX 7 AA7 GLU A 402 TRP A 406 5 5 SHEET 1 AA1 3 LEU A 359 PRO A 360 0 SHEET 2 AA1 3 LYS A 396 ARG A 399 -1 O VAL A 397 N LEU A 359 SHEET 3 AA1 3 VAL A 390 VAL A 393 -1 N VAL A 393 O LYS A 396 LINK O3' A B -2 P SRA B -1 1555 1555 1.55 CRYST1 36.951 46.646 59.276 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.027063 0.000000 0.000000 0.00000 SCALE2 0.000000 0.021438 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016870 0.00000